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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP040619 Staphylococcus aureus strain J01 chromosome, complete genome 10 crisprs cas3,DEDDh,DinG,csa3,WYL 6 0 8 1
NZ_CP040621 Staphylococcus aureus strain J01 plasmid pJ01-02, complete sequence 0 crisprs WYL,csa3 0 0 1 0
NZ_CP040620 Staphylococcus aureus strain J01 plasmid pJ01-01, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP040619
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040619_1 413154-413254 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040619_2 656214-656306 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040619_3 772362-772444 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040619_4 862315-862396 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040619_5 1044774-1044861 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040619_6 1129287-1129372 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040619_7 1828543-1828752 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040619_8 1951682-1951809 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040619_9 2263282-2263371 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040619_10 2387393-2387473 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP040619_4 4.1|862339|34|NZ_CP040619|CRISPRCasFinder 862339-862372 34 NZ_CP040619.1 1337451-1337484 0 1.0
NZ_CP040619_4 4.1|862339|34|NZ_CP040619|CRISPRCasFinder 862339-862372 34 NZ_CP040619.1 1426637-1426670 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 813284-813301 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 813339-813356 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 819000-819017 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 819058-819075 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 862395-862412 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 930784-930801 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 1054759-1054776 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 1426752-1426769 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 1649922-1649939 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 2029664-2029681 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 2827515-2827532 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 146778-146795 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 293260-293277 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 374623-374640 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 374678-374695 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 1337352-1337369 0 1.0
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 1828466-1828483 0 1.0
NZ_CP040619_6 6.1|1129317|26|NZ_CP040619|CRISPRCasFinder 1129317-1129342 26 NZ_CP040619.1 818727-818752 1 0.962
NZ_CP040619_6 6.1|1129317|26|NZ_CP040619|CRISPRCasFinder 1129317-1129342 26 NZ_CP040619.1 818783-818808 1 0.962
NZ_CP040619_6 6.1|1129317|26|NZ_CP040619|CRISPRCasFinder 1129317-1129342 26 NZ_CP040619.1 818839-818864 1 0.962
NZ_CP040619_6 6.1|1129317|26|NZ_CP040619|CRISPRCasFinder 1129317-1129342 26 NZ_CP040619.1 2827357-2827382 1 0.962
NZ_CP040619_6 6.1|1129317|26|NZ_CP040619|CRISPRCasFinder 1129317-1129342 26 NZ_CP040619.1 2827413-2827438 1 0.962
NZ_CP040619_6 6.1|1129317|26|NZ_CP040619|CRISPRCasFinder 1129317-1129342 26 NZ_CP040619.1 2827469-2827494 1 0.962
NZ_CP040619_7 7.1|1828580|22|NZ_CP040619|CRT 1828580-1828601 22 NZ_CP040619.1 1828521-1828542 1 0.955
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 826444-826461 1 0.944
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 1341774-1341791 1 0.944
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 1386680-1386697 1 0.944
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 1683888-1683905 1 0.944
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 2039013-2039030 1 0.944
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 2387375-2387392 1 0.944
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 293315-293332 1 0.944
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 1129222-1129239 1 0.944
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 2578822-2578839 1 0.944
NZ_CP040619_7 7.3|1828694|22|NZ_CP040619|CRT 1828694-1828715 22 NZ_CP040619.1 1828521-1828542 1 0.955
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 1758819-1758836 2 0.889
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 327269-327286 2 0.889
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 786264-786281 2 0.889
NZ_CP040619_7 7.2|1828639|18|NZ_CP040619|CRT 1828639-1828656 18 NZ_CP040619.1 1866540-1866557 2 0.889
NZ_CP040619_10 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder 2387418-2387448 31 NZ_CP040619.1 818705-818735 2 0.935
NZ_CP040619_10 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder 2387418-2387448 31 NZ_CP040619.1 818761-818791 2 0.935
NZ_CP040619_10 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder 2387418-2387448 31 NZ_CP040619.1 818817-818847 2 0.935
NZ_CP040619_10 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder 2387418-2387448 31 NZ_CP040619.1 818873-818903 2 0.935
NZ_CP040619_10 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder 2387418-2387448 31 NZ_CP040619.1 1028492-1028522 2 0.935
NZ_CP040619_10 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder 2387418-2387448 31 NZ_CP040619.1 2028253-2028283 2 0.935
NZ_CP040619_10 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder 2387418-2387448 31 NZ_CP040619.1 2664266-2664296 2 0.935
NZ_CP040619_10 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder 2387418-2387448 31 NZ_CP040619.1 2827447-2827477 2 0.935
NZ_CP040619_10 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder 2387418-2387448 31 NZ_CP040619.1 374509-374539 2 0.935
NZ_CP040619_10 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder 2387418-2387448 31 NZ_CP040619.1 1129278-1129308 2 0.935
NZ_CP040619_10 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder 2387418-2387448 31 NZ_CP040619.1 1337410-1337440 2 0.935

1. spacer 4.1|862339|34|NZ_CP040619|CRISPRCasFinder matches to position: 1337451-1337484, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

2. spacer 4.1|862339|34|NZ_CP040619|CRISPRCasFinder matches to position: 1426637-1426670, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

3. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 813284-813301, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

4. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 813339-813356, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

5. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 819000-819017, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

6. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 819058-819075, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

7. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 862395-862412, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

8. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 930784-930801, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

9. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 1054759-1054776, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

10. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 1426752-1426769, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

11. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 1649922-1649939, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

12. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 2029664-2029681, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

13. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 2827515-2827532, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

14. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 146778-146795, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

15. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 293260-293277, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

16. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 374623-374640, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

17. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 374678-374695, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

18. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 1337352-1337369, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

19. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 1828466-1828483, mismatch: 0, identity: 1.0

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaagaaatt	Protospacer
******************

20. spacer 6.1|1129317|26|NZ_CP040619|CRISPRCasFinder matches to position: 818727-818752, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctggcgg	Protospacer
*************.************

21. spacer 6.1|1129317|26|NZ_CP040619|CRISPRCasFinder matches to position: 818783-818808, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctggcgg	Protospacer
*************.************

22. spacer 6.1|1129317|26|NZ_CP040619|CRISPRCasFinder matches to position: 818839-818864, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctggcgg	Protospacer
*************.************

23. spacer 6.1|1129317|26|NZ_CP040619|CRISPRCasFinder matches to position: 2827357-2827382, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacaaagaagctggcgg	Protospacer
************* ************

24. spacer 6.1|1129317|26|NZ_CP040619|CRISPRCasFinder matches to position: 2827413-2827438, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacaaagaagctggcgg	Protospacer
************* ************

25. spacer 6.1|1129317|26|NZ_CP040619|CRISPRCasFinder matches to position: 2827469-2827494, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacaaagaagctggcgg	Protospacer
************* ************

26. spacer 7.1|1828580|22|NZ_CP040619|CRT matches to position: 1828521-1828542, mismatch: 1, identity: 0.955

agctggccaatagtcagctttc	CRISPR spacer
agctggccaatagttagctttc	Protospacer
**************.*******

27. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 826444-826461, mismatch: 1, identity: 0.944

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaatgaaatt	Protospacer
*********** ******

28. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 1341774-1341791, mismatch: 1, identity: 0.944

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgataagaaatt	Protospacer
********* ********

29. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 1386680-1386697, mismatch: 1, identity: 0.944

gaatttcgaaaagaaatt	CRISPR spacer
gattttcgaaaagaaatt	Protospacer
** ***************

30. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 1683888-1683905, mismatch: 1, identity: 0.944

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgtaaagaaatt	Protospacer
******** *********

31. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 2039013-2039030, mismatch: 1, identity: 0.944

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaaggaaatt	Protospacer
***********.******

32. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 2387375-2387392, mismatch: 1, identity: 0.944

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcaaaaagaaatt	Protospacer
*******.**********

33. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 293315-293332, mismatch: 1, identity: 0.944

gaatttcgaaaagaaatt	CRISPR spacer
gaaattcgaaaagaaatt	Protospacer
*** **************

34. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 1129222-1129239, mismatch: 1, identity: 0.944

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcaaaaagaaatt	Protospacer
*******.**********

35. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 2578822-2578839, mismatch: 1, identity: 0.944

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaaatgaaatt	Protospacer
*********** ******

36. spacer 7.3|1828694|22|NZ_CP040619|CRT matches to position: 1828521-1828542, mismatch: 1, identity: 0.955

agctggccaatagtcagctttc	CRISPR spacer
agctggccaatagttagctttc	Protospacer
**************.*******

37. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 1758819-1758836, mismatch: 2, identity: 0.889

gaatttcgaaaagaaatt	CRISPR spacer
gaagttcaaaaagaaatt	Protospacer
*** ***.**********

38. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 327269-327286, mismatch: 2, identity: 0.889

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcgaagaaaaatt	Protospacer
**********.*.*****

39. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 786264-786281, mismatch: 2, identity: 0.889

gaatttcgaaaagaaatt	CRISPR spacer
gaatttcaaaaaggaatt	Protospacer
*******.*****.****

40. spacer 7.2|1828639|18|NZ_CP040619|CRT matches to position: 1866540-1866557, mismatch: 2, identity: 0.889

gaatttcgaaaagaaatt	CRISPR spacer
gaagttcaaaaagaaatt	Protospacer
*** ***.**********

41. spacer 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder matches to position: 818705-818735, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

42. spacer 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder matches to position: 818761-818791, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

43. spacer 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder matches to position: 818817-818847, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

44. spacer 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder matches to position: 818873-818903, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

45. spacer 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder matches to position: 1028492-1028522, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

46. spacer 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder matches to position: 2028253-2028283, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

47. spacer 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder matches to position: 2664266-2664296, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

48. spacer 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder matches to position: 2827447-2827477, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

49. spacer 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder matches to position: 374509-374539, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

50. spacer 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder matches to position: 1129278-1129308, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

51. spacer 10.1|2387418|31|NZ_CP040619|CRISPRCasFinder matches to position: 1337410-1337440, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 750469 : 758289 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_2 770261 : 784878 16 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 1479653 : 1566406 106 Staphylococcus_phage(79.22%) portal,integrase,tRNA,terminase,holin,plate,capsid,tail,protease,head attL 1518626:1518643|attR 1564923:1564940
DBSCAN-SWA_4 1621530 : 1629842 7 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_5 1698980 : 1708023 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_6 1833639 : 1951472 115 Staphylococcus_phage(89.39%) protease,transposase,tRNA NA
DBSCAN-SWA_7 1976455 : 2018221 64 Staphylococcus_phage(59.38%) portal,integrase,terminase,holin,capsid,plate,tail,head attL 2008723:2008738|attR 2022920:2022935
DBSCAN-SWA_8 2053689 : 2141367 112 Staphylococcus_phage(92.31%) portal,integrase,terminase,holin,capsid,tail,head,protease attL 2102520:2102537|attR 2127451:2127468
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP040619.1|WP_000384171.1|1859952_1860177_-|hypothetical-protein 1859952_1860177_- 74 aa aa NA HTH_LUXR NA 1833639-1951472 yes
2. NZ_CP040621
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 8304 : 16013 9 Staphylococcus_phage(42.86%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage