CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP040507	Arcobacter butzleri JV22 chromosome, complete genome	1 crisprs	PrimPol,DEDDh,WYL,csa3	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP040507_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040507_1

861379-861476

Orphan

Consensus_repeat	Method
CGTGTCTACCATTCCACCATATCCGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040507_1

>merge|NZ_CP040507|1|861379-861476|CRISPRCasFinder
CGTGTCTACCATTCCACCATATCCGCAATTCTAAATTTAACACCACTTATTTGAAAGTTACCTCAAGATAGCGTGTCTACCATTCCACCATAACCGCA

>NZ_CP040507|1|1|861379-861476|CRISPRCasFinder
CGTGTCTACCATTCCACCATATCCGCA	ATTCTAAATTTAACACCACTTATTTGAAAGTTACCTCAAGATAG
CGTGTCTACCATTCCACCATAACCGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040507.1\|WP_004509930.1\|858956_860285_-\|DGQHR-domain-containing-protein	unknown	unknown	gnl\|CDD\|319270
NZ_CP040507.1\|WP_004509929.1\|860294_860966_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040507.1\|WP_004509920.1\|869989_871180_-\|Na+/H+-antiporter-NhaA	unknown	unknown	gnl\|CDD\|184855
NZ_CP040507.1\|WP_004509923.1\|866983_867928_+\|imelysin	unknown	unknown	gnl\|CDD\|378170
NZ_CP040507.1\|WP_138625979.1\|857065_857941_-\|replication-endonuclease	unknown	unknown	gnl\|CDD\|336220
NZ_CP040507.1\|WP_004509939.1\|853253_853637_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040507.1\|WP_138625981.1\|862089_864168_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040507.1\|WP_004509921.1\|868840_869977_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|224771
NZ_CP040507.1\|WP_138625980.1\|858143_858935_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040507.1\|WP_004509936.1\|854951_855197_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040507.1\|WP_138625978.1\|853788_854955_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP040507.1\|WP_004509924.1\|865586_866987_+\|thiol-oxidoreductase	unknown	unknown	gnl\|CDD\|226019
NZ_CP040507.1\|WP_004509918.1\|871666_872593_+\|zinc-ABC-transporter-solute-binding-protein	unknown	unknown	gnl\|CDD\|238500
NZ_CP040507.1\|WP_004509925.1\|864265_865621_+\|imelysin	unknown	unknown	gnl\|CDD\|271140
NZ_CP040507.1\|WP_004509935.1\|855361_856630_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224588
NZ_CP040507.1\|WP_004509940.1\|852929_853244_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040507.1\|WP_134815791.1\|856632_856884_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040507.1\|WP_004509919.1\|871169_871544_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_CP040507.1\|WP_004509922.1\|867935_868841_+\|sterol-desaturase-family-protein	unknown	unknown	gnl\|CDD\|225546
NZ_CP040507.1\|WP_004509928.1\|861603_861918_-\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|181444

Protein	Function_ID	Function_description	E-value
NZ_CP040507.1\|WP_004509930.1\|858956_860285_-\|DGQHR-domain-containing-protein	gnl\|CDD\|319270	cd16413, DGQHR_domain, DGQHR motif containing domain. Uncharacterized diverse domain family with conserved DGQHR motif, in addition to QR and FXXXN motifs. Some proteins have been identified as parts of DNA phosphorothioation systems. Related to dndB, which acts in the regulation of DNA modifications, including DNA phosphorothioation. These proteins show similarity to the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system, and other members of the ParB/Srx superfamily.	1.77915e-20
NZ_CP040507.1\|WP_004509923.1\|866983_867928_+\|imelysin	gnl\|CDD\|378170	pfam09375, Peptidase_M75, Imelysin. The imelysin peptidase was first identified in Pseudomonas aeruginosa. The active site residues have not been identified. However, His201 and Glu204 are completely conserved in the family and occur in an HXXE motif that is also found in family M14.	2.52626e-19
NZ_CP040507.1\|WP_138625979.1\|857065_857941_-\|replication-endonuclease	gnl\|CDD\|336220	pfam05840, Phage_GPA, Bacteriophage replication gene A protein (GPA). This family consists of a group of bacteriophage replication gene A protein (GPA) like sequences from both viruses and bacteria. The members of this family are likely to be endonucleases.	1.03348e-09
NZ_CP040507.1\|WP_004509921.1\|868840_869977_+\|c-type-cytochrome	gnl\|CDD\|224771	COG1858, MauG, Cytochrome c peroxidase [Inorganic ion transport and metabolism].	1.61957e-96
NZ_CP040507.1\|WP_138625978.1\|853788_854955_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.8874e-23
NZ_CP040507.1\|WP_004509924.1\|865586_866987_+\|thiol-oxidoreductase	gnl\|CDD\|226019	COG3488, COG3488, Predicted thiol oxidoreductase [Energy production and conversion].	7.40386e-135
NZ_CP040507.1\|WP_004509918.1\|871666_872593_+\|zinc-ABC-transporter-solute-binding-protein	gnl\|CDD\|238500	cd01018, ZntC, Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).	5.17183e-112
NZ_CP040507.1\|WP_004509928.1\|861603_861918_-\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|181444	PRK08482, PRK08482, F0F1 ATP synthase subunit C; Validated.	1.02239e-36
NZ_CP040507.1\|WP_004509935.1\|855361_856630_-\|hypothetical-protein	gnl\|CDD\|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	1.70412e-09
NZ_CP040507.1\|WP_004509920.1\|869989_871180_-\|Na+/H+-antiporter-NhaA	gnl\|CDD\|184855	PRK14853, nhaA, pH-dependent sodium/proton antiporter; Provisional.	0
NZ_CP040507.1\|WP_004509919.1\|871169_871544_-\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	7.97062e-23
NZ_CP040507.1\|WP_004509922.1\|867935_868841_+\|sterol-desaturase-family-protein	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	1.52568e-20
NZ_CP040507.1\|WP_004509925.1\|864265_865621_+\|imelysin	gnl\|CDD\|271140	cd14657, Imelysin_IrpA-like, Imelysin-like iron-regulated protein A-like. This family includes putative iron-regulated protein A (IrpA) mainly from Bacteriodes, proteobacteria and cyanobacteria, as well as uncharacterized proteins with domains similar to insulin-cleaving membrane protease (imelysin, ICMP) protein. IrpA has been shown to be essential for growth under iron-deficient conditions in the cyanobacteria Synechococcus sp. The conserved GxHxxE motif is similar to other known imelysin-like proteins that are regulated by iron, such as ICMP, IrpA and EfeO. Imelysin is a membrane protein with the active site outside the cell envelope. The tertiary structure shows a fold consisting of two domains, each of which consists of a bundle of four helices that are similar to each other, implying an ancient gene duplication and fusion event.	6.75612e-142

>NZ_CP040507.1|WP_004509929.1|860294_860966_-|hypothetical-protein
MSYKKHFLTTYLLLSLNLFADGYEECSKLDKLNHNSIIQKEIIINCNDNIHKTSKDTSFDLEIKLINQKISIVENKVNDKLNDFEKNISQQYNIMDWWLKLTSLIVTIAAGLLIFLGFKTKKDITDDIISRTESKINIKMDNIRSETNVNISEIKSQLLQQDFRSFDNIRVDILKNIDETIINRFEAYDIMINEFQTKLEEIQNNKNTPMGNVDKSKHDDPFE
>NZ_CP040507.1|WP_004509930.1|858956_860285_-|DGQHR-domain-containing-protein
MNKKYFVIELNAIQQFESKVLFGSIKYSDVNLSSKLSARNKSEDEFQREPQQKDYTKIKSFIKERLSKKHKEKLPIFPTPLILDVNIETDFYINNNIIEIEKYFEDQYSTYLEFNELKKELKLLENKDENKEKIYELESKLASYPKFKGLIFEKNKGEKYDLYIPLFEENFELNPILIVDGQHRFLGLKEFFKETDLLTTNTKPDNFSFLVTYLITNDMYEQAIIFSDVNFNQKPVNKSLMYDILSVVPFEKNQALFSHFIVKRFNEDEEFKGIVKMLGIGNGIISLAFMVETIKDKLLTKSCPKLFDIYENDYIKENGNRHKHIPDIFIDYFKFIKRNFSKYFPNKNHKNEYNVKDYNSILFKTTGIYALLLLLKDLINNYNLNLLTYQEDEFNEILEKAFKEIIKKQTNLFNENSRYSKAGSAGLQRELYLELKELLILS
>NZ_CP040507.1|WP_138625980.1|858143_858935_+|hypothetical-protein
MKTELLKLIDLQDASYYVWKNKTKKKLIWFFHKYFLESDIKEFNERNQIIKLDFLYSSSVVGCYTFCEYFEELIDNEQHLETFVKYLISYKKEHDLDFLGGQIPVEIDFDYEEIIKLKNMFVLGVRQYQVDSNFHNEFSYLNHFITKCSISDFLFIHHNILNNFKLMIDILDKNVSFNVSEDILSFGNKRNPIIKDLLYKFLIKFYIRLYNLDENNFRFKSSEMKFKKIKSFCDKKFKSDRMIDILDITRNEEIIKEYNERRN
>NZ_CP040507.1|WP_138625979.1|857065_857941_-|replication-endonuclease
MEHIKQALYKYSLYKEKQQSNYLKNQQNLKNIKTGEILTLNYSLDLKQKEYVKTIEQKVNALVSLAIAQNLKPIFITLTVPSEFHPNKTLKNGVIVINKKYKFIKLDDAIVEAYEELKTIYRTFYKRLKNFSKNIYYIKITEPHQSLIPHMHILLFIQREQQKNTKKLFLKIYKEYKLQRVDYDESILNDNLKNVVGYIMKYILKTINSNDEFFKRWLDGWRKKYKIRACEMSNLPISIEIYKKLYYNLPQDIKESIQKEIALNKQSFFEYFIQNTEVHQIIYSEKEDKNM
>NZ_CP040507.1|WP_134815791.1|856632_856884_-|hypothetical-protein
MTKIIASGRIEHIQIKDFQGVKTTVVQMINKSEKKGFEIIKIKLTDESVIVKDGDLVNIPVSISAMNNSIFYTQNGKIEILKA
>NZ_CP040507.1|WP_004509935.1|855361_856630_-|hypothetical-protein
MFGAFYRYFVRFFILNLAFFLSIFSFEYYLNSESLSHYSGLKTIFHLKDIIENYQVNSILLDFYISIFFAINLYLLIWFIRYFKYLNLPYAINIYQDVKQIEGMQKKYKSSHDSFRKKVKTHNGYKLFYKNWVSISLDSYNEKKKEIIQYLGFDGEINIKPWDKRGVELTFYKLPTVIEASLLDYKQGNINYGFGRNGNYYIPFENLIHTICVGESGSGKSNMMHHLLQSIILNDGIIEKVELIDLKGTELYRYRDVDYMDFIDDINQIKEKFLYLKEVMNSRFQLMKEKNLQLFNGKFYCVFIDEVGTIGTFPNKKLRDEIFDLMIELFQKGRAARIIFFIFAQKIDSTNIPSNVLANIPTKVLMKTDSDFNINNSIGTKESLEKITLTDPDSFNKGRAILKDGYTSEKILLQIPFIRFKD
>NZ_CP040507.1|WP_004509936.1|854951_855197_-|hypothetical-protein
MNTNEYIELKQLLSELKNMIRILVPQTASISYLSDLTGKSRQSIRQLLINNFEPEVDYWNKGGKIFVSQRVAIIILTRSSK
>NZ_CP040507.1|WP_138625978.1|853788_854955_-|site-specific-integrase
MNNRIKGDGLFKIRNNVIYVHCSLNGVFYRKSTGKKVTPATKQWIKKANPLEELEKLLNKEKNMITTNNFEKFAKMVLDITSSRRQQYSQKELERLFEKRILPSFKGCNLEDIRPLDIVNLLEKQKKEVCNDRVKRIRNLLNIIFDYAYDNDLIQKNPVQSRSVKSINLSYSPKSTKAYTTEEISIILKNAKGWFKIFIELSFKLGLRTGECMALKWSDFNFETEKLFLQRSITKGVITEQDKNSLSNKNHFRIIQLFPDLVKLLKTYYEVRPSDEWLFINKDGRYYRESKTIVDYHLKPLLKKINVEYKTLYATRRSYASVMSYGGENLENIQMIMGHTKGSKITERHYIDPRILKLEHDKLNAQKQQDIFNMMIEVENENFQSKLS
>NZ_CP040507.1|WP_004509939.1|853253_853637_+|hypothetical-protein
MFKQVKSAVFWYYLYKFRKRVTLIFLLLIIALFANVIYADIVEYLKLKEKLEYLEIALISKWLIIIFNIGISIYLILTLFKKEETGSSKKEKIVEKETFKKEKFTQREKEFLNKKNIRSKADILLDK
>NZ_CP040507.1|WP_004509940.1|852929_853244_+|hypothetical-protein
MGIKDKLKENSNKLINIASENATKAFDYPKIKSQQLKDAINLKIREKAILSTKARLIENHKTFDDFSDEDLEIIIADEERKIIDDLKTKSLVVALAALGLNFFV
>NZ_CP040507.1|WP_004509928.1|861603_861918_-|F0F1-ATP-synthase-subunit-C
MKKIVLLMLAIAGIAFAADEAVVNETLKAYSVVAAGIGLGLAALGGAIGMGNTAAATIAGTARNPGLGGKLMTTMFIALAMIEAQVIYALVVAMIALYANPFLG
>NZ_CP040507.1|WP_138625981.1|862089_864168_+|hypothetical-protein
MKKIIISTTFLIILIVVSIYGILFTKKGNGFISSYLENRVNEEQKDLNFKINNFTLTTKDVDFEATLNENSYINISGALSLFKKNVDLKYDIKIEDLSIFKDLISEDLKGTFFTNGIFKGSESESIIQGFSNIASSETKYYMNLVDFKLKDIYLDLKDARIDELLAIFNKPLYANGNLNLNANIKNIDKNSLDGLFIANISKGLINNDIFNKEFNQKINTKISFNGDINASLLGNIIEVKSDMTSSVADIFFDKTLIDIEKNTIQSDYKIDVKNLAKLEGLIGKKLQGEFLTTGNILKDNKNISVDGNSDIFDGFFTYKFELKDYEIQNLNLNIEKAKLEKIFFMLNEPIYAVGNLELHSDIKNSNIENLDGSSSIKISDAKIINEVVNTVFKKNLKDLITFKSEIKTSYISNQAISQIDVNSNIVQLNMNKAIYDFSKNTFNSDYNLNVFELEALESFTKVKMRGAIDVVGTIENSENYFKINGNSNLASGQMNFNLINHDLVLNLNNANLKDITYMMFQPEIFDSKTNLDLKYNLLDEKGTLNANLLGGRFLENNFTNIVNQLAKYDLTKDVYETAVLSSKIDSKKFITDLTMKNKNNQIEIKDSLVDFDKNIIDAKIDTKIKNNSFFVLVKGDMNKPTISLDVKNFLKNKIDKKIEDNKDKIEEKLNKVLKDKDSEKTKELIKNIKSLF
>NZ_CP040507.1|WP_004509925.1|864265_865621_+|imelysin
MIKSTKKVLLSVSVVASLALTSYAATNNNEVKKVEVAKQASILEAYANIALDNYTNALKDAKNLKVAIDKFAKAPTQENFDAAKKAWLDSRESYGSTEIFRLSNGPIDAEEGWIADAYGALEGQINAWPLDENMIDYTVDAEGKLTSGNIIDTVGKFNPGGEDSKEVDVTKITVDALTDLNENGGEANVSTGYHAIEFLLWGQDQDYANFMDDNVTKGPMTAGQRPLTDFTTDKNSQRRLAYLKASSEKLVKDLETVTSAWKKEIKGNQGLYQAALLGKLKGKDKDKNIDQKEALKQIIAGMGVFIKSELANERIAVAVLTPSEEDEHSCFSDNTHRDLVKNYEGFKNVLTATYNGKKYGKSLFDAVDKETKERIEKLMSSIEEKIESVDRIAKTEAHFDYQIRPDHEQSKVLIKLKNELRKLGDEMVNVASANGISLSTDDVTDPEETKI
>NZ_CP040507.1|WP_004509924.1|865586_866987_+|thiol-oxidoreductase
MMLQILKKQKFNDSLKRVIFIKSLVAIFATGLFAVNSSSDFLSTNKNSSLLTSPKKGLNNEEHDKFMLGRSFFSIPWVEAPSVTTARDGLGPLFNANSCISCHPKNGRGTLFTKNNLPSRALIARLSIKSDDSLEHKELLKYQGFVPEPVYGNQLAINGIFGVDFEGKIKIDFEEKEVVFPDGEKQVLLKPKYSLTDLNYGDLHKDVNISYRIAQTLNGMGLIALISDEDILANEDVDDKDGDGISGRANWVYSKITKKTELGKYTWKASVAFLKEQIANAASNDIGLTTSVNPSENCTDFQEACKNAPKAKDSIDLPDERLDSIAFYLKNIKSYTLKNTKEYNEGLALFEAVSCSKCHITSFNTKEGFKISPFSDFLLHDMGEDLSDGRVEFLASQNEWRTAPLWGLALHKKINKEEPRLLHDGRARSYQEAILWHGGEAQNSKESYMNLPKEKREKLIKFLEEL
>NZ_CP040507.1|WP_004509923.1|866983_867928_+|imelysin
MIKKFLFLMIFSICAFAQDSALFNIVKNVSIPDVETAIKDAKALKANYSDENFTNFIRAWKKVEALYFAGEIDDDYLDTPRYMDVFNNLKEDLNSQMQRVIDSNDDPKKALFKNSFKTVNALEYVLYSDKTITDRKKAIAGVIIDSLVSKLEDIKGAYEEFLTSKPKDEKFDTAIVINTLIASTYRLKEWRIGNASGSSSKFKNDPNNNRAEYFLSQNSFAAIDAILDAQKEILEDKNYYNFASLSKKLNAQKELKVALDKIIETKEKLSKLKKDDFSKAQDLFESARALHNAYYLSLIDKLGLKANVLDADGD
>NZ_CP040507.1|WP_004509922.1|867935_868841_+|sterol-desaturase-family-protein
MNDFFALEYLVNPSKRLFWIYLLSSIFLAIVYFYVTKKNSRLITSSKLWLHPSAKLDYYYFFLSYFINILLLVPFIVSAKTVALFVNKELYFYFDYYDNSFFSYKQIVLMYTISIFVVSDFTRYWLHRFLHTIPFLWEFHKIHHSAKVLTPITFYRVHPVENFLFGLRYSLSVGFVTGIFIYFFGAKVDIYMVFGVNIILFVFSLFGSNLRHSHIPFSYGEFIEKWLLSPKQHQIHHDKKHFNKNFGGYIAIWDRLFGSLTLSKDVKVLKFGLRREQMKDYLSLKYLIIRPFINLLKRRGI
>NZ_CP040507.1|WP_004509921.1|868840_869977_+|c-type-cytochrome
MKNLRLFFIVGLMFSALMAEDMKKEDLGRILFFDVNLSKNRTQSCATCHNPNAGFVDDRDNGVKKMASLGDDGKSLGDRQAPTASYAKFSPTFHFDEKAKKYVGGQFWDGREATLEGQAGGPPLNPVEMGMSDKKAVVDRLKENTLYVDSFKKIFGADIFKNDDKAYEAMTIAIASFERTDEFSPFDSKYDRYLKGEYDLTPLEDLGKSIFFSNNNNSCANCHVLKGEDKEGETFTNYQYHNIGTPANNELRAKNGVKAIDEGLLANSNVSDVAQKGKHKVPTLRNVAVTGPYMHNGVFKDLKTVVEFYDKYNNKDRNIDPETNKPWDEPEVKDNISLQELKANKLTDRKVEALVAFMKLLTDKKYEHLLEEQEKKEK
>NZ_CP040507.1|WP_004509920.1|869989_871180_-|Na+/H+-antiporter-NhaA
MKNSLFLIKDFISKETLSGLILFVVTVLAVTIANSDFGSYYFELFSTQLGITFGQLNASMSLLHWINDVLMAIFFLVVGLEIKREMLIGELSSVKKASFPIIAAIGGMIVPAILYISLNPDHITGFGVPMATDIAFALGILMLLGNKVNPAIKLFLVTLAVVDDLGAIVVVAIFYTNELHFEYFLYAFAVYSIIWFLNYKNVQKLTPYIILGVFLWIFIHKTGIHSTIAGVLLAFAIPLNKKADLEESVENLSVDNPLVKLEHALHNFSAFIIMPLFAFANAGVIIDFSNVIEHQLIVLGVAIGLIIGKPIGIFSFTYLATKLKISVKPENVTWNDIFAVGFLGGIGFTMSIFISHLAFSDQTIVGAVKLGIFASSVIAAIIGSVLLILKAKKVQS
>NZ_CP040507.1|WP_004509919.1|871169_871544_-|transcriptional-repressor
MNITDFTHIKLTNARKAILEVLIDSNKPLSYEDIKDFISMDKATFYRNVAIFEEENLINSFESNDKKRYFEIKKNQHSHFICTNCSKIECIHEKLNLTLPEYKIENIIIKGICKECLKKEKNEK
>NZ_CP040507.1|WP_004509918.1|871666_872593_+|zinc-ABC-transporter-solute-binding-protein
MKKFLVLFLVFASFLYANKPQLTVNILPQKYFVEKIVKDKFDINVMVKPGSSPHNFEPKPSQMKSLASSKAYFLVGDPSEQAWIGKFKQNAKDTLFVDTTVGIERIPMVAHKHHDEEDEDEHEGHAHHEHEDEHEHEKHAEHDHDESGLDPHTWLDPISVKVQAKNIYETMLKIDQKNSDFYKANYEEFVKELDSLDTEIKNILAPYKDKAFMVFHPSWGYFAKRYDLEQISIEMEGKEPKPNELVKLVEEAKKHDIKIVFVAPQFSQKSAKTISQSIGANVVSIDPLSGDWKNDLLKTAKEIANSYK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

441081 : 448851

Indivirus(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004510489.1\|441081_442269_+	exodeoxyribonuclease VII large subunit	A0A1V0SIT1	Klosneuvirus	3.4e-45	38.8
WP_004510490.1\|442342_442822_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_004510491.1\|442849_443383_-	peptidylprolyl isomerase	A0A1V0SCU1	Indivirus	1.2e-29	46.5
WP_004510492.1\|443536_443920_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_004510493.1\|443912_444233_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_004510494.1\|444237_445098_+	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	4.3e-10	26.8
WP_004510495.1\|445234_445492_+	co-chaperone GroES	A0A221S3C8	uncultured_virus	4.7e-13	44.2
WP_004510496.1\|445491_447126_+	chaperonin GroEL	A0A240F779	uncultured_virus	4.0e-174	63.8
WP_004510497.1\|447474_448851_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	1.2e-17	28.0

DBSCAN-SWA_2

1273462 : 1318754

Ralstonia_phage(13.33%)

tRNA,transposase,plate,integrase,tail,capsid

attL 1284761:1284778|attR 1297369:1297386

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004509522.1\|1273462_1273879_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_004509521.1\|1273871_1274594_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.1e-26	29.7
WP_138626021.1\|1274605_1276540_-	EAL domain-containing protein	NA	NA	NA	NA
WP_004509517.1\|1276543_1277275_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_004509516.1\|1277297_1277831_-	GNAT family N-acetyltransferase	D0R097	Streptococcus_phage	4.2e-56	56.3
WP_004509515.1\|1277908_1280599_+	DNA polymerase I	A0A142F1Q9	Bacillus_phage	6.2e-63	31.4
WP_004509514.1\|1280670_1281363_+	response regulator transcription factor	NA	NA	NA	NA
WP_004509513.1\|1281395_1281593_+	hypothetical protein	NA	NA	NA	NA
WP_004509512.1\|1281593_1282412_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_004509511.1\|1282416_1283715_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004509510.1\|1283813_1284806_-	hypothetical protein	NA	NA	NA	NA
1284761:1284778	attL	NA	NA	NA	NA
WP_004509509.1\|1284877_1285453_+	hypothetical protein	NA	NA	NA	NA
WP_004509508.1\|1285439_1287674_+	hypothetical protein	NA	NA	NA	NA
WP_138626022.1\|1287684_1289697_+	5-histidylcysteine sulfoxide synthase	NA	NA	NA	NA
WP_138626023.1\|1289705_1290182_-	hypothetical protein	NA	NA	NA	NA
WP_004509501.1\|1291092_1291626_-	hypothetical protein	A0A0R6PI79	Moraxella_phage	2.6e-45	51.9
WP_004509500.1\|1291636_1292287_-	S24 family peptidase	A0A0M3LPF9	Mannheimia_phage	1.8e-16	31.8
WP_004509498.1\|1292876_1293383_-	hypothetical protein	NA	NA	NA	NA
WP_034226605.1\|1293530_1293758_+	hypothetical protein	NA	NA	NA	NA
WP_004509496.1\|1293759_1295865_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A0M4U788	Ralstonia_phage	6.6e-36	29.4
WP_004509495.1\|1295936_1296635_+	AAA family ATPase	NA	NA	NA	NA
WP_004509494.1\|1296624_1297257_+	hypothetical protein	NA	NA	NA	NA
WP_004509493.1\|1297226_1297466_+	hypothetical protein	NA	NA	NA	NA
1297369:1297386	attR	NA	NA	NA	NA
WP_004509492.1\|1297575_1297827_+	hypothetical protein	NA	NA	NA	NA
WP_004509491.1\|1297889_1298546_+	DUF3164 family protein	J9SHK0	Pseudomonas_phage	2.1e-20	33.5
WP_004509490.1\|1298532_1299123_+	hypothetical protein	M5AAF4	Nitratiruptor_phage	9.8e-38	42.1
WP_004509489.1\|1299122_1299317_+	hypothetical protein	NA	NA	NA	NA
WP_004509487.1\|1299619_1299832_+	hypothetical protein	NA	NA	NA	NA
WP_004509486.1\|1299812_1300118_+	hypothetical protein	NA	NA	NA	NA
WP_004509485.1\|1300110_1301016_+	helicase DnaB	NA	NA	NA	NA
WP_004509484.1\|1301126_1301528_+	DUF1018 domain-containing protein	NA	NA	NA	NA
WP_004509483.1\|1301819_1302932_-	hypothetical protein	NA	NA	NA	NA
WP_004509482.1\|1303081_1303357_+	hypothetical protein	NA	NA	NA	NA
WP_004509481.1\|1303348_1303834_-	phage virion morphogenesis protein	NA	NA	NA	NA
WP_034226727.1\|1304043_1305219_-	hypothetical protein	Q6QIB9	Burkholderia_phage	2.9e-33	41.2
WP_004509479.1\|1305211_1306603_-	DUF935 family protein	M4M9P3	Vibrio_phage	9.8e-12	23.9
WP_004509478.1\|1306603_1308328_-	hypothetical protein	Q6TM76	Pseudomonas_phage	1.5e-73	36.3
WP_004509477.1\|1308314_1308821_-	DUF1804 family protein	NA	NA	NA	NA
WP_004509476.1\|1308820_1309222_-	DUF1320 family protein	NA	NA	NA	NA
WP_004509475.1\|1309344_1310328_-\|capsid	major capsid protein	NA	NA	NA	NA
WP_004509474.1\|1310337_1310775_-	hypothetical protein	NA	NA	NA	NA
WP_004509473.1\|1310787_1311585_-	hypothetical protein	NA	NA	NA	NA
WP_004509472.1\|1311577_1312018_-	DUF1834 family protein	NA	NA	NA	NA
WP_004509471.1\|1312193_1312520_+	hypothetical protein	NA	NA	NA	NA
WP_004509470.1\|1312512_1312740_+	hypothetical protein	NA	NA	NA	NA
WP_004509469.1\|1312837_1313155_+	hypothetical protein	NA	NA	NA	NA
WP_004509468.1\|1313151_1313883_+\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	1.2e-08	34.1
WP_004509467.1\|1313882_1314188_+	hypothetical protein	NA	NA	NA	NA
WP_004509466.1\|1314195_1315371_+\|plate	baseplate assembly protein	V9IQV9	Stenotrophomonas_phage	9.8e-05	31.1
WP_004509465.1\|1315342_1315981_+\|tail	phage tail protein I	A0A077KER5	Ralstonia_phage	1.1e-07	26.1
WP_004509463.1\|1317059_1317566_+	hypothetical protein	NA	NA	NA	NA
WP_004509462.1\|1317587_1318754_+\|tail	tail protein	A0A1X9SGY4	Bradyrhizobium_phage	5.2e-06	25.5

DBSCAN-SWA_3

2011274 : 2018199

Campylobacter_virus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004510940.1\|2011274_2012267_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	1.6e-32	35.3
WP_004510941.1\|2012382_2012727_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_004510942.1\|2012737_2013673_-	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_004510943.1\|2013730_2014990_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_004510944.1\|2015106_2015337_-	acyl carrier protein	M4QDG5	Prochlorococcus_phage	5.4e-08	66.0
WP_004510945.1\|2015433_2016177_-	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	1.9e-17	31.0
WP_020848501.1\|2016234_2016999_-	7-carboxy-7-deazaguanine synthase QueE	H6SUE5	Campylobacter_virus	7.4e-54	45.6
WP_004510948.1\|2016991_2017516_-	6-carboxytetrahydropterin synthase	D5GVR0	Campylobacter_virus	1.2e-42	52.2
WP_004510949.1\|2017512_2018199_-	7-cyano-7-deazaguanine synthase QueC	M1PKZ7	Cellulophaga_phage	3.2e-24	36.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage