CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP040558	Pseudoalteromonas sp. 16-SW-7 chromosome L1, complete sequence	2 crisprs	WYL,DEDDh,DinG,csx1,cas3,csa3	0	0	2	0
NZ_CP040559	Pseudoalteromonas sp. 16-SW-7 chromosome S1, complete sequence	1 crisprs	DinG,WYL,csa3,cas3	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP040558_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040558_1

2128784-2128890

Orphan

Consensus_repeat	Method
GCTAAAAAAGCAGCTAAAGCATTAGAAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040558_1

>merge|NZ_CP040558|1|2128784-2128890|CRISPRCasFinder
GCTAAAAAAGCAGCTAAAGCATTAGAAGAAACCGAGCAAACCACAAGTGAAGAGCCACAAAGCGATACGCCTGCTGATGCTAAAAAAGCAGCTAAAGCACTAGAAGA

>NZ_CP040558|1|1|2128784-2128890|CRISPRCasFinder
GCTAAAAAAGCAGCTAAAGCATTAGAAGA	AACCGAGCAAACCACAAGTGAAGAGCCACAAAGCGATACGCCTGCTGAT
GCTAAAAAAGCAGCTAAAGCACTAGAAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040558.1\|WP_138489355.1\|2117365_2118304_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|287624
NZ_CP040558.1\|WP_138489359.1\|2130143_2130785_+\|electron-transport-complex-subunit-RsxG	unknown	unknown	gnl\|CDD\|179350
NZ_CP040558.1\|WP_084298557.1\|2132332_2132530_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040558.1\|WP_138489364.1\|2146639_2147602_-\|class-1-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236458
NZ_CP040558.1\|WP_010553668.1\|2115313_2115556_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|132023
NZ_CP040558.1\|WP_138489361.1\|2132785_2133787_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040558.1\|WP_138489363.1\|2143455_2146188_-\|poly(beta-D-mannuronate)-lyase	unknown	unknown	gnl\|CDD\|271210
NZ_CP040558.1\|WP_138489362.1\|2140097_2143130_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273804
NZ_CP040558.1\|WP_033021837.1\|2134328_2136239_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|224893
NZ_CP040558.1\|WP_007378935.1\|2114666_2115116_-\|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224931
NZ_CP040558.1\|WP_138489356.1\|2120297_2121677_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240554
NZ_CP040558.1\|WP_010553676.1\|2130781_2131480_+\|electron-transport-complex-subunit-E	unknown	unknown	gnl\|CDD\|237091
NZ_CP040558.1\|WP_138489360.1\|2131529_2132162_+\|endonuclease-III	unknown	unknown	gnl\|CDD\|182661
NZ_CP040558.1\|WP_007585357.1\|2125994_2126549_+\|electron-transport-complex-subunit-RsxB	unknown	unknown	gnl\|CDD\|235347
NZ_CP040558.1\|WP_039487283.1\|2123255_2125199_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|376350
NZ_CP040558.1\|WP_039487290.1\|2118306_2120301_-\|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl\|CDD\|235395
NZ_CP040558.1\|WP_138489354.1\|2116684_2117365_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225258
NZ_CP040558.1\|WP_138489358.1\|2129088_2130147_+\|electron-transport-complex-subunit-RsxD	unknown	unknown	gnl\|CDD\|234844
NZ_CP040558.1\|WP_138489353.1\|2115560_2116583_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040558.1\|WP_008172491.1\|2125411_2125993_+\|electron-transport-complex-subunit-RsxA	unknown	unknown	gnl\|CDD\|235352

Protein	Function_ID	Function_description	E-value
NZ_CP040558.1\|WP_138489355.1\|2117365_2118304_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|287624	pfam10672, Methyltrans_SAM, S-adenosylmethionine-dependent methyltransferase. Members of this family are S-adenosylmethionine-dependent methyltransferases from gamma-proteobacterial species. The diversity in the roles of methylation is matched by the almost bewildering number of methyltransferase enzymes that catalyze the methylation reaction. Although several classes of methyltransferase enzymes are known, the great majority of methylation reactions are catalyzed by the S-adenosylmethionine-dependent methyltransferases.	7.32326e-95
NZ_CP040558.1\|WP_138489363.1\|2143455_2146188_-\|poly(beta-D-mannuronate)-lyase	gnl\|CDD\|271210	cd14251, PL-6, Polysaccharide Lyase Family 6. Polysaccharide Lyase Family 6 is a family of beta-helical polysaccharide lyases. Members include alginate lyase (EC 4.2.2.3) and chondroitinase B (EC 4.2.2.19). Chondroitinase B is an enzyme that only cleaves the beta-(1,4)-linkage of dermatan sulfate (DS), leading to 4,5-unsaturated dermatan sulfate disaccharides as the product. DS is a highly sulfated, unbranched polysaccharide belonging to a family of glycosaminoglycans (GAGs) composed of alternating hexosamine (gluco- or galactosamine) and uronic acid (D-glucuronic or L-iduronic acid) moieties. DS contains alternating 1,4-beta-D-galactosamine (GalNac) and 1,3-alpha-L-iduronic acid units. The related chondroitin sulfate (CS) contains alternating GalNac and 1,3-beta-D-glucuronic acid units. Alginate lyases (known as either mannuronate (EC 4.2.2.3) or guluronate lyases (EC 4.2.2.11) catalyze the degradation of alginate, a copolymer of alpha-L-guluronate and its C5 epimer beta-D-mannuronate.	1.3003e-30
NZ_CP040558.1\|WP_033021837.1\|2134328_2136239_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|224893	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism].	9.69688e-124
NZ_CP040558.1\|WP_138489354.1\|2116684_2117365_-\|hypothetical-protein	gnl\|CDD\|225258	COG2384, COG2384, Predicted SAM-dependent methyltransferase [General function prediction only].	1.4742e-33
NZ_CP040558.1\|WP_010553668.1\|2115313_2115556_+\|hypothetical-protein	gnl\|CDD\|132023	TIGR02978, Phage_shock_protein_C., phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects. [Cellular processes, Adaptations to atypical conditions].	0.000221656
NZ_CP040558.1\|WP_138489364.1\|2146639_2147602_-\|class-1-fructose-bisphosphatase	gnl\|CDD\|236458	PRK09293, PRK09293, class 1 fructose-bisphosphatase.	2.15262e-139
NZ_CP040558.1\|WP_138489362.1\|2140097_2143130_-\|TonB-dependent-receptor	gnl\|CDD\|273804	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor. This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins].	2.31902e-120
NZ_CP040558.1\|WP_007378935.1\|2114666_2115116_-\|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	1.73603e-21
NZ_CP040558.1\|WP_138489356.1\|2120297_2121677_-\|MATE-family-efflux-transporter	gnl\|CDD\|240554	cd13149, MATE_like_2, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	1.29506e-158
NZ_CP040558.1\|WP_138489360.1\|2131529_2132162_+\|endonuclease-III	gnl\|CDD\|182661	PRK10702, PRK10702, endonuclease III; Provisional.	2.22177e-126
NZ_CP040558.1\|WP_138489359.1\|2130143_2130785_+\|electron-transport-complex-subunit-RsxG	gnl\|CDD\|179350	PRK01908, PRK01908, electron transport complex protein RnfG; Validated.	6.90902e-92
NZ_CP040558.1\|WP_039487283.1\|2123255_2125199_+\|GGDEF-domain-containing-protein	gnl\|CDD\|376350	pfam00563, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.	3.06266e-48
NZ_CP040558.1\|WP_039487290.1\|2118306_2120301_-\|excinuclease-ABC-subunit-UvrB	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP040558.1\|WP_007585357.1\|2125994_2126549_+\|electron-transport-complex-subunit-RsxB	gnl\|CDD\|235347	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional.	1.03301e-124
NZ_CP040558.1\|WP_138489358.1\|2129088_2130147_+\|electron-transport-complex-subunit-RsxD	gnl\|CDD\|234844	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed.	0
NZ_CP040558.1\|WP_010553676.1\|2130781_2131480_+\|electron-transport-complex-subunit-E	gnl\|CDD\|237091	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional.	3.49048e-131
NZ_CP040558.1\|WP_008172491.1\|2125411_2125993_+\|electron-transport-complex-subunit-RsxA	gnl\|CDD\|235352	PRK05151, PRK05151, electron transport complex protein RsxA; Provisional.	3.56038e-115

>NZ_CP040558.1|WP_007585357.1|2125994_2126549_+|electron-transport-complex-subunit-RsxB
MTLFYALIAIGSLALIFGLILGFAAIRFRVEGNPIVEQIDTILPQTQCGQCGYPGCRPYAEAIANGDEINKCPPGGESTMKKLAGLMGVDEKPLAGGEQAEPIKTVAYIREDECIGCTKCIQACPVDAILGATRQMHTVLIDECTGCDLCVEPCPVDCIDMLPVAETKQNWKWQLDAIPVTQID
>NZ_CP040558.1|WP_008172491.1|2125411_2125993_+|electron-transport-complex-subunit-RsxA
MTEYVLLLIGTVLVNNFVLVQFLGLCPFMGVSGKLDTAIGMSLATTFVLTLASVTSYLVNQYILIPLDIAFLRTMSFILVIAVVVQFTEMVVRKTSPTLYRLLGIFLPLITTNCAVLGVALLNIKEDHSFLQSAVYGFGAAVGFSLVLVLFAALRERLAAADVPTPFKGASIAMITAGLMSMAFMGFTGLVKF
>NZ_CP040558.1|WP_039487283.1|2123255_2125199_+|GGDEF-domain-containing-protein
MAGFKKLIFIQIISWLLCVAAGSYFISISFDTAVSDAQKNAQTTVTKYINDLSLDDISAQNLKQSIADGNTFSSFTLRDYQGAEVFSINPPTQLPMFADFVLSNFNSVRPQFAVNDAADIKVEFVLNIEHLASQLQTSLFIVILISAILVIIPIILMKSIFYHLNKNISTTVADIIDIYINQNQLDNDLETALDGTRLKKMGKDLVPSFNRLSHFLKNKNEDIQSAAMTIKHEAYKDVITSLGNRNMFVEYYEKNIENTEQSTFGSLAMVRCSELQAINQSRGYQKGDEYVKGVADIIKHISGTYTGSQVFRLNSSDFAVVLPHIPLKEAERFGENLQSRFTQYQQNQELSSVANTGIVGYEKGKPLGELLSVVDNAMSMAQSKQVNAWHVQRETDLVNNVSAGFGNQNWRKVIKEVIESKRVHLVMQNIMPLGKSIKAYAEVQVRFKTEDNQVLPTASFLAMAEKLDMAIEIDRLIIDSSLEKVKSRNLSEKFFGLNVTASSAHNDQFVIWLERRLLKDTHIASKLVFEVSEFGLQQNIKASKRFIDMVHRVGARVTVERFGVGLTSFKFFRDLKPDFIKMDASYTRGLEDDKNNQYFMRLMVDLAHRIGVSVFAEGVESQEEKHIIETLCLDGVQGYYIEKPKDI
>NZ_CP040558.1|WP_138489356.1|2120297_2121677_-|MATE-family-efflux-transporter
MRAISKSQTRPDLLNDPILPTLKTMTIPMIFGMITLMMFNIVDTFFISLLGTEPLAAVSFTFPVTFTVISLAIGLGIGTSAVIAKALGSNKIDEARFDASISLMVGVVLVIVLSSVGYLLIDPIFTLLGAGAQVLPLIHEYMNVWFIGSVFLITPMIGNSVLRASGDTKTPSIVMGGAGLINAVLDPILIFGFGPVPALGIQGAAIASVVAWSVAVVIILYILAVKKRLLSLKAGKQTVTGAIRKILKIGLPAAGANMLTPVAMAVMTALVAHHGPEAVAAFGVGSRIESIASILVLALSMTLPPFVSQNFGAGKLCRVKEAYTGTLKFVMVWQFAIYVLLIAFSGVISQLFGKEQAVIDVIKLFIYTIPLSYGLQGVIILSNSSFNALHKPMNALVLSVIRLFIFYVPFAYIGNEIAGLLGLFIGAAIGNLFTAIVAYKWFMKKLEALSGESLQECNN
>NZ_CP040558.1|WP_039487290.1|2118306_2120301_-|excinuclease-ABC-subunit-UvrB
MSDHFQLKSHFKPAGDQPTAIKQLCEGLEAGLAHQTLLGATGTGKTFTMANIISDLNRPTIIMAHNKTLAAQLYGEMKEFFPKNAVEYFVSYYDYYQPEAYVVSSDTFIEKDASINEHIEQMRLSATKALLERRDTIIVASVSAIYGLGDPKSYMKMMLLLKVGEKVDQRDMLRRLAEIQYTRNDIDFSRGTYRVRGEVVDIFPAESDTFAVRVEMFDDEIERLSIFDPLTGAIEKHIVRATIYPKTHYVTPREKILGAIEKIKEELKERRAQLLSANKLVEEQRVAQRTQYDIEMMTELGYCSGIENYSRYLSGRTPGDPPPTLLDYLPDDALMIIDESHVTVSQIGAMYKGDRSRKENLVEYGFRMPSAMDNRPLRFEEFEAIAPQTIYVSATPGDFELERCAGEIAEQVIRPTGLLDPLIEVRPVGDQVDDLLSEIYKSVEKGERVLVTTLTKRMSEDLTDYLSEHNVKVRYLHSDIDTVERVEIIRDLRAGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSARSLIQTIGRAARHLDGRAILYGDRITKSMAKAMDETARRREIQHAYNVEHGIEPHALAKKILDVMDVGEEAAPKDNLKLIRKESKKVLSAKEIAVQIKQLETKMHAYASDLEFEKAGSVRDEIHELQQQLIN
>NZ_CP040558.1|WP_138489355.1|2117365_2118304_-|methyltransferase-domain-containing-protein
MTANFTPLITALEDAPILKNELCRVFHGRGHSVEALSHINLDFYPPSLFLVSYDEIDEQTLSELTNVVWQWAQENQPELITSLVYQQRAGVQSQNTVVYGQLPNPHVVTENGIRFLVDLQSRQNTGIFPDMRSGREFVMANSKHGKVLNLFSYTCGFSLAAMQGGADHVMNMDMSKGVLKVGKQNHQLNGFERGVSFLPHDILKSFGKLKKAAPFDLIIVDPPSFQKGSFILTKDYQKVLRRLPELLCDTTQLLLCANSPELSEDAFKALINENTQGAIEFVERLAPTERFIEVDSDKSLKALVYKTSQIPA
>NZ_CP040558.1|WP_138489354.1|2116684_2117365_-|hypothetical-protein
MKLSKRLTAIDTLISQHHDIIWDCCCDHGYLGMALLKRAAANHVIFVDIVATLMNDLEAQLSSINKLQKTCDKNPQWQVLCQDVGKIEIAQSKSQVVVIAGVGGELLLSLVQQIIANNAVEHLNNVRFILCPVHHTYKLRVGLKQLGLGLISEQIVYDNKRFYEVIEVSFSTNNGISHTGKKMWDFASTEHVMYQRQLINHYNKMLNKDKPYYQKVITDYQELTDS
>NZ_CP040558.1|WP_138489353.1|2115560_2116583_-|hypothetical-protein
MSDNKSHINHLLSNEQKWQHSYEQPISYAPLVQLANSNWVVPQHFLRYKHTLQSVNEVLESIEFSAHFRVLAAQKGEEIYLQVAVLSPDNYQKSASTNEVKAKKLLFGRRWIVEENLPTSELIQTAFLALKVAREHEVRELFQLMQSGATSTPFNNHHDLPVMAQNPELVKSEAVTSNVDEVLKRIVFAGKSIELKSQQQVAEQHLYTVELLCEDCQLSEFNKKTIAFLTADSSANSFLHGLIAALVATSNDYVNEQFKYKGFARFSKHVAVEQIGNLSIAMRSPSTVGLCSMGKQHANQLNFEIDSGRAPQGCGQAIGGFLAAHGIEQPENAHLYPNYL
>NZ_CP040558.1|WP_010553668.1|2115313_2115556_+|hypothetical-protein
MSGTTMIVLIVLISVGSGVVYDMYKKHLEFKHKMQNNNSDAHKQLAETNAQVLALKERVQTLEAIVTDSSFNVKDEINKL
>NZ_CP040558.1|WP_007378935.1|2114666_2115116_-|isoprenylcysteine-carboxylmethyltransferase-family-protein
MLNNKIPPVIVVLFFAGIMALIAHYSVIDFTAFITYLAASLVIIGCVFCIAGVASFKIANTTVNPNKPEQASKLITSGIYKISRNPMYVGFAFILAGWGVWLSSLWALLCIIGFIAYLTFFQIIPEERALTKLFGEEFTAYKARVKRWL
>NZ_CP040558.1|WP_138489358.1|2129088_2130147_+|electron-transport-complex-subunit-RsxD
MKLTMASSPHNHSHKSLTRLMLSVIAACIPGLIAQVFFFGTGVLIQLVLALVAVSVFEAAIMLIRKRPVWPALSDGSAWLTAVLLALSIPPLAPWWIIVIGCLFSIVIVKQLYGGLGFNLFNPAMAAYVLLLVSFPVQMTAWLPVTDLINTPIGFADQLRLIFTDFTASGFSLDQVRAGVDGLTMATPLDTVKTDIAHGLTVTESMQKPLFNEWAGLGWVWVNLGFLVGGLYLLKAKIINWHIPVSFIASLAICSAIGYIASPGTEPGTLFHLLSGATMMGAFFIATDPVSAATTNKGRLIYGALIGLLIYLIRTFGGFPDAIAFSVLLINIAVPLIDYYTQPRTYGHGAVK
>NZ_CP040558.1|WP_138489359.1|2130143_2130785_+|electron-transport-complex-subunit-RsxG
MIISSMAKNGAILTAFALATTGLVASINALTADKIAEQEQLQLTAQLQEVLDPKSYDNQLSQDCVVITDEKLGPHANQVIYRARKNNKPVAVVIRHVTPNGYSGDINLLTAVLSDGTIAGVRTTKHEETPGLGDKVEVKKSLWITTFKSLTVEGEEDARWAVKKDGGQFDQFTGATITPRAVVGSVKNAVLFAQTNFDDIFAAPNAECMEVAK
>NZ_CP040558.1|WP_010553676.1|2130781_2131480_+|electron-transport-complex-subunit-E
MSELKTLYKEGVWVNNPALVQLLGLCPLLAVTSTVTNALGLGLATLLVLIGSNVTVSIVRNWVPKDIRIPVFVMIIAGFVTIVQLLMNAYTFGLYQSLGIFIPLIVTNCAIIGRAEAYASKNPVHLSAFDGLMMGLGFMAVLLVLGTMRELIGQGTLFDGADLLLGPWAQSLRIEVFNFDNQFLLAILPPGAFLGLGLLIAAKNVIDAQIKSKQIAPPEAEKGPRARVTSLT
>NZ_CP040558.1|WP_138489360.1|2131529_2132162_+|endonuclease-III
MNKEKRHQILSRLRDDNPHPVTELEYSSPFELLVAVTLSAQATDVGVNKATRKLFPVANTPQAILDIGHDTLRDYIKTIGLFNSKAANVYKMCQILVDEHNSIVPENREALEALPGVGRKTANVVLNTAFGWPVIAVDTHIFRVSNRTKLAMGKDVVAVEQKLEKVVPKEFKVDVHHWLILHGRYTCVARKPKCGSCIIEDLCEFKDKTE
>NZ_CP040558.1|WP_084298557.1|2132332_2132530_+|hypothetical-protein
MELPMNNETNNPRIKEDVEPKDLIKMQTEVGLIESMLQSKTLTAIVIIAIILLGGFFMFLSKVTG
>NZ_CP040558.1|WP_138489361.1|2132785_2133787_+|hypothetical-protein
MGFVIYLDQNTLSDLRQRKIDESPNDLFRLLKHALKSEQITVVYSHVTLDEILQIPKAEYRQEHIDILAELDAKYIEPLQHTLSNQEPDNIWYAHLENKKSNADLGITSLMEISQLSSRKISGLPIDESFSEINEKLKVNLGTLIFNCESQLDSIDLEKLNEPLRSYFVNMHSQLDELRTKLSSLQAPNIANEQQLGPQQFREMPSIKALEVKSIEIKDVVNAIEATFKLENNSFDFADYFEDTPQNAVARAYSLMNWAGYHADDFTRTKKGKDRFNASNNDMQHAVSALGVSFLISGDINFVKKAKACFAYVDCSTVVCNPQEFIEKHCNFI
>NZ_CP040558.1|WP_033021837.1|2134328_2136239_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MLPLLRILIIEQDPATLQGLSTNLSKTIPNFERDDIHIDIIECLELKHALECVEEDGDIQAVVLSWDMHNKVGERMYSRFIEDLKAIRLELPVYVIGDDTKGLEIVNESEEIESFFFKDEVISDPEAILGYMINDFDDRSETPFWTAYRRYVGEANDSWHTPGHSGGSSFRNSPYIKDFYQFYGRNVFVGDLSVSVDSLGSLSDSTNTIGRAQESAAATFEVKHTYFVTNGSSTSNKIILQTLLRKGDKVIVDRNCHKSVHYGILQSASYPIYLASILNPKYGIFAPPSLADIKLAIENNTDAKLLVLTGCTYDGLLSDLKQVVDYAHQYGIKVFIDEAWFAYSLFHPSFRHYSAIHAGADYITHSAHKVVSAFSQASYIHINDPDFDADFFREIYSIYASTSPKYQLIASLDVCQKQLEMEGYKLLNALLNHVEEFKQQMASLKQIKVLAKQDFMEIFPHFSGDNMGHDPLKILIDISELPYSLKDIHKYLLDEIGLEIEKYTHSTILVLLTLGGTRSKIIRLYNALKKLDSGKVKLSKSTRRARLPENLPAIDLACIPSDAFYGDRESVPISKSNNRICAGLVTPYPPGIPLLVPGQHITDDHVEYLQELASQGLTIQGSFDGEIYVLKGKVKK
>NZ_CP040558.1|WP_138489362.1|2140097_2143130_-|TonB-dependent-receptor
MSLKSRDNNNSTTGQFAMRPVAKWVRTAVIAGMASSCVFTASAQEDQGKATEVEEDVEIISVTGTRRTIQDQIAIKREATTVVDGLSSEDIGDLPALSIGEALESITGAASHRENGGATEITIRGLGPFLSATHINGREATNGSGDRSVNFSQFPSELVKKVAIYKTQDASMIEGGVAGVIALETITPLDFGKQRVSAEVKLNYNPDEGNVDNSLQSDAGYRGTFSYVDQFEFDNGQAVGVSFGVQRQEISQPEAEYRSSSPSGSSLWACLNDPTNTNEGFYRSSAGDCEDQVNGSSNQGYDTEIDPETGKAVSDGTPYAWTGSSRSFRQNETSDERDAVFFALQYQPSADWDVNFDAQISDRTQQEARHDLIFLQKRATPGVTGPTLVTNDVGGILHWEGEERIESAGEQFSREENYQGYGINIEHTVTDRLTVDLDLAYSKTEREELQISNRGRTSGRNFFSWDMGDEIPHFTLTDFDVTDISNFTDSLRTRLDRENVRENEVISARLDFDYALDGNVFTSIQGGIRTSEMTFLQYGGSQGNGSRNEFTLDSGTEALDVLQGCQIDFPESGFLSSVSDGDIVTNIDSDGNVVASGTGSSWATYDNVCFSQAVAGSNADGVFAYPEVEYENAGTIDVTEKTTSVYLMANYDTEMFGKFIRGNFGLRIVDTEVTSIGFRNSFDVVTSDTGILSLVESDNGSLDKIKSGGDYTKYLPSFNLVIDYSEDILFRAGIYRGMSRADPSDLGYSRTFQEDTEGTATSISDLLVGVNGSGNPDTQPLMSWNYDAAFEWYPNEDSILALSLYYKQFNGGFQQQTVIEEFTVGGETVSLPITNSVTSDEDSEILGLEASFSYRWDNGIGMKFGYNYADTDFEFQDSLYGDTFVTDVDGNTTQLTDGIVESASVPGFSKHVFSSQLYYQIGGFDTAVIYKYRSEYFQPYTTNGTRLRYVDGVGVWEMRASYKIDEHFRVKAEAINLFSAPKSQDFFVEGNLGEVNDYGPRLFLGLSYKL
>NZ_CP040558.1|WP_138489363.1|2143455_2146188_-|poly(beta-D-mannuronate)-lyase
MKFKHFALCAIAAAIVGCDTNSNNNDNNLGSIALSGTVTSGQTLTAEVSDPDGISGDVTYYWYADGEAIAGANSASFTLTDDQIGLPITVQGLYTDDGGINESHITDPTADVAAIAFPASLTITGDALVGSQLTANVADENGFDGDTVTYKWFADDIEIADEALSTLTLTDAQFGTVITVSASFEDSRGFNESVTSAGTEVVARTNSEGEVTISGTPTVGNILTAEVADTDGATGDITYQWLADAQEIDGAIESTFTVDASLLGQKISVQVAYTDDNGFIEDNTSEETIAVSAIAVDEAGSVAIMGVVPYLTTGELTAEITDNNGVEEANVTYTWSADGVEIAGSNSKTFTPSDYAGSIMSVKATYTDNDGFASEVTNSLDTLVYTQLVSNPEALLGAISGGLADGDVIGLNTGVYADMDAILLTSAVTLRAVEGQTPVLSGEVCVHVAAGVDGAGLTGLTFKNIDTKAGAFCETEEGAVIYSEGDNFTFSQNTMDGEEATLNNSEYHWLMIKGQSALVERNTFSNRNVAEKGSVIKISSSSSDHVIQYNLFSDSDNPNFDQSSLYLINAGSTTGSGAADNANFTIQYNRVENFVTGRRLMRVQTSGATIKGNTIVNPNGGISLEDGGFNSVTDNIIIRTTDIASSSDRPAGVLITPLGHTVSNNYIAGIRSGNKEAGGIVFTANPFSQADGGVPNSGNQAVLDSAGDFTLNVTNNTVLNSQQPIVFSTEIGSRAPVADCDELTAANAPVLYGLTKNAFVINFNGNLIANGLGDQTDADTISSSATTQGLFYPNTLDSDHAFEYDCDLINHDSSLLSNNFGYMDSRVSGDASGDWVEIRKLNGNGAFDTDGAIDQDPATNGKEVLEYVTAASTLLETDPAGLQAEAGAKGLHYIQSSEVGVGSTWKIQND
>NZ_CP040558.1|WP_138489364.1|2146639_2147602_-|class-1-fructose-bisphosphatase
MKRLNTVLKEDGIDTDLILLIRTILATSKEIAFRVSQGELAGVLGSTLNENVQGEVQKKLDVIANQLLKDILLDDSSVRSVASEEEDHAVGGHPEGKFIVAFDPLDGSSNIDVNGQIGTIFTIYLARDDVPFDSDEQFSQPGVNQVCAGYVLYGPSSLLVMSTGGPTRCYTLDSTHGGYLLTNKQLSVPEQSREFAVNMANYRYWDEPTQVYFDKLLYTCESFEKSSMRWNAAMVGDVHRILCRGGLFLYPQDKRSGNDNGKIRLLYEANPLALLVENAGGKATSRGTRILDIAPTSLHQRVPVALGSNEPVEFYNNAML

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Crispr_ID: NZ_CP040558_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040558_2

2793046-2793141

Orphan

Consensus_repeat	Method
CTACTGATTACAAGTCAGTTGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040558_2

>merge|NZ_CP040558|2|2793046-2793141|CRISPRCasFinder
CTACTGATTACAAGTCAGTTGCTTCAAGTTACCTAAAATAAATGGTGCCGACTAACCGAGTCGAACGGTTGACCTACTGATTACAAGTCAGTTGCT

>NZ_CP040558|2|2|2793046-2793141|CRISPRCasFinder
CTACTGATTACAAGTCAGTTGCT	TCAAGTTACCTAAAATAAATGGTGCCGACTAACCGAGTCGAACGGTTGAC
CTACTGATTACAAGTCAGTTGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040558.1\|WP_138490037.1\|2780478_2780664_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040558.1\|WP_007582957.1\|2798645_2799371_+\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
NZ_CP040558.1\|WP_024605357.1\|2799433_2800459_+\|16S-rRNA-(guanine(1207)-N(2))-methyltransferase-RsmC	unknown	unknown	gnl\|CDD\|181902
NZ_CP040558.1\|WP_138489610.1\|2783250_2784438_-\|2-octaprenyl-6-methoxyphenyl-hydroxylase	unknown	unknown	gnl\|CDD\|235584
NZ_CP040558.1\|WP_138489612.1\|2786882_2789966_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP040558.1\|WP_002962552.1\|2807033_2807630_+\|DUF2726-domain-containing-protein	unknown	unknown	gnl\|CDD\|371282
NZ_CP040558.1\|WP_039486381.1\|2803447_2805766_-\|aerobic-respiration-two-component-sensor-histidine-kinase-ArcB	unknown	unknown	gnl\|CDD\|236842
NZ_CP040558.1\|WP_138489614.1\|2791268_2792684_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP040558.1\|WP_138489611.1\|2784453_2785776_-\|Xaa-Pro-aminopeptidase	unknown	unknown	gnl\|CDD\|182804
NZ_CP040558.1\|WP_138489616.1\|2794287_2797065_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|236848
NZ_CP040558.1\|WP_002962551.1\|2805997_2806918_+\|GTP-cyclohydrolase-I-FolE2	unknown	unknown	gnl\|CDD\|237466
NZ_CP040558.1\|WP_002962543.1\|2797114_2797387_-\|oxidative-damage-protection-protein	unknown	unknown	gnl\|CDD\|180059
NZ_CP040558.1\|WP_138489618.1\|2800610_2802215_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP040558.1\|WP_138489615.1\|2792595_2792775_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040558.1\|WP_138489613.1\|2789962_2791279_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP040558.1\|WP_138489608.1\|2780623_2781823_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225375
NZ_CP040558.1\|WP_002962549.1\|2802714_2803431_+\|two-component-system-response-regulator-ArcA	unknown	unknown	gnl\|CDD\|183013
NZ_CP040558.1\|WP_138489617.1\|2797422_2798484_-\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|182805
NZ_CP040558.1\|WP_002962745.1\|2785804_2786368_-\|UPF0149-family-protein	unknown	unknown	gnl\|CDD\|234976
NZ_CP040558.1\|WP_138489609.1\|2782087_2783254_-\|monooxygenase	unknown	unknown	gnl\|CDD\|236139

Protein	Function_ID	Function_description	E-value
NZ_CP040558.1\|WP_002962552.1\|2807033_2807630_+\|DUF2726-domain-containing-protein	gnl\|CDD\|371282	pfam10881, DUF2726, Protein of unknown function (DUF2726). This bacterial family of proteins has no known function.	5.386e-42
NZ_CP040558.1\|WP_024605357.1\|2799433_2800459_+\|16S-rRNA-(guanine(1207)-N(2))-methyltransferase-RsmC	gnl\|CDD\|181902	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC.	1.24702e-97
NZ_CP040558.1\|WP_138489610.1\|2783250_2784438_-\|2-octaprenyl-6-methoxyphenyl-hydroxylase	gnl\|CDD\|235584	PRK05732, PRK05732, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated.	5.13066e-158
NZ_CP040558.1\|WP_138489612.1\|2786882_2789966_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP040558.1\|WP_039486381.1\|2803447_2805766_-\|aerobic-respiration-two-component-sensor-histidine-kinase-ArcB	gnl\|CDD\|236842	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional.	0
NZ_CP040558.1\|WP_138489614.1\|2791268_2792684_-\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.02298e-65
NZ_CP040558.1\|WP_138489611.1\|2784453_2785776_-\|Xaa-Pro-aminopeptidase	gnl\|CDD\|182804	PRK10879, PRK10879, proline aminopeptidase P II; Provisional.	0
NZ_CP040558.1\|WP_138489616.1\|2794287_2797065_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	1.54002e-89
NZ_CP040558.1\|WP_002962551.1\|2805997_2806918_+\|GTP-cyclohydrolase-I-FolE2	gnl\|CDD\|237466	PRK13674, PRK13674, GTP cyclohydrolase I FolE2.	8.76276e-117
NZ_CP040558.1\|WP_002962543.1\|2797114_2797387_-\|oxidative-damage-protection-protein	gnl\|CDD\|180059	PRK05408, PRK05408, oxidative damage protection protein; Provisional.	7.8027e-55
NZ_CP040558.1\|WP_138489618.1\|2800610_2802215_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.89765e-24
NZ_CP040558.1\|WP_138489617.1\|2797422_2798484_-\|A/G-specific-adenine-glycosylase	gnl\|CDD\|182805	PRK10880, PRK10880, adenine DNA glycosylase.	2.34847e-179
NZ_CP040558.1\|WP_138489613.1\|2789962_2791279_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	5.22808e-37
NZ_CP040558.1\|WP_138489608.1\|2780623_2781823_+\|alpha/beta-hydrolase	gnl\|CDD\|225375	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only].	2.80051e-26
NZ_CP040558.1\|WP_002962549.1\|2802714_2803431_+\|two-component-system-response-regulator-ArcA	gnl\|CDD\|183013	PRK11173, PRK11173, two-component response regulator; Provisional.	6.55857e-151
NZ_CP040558.1\|WP_007582957.1\|2798645_2799371_+\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	4.44488e-107
NZ_CP040558.1\|WP_002962745.1\|2785804_2786368_-\|UPF0149-family-protein	gnl\|CDD\|234976	PRK01736, PRK01736, hypothetical protein; Reviewed.	4.12748e-47
NZ_CP040558.1\|WP_138489609.1\|2782087_2783254_-\|monooxygenase	gnl\|CDD\|236139	PRK08013, PRK08013, oxidoreductase; Provisional.	1.71834e-154

>NZ_CP040558.1|WP_138489615.1|2792595_2792775_+|hypothetical-protein
MRCDEFKSLAQPLSSITLIASRVGLHCQIIIKPKLLLFMRLIQALWQILLNLLYITLHS
>NZ_CP040558.1|WP_138489614.1|2791268_2792684_-|TolC-family-protein
MIWQCKPTLLAISVMLLSGCASDLNSSQRMQVPNNMPQQWQQEASSSALKVQEQWLTQLQNPTLNKFVQQALKNNQQLLQTSYDVEIQKQQLIVSGAALWPSLDLSTRTSRSKDNRPVSYDNASSVSLNLTYEVDLWGKLSDAKREANLNYLAQQARFEQAKQQLVADVVTGWFDVVTAQQLLDLFKRREANSQQNLDIIEAGYRQGINEALDVYLARNELNNERSRIATQTASLSASARVLERLLGEYPKGAITASSDLPVINTDIPLGLPSELITRKPTLRASWYELLAADASLAYAHKQRFPSLDLTASLSDSTDRVSDLFSPSSLAWSLLGSISAPLFEGGRLKANEEIARLNTQKQEQLYLQTLYDAFGDVENAISQQQSLKAQYTSTLEAQENALAAEQLSFEQYQSGLVTYTTVLDAQDRSFDAQSSLIDIKNQLIANRINLHIALGGDFAKPSSELKSNNDEN
>NZ_CP040558.1|WP_138489613.1|2789962_2791279_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MKTKTAKIIIPAVVIVATILIVMFIKGNPPEAKRFGAPPKASISVAALELKPQNYQVMIDSYGTVKPRTQSLLVAQASGQIIEVSDDFREGGFFEKGDVLLKLDDRDHQAEVKSAQANLLTAEQGLLEEKARGQQAITDWKRLGGSNQASSLVLREPQLAAAEAEVLSAQAALEKAMLDLERTKVTAPYAGRILSRSVDLGQVVTNNTQLATIYAIDSVEIRLPIKNKDLPFVNLPEQYRDGAKNQAGSIVKFTSDLVGEQTWQGQLARTEGAIDEGAQQLYVVAKINDPYKATANNQYPIKIGQYIKAQITGRTVSNALIIPNSTIYQGTYVYIVEGGVLKRKDITLAWQNATQAMIKTGLNANDKLVITPLGQVSSGTQVSILGEQSADQPKSRGVNGQGKGKRPTPEQLEQKAKELGISVEELKKRRPAKQGDKP
>NZ_CP040558.1|WP_138489612.1|2786882_2789966_-|efflux-RND-transporter-permease-subunit
MIAWFAKNHVAANLLLVTLLLSGLFSLSTKIPLEVFPSFETDMISVNVSLRGSTPEDVEQGVTIRIEEAVQDLEGIKQIFSRSSEGSGSVTIEVETGYDPRELLADIKSRVDAINTFPADAEKPIVALAERIREVIAVTVSSDYGEKETREYAETVRDQILRLPNVTQVELSGVRDYEIAIEVSQDVLRQYDLSLAQISSAIANSSSDISAGNLKTEGGDVLISSKGQAYRKDEFANIVVKNQADGTIIRLGDIAIIKDDFEETPVRTRFNGKQAAFIDVYRIGPQSAITVADEVKNYIQEQQSSLPQGFELSYWDDDSELVKSRIATLTTNALQGGILVLALLTLFLRPAIAFWVFIGIPVSFMGAFIAMPIFGVTLNIMSLFGFILVLGIVVDDAIVTGENVYTHLKTAKSGEQAAILGTQEVATPVTFGVLTTVAAFLPLAFIEGARGALFAQIPVVVIPVLLFSLIESKFVLPAHLKYIKLRHEKGEPSKFDVIQQRFADGFENAILKYYQPTLNLALRHKLASVSLFVGVFIIILTMITSGWTKFVFFPRIPSETVRVNLTLPTGTPFEVTNKYVIDMSQKAQQLQEKYRDPDTGESVILNILATTGGRGGVSNSGSVRFEITPAEKRESDIGSRELASEWRDLIGVIPGAESLTFRAEIGRSSDPIDVQLSGTSLTILQDVADHIKTRLSTYPTVFDIADSMSDGKEELQIELTQQGLALGLNRVNVAGQVRNSFFGSQVQRIQRGRDDVRVMVRLPIDERRSVADLQNILINTPTGGSVPLSHVATLTAGQSPSTINRIDRYRTLNVTADIEKNNTNMTILQADLTEYLDELMQQYPGVDYKLEGEAKEQRESFGSLAWALVFVFFIIYALLAIPLKSYLQPIIVMSVIPFGMIGAVVGHWIMGMDLTIMSLLGMLALTGVVVNDSLVLVDFINKKRSEGGKLLDAVKLAGASRFRPVMLTSLTTFIGLMPLLFEKATQAQFLIPMAVSLGFGIIFATFITLLLVPINYMMMERFQGWFK
>NZ_CP040558.1|WP_002962745.1|2785804_2786368_-|UPF0149-family-protein
MNDLPDYEKAQLLLEKNEIFVSPAEAHGVISGLLACGLTIDDKEYLGLLSDVFNDGESFSNDLKQFFGTIYKQVVASFNDDEFQFDLFLPNDDETLIDQANGLVSWVAGFMLGFGLKQKDYGKLSSDVKEVITDFSEITRLDTTFEETEEDSQALHEVIEYVRVSALLCFAELGKEQNTQSTKKTLH
>NZ_CP040558.1|WP_138489611.1|2784453_2785776_-|Xaa-Pro-aminopeptidase
MVEVQKSEFKARRERLLAQMDKNSVAIIPAASEVTRSRDTEYAFRQDSDFFYLTGFNEPDAVLVLCNNSDAPSTLFCLDKDKLAEIWHGRRVGFDKAKSDYLFDEAYPLSELNDKLLDILNEKDAIYFAQGAYLSFDTKVFTLLGTLRSGARKGLKAPSTLKEIRGLIHEMRLFKSPSEVNVMREGCEISARGHMRAMRFSHPGATEFQLEAELHHHYAMNGAPHPAYGTIVGSGDNANILHYTQNSDVLKNGDLVLIDSGCELQGYAADITRTFPVNGQFSEEQAALYNIVLKAQEVAFDEVKPGGYMSHANKLAMEVMTQGLLDLGILTGDFDELMAKGACKEYYMHGLGHWLGLDVHDVGDYKVNNVERAFEPDMVLTIEPGLYISEDSSAPQKYKGIGIRIEDNLLVTETGHENLTLSVPKKISDIEALMQSAKNV
>NZ_CP040558.1|WP_138489610.1|2783250_2784438_-|2-octaprenyl-6-methoxyphenyl-hydroxylase
MAKQFDVVIIGGGLAGASCALSVAKTNPALNIAVVEANQVTGDYHPSFDDRSIALAQQSVEYLQSLNLFEQNAPYTAAIKKVSVSDRGHFGKAHINCDEFSKPSLGYVVEVNPFGRALHLRLTQSNITLLCPDSVTAIEQTLHSNTLTLQSGEQLSAALLVIADGAQSPTRNLLGLGFNTQPYEQGAIIANVEVAGGHNNHAFERFTQSGPMALLPMSNNRYSLVWCMSQDQVEQHMALNEQDFISALQSAFGYRGGQFTKVGMRTSYPLVYGQVESLTAHRTVVIGNAAHAIHPIAGQGFNLGLRDVQVLSNLIANSQHGLGSYAFTREYSKKRSDDIKTVMSLTDALVRLFSNSSRVLALGRSIGLFSMDLFPALKAPLAKQLMGQVKQGRRL
>NZ_CP040558.1|WP_138489609.1|2782087_2783254_-|monooxygenase
MKQAQVCIVGGGCVGLTLALGLAKADISVVVLDGAPTQVLPTDEYGLRVSALSIASQTLLEQLNVWPEIIAQRACAYTHMDVRDADSFGKITFNNEQLELEHLGHIVENDIIRYALIKELEQQPSATLMFDTQYQQIHQSESDVFITLKSGEPIIAKLLVAADGANSAIRKQFNMALSFKDYDHHALVATVKTKEPHENTARQVFLPTGPLAFLPLSDANTHSIVWSTSPNHCDELLAMNDSAFNKAVMAAIDGQCGLCEVQSARAAFPLKMRYAQQWVSGKVVLIGDAAHTIHPLAGLGMNLGLKDAAYLIELLTSDSKEFASTRTLRDYERTRKLDAQKHIAMMQGLKELFAGANPVKKLIRGVGLSLVDNLGPIKHLFAKEAIGK
>NZ_CP040558.1|WP_138489608.1|2780623_2781823_+|alpha/beta-hydrolase
MKLLLSLVLILTFSTPFLSHAKTNTTDITVGKKVILQSKILNEDRPIKIFIPDTVKDDQPLYVIYLLDGVEHFHTASGVIKSLVDYEQIPNAMLVGIDTTNRVRDYLPKVDGEPKTEFQTFVKNKWPDAGQTDKFLKFVSDELMPYINSNYSTNGYNTLIGHSNAGTLALYTLVNQPELFNNYIAISPNSWWSDEELKNNIIKYTKNPKGGQSLFISVASEGSRFYTGVLNTLVNLEQQMPTQLKWEYKHYPTFSHMGTILPALSDSLIHLFGDLIFNVTDEHGRFADVSLITGYYQALSDKYGFELKIPQDVYVEFAHSQQKFGNTAKAVTTLKHFTTHYPNAAYSHMRLSQGYTANKQFKEAVTSMKHALELAKQNSRDPMLVDALQDMVNEAQENL
>NZ_CP040558.1|WP_138490037.1|2780478_2780664_+|hypothetical-protein
MFIIYAKLARVKSAALNYLSLTPASKYKYLLKLKAVQLLSNTLLNKDIYEALTIACINTYF
>NZ_CP040558.1|WP_138489616.1|2794287_2797065_+|hybrid-sensor-histidine-kinase/response-regulator
MQSKFSSPVKGLLPLFLIINIAVTALAIIAHSFYTQIEVKTAQPASSINIVTLADRLDLPMVDALTMYGQGKVRQLLDLTSLLDDDFEYTLYRFNATSDTQLVYSSSKPAIASIKTEKHLVEEGILHHLLLLNDQPIGELIIKQNLPTAPLSAQNSQVIAYIIAIASVAALFIFTLMFNMYINSRLRKSTDSLTQELQAITENANYNSSVDEQLDIGLGVVAKNINLLLQKVQTAMSENDTAQKELYKLQNGLEAEVQNRTIALEQATLKAERASDTKTTFLATMSHEIRTPMNGVIGTIDLLRQTELDGAQHRLSTIIRESAFSLLSILDDILDFSKIEAGKLNIDPIPFSVTDTIEEVARVLSSVAKKRELDLELAIAPDIPVNLTGDSVRVRQVLYNLCSNAIKFTSTDEKTQGHVKISAEVVHNTTDHFTLRFCVTDNGKGMSQAQLREIFNPFIQAENSITREYGGTGLGLSICKSLTELMLGTIHVTSHTGIGSEFTVELPFSTSGKIKYAHKGALNGKKIVVVSNHLEREKTMYRYLSFMGAKIIYAHTEEEIEEHQHSQDIIWVADGIDNMDKTNALLRRLFYSLEDYNQQVVVLSKLDEAAINHKNIFYINASPLCKSNFMLSILVAAGLHTPKQIKKTKTLNNYLNVEQARDSNKLVLLVEDNLLNQQVLTDQLHILGFGVEIANNGEEGLDMWRKGDYSLILTDLHMPKMSGYDMVEKIRNEAELLESIDAQPYIIAVTANALKGEKERCLAVGINDFITKPIELNALEETLKRWSDKQSQNPNVVIHQTMALPIDMEAVAKYVNGDNAKQIRFFKMYLEQSQGLIKSINSGVMVNDLNEIIEGCHQLKSISKTIGAQTVAELSSAFEDKCKEGELTTDELIELRDKLEIEYSKAAQFLKEQIKISEQEDELNE
>NZ_CP040558.1|WP_002962543.1|2797114_2797387_-|oxidative-damage-protection-protein
MARTVFCQKLQKEAEGLGFQLYPGEIGEKIFNNISKEAWAQWQHKQTMLINEKHLNMMDPEHRTFLEEQMVGFLFENKDVEIEGYRPPEK
>NZ_CP040558.1|WP_138489617.1|2797422_2798484_-|A/G-specific-adenine-glycosylase
MLDLNKEQSHWFSNQVVDWYHLHGRKTLPWQLGKTPYKVWVSEVMLQQTQVITVIPYFEKFMQSFPDIIALADADEDLVLHHWTGLGYYARARNLHKTAKIVRDKYQGEFPKTLDEVMGLPGIGRSTAGAVLSLSLGQHHPILDGNVKRVLARYFMIEGWYGVKKVENQLWHLSEQLTPKDNVTEFNQAMMDLGSSVCSRSRFDCEACPLNSGCGAFNAGKVKEFPHSKPKKAVPKKSCHQLIIQCGDKVLMEKRPNSGIWGGLFGFFEFNEYEELQMFLAQQGLKADLVELEAFIHVFSHFELRINPHVLNVKKTLDVVNDKQLIWYPLDQSIEVGLAAPTKKLVKQITAIV
>NZ_CP040558.1|WP_007582957.1|2798645_2799371_+|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MSESSNTNLEQAKQEGKYIRTIRSFVKREGRLTKGQAAAIEKCWPTMGLEHKNGMLDLSEVFGNNNDVVVEIGFGMGKSLVEMATNAPHLNFIGIEVHRPGVGACLMDADEAGITNLRIFEHDAVEVLADCIPNESLTTLQLFFPDPWHKKRHHKRRIVQTEFVEKLRAQLKMGGVFHMATDWENYAEHMLEVMNVAPGFKNQSETNDYVPRPDLRPLTKFEQRGHRLGHGVWDLMFERTE
>NZ_CP040558.1|WP_024605357.1|2799433_2800459_+|16S-rRNA-(guanine(1207)-N(2))-methyltransferase-RsmC
MSVLTNPSLLLLRNSEALTGKSILVVNFVQDGFLTELKRLNPQSKVTAFSYNHANGEFAKNTKDVDVHVSHTIPGNDYDLVILYYPKSKPELLMALDNIRSAITDDAELLVVGENKSGVKSIEKQLAGKAEFSNKIDSAKHCVLYSFAEISKHPHFDITTYHKKFVVNVADTEFTAISVPGVFNHGSLDIGTKVLLENAPTIKQGKVLDFGCGAGLIATFLGLHNPALEFVCSDVSALATYATQQTLKLNNINGEAILSDGLKSINGKFDLIISNPPFHTGIATDYTVAETFLANAKQHLTKLGKLNIVANSFLKYPPILETQFESYQTVFKNNKFAVYSS
>NZ_CP040558.1|WP_138489618.1|2800610_2802215_+|HAMP-domain-containing-histidine-kinase
MPKKVHQSSIRKALINLIMLITAICLSLSISISTYLSVKEQKQLIVNKLVILSEIVAFDAGQSVIEDDRKTEEKRLKSFEKIPLVKNIHIYSIEKASQKPVFFISFNAKKTPPVPLRIDSVEELKTPRITNDHIELTRPIYDNEQVVGYVYMRGSLESLEVYIERKILIDVLLTLLILVVVYFIAIKVQRRIAKPIEQLSMLLQDVSKNHNYDARAPVTDVKEISALSNSLNIMLTRTKKQLERHEKDKQEIKQLNLSLEEKVNQRTIALREANQELLSTLERMHQYQTQIVENEKMASLGQMVAGVAHEVNTPIGLGITGSTLLRDKLADIQQSFDDKKLTSSHLKRFIDEGIENLDLIYRNLNRAADLISNFKKVAVIQDDGVNTYINVHKLISDVLTSIQSELLPKKPVVTINCPTDLAIHSKSEPLQQVFQQLLMNSVIHGFIGKENNEIRFDVELVGKKLTIVYSDNGQGVDKNIKNRIFDPFVTSKRGQGASGLGMHLVYNLVTQALGGRVMFDLEEKRGARFIITIP
>NZ_CP040558.1|WP_002962549.1|2802714_2803431_+|two-component-system-response-regulator-ArcA
MQTPVILIVEDEDVTRLNLVSLFEAEGYKVIEAIDGDDMHDKLTNNDDVNLVVMDINLPGKNGLILARELRQKRKVGLIFLTGRDNDVDRILGLEIGADDYVTKPFNPRELTIRARNLITRTALGGEESALETNGVITFNGWELDENSRCLTSPNGDAKRLPKGEYRALRLMLDSPGRIFSREQLIKHMTGRELRANDRTVDVTIRRIRKHFESDNSTSELISTIHGEGYRFIGKIDA
>NZ_CP040558.1|WP_039486381.1|2803447_2805766_-|aerobic-respiration-two-component-sensor-histidine-kinase-ArcB
MTDYSLSPWARVLSSSITRFGEFKTAAICYTLFLTVSLILSSMFYYVAIGELHLVDILAVVFFTAVVSPLIISVLLNSIRQLDASYAYLDSATKQEKLLNQTLKDNINRLNIEIDERKMAFHAKHRAIEELRREIAERKKTQQELAQQSMLQRSIVDSSPDLFYYRDNNGVFAGCNKMFEEVMGKSSSELIGKTVEQIFPSHFLSEVLKTDKEVEQSHKALTIDVGYEVNGETRWFELRKLPFINDEGDYIGLLGFGRDITSRKEAAQALETAYKDKGKFIATLSHELRTPLNGIVGLTRMLLDTDLNKQQRSWGNTIFSSAETLGNIFNDIIDLDKIDRDQLDIVTNSINVSDFINDVVNFAGLIAEQKELEFDIKRNGVLDIYAQLDPTRLRQVVWNLINNAVKFTQQGKVTLECSRENRVEGPWLVMKVSDTGQGIPPEQLAHIFDMYYKAPDLKGTNAIGSGIGLAVTKALVSAMKGIITVNSTEGEGSCFTVQIPLSLCVAPTEQSYVGRGLYILLVEDVPLNAEIATNLLEQRGHEVLWAETGEDALSFVETEDDLDLVLLDMQLPDINGDVVAKQIRSDSHFDKLPIVALTANVRSAEEELEGISIQGALAKPINTVKLDKMLADLFGIKQSECTEPLLKVSEEALKGIDAHLLDIETIEDFVNSMGLVVFRRSSQLFEKLSPQYQQELLTSLNTGDREEYESVAHKLKGAAGSVGLNDVQLHAKIMEHGAIDESDEVLKQWLDILADKINEGQKALHLFLQQLE
>NZ_CP040558.1|WP_002962551.1|2805997_2806918_+|GTP-cyclohydrolase-I-FolE2
MQTNMPDIADTAPALQTGKLDWVGMGEIELPFIFESRDLSPVTVNAKARAFVNLHKEDAKGIHMSRLFLALDLLSTEQQVNPQTIAQALDTFITSHEGLSDKAQIEFKFELPLRRKSLLSGKAGWKSYPVVLTSTIENNVISYELTVDVTYSSTCPCSAALARQLIQNAFNEKFNQETLSQKDVHEWLGTTQGIVATPHSQRSIANVKVKLDSNIQEFDVVTLINTLEAELKTPVQAAVKREDEQEFARLNGQNLMFCEDAARKIKALLEANNYSDYWLQINHYESLHAHDAVAIAVKGIKGGYKA
>NZ_CP040558.1|WP_002962552.1|2807033_2807630_+|DUF2726-domain-containing-protein
MEFALLLILVLVVGASVVASKFNDDGGNPYPFTRKQTVFTQVEGAFLNLLERAVGDQYKIVSRVKLIDVIDCKQGLSVKSKRAALAKAKNKQLDFVLIDKEKLTIIAAVDLVNNANKDGHKAQRDWFVNGALESAGIPHIRMKVKSGYRPSEVRDAIMFKLGKPAATQTQRPVRNRSHKPAVLSPSQAKAQTTALAEI

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1670254 : 1724332

Bacillus_phage(15.38%)

protease,tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138489136.1\|1670254_1671067_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_138490013.1\|1671185_1672031_-	DNA-binding protein	NA	NA	NA	NA
WP_008133668.1\|1672977_1673643_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.0e-38	46.9
WP_024607063.1\|1673698_1674052_+	sulfurtransferase complex subunit TusD	NA	NA	NA	NA
WP_002962696.1\|1674048_1674405_+	sulfurtransferase complex subunit TusC	NA	NA	NA	NA
WP_138489137.1\|1674401_1674668_+\|tRNA	tRNA 2-thiouridine-synthesizing protein	NA	NA	NA	NA
WP_138489138.1\|1674671_1675001_+	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA
WP_138489139.1\|1675000_1675687_+	pseudouridine synthase	NA	NA	NA	NA
WP_138489140.1\|1675679_1676120_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_002962705.1\|1676366_1677467_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_033028400.1\|1677466_1678069_+	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_002962710.1\|1678100_1679471_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.1e-111	46.2
WP_138489141.1\|1679559_1680717_+	cupin domain-containing protein	NA	NA	NA	NA
WP_024606109.1\|1680871_1681330_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_138488686.1\|1681489_1682530_+\|transposase	IS481 family transposase	A0A077SLK2	Escherichia_phage	4.2e-177	83.5
WP_024594685.1\|1682605_1683052_-	DUF4826 family protein	NA	NA	NA	NA
WP_138489142.1\|1683169_1684573_-	M28 family peptidase	NA	NA	NA	NA
WP_002962719.1\|1684747_1685161_-	hypothetical protein	NA	NA	NA	NA
WP_138489143.1\|1685310_1686108_+	hypothetical protein	NA	NA	NA	NA
WP_138489144.1\|1686114_1686519_-	GFA family protein	NA	NA	NA	NA
WP_138489145.1\|1686743_1687580_+	hypothetical protein	NA	NA	NA	NA
WP_138489146.1\|1687677_1689525_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.6e-31	27.9
WP_002963227.1\|1689652_1690072_-	MAPEG family protein	NA	NA	NA	NA
WP_138489147.1\|1690260_1692648_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.0e-24	40.8
WP_138489148.1\|1692825_1693929_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_138489149.1\|1694435_1696727_+	U32 family peptidase	Q6DW11	Phage_TP	9.4e-20	32.9
WP_002962992.1\|1696737_1697397_+	glutathione S-transferase	NA	NA	NA	NA
WP_138489150.1\|1697533_1698796_+	valine--pyruvate transaminase	NA	NA	NA	NA
WP_002962995.1\|1699089_1700289_+	divalent metal cation transporter	NA	NA	NA	NA
WP_138489151.1\|1700392_1700845_-	hypothetical protein	NA	NA	NA	NA
WP_138489152.1\|1700829_1702020_+	PQQ-dependent sugar dehydrogenase	NA	NA	NA	NA
WP_039489617.1\|1703282_1703501_-	hypothetical protein	NA	NA	NA	NA
WP_138489153.1\|1703635_1704271_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_138489154.1\|1704912_1705887_-\|transposase	transposase	NA	NA	NA	NA
WP_138489155.1\|1705969_1706944_-\|transposase	transposase	NA	NA	NA	NA
WP_138489156.1\|1707237_1708239_-	DUF4062 domain-containing protein	NA	NA	NA	NA
WP_008133608.1\|1708901_1710206_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-93	51.3
WP_021032117.1\|1710215_1710596_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	2.1e-09	38.5
WP_138489157.1\|1710588_1711932_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	5.4e-76	37.7
WP_138489158.1\|1711924_1712551_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_024595504.1\|1712547_1715046_-	DUF87 domain-containing protein	A0A218M9A2	Mycobacterium_phage	1.4e-88	49.1
WP_007582985.1\|1715219_1715699_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_002962982.1\|1715841_1716963_+	alanine dehydrogenase	NA	NA	NA	NA
WP_002962483.1\|1717071_1718397_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_002962484.1\|1718684_1719635_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.0e-60	41.7
WP_024595507.1\|1719732_1720449_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_024606094.1\|1720441_1721146_+	arginyltransferase	NA	NA	NA	NA
WP_002962494.1\|1721236_1721455_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_138489159.1\|1721668_1723930_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.1e-165	41.1
WP_021032429.1\|1724023_1724332_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.3e-12	36.4

DBSCAN-SWA_2

3392851 : 3400731

Lactococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138489841.1\|3392851_3393814_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.9e-47	37.0
WP_138489842.1\|3393823_3394819_+	SyrP protein	NA	NA	NA	NA
WP_002960225.1\|3394818_3395823_+	YeiH family putative sulfate export transporter	NA	NA	NA	NA
WP_024595869.1\|3396249_3396459_+	cold-shock protein	Q9AZD3	Lactococcus_phage	2.4e-15	66.7
WP_007580429.1\|3396644_3396854_+	cold-shock protein	Q9AZD3	Lactococcus_phage	8.3e-16	66.7
WP_007580429.1\|3397041_3397251_+	cold-shock protein	Q9AZD3	Lactococcus_phage	8.3e-16	66.7
WP_007580429.1\|3397439_3397649_+	cold-shock protein	Q9AZD3	Lactococcus_phage	8.3e-16	66.7
WP_002963088.1\|3397880_3398129_+	DUF3297 family protein	NA	NA	NA	NA
WP_138489843.1\|3398297_3399203_+	homocysteine S-methyltransferase family protein	NA	NA	NA	NA
WP_138489844.1\|3399189_3400731_+	BCCT transporter	A0A2I7QNT1	Vibrio_phage	1.9e-08	23.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP040559

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP040559_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040559_1

238651-238801

Orphan

Consensus_repeat	Method
AAAGCGAGGTATAAAACCTCACCTACATCGTGCAAATACCAAACCCGTAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040559_1

>merge|NZ_CP040559|1|238651-238801|CRISPRCasFinder
AAAGCGAGGTATAAAACCTCACCTACATCGTGCAAATACCAAACCCGTAGGGGCGAATTTATTTCGCGCTCATGTAACGGGGCTTGTATGCTTTAAAGTAAAAGCGAGGTATAAAACCTCACCTACATCGTGCAAACACCAAACCCGTAGG

>NZ_CP040559|1|1|238651-238801|CRISPRCasFinder
AAAGCGAGGTATAAAACCTCACCTACATCGTGCAAATACCAAACCCGTAGG	GGCGAATTTATTTCGCGCTCATGTAACGGGGCTTGTATGCTTTAAAGTA
AAAGCGAGGTATAAAACCTCACCTACATCGTGCAAACACCAAACCCGTAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040559.1\|WP_138490159.1\|224871_226104_+\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP040559.1\|WP_138490160.1\|229270_231451_+\|catalase/peroxidase-HPI	unknown	unknown	gnl\|CDD\|237891
NZ_CP040559.1\|WP_138490170.1\|247512_248256_-\|ferredoxin--NADP-reductase	unknown	unknown	gnl\|CDD\|99792
NZ_CP040559.1\|WP_138490167.1\|243296_244625_+\|response-regulator	unknown	unknown	gnl\|CDD\|225971
NZ_CP040559.1\|WP_138490171.1\|250658_251399_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366132
NZ_CP040559.1\|WP_002959108.1\|227474_228365_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP040559.1\|WP_002959105.1\|232317_232731_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|181730
NZ_CP040559.1\|WP_002959106.1\|231553_232126_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040559.1\|WP_002959099.1\|235203_236610_-\|ethanolamine-ammonia-lyase-subunit-EutB	unknown	unknown	gnl\|CDD\|237897
NZ_CP040559.1\|WP_138490168.1\|244699_245719_+\|ferrochelatase	unknown	unknown	gnl\|CDD\|366291
NZ_CP040559.1\|WP_138490165.1\|239313_241854_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP040559.1\|WP_138490166.1\|242109_243063_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|226654
NZ_CP040559.1\|WP_076914907.1\|248768_250367_-\|ABC-F-family-ATPase	unknown	unknown	gnl\|CDD\|237894
NZ_CP040559.1\|WP_024596283.1\|226103_226808_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP040559.1\|WP_138490161.1\|232856_234260_-\|ethanolamine-permease	unknown	unknown	gnl\|CDD\|129986
NZ_CP040559.1\|WP_002962108.1\|246188_246509_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040559.1\|WP_138490163.1\|236830_237787_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|182258
NZ_CP040559.1\|WP_138490169.1\|246518_247262_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378915
NZ_CP040559.1\|WP_138490162.1\|234319_235207_-\|ethanolamine-ammonia-lyase-subunit-EutC	unknown	unknown	gnl\|CDD\|235482
NZ_CP040559.1\|WP_138490164.1\|238908_239109_-\|alternative-ribosome-rescue-factor-A	unknown	unknown	gnl\|CDD\|367714

Protein	Function_ID	Function_description	E-value
NZ_CP040559.1\|WP_138490159.1\|224871_226104_+\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP040559.1\|WP_138490160.1\|229270_231451_+\|catalase/peroxidase-HPI	gnl\|CDD\|237891	PRK15061, PRK15061, catalase/peroxidase.	0
NZ_CP040559.1\|WP_138490170.1\|247512_248256_-\|ferredoxin--NADP-reductase	gnl\|CDD\|99792	cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	3.09205e-121
NZ_CP040559.1\|WP_138490167.1\|243296_244625_+\|response-regulator	gnl\|CDD\|225971	COG3437, COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms].	1.80804e-52
NZ_CP040559.1\|WP_138490171.1\|250658_251399_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|366132	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3.	1.99973e-24
NZ_CP040559.1\|WP_002959108.1\|227474_228365_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.76068e-10
NZ_CP040559.1\|WP_002959105.1\|232317_232731_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|181730	PRK09256, PRK09256, aminoacyl-tRNA hydrolase.	2.35929e-74
NZ_CP040559.1\|WP_138490162.1\|234319_235207_-\|ethanolamine-ammonia-lyase-subunit-EutC	gnl\|CDD\|235482	PRK05465, PRK05465, ethanolamine ammonia-lyase subunit EutC.	1.06055e-128
NZ_CP040559.1\|WP_002959099.1\|235203_236610_-\|ethanolamine-ammonia-lyase-subunit-EutB	gnl\|CDD\|237897	PRK15067, PRK15067, ethanolamine ammonia-lyase subunit EutB.	0
NZ_CP040559.1\|WP_138490168.1\|244699_245719_+\|ferrochelatase	gnl\|CDD\|366291	pfam00762, Ferrochelatase, Ferrochelatase.	5.5194e-149
NZ_CP040559.1\|WP_076914907.1\|248768_250367_-\|ABC-F-family-ATPase	gnl\|CDD\|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
NZ_CP040559.1\|WP_138490166.1\|242109_243063_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	6.42365e-38
NZ_CP040559.1\|WP_024596283.1\|226103_226808_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	3.44112e-147
NZ_CP040559.1\|WP_138490161.1\|232856_234260_-\|ethanolamine-permease	gnl\|CDD\|129986	TIGR00908, putative_ethanolamine_permease, ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily. [Transport and binding proteins, Amino acids, peptides and amines].	2.55152e-135
NZ_CP040559.1\|WP_138490163.1\|236830_237787_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|182258	PRK10130, PRK10130, HTH-type transcriptional regulator EutR.	1.56823e-55
NZ_CP040559.1\|WP_138490169.1\|246518_247262_-\|hypothetical-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	4.31674e-10
NZ_CP040559.1\|WP_138490165.1\|239313_241854_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.86932e-47
NZ_CP040559.1\|WP_138490164.1\|238908_239109_-\|alternative-ribosome-rescue-factor-A	gnl\|CDD\|367714	pfam03889, DUF331, Domain of unknown function. Members of this family are uncharacterized proteins from a number of bacterial species. The proteins range in size from 50-70 residues.	5.80801e-16

>NZ_CP040559.1|WP_138490163.1|236830_237787_+|helix-turn-helix-domain-containing-protein
MAQQSSFSAPLKSKVQTHDIDEQAHSLTQWQQKYDQMSDGSFYGCIEETDYANIHVFKEYTERALRQQCNIAPNSVWLGIPCQSQQSKINGLSVASNQFMCRTSDNDFELITPEQFNIYGLVIDWNSIEYMAQLQGVTLKNLASAQSARLSVSNSSLQTARQIINSMVVGKGFGLKTESQQDMLNMLALHLLQADNPQQNIAPSYKHRKAVVDKVKDYVATNPQNPITITELCELSFVSRRTLQYSFESILGINPLRFLRLTRLNNVRRELKKPNQDKPISVIAANWGFWHAGQFAKDYTQLFGENPSQTVKNNSFKG
>NZ_CP040559.1|WP_002959099.1|235203_236610_-|ethanolamine-ammonia-lyase-subunit-EutB
MGQAYSYTLGTHTYKFKNLAQLMAKATPQRSGDRLAGVIAQSAQERAVAQMTLADIPLKTFLNEVLIPYEDDEITRLIIDEHDANAFMAIAHLTVGDFRNWLLSDFATPAVLASIRQGITPEMAAAVSKIMRNQDLILIAKKCHVTSAFRNTIGLPGHLSTRLQPNHPTDDINGIAACMLDGLLYGNGDAVIGINPATDNVAQAIKLMTLMDDVIQKYAIPTQSCVLTHVTNTIECIEAGAPVDLVFQSIGGTEATNSSFGFNLNTLAEAQDAALSLKRGTVGNNVMYFETGQGSSLSANAHHELDQQTCEARAYAVARKFNPLLVNTVVGFIGPEYLFDGKEITRAGLEDHFCAKLLGIPMGCDVCYTNHAEADQNDMDNLLTLLGVAGCSFVMGIPGSDDIMLNYQTTSFHDALYVRRVLGSRPAPEFEAWLSKMKIMQSTTDITLSDTLPPAFAKPLGAITGGGS
>NZ_CP040559.1|WP_138490162.1|234319_235207_-|ethanolamine-ammonia-lyase-subunit-EutC
MKSRSKQNTPLDDSVNEHKNNGNVVHNPWSDLRRFTDARIGLGRAGISLPTSEMLAFQLSHAQARDAVSFPLDINEMTEQLGSISVLKEVAPPLHLHSQAVDRVTYLQRPDLGRKLDENGRQILLSYMNKQKHTTQAKYDLAIVVVDGLSSLAVQKNACPFITELLAHLTTDKQFKIAPITLVEQGRVAIGDDIGELLNAQVVMVLIGERPGLSSPDSLGLYLTWEPKTGLNDACRNCISNIRPAGLPYTEAARRALYLLREAKKLKLTGVNLKDRTQDDVIEHQVSTTNFLIAE
>NZ_CP040559.1|WP_138490161.1|232856_234260_-|ethanolamine-permease
MSTNNTEYLAKRQLKRGTAGWLLLAGLGVSYVISGDFAGWNFGIAEAGWGGFAIAAVLMAVMYLALVLSLAEMSAAIPAAGGGYSFARQAMGPAGGYLTGLAVLIEYALAPAAIVIFIGSAVEALTGFNGPWVYALFYLLFVGIHLAGVGEALKVMMVISGLAVLAIIATAFVLITNFDASRLFDVPVTDAVGASEFLPLGWYGVWAALPFAMWLFLAVEGVPLAAEEAKDPAKDVPKGIIGAMIFLLFTAFLVVVLVPGAGGAAAMGASAVPLVDALNASGSEGLATVVNILGLAGLVASFFSIIYGYSRLVFALSRAGYLSRSLSITTNRKVPARALIVPAVFGFLVSLSGEGDLILAMAVVGATVSYALMALSHILLRVKQPDLPRPYKTPGGVVTSSIALVLSLIALTGVYAFDPRAFLYTIMLFIVGAVYYFGYSSKHLVAKSADEEFAMLADAESDLEMAK
>NZ_CP040559.1|WP_002959105.1|232317_232731_+|aminoacyl-tRNA-hydrolase
MLTISNTVTIDEWELELTAIRSQGAGGQNVNKVASAIHLRFDINRSKLPDFYKERLLALNDTRITKDGVLIIKAQSHRTQELNREDALKRLKDLILSATVVNKARRATKPSRNSQRKRMDKKTKHGQNKALRGSIKF
>NZ_CP040559.1|WP_002959106.1|231553_232126_-|hypothetical-protein
MKKILVSLSLLAMSFSSLAEDINEGQLQSYMKALPAVTSWASSQESLKDLDLASMLGGSADQSVGEQSSLANSALSMIKEQDLYKSFASVTNRYGFTPEQLVTVGSEVSMAYIENLKSGLSADNQETANKVMGGFQSMKSAKDKGASSLMGSFGKSSSAAEESTESLVSENNLELVSEYMPQLQKLFALL
>NZ_CP040559.1|WP_138490160.1|229270_231451_+|catalase/peroxidase-HPI
MSKPTAGKCPVMHGSNSVVSKVNTDWWPNTLNLDILHQHDTKSNPYGTNFNYAEEFKSLDLDEVKADLKTFMTDSQDWWPADWGHYGGLMIRMAWHSAGTYRLSDGRGGASTGNQRFSPLNSWPDNASLDKARRLLWPLKKKYGNKLSWADLFILAGNMAYESMGLKIYGFAGGREDIWHPEKDIYWGAEKEWLAPSDERYDNVEKPDTMENPLAAVQMGLIYVNPEGVNGIPDPLKTAAHVRETFARMAMDDEETAALTVGGHTVGKTHGNGKAEHLGPEPEAADVHEQGLGWNSTKEGGFGRHTVTSGLEGAWTTHPTTWDNGYCHLLLNYEWELTKSPAGAHQWEPVNIKEEDKPVDVEDPSIRLNPMMTDADMAMKVDPAYRKIIERFYNDFEYFSDVFARAWFKLTHRDLGPKACYLGKDVPSEDLIWQDPIPAVDYTLSDDEIISLKAQLLDCGVSASDLINTAWDSARTYRGSDKRGGANGARIRLAPQKDWQGNEPARLASVLSALEKVQAGLSKPVSMADLIVLGGTAAVEQAAKQAGVNVTVPFASGRGDATDEMTDAESFDVLEPIHDGFRNWLKKDYAVSAEELLLERSQLMGLTAPEMTALMGGMRVLGTNYAGTKHGVFTDNVGTLSTDFFVNLTDMANNWKPLEPGLYNIVERKTGTIKWTATRVDLVFGSNSILRALSEFYAQDDNKERFVHDFVNAWVKVMNADRFDLK
>NZ_CP040559.1|WP_002959108.1|227474_228365_-|tetratricopeptide-repeat-protein
MRYYLSVLFVCLTLFSGIVNSAEKQPASPTAQQEQQALQQLKEPMYKPLMERYILDELKAVRQDQQKLREDVTKQVTHAQLDTADRALTYTTDTINNVFFIITATASILVLVGWNSLRDVKNKVEDIVNTRVSVITDEYEDRLKILEEKLRVRSEEILSNQERISVTNEVHSLWMRANLESDFANKIEIFDEILNRKPEDVEAIAYKADALLEINETAQAIELCNQAIDIDSDYGYAYWQRACAYALTHKHADALADIKMALEYSPNLRNELLHESAFASLHDNDSFNTIVAGEVV
>NZ_CP040559.1|WP_024596283.1|226103_226808_+|purine-nucleoside-phosphorylase
MSTPHISANVGDFAETVLMPGDPLRAQYIAENFLDDAVQVTGVRNMYGFTGTYKGKPVSIMGSGMGIPSMSIYARELIVSFGVKNIIRIGTCGGIGTDIKIRDVIFAQGASTDSNVNRARVRGYDFAAIANFDLLLNGVNAAKELGIEAKVGNVFTTDTFYQADDSFYKDLDKLGMLAVDMETAGLYGVAAEYGANAMALFTVSDHVITGEATPADERQSTFNEMVKIALESIA
>NZ_CP040559.1|WP_138490159.1|224871_226104_+|phosphopentomutase
MARAIILMADSLGIGAAPDADKFGDLGANTFAHLLKAYYDETGAALSLPNLSKLGLVDACEAAGGEPCLISDRQASQGAWGYAKELSSGKDTPSGHWEMAGVPVLFDWGYFPKTQPSFPQKFIDEFIARTGIPGILGNCHASGTTILEQLGEEHVKTGKPICYTSADSVFQIAAHEESFGLEKLYQVCEIARALLDEMNIGRVIARPFLGSNSQDFARTGNRRDYSVLPPAPTLLDVLAKDGGEVISIGKISDIYAHQGITQKHKAPGLMNLLEKTSEVMKSAPEHSLIFTNLVDFDEKFGHRRNPVGYAKALKEFDDYLPTILKQLNADDILMITADHGCDPTFPGSEHTREYVPVIAYKPGMSNTPLGERNSFADIGQTLAQWFNLSALDYGDSFLNELTTPNKKENN
>NZ_CP040559.1|WP_138490164.1|238908_239109_-|alternative-ribosome-rescue-factor-A
MTKKSKAKTVNTSAVDTGRGVINHNALAAMVTSKLFKPQVVKAKKGKGSFKRNNKHSGQESYLIAA
>NZ_CP040559.1|WP_138490165.1|239313_241854_-|TonB-dependent-receptor
MSTYRLNTLAVAVAFAFSAPSIVNAEEAPVQAAKNIEQISVLGSRVSNRTSTESSSPIDLIDADDLTKGGFTELGQSLQATAPSFNFSRTQVSDGSDLFRPATLRGLQPDQTLVLVNGKRRHNQSIFGLNGTVGAGAAGTDMNAIPLTALKGVEVLRDGAAAQYGSDAIAGVINLSLNNSTGITTGFVQYGGTSEGDGDTISAGLNRGFELGNEGGFINLSLEYRDADGTNRAERDTGGSLNVEPGTLSEDVRWGQGNSESEFTSLFYNMALPMGDGELYSFGGYSERTALGNGFYRNFNEASKNVTQVYSDGFLPRIYNEAQDISVALGFKGDINTDWTYDVSAVYGENQYDFTSRNTLNASYAAEYLFNNPDASDADIAANSGPTGGYSGGFRFDQTTVNLDVNGIVDIGRSEPLYVTVGAEYRKENYEIVPGDEASYACGLANMDTSYPSVNDPDQFAQCGFQAYNGLRPEAANDSDRNSYAVYVDVETMITDAWNVSGALRYEDFSDAGDDLIGKLATRYEFSDDFAVRGAVSTGFRAPSLQQSGYTAFTTNLGSDGTLTQSFTANTGTAFPSALGVDSLELETSTNYSAGFVYDVTSELSLTVDFYRVEIEDRITLGSLLSVDDVSFSSEAVAALQATGAVQANYFSNSVDSTTQGVDIIASYRTEVEGGNLGVTFAGNLNDTKIDNVNAEDGIPEAVAFDDLQRSFFTDGQPSERATLTFDYERDAYTSTIRFNYFGETDVKYFGNDHISLPGELSPTGSFKPTSTVESAVLVDLNVSYQINDMFALSVGADNVFDETPDELGDDEVLNFITNGAFKYPVRALPYGFDGRTYYAKVSFSF
>NZ_CP040559.1|WP_138490166.1|242109_243063_-|HAMP-domain-containing-histidine-kinase
MDGSDGNFERAFLNEQKLRLAAEQLLKDKSSVLVAINNELQKKVADLEHQQMLFVQTEKMATLGTLSAGVAHEINTPLAYAMSNVESLQNASPLLVALLKLNEQYLNNEIKESRFKHEIDILNLQYPYAWIYNNLQGQINDSVEGLKRIKQIVHDLLNFAHPTSSQDKQLADVTTGANNALRLLSSKLKLCEIKTRFEPLPLIWCNLSSINQIFVNLLMNAWQACELDLEKGCIIEVNIFELNTNICIEIKDNGCGMNEDTIAHMFDPFYTTKEVGKGTGMGMTLVYAMVSDHGGKIEVNSILGTGTTIRCLLPLKV
>NZ_CP040559.1|WP_138490167.1|243296_244625_+|response-regulator
MTQVTPSTPINQVDVLCIDDDEIVLRTLTRLLEVNGLSVIVCDNPQSALTLFKNHEFGLIISDMRMPVMNGAEFLEKARALAPDTQRILLTGYADIQTTLAAVNQGQINGYIQKPWQNDLLLRSIRDSLEKFALKKQNQKLEAQVKAQNQELLELNNSLEQRVEKRTLQIKQVLKKLEDANEREKQEHKSTVELLYNFVNANPYLDGNKAQNIANTCTQIALYLNLSQKSIDLAPMAGYLAQIGLLAMDPDLYKKPVNRLNEQQRKTFYTHPSTAQLMLMPAIHLHDLSDAIYYQFERFNGNGMPKGLAGNDIPIGAMVLGLARDYWDAFEQSNASDEKQRHDDALESVKLYSGSFYHPKIVRALEASHAKLHEQKSSAGSVLICNAHELKEQMVLGHALHSHTGIMLLPKGHVFGSKSIEKLQQLESKKPAPFRIMVKTAK
>NZ_CP040559.1|WP_138490168.1|244699_245719_+|ferrochelatase
MSRFSAVTDNPHDGRFNQKTGILLTNLGSPDAPTAAALRTYLREFLSDPRIVEIPRLVWMIILHGIILRVRPKRSAKLYESIWTENGSPLTHITRQQSVKLNILLKEQGYTNTEVVMAMRYGNPSIEAGLEELRDKGLTRIIILPMYPQYSSPTTGSTFDAVSSVLRKWRWVPELHFINGYHKNTRYIESLANSISEDLEANGMPQKIVFSYHGMPKLFLDRGDPYHCLCLQTTRLVVEKLGLDKDKVISTFQSRFGKAEWLKPYTDATLAALPDEGITDVAIISPAFSADCLETLEELEGENREIFENAGGEKYRYIAALNDRDDHIEAVFDVIKPML
>NZ_CP040559.1|WP_002962108.1|246188_246509_-|hypothetical-protein
MQINDDKKIRLMYRIEPGCLGPKGAEHIEDFCRFANKHIKSPFYGQFVFLPRYDKTIDERQYSVNSRNLSLAQARAYLKHFDINIEEFEEQLDELLTKAIDLYFKR
>NZ_CP040559.1|WP_138490169.1|246518_247262_-|hypothetical-protein
MKPLSIILASLVTTVALITYAAEQSEPEKKEPQVETQTSVEKPKVENEQSVTQTNTDDKVNTLEYKAPELKKPTIDATKPDDSKVLGNEQIKPAEKPKNKIEKAVAVAEAEKAVTQAKEALTVKQQTKAKQSRESLAVVEQLVKAYNARNIEEFLRVYAEDVEFYIFPNELLFKGKEKLIERYGLMFKKLKCIHSSPIKRIVHGDIVIDHELSETCSTDENVVDKRSELISSYQIKDGKIVRVLFFR
>NZ_CP040559.1|WP_138490170.1|247512_248256_-|ferredoxin--NADP-reductase
MSNWVEATVKNVTWWSETLFSLTVNANVEPFKAGQFTKLSIMDGDKRIARAYSYVNAPENPDLEFYLINVIDGLLSPRLATLQPGDTVLIEQHATGFFTLDEIPQSDQLWMLGTGTAIGPFLSILQQPDVWKKYKTINLVHGVRFNNDLSYQALINELLRVYPAQLNYIPVVSREEPLQGLSGRITNAIESNRLFEHVKLNPKPSNAQFMICGNPQMVKDTTALLLDKNFTRNRRKNPGNITVEQYW
>NZ_CP040559.1|WP_076914907.1|248768_250367_-|ABC-F-family-ATPase
MISTANITMQFGAEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALVPSAGNVSITPGLKVGNLSQDQFAFEQYSVVDAVIMGDVELWKVKQERERIYSLPEMSEEDGMKVADLESVFAEMDGYTAESRAEEILLEAGIDKEFHYGLMANVAPGWKLRVLLAQALFANPDILLLDEPTNNLDIHTITWLANELNKRKCTMIIISHDRHFLNSVCTHMADIDYGELRIYPGNYEKFLEAAGLQREQLLAENAKKSAEIDELQDFVNRFGANASKAKQASSRAKKMDKIKLDEVKSSSRMSPSLSFDEGKKMYRQALEVNKLGHGFDGETLFSGGDFLLEAGAKLAVIGENGVGKTTFLRCLVDELKSNEGEIKWSENASFGYCPQDSTKDFDNDLTLFDWMSQWRTAKHNDLMVRGMLGRLLFTADDSNKKARNCSGGEKNRLLFGKLMMQDVNVLVMDEPTNHMDMEAIEALNNALKDFQGTLIFVSHDREFVSSLATRIIDIKDKKVIDFQGTFDEYLASCEEKKA
>NZ_CP040559.1|WP_138490171.1|250658_251399_-|transporter-substrate-binding-domain-containing-protein
MKTLFLAFTTLLFTQFNALACTKTLVMGTNETNWPPYLVKQGDTFLGTEVDAVRAIFKNSKFCIKWTYFPSFSRVQAELKNGRVDITYAASYTDQRAQYAHFSLPYREEIMLLYKHKDSADVTSLADLFSQDFTAGINRGSFFGDELEQLKTKYSKQVVLTAQANNRFSMLDKKRIDYVIEDSVVAQYFVKKHSSISQVKTITPINVNNVHFMLSKESLTLDDVATVNQLITKNEAAIKSIYQPMH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

268536 : 311609

Clostridium_phage(33.33%)

coat,transposase,integrase

attL 275644:275659|attR 306270:306285

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138490180.1\|268536_269520_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_138490181.1\|269881_271381_-	DUF2235 domain-containing protein	NA	NA	NA	NA
WP_138490182.1\|271498_273589_-	cupric reductase	NA	NA	NA	NA
WP_002962796.1\|273726_275031_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_138490183.1\|275277_277206_+	RecQ family ATP-dependent DNA helicase	F2NZ48	Diadromus_pulchellus_ascovirus	2.4e-56	39.0
275644:275659	attL	NA	NA	NA	NA
WP_002962790.1\|277251_277560_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_138490184.1\|277632_279252_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	6.7e-20	26.9
WP_024597791.1\|279477_280095_-	glutathione S-transferase	NA	NA	NA	NA
WP_002962785.1\|280145_281174_-	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_138490185.1\|281353_281848_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_138490186.1\|281997_283203_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_010554987.1\|283244_283730_-	hypothetical protein	NA	NA	NA	NA
WP_138490187.1\|284344_285751_+	DUF4041 domain-containing protein	X5JAC1	Clostridium_phage	8.3e-35	37.6
WP_138490188.1\|285761_287024_+	DUF4041 domain-containing protein	X5JAC1	Clostridium_phage	4.4e-27	40.4
WP_138490189.1\|287301_287970_+	hypothetical protein	NA	NA	NA	NA
WP_138490190.1\|288043_288340_+	hypothetical protein	NA	NA	NA	NA
WP_138490191.1\|288431_289592_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.4e-19	26.1
WP_138490192.1\|289811_290141_+	hypothetical protein	NA	NA	NA	NA
WP_138490193.1\|290155_290629_+	hypothetical protein	NA	NA	NA	NA
WP_138490194.1\|291237_292416_-	hypothetical protein	NA	NA	NA	NA
WP_138490195.1\|292841_293426_-	hypothetical protein	NA	NA	NA	NA
WP_138490196.1\|293560_293938_-	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_138490197.1\|294364_295075_+	hypothetical protein	NA	NA	NA	NA
WP_138490198.1\|295062_297051_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_138490199.1\|297047_297755_+	AAA family ATPase	NA	NA	NA	NA
WP_138490200.1\|297988_299632_+	hypothetical protein	NA	NA	NA	NA
WP_138488686.1\|299762_300803_+\|transposase	IS481 family transposase	A0A077SLK2	Escherichia_phage	4.2e-177	83.5
WP_138490201.1\|301819_302212_+	hypothetical protein	NA	NA	NA	NA
WP_138490202.1\|302244_303507_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_138490203.1\|304203_305079_-	hypothetical protein	NA	NA	NA	NA
WP_138490204.1\|305041_306076_-	hypothetical protein	NA	NA	NA	NA
WP_138490205.1\|306373_307468_-	porin	NA	NA	NA	NA
306270:306285	attR	NA	NA	NA	NA
WP_138490206.1\|307469_308057_-	DUF4956 domain-containing protein	NA	NA	NA	NA
WP_138490207.1\|308058_308973_-	polyphosphate polymerase domain-containing protein	NA	NA	NA	NA
WP_138490208.1\|309050_311609_-\|coat	spore coat protein CotH	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP040558

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP040559

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection