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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP040501 Lactobacillus paragasseri JV-V03 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP040500 Lactobacillus paragasseri JV-V03 chromosome, complete genome 2 crisprs cas3,DEDDh,DinG,WYL,csn2,cas2,cas1,cas9,csa3 1 8 2 0
NZ_CP040502 Lactobacillus paragasseri JV-V03 plasmid unnamed2, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP040500
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040500_1 1159404-1160693 TypeII NA
19 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040500_2 1252341-1252442 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP040500_2 2.1|1252377|30|NZ_CP040500|CRISPRCasFinder 1252377-1252406 30 NZ_CP040500.1 1858237-1858266 0 1.0

1. spacer 2.1|1252377|30|NZ_CP040500|CRISPRCasFinder matches to position: 1858237-1858266, mismatch: 0, identity: 1.0

tagcggcaattgtttctggtatggttggaa	CRISPR spacer
tagcggcaattgtttctggtatggttggaa	Protospacer
******************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 MN830257 Lactobacillus phage JNU_P11, complete genome 15531-15560 0 1.0
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NC_024206 Lactobacillus phage phi jlb1, complete genome 6493-6522 0 1.0
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 DQ320509 Lactobacillus phage KC5a, complete genome 6354-6383 0 1.0
NZ_CP040500_1 1.16|1160430|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160430-1160459 30 MN830256 Lactobacillus phage JNU_P7, complete genome 10030-10059 0 1.0
NZ_CP040500_1 1.19|1160628|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160628-1160657 30 NZ_CP008840 Lactobacillus gasseri DSM 14869 plasmid pEB01-2, complete sequence 3475-3504 0 1.0
NZ_CP040500_1 1.19|1160628|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160628-1160657 30 NZ_CP011405 Lactobacillus salivarius str. Ren plasmid pR2, complete sequence 7395-7424 1 0.967
NZ_CP040500_1 1.19|1160628|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160628-1160657 30 NC_006530 Lactobacillus salivarius UCC118 plasmid pSF118-44, complete sequence 15081-15110 1 0.967
NZ_CP040500_1 1.19|1160628|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160628-1160657 30 NC_011352 Lactobacillus paracasei plasmid plca36, complete sequence 28461-28490 1 0.967
NZ_CP040500_1 1.19|1160628|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160628-1160657 30 CP002035 Lactobacillus salivarius CECT 5713 plasmid pHN1, complete sequence 15396-15425 1 0.967
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 NC_018878 Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence 453154-453183 5 0.833
NZ_CP040500_1 1.5|1159704|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159704-1159733 30 MW117965 Synechococcus phage S-H38, complete genome 31696-31725 5 0.833
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 MN693441 Marine virus AFVG_25M481, complete genome 6968-6997 6 0.8
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 NC_018983 Borrelia burgdorferi 297 plasmid 297_cp26, complete sequence 8220-8249 6 0.8
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 NC_017401 Borreliella burgdorferi N40 plasmid N40_cp26, complete sequence 8220-8249 6 0.8
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 NC_017395 Borreliella burgdorferi JD1 plasmid JD1 cp26, complete sequence 8225-8254 6 0.8
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 NZ_CP031398 Borreliella burgdorferi strain MM1 plasmid plsm_cp26, complete sequence 8179-8208 6 0.8
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 NC_011724 Borreliella burgdorferi ZS7 plasmid ZS7_cp26, complete sequence 8223-8252 6 0.8
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 NC_001903 Borreliella burgdorferi B31 plasmid cp26, complete sequence 8222-8251 6 0.8
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 NZ_CP019755 Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp26, complete sequence 8222-8251 6 0.8
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 NZ_CP017202 Borreliella burgdorferi strain B331 plasmid B331_cp26, complete sequence 8222-8251 6 0.8
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 NC_019225 Borrelia burgdorferi plasmid cp26, complete sequence 8222-8251 6 0.8
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 NZ_LR214939 Mycoplasma salivarium strain NCTC10113 plasmid 2 195269-195298 7 0.767
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 MK448700 Streptococcus phage Javan191, complete genome 41970-41999 7 0.767
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 AP014363 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C2, *** SEQUENCING IN PROGRESS *** 4165-4194 7 0.767
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 MN694760 Marine virus AFVG_250M661, complete genome 25340-25369 7 0.767
NZ_CP040500_1 1.5|1159704|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159704-1159733 30 AY939844 Prochlorococcus phage P-SSM2, complete genome 3768-3797 7 0.767
NZ_CP040500_1 1.5|1159704|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159704-1159733 30 HQ632825 Prochlorococcus phage P-SSM5 genomic sequence 83185-83214 7 0.767
NZ_CP040500_1 1.5|1159704|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159704-1159733 30 MH319733 Marine virus AG-345-E02 Ga0172268_13 genomic sequence 8858-8887 7 0.767
NZ_CP040500_2 2.1|1252377|30|NZ_CP040500|CRISPRCasFinder 1252377-1252406 30 JQ768459 Pseudomonas phage Lu11, complete genome 278143-278172 7 0.767
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 MK493321 Cyanophage S-RIM4 isolate RW_11_0999, complete genome 129964-129993 8 0.733
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 NC_047882 Vibrio phage JSF12, complete genome 35270-35299 8 0.733
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 MH107246 Synechococcus phage S-B64, complete genome 72909-72938 8 0.733
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 MT002874 Pseudoalteromonas phage XC, complete genome 11365-11394 8 0.733
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 KY883654 Vibrio phage JSF10, complete genome 110240-110269 8 0.733
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 KY945241 Synechococcus phage S-H35, complete genome 102206-102235 8 0.733
NZ_CP040500_1 1.11|1160100|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160100-1160129 30 NZ_CP023509 Rothia mucilaginosa strain FDAARGOS_369 plasmid unnamed, complete sequence 23239-23268 8 0.733
NZ_CP040500_1 1.16|1160430|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160430-1160459 30 NZ_CP036405 Komagataeibacter saccharivorans strain JH1 plasmid p221732, complete sequence 28424-28453 8 0.733
NZ_CP040500_1 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT 1159440-1159469 30 KY945241 Synechococcus phage S-H35, complete genome 9419-9448 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_CP040051 Acinetobacter baumannii strain VB16141 plasmid unnamed1, complete sequence 3418-3447 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 MK531540 Acinetobacter baumannii strain MC75 plasmid pMC75.1, complete sequence 119769-119798 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_CP012007 Acinetobacter baumannii strain Ab04-mff plasmid pAB04-1, complete sequence 162566-162595 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 MK531536 Acinetobacter baumannii strain MC1 plasmid pMC1.1, complete sequence 153985-154014 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 CP040054 Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence 225877-225906 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_CP050386 Acinetobacter baumannii strain VB82 plasmid pVB82_1, complete sequence 22925-22954 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_CP020596 Acinetobacter baumannii strain HWBA8 plasmid pHWBA8_1, complete sequence 63593-63622 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_CP012005 Acinetobacter baumannii strain ATCC 17978-mff plasmid pAB3, complete sequence 142498-142527 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 MF399199 Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence 31257-31286 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_AP014650 Acinetobacter baumannii strain IOMTU433 plasmid pIOMTU433, complete sequence 155675-155704 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_CP027531 Acinetobacter baumannii strain AR_0088 plasmid unnamed1, complete sequence 137970-137999 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_CP050416 Acinetobacter baumannii strain PM193665 plasmid pPM193665_1, complete sequence 105068-105097 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_CP050426 Acinetobacter baumannii strain PM194188 plasmid pPM194122_1, complete sequence 105068-105097 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_CP050433 Acinetobacter baumannii strain PM194229 plasmid pPM194229_1, complete sequence 181077-181106 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 LT605060 Acinetobacter calcoaceticus strain NCTC7364 genome assembly, plasmid: 2 103919-103948 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_KU744946 Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence 31257-31286 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_CP040260 Acinetobacter baumannii strain P7774 plasmid unnamed1, complete sequence 27927-27956 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_KT779035 Acinetobacter baumannii strain D4 plasmid pD4, complete sequence 33753-33782 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_CP022285 Acinetobacter baumannii strain 7804 plasmid pAba7804b, complete sequence 34639-34668 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 NZ_MK323043 Acinetobacter baumannii strain Acb-45063 plasmid pAb45063_b, complete sequence 66180-66209 9 0.7
NZ_CP040500_1 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1159506-1159535 30 CP033562 Acinetobacter nosocomialis strain 2010S01-197 plasmid p2010S01-197-1, complete sequence 122795-122824 9 0.7
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 MK605244 Nodularia phage vB_NspS-kac65v162, complete genome 34049-34078 9 0.7
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 KU230356 Bacteriophage vB_NpeS-2AV2, complete genome 33808-33837 9 0.7
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 MK605242 Nodularia phage vB_NspS-kac65v151, complete genome 33596-33625 9 0.7
NZ_CP040500_1 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR 1160496-1160525 30 MK605243 Nodularia phage vB_NspS-kac65v161, complete genome 33617-33646 9 0.7

1. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to MN830257 (Lactobacillus phage JNU_P11, complete genome) position: , mismatch: 0, identity: 1.0

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
agcccttcgaactggcttatttctaaaatt	Protospacer
******************************

2. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NC_024206 (Lactobacillus phage phi jlb1, complete genome) position: , mismatch: 0, identity: 1.0

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
agcccttcgaactggcttatttctaaaatt	Protospacer
******************************

3. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to DQ320509 (Lactobacillus phage KC5a, complete genome) position: , mismatch: 0, identity: 1.0

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
agcccttcgaactggcttatttctaaaatt	Protospacer
******************************

4. spacer 1.16|1160430|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to MN830256 (Lactobacillus phage JNU_P7, complete genome) position: , mismatch: 0, identity: 1.0

aagcagtctttatggctaatccgtttatgg	CRISPR spacer
aagcagtctttatggctaatccgtttatgg	Protospacer
******************************

5. spacer 1.19|1160628|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008840 (Lactobacillus gasseri DSM 14869 plasmid pEB01-2, complete sequence) position: , mismatch: 0, identity: 1.0

ttacctgaatagtaacatttcgaagcatta	CRISPR spacer
ttacctgaatagtaacatttcgaagcatta	Protospacer
******************************

6. spacer 1.19|1160628|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011405 (Lactobacillus salivarius str. Ren plasmid pR2, complete sequence) position: , mismatch: 1, identity: 0.967

ttacctgaatagtaacatttcgaagcatta	CRISPR spacer
ttacctgaatagtaacattttgaagcatta	Protospacer
********************.*********

7. spacer 1.19|1160628|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NC_006530 (Lactobacillus salivarius UCC118 plasmid pSF118-44, complete sequence) position: , mismatch: 1, identity: 0.967

ttacctgaatagtaacatttcgaagcatta	CRISPR spacer
ttacctgaatagtaacattttgaagcatta	Protospacer
********************.*********

8. spacer 1.19|1160628|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NC_011352 (Lactobacillus paracasei plasmid plca36, complete sequence) position: , mismatch: 1, identity: 0.967

ttacctgaatagtaacatttcgaagcatta	CRISPR spacer
ttacctgaatagtaacattttgaagcatta	Protospacer
********************.*********

9. spacer 1.19|1160628|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to CP002035 (Lactobacillus salivarius CECT 5713 plasmid pHN1, complete sequence) position: , mismatch: 1, identity: 0.967

ttacctgaatagtaacatttcgaagcatta	CRISPR spacer
ttacctgaatagtaacattttgaagcatta	Protospacer
********************.*********

10. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 5, identity: 0.833

--agattcagcaactgattttttcttttcttc	CRISPR spacer
cttgatt--gcaaatgattttttcttttcatc	Protospacer
   ****  **** *************** **

11. spacer 1.5|1159704|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to MW117965 (Synechococcus phage S-H38, complete genome) position: , mismatch: 5, identity: 0.833

agatgttaatacacaaggttttaaatatgt-	CRISPR spacer
agatgttaatacacatgg-tttgaatttata	Protospacer
*************** ** ***.*** *.* 

12. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to MN693441 (Marine virus AFVG_25M481, complete genome) position: , mismatch: 6, identity: 0.8

agattcagcaactgattttttcttttcttc	CRISPR spacer
ccatctagcaattgattgtttcttttcttc	Protospacer
  **..*****.***** ************

13. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NC_018983 (Borrelia burgdorferi 297 plasmid 297_cp26, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgattcttctcgtattttaattttctat	CRISPR spacer
tgagattcttctattattttaatttttttt	Protospacer
.* *********  ************.* *

14. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NC_017401 (Borreliella burgdorferi N40 plasmid N40_cp26, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgattcttctcgtattttaattttctat	CRISPR spacer
tgagattcttctattattttaatttttttt	Protospacer
.* *********  ************.* *

15. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NC_017395 (Borreliella burgdorferi JD1 plasmid JD1 cp26, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgattcttctcgtattttaattttctat	CRISPR spacer
tgagattcttctattattttaatttttttt	Protospacer
.* *********  ************.* *

16. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031398 (Borreliella burgdorferi strain MM1 plasmid plsm_cp26, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgattcttctcgtattttaattttctat	CRISPR spacer
tgagattcttctattattttaatttttttt	Protospacer
.* *********  ************.* *

17. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NC_011724 (Borreliella burgdorferi ZS7 plasmid ZS7_cp26, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgattcttctcgtattttaattttctat	CRISPR spacer
tgagattcttctattattttaatttttttt	Protospacer
.* *********  ************.* *

18. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NC_001903 (Borreliella burgdorferi B31 plasmid cp26, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgattcttctcgtattttaattttctat	CRISPR spacer
tgagattcttctattattttaatttttttt	Protospacer
.* *********  ************.* *

19. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019755 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_cp26, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgattcttctcgtattttaattttctat	CRISPR spacer
tgagattcttctattattttaatttttttt	Protospacer
.* *********  ************.* *

20. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017202 (Borreliella burgdorferi strain B331 plasmid B331_cp26, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgattcttctcgtattttaattttctat	CRISPR spacer
tgagattcttctattattttaatttttttt	Protospacer
.* *********  ************.* *

21. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NC_019225 (Borrelia burgdorferi plasmid cp26, complete sequence) position: , mismatch: 6, identity: 0.8

cgtgattcttctcgtattttaattttctat	CRISPR spacer
tgagattcttctattattttaatttttttt	Protospacer
.* *********  ************.* *

22. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 7, identity: 0.767

agattcagcaactgattttttcttttcttc	CRISPR spacer
agattcagcaactgattttttaccatcaag	Protospacer
********************* .. **   

23. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to MK448700 (Streptococcus phage Javan191, complete genome) position: , mismatch: 7, identity: 0.767

agattcagcaactgattttttcttttcttc	CRISPR spacer
aaattcatcaattgattttttctttctgta	Protospacer
*.***** ***.*************.. * 

24. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to AP014363 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S41-C2, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

agattcagcaactgattttttcttttcttc	CRISPR spacer
atcgactgcaactggttttttattttcttc	Protospacer
*    * *******.****** ********

25. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to MN694760 (Marine virus AFVG_250M661, complete genome) position: , mismatch: 7, identity: 0.767

agattcagcaactgattttttcttttcttc	CRISPR spacer
agtagcagctactgattttttctttcctgt	Protospacer
**   **** ***************.** .

26. spacer 1.5|1159704|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to AY939844 (Prochlorococcus phage P-SSM2, complete genome) position: , mismatch: 7, identity: 0.767

agatgttaatacacaaggttttaaatatgt	CRISPR spacer
tgatgttaatgcacaaggtttaaatgaatt	Protospacer
 *********.********** **  *  *

27. spacer 1.5|1159704|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to HQ632825 (Prochlorococcus phage P-SSM5 genomic sequence) position: , mismatch: 7, identity: 0.767

agatgttaatacacaaggttttaaatatgt	CRISPR spacer
tgatgttaatgcacaaggtttaaatgaatt	Protospacer
 *********.********** **  *  *

28. spacer 1.5|1159704|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to MH319733 (Marine virus AG-345-E02 Ga0172268_13 genomic sequence) position: , mismatch: 7, identity: 0.767

agatgttaatacacaaggttttaaatatgt	CRISPR spacer
tgatgttaatgcacaaggtttaaatgaatt	Protospacer
 *********.********** **  *  *

29. spacer 2.1|1252377|30|NZ_CP040500|CRISPRCasFinder matches to JQ768459 (Pseudomonas phage Lu11, complete genome) position: , mismatch: 7, identity: 0.767

tagcggcaattgtttctggtatggttggaa	CRISPR spacer
aaacggcaattatttctggtatggtggagc	Protospacer
 *.********.************* *.. 

30. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to MK493321 (Cyanophage S-RIM4 isolate RW_11_0999, complete genome) position: , mismatch: 8, identity: 0.733

agattcagcaactgattttttcttttcttc	CRISPR spacer
tgattcagcaacttgttttttcttaccgat	Protospacer
 ************ .********* .*  .

31. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to NC_047882 (Vibrio phage JSF12, complete genome) position: , mismatch: 8, identity: 0.733

agattcagcaactgattttttcttttcttc	CRISPR spacer
gtttgttgctactgattttttcatttcttc	Protospacer
.  * . ** ************ *******

32. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to MH107246 (Synechococcus phage S-B64, complete genome) position: , mismatch: 8, identity: 0.733

agattcagcaactgattttttcttttcttc	CRISPR spacer
tgattcagcaacttgttttttcttaccgat	Protospacer
 ************ .********* .*  .

33. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to MT002874 (Pseudoalteromonas phage XC, complete genome) position: , mismatch: 8, identity: 0.733

agattcagcaactgattttttcttttcttc	CRISPR spacer
atcgcaagcaactgattctttattttcttt	Protospacer
*   . ***********.*** *******.

34. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to KY883654 (Vibrio phage JSF10, complete genome) position: , mismatch: 8, identity: 0.733

agattcagcaactgattttttcttttcttc	CRISPR spacer
gtttgttgctactgattttttcatttcttc	Protospacer
.  * . ** ************ *******

35. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to KY945241 (Synechococcus phage S-H35, complete genome) position: , mismatch: 8, identity: 0.733

agattcagcaactgattttttcttttcttc	CRISPR spacer
tgattcagcaacttgttttttcttaccgat	Protospacer
 ************ .********* .*  .

36. spacer 1.11|1160100|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023509 (Rothia mucilaginosa strain FDAARGOS_369 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

-ttagcacgggtagcctcagtatcaattttc	CRISPR spacer
actggtg-aggtggcctcagtatcaatttta	Protospacer
 .*.*.. .***.***************** 

37. spacer 1.16|1160430|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP036405 (Komagataeibacter saccharivorans strain JH1 plasmid p221732, complete sequence) position: , mismatch: 8, identity: 0.733

aagcagtctttatggctaatccgtttatgg	CRISPR spacer
gagcagtttttatggcaaatccgtcctcgt	Protospacer
.******.******** *******.. .* 

38. spacer 1.1|1159440|30|NZ_CP040500|CRISPRCasFinder,CRT matches to KY945241 (Synechococcus phage S-H35, complete genome) position: , mismatch: 9, identity: 0.7

agattcagcaactgattttttcttttcttc	CRISPR spacer
catgacagcaactgattttttcgttttcac	Protospacer
 .   ***************** ***.. *

39. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040051 (Acinetobacter baumannii strain VB16141 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

40. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to MK531540 (Acinetobacter baumannii strain MC75 plasmid pMC75.1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

41. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012007 (Acinetobacter baumannii strain Ab04-mff plasmid pAB04-1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

42. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to MK531536 (Acinetobacter baumannii strain MC1 plasmid pMC1.1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

43. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to CP040054 (Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

44. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050386 (Acinetobacter baumannii strain VB82 plasmid pVB82_1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

45. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020596 (Acinetobacter baumannii strain HWBA8 plasmid pHWBA8_1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

46. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012005 (Acinetobacter baumannii strain ATCC 17978-mff plasmid pAB3, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

47. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to MF399199 (Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

48. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014650 (Acinetobacter baumannii strain IOMTU433 plasmid pIOMTU433, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

49. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027531 (Acinetobacter baumannii strain AR_0088 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

50. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050416 (Acinetobacter baumannii strain PM193665 plasmid pPM193665_1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

51. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050426 (Acinetobacter baumannii strain PM194188 plasmid pPM194122_1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

52. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050433 (Acinetobacter baumannii strain PM194229 plasmid pPM194229_1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

53. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to LT605060 (Acinetobacter calcoaceticus strain NCTC7364 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

54. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KU744946 (Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

55. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040260 (Acinetobacter baumannii strain P7774 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

56. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KT779035 (Acinetobacter baumannii strain D4 plasmid pD4, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

57. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022285 (Acinetobacter baumannii strain 7804 plasmid pAba7804b, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

58. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK323043 (Acinetobacter baumannii strain Acb-45063 plasmid pAb45063_b, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

59. spacer 1.2|1159506|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to CP033562 (Acinetobacter nosocomialis strain 2010S01-197 plasmid p2010S01-197-1, complete sequence) position: , mismatch: 9, identity: 0.7

agcccttcgaactggcttatttctaaaatt	CRISPR spacer
catttttcgaaccggcttatttccaaaaag	Protospacer
 ....*******.**********.****  

60. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to MK605244 (Nodularia phage vB_NspS-kac65v162, complete genome) position: , mismatch: 9, identity: 0.7

cgtgattcttctcgtattttaattttctat	CRISPR spacer
ttaagttcttctagtattttaagtttcttg	Protospacer
.  ..******* ********* *****  

61. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to KU230356 (Bacteriophage vB_NpeS-2AV2, complete genome) position: , mismatch: 9, identity: 0.7

cgtgattcttctcgtattttaattttctat	CRISPR spacer
ttaagttcttctagtattttaagtttcttg	Protospacer
.  ..******* ********* *****  

62. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to MK605242 (Nodularia phage vB_NspS-kac65v151, complete genome) position: , mismatch: 9, identity: 0.7

cgtgattcttctcgtattttaattttctat	CRISPR spacer
ttaagttcttctagtattttaagtttcttg	Protospacer
.  ..******* ********* *****  

63. spacer 1.17|1160496|30|NZ_CP040500|CRISPRCasFinder,CRT,PILER-CR matches to MK605243 (Nodularia phage vB_NspS-kac65v161, complete genome) position: , mismatch: 9, identity: 0.7

cgtgattcttctcgtattttaattttctat	CRISPR spacer
ttaagttcttctagtattttaagtttcttg	Protospacer
.  ..******* ********* *****  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 605225 : 699073 109 Lactobacillus_phage(62.07%) terminase,plate,integrase,transposase,tail,holin,portal,protease,bacteriocin attL 659376:659435|attR 697037:697126
DBSCAN-SWA_2 1298077 : 1334700 47 Lactobacillus_phage(50.0%) terminase,integrase,tail,head,holin,portal attL 1297857:1297875|attR 1334785:1334803
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage