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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP040700 Salmonella enterica subsp. enterica serovar Saintpaul strain 5 isolate CFSAN047351 chromosome, complete genome 4 crisprs PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG 0 19 8 0

Results visualization

1. NZ_CP040700
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040700_1 597725-597825 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040700_2 946679-948049 TypeI-E I-E
22 spacers
cas3,cas8e,cse2gr11,cas7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040700_3 964308-965130 TypeI-E I-E
13 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040700_4 1155774-1155883 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_002638 Salmonella enterica enterica sv Choleraesuis RF-1 plasmid pKDSC50, complete sequence 22033-22064 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_KY401053 Salmonella enterica subsp. enterica serovar Enteritidis strain SE380 plasmid unnamed, complete sequence 108454-108485 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_KX807610 Salmonella enterica subsp. enterica serovar Enteritidis strain CNM4839/03 plasmid pUO-SeVR1, complete sequence 96934-96965 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_KT317612 Salmonella enterica subsp. enterica serovar Enteritidis strain EC20120002 plasmid pSE12-2, complete sequence 5412-5443 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP018663 Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-2, complete sequence 18476-18507 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP033089 Salmonella enterica subsp. enterica serovar Enteritidis strain SEO plasmid unnamed, complete sequence 35045-35076 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP026054 Salmonella enterica strain FDAARGOS_70 plasmid unnamed2, complete sequence 34987-35018 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP023437 Salmonella enterica strain FORC_074 plasmid pFORC74_2, complete sequence 3595-3626 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP040645 Salmonella enterica subsp. enterica serovar Enteritidis strain SAP18-0432 plasmid pCFSAN074386, complete sequence 42980-43011 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP043774 Salmonella enterica strain QH plasmid p1, complete sequence 817-848 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP018639 Salmonella enterica subsp. enterica serovar Enteritidis strain 69-3861 plasmid pSE69-3861-2, complete sequence 38-69 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP025553 Salmonella enterica subsp. enterica serovar Enteritidis strain ATCC BAA-708 plasmid pPIR00558, complete sequence 24430-24461 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_010119 Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pOU7519, complete sequence 23910-23941 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP018653 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-2, complete sequence 10716-10747 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 HG970000 Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 PT4 plasmid pSEN complete sequence 10716-10747 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP026570 Salmonella enterica strain MFDS1004839 plasmid pSE1004839, complete sequence 36496-36527 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP017233 Salmonella enterica strain FORC_051 plasmid pFORC51, complete sequence 43771-43802 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP009767 Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_007 plasmid pFORC7, complete sequence 47455-47486 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 KT317611 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090641 plasmid pSE9-641, complete sequence 5413-5444 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 KT317613 Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120005 plasmid pSE12-5, complete sequence 5412-5443 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP012397 Salmonella enterica strain FORC_019 plasmid pFORC19, complete sequence 80622-80653 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP015525 Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF10978 plasmid pSJTUF10978, complete sequence 6973-7004 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_012124 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 plasmid pSPCV, complete sequence 20730-20761 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP022004 Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN051873 plasmid pCFSAN051873, complete sequence 42046-42077 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP007508 Salmonella enterica subsp. enterica serovar Enteritidis strain Durban plasmid, complete sequence 20955-20986 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP008927 Salmonella enterica subsp. enterica serovar Enteritidis strain SEJ plasmid unnamed, complete sequence 5412-5443 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP041178 Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367B, complete sequence 16624-16655 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP050708 Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-2, complete sequence 6254-6285 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP015527 Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF10984 plasmid pSJTUF10984, complete sequence 6973-7004 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP011395 Salmonella enterica subsp. enterica serovar Enteritidis str. 18569 plasmid pCFSAN000006, complete sequence 26460-26491 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP007529 Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0968 isolate CDC_2010K-0968 plasmid p00, complete sequence 4387-4418 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_006855 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 plasmid pSCV50, complete sequence 22046-22077 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP012345 Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 plasmid pCFSAN000679_01, complete sequence 20891-20922 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP041972 Salmonella enterica subsp. enterica serovar Enteritidis strain NCCP 16206 plasmid unnamed, complete sequence 42278-42309 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 MN125607 Salmonella enterica subsp. enterica serovar Enteritidis strain 1.1-2C7 plasmid p1.1-2C7, complete sequence 3900-3931 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 MN125608 Salmonella enterica subsp. enterica serovar Enteritidis strain 1.05-1C8 plasmid p1.05-1C8, complete sequence 4034-4065 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 MN125609 Salmonella enterica subsp. enterica serovar Enteritidis strain 1.15-2E5 plasmid p1.15-2E5, complete sequence 4034-4065 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP011943 Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 plasmid virulence, complete sequence 10716-10747 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 CP053399 Salmonella enterica subsp. enterica serovar Paratyphi C strain 07-0715 plasmid unnamed, complete sequence 43649-43680 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP020824 Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN033541 plasmid pCFSAN033541, complete sequence 608-639 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP020826 Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN033543 plasmid pCFSAN033543, complete sequence 53879-53910 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP013098 Salmonella enterica subsp. enterica serovar Enteritidis strain CMCC50041 plasmid pCMCC50041, complete sequence 22665-22696 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP032850 Salmonella enterica subsp. enterica serovar Enteritidis strain NCM 61 plasmid pM0061, complete sequence 14480-14511 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP050711 Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-2, complete sequence 6254-6285 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 LN879484 Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSEN-BT, strain D7795 26106-26137 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP018660 Salmonella enterica subsp. enterica serovar Enteritidis strain 93-0639 plasmid pSE93-0639, complete sequence 20605-20636 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP018641 Salmonella enterica subsp. enterica serovar Enteritidis strain 70-1605 plasmid pSE70-1605, complete sequence 10724-10755 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP050725 Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-2, complete sequence 6254-6285 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_019120 Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSENV, complete sequence 20954-20985 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP018636 Salmonella enterica subsp. enterica serovar Enteritidis strain 56-3991 plasmid pSE56-3991, complete sequence 5412-5443 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP018634 Salmonella enterica subsp. enterica serovar Enteritidis strain 49-2444 plasmid pSE49-2444, complete sequence 52191-52222 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP026714 Salmonella enterica strain FORC_078 plasmid pFORC_078_2, complete sequence 29217-29248 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP018650 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1607 plasmid pSE81-1607-2, complete sequence 5412-5443 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP030796 Salmonella enterica strain 2017K-0021 plasmid p2017K-0021, complete sequence 28676-28707 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP018656 Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence 77241-77272 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP050722 Salmonella enterica subsp. enterica serovar Enteritidis strain SE81 plasmid pSE81-1, complete sequence 6254-6285 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP050718 Salmonella enterica subsp. enterica serovar Enteritidis strain SE95 plasmid pSE95-2, complete sequence 6254-6285 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP040647 Salmonella enterica subsp. enterica serovar Enteritidis strain SAP18-H9654 plasmid pCFSAN074385, complete sequence 35257-35288 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP043434 Salmonella enterica subsp. enterica serovar Enteritidis strain PT1 plasmid pPT1-1, complete sequence 6254-6285 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP025557 Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p1PIR00532, complete sequence 37359-37390 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP017178 Salmonella enterica strain FORC_056 plasmid unnamed1, complete sequence 22769-22800 0 1.0
NZ_CP040700_3 3.13|965070|32|NZ_CP040700|CRISPRCasFinder,CRT 965070-965101 32 NZ_CP044185 Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403 35345-35376 0 1.0
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP017620 Salmonella enterica subsp. enterica serovar Typhimurium strain 22792 plasmid unnamed1, complete sequence 17360-17391 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP046282 Salmonella enterica strain FDAARGOS_687 plasmid unnamed1, complete sequence 5282-5313 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP017618 Salmonella enterica subsp. enterica serovar Typhimurium strain 22495 plasmid unnamed1, complete sequence 9686-9717 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP035302 Salmonella enterica subsp. enterica strain ST1539 plasmid pST1539, complete sequence 17072-17103 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP040569 Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-8290 plasmid pCFSAN059542, complete sequence 77289-77320 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP014980 Salmonella enterica subsp. enterica serovar Typhimurium str. CDC H2662 plasmid pSTY1-H2662, complete sequence 10996-11027 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP014970 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1808 isolate ST1126-1 plasmid pSTY1-1808, complete sequence 11000-11031 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP014968 Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2011K-1702 plasmid pSTY1-2011K-1702, complete sequence 10996-11027 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP037873 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS014854 plasmid pPNCS014854_S1, complete sequence 5372-5403 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP037876 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S3, complete sequence 84038-84069 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP020923 Salmonella enterica subsp. enterica strain 16A242 plasmid unnamed1, complete sequence 102825-102856 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP014973 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY2-1898, complete sequence 10996-11027 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 CP038435 Salmonella enterica subsp. enterica serovar Typhimurium strain E40V plasmid unnamed, complete sequence 5372-5403 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP014976 Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2009K-1640 plasmid pSTY1-2009K-1640, complete sequence 10996-11027 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_017054 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 plasmid p798_93, complete sequence 10895-10926 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP047324 Salmonella enterica subsp. enterica serovar Typhimurium strain RM13672 plasmid pRM13672, complete sequence 10995-11026 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP014537 Salmonella enterica subsp. enterica serovar Typhimurium strain SO3 isolate SOHS 02-68 plasmid pSO3_STV, complete sequence 10995-11026 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_022570 Salmonella enterica subsp. enterica serovar Typhimurium str. DT104 unnamed plasmid, complete sequence 10995-11026 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP039560 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.2, complete sequence 40955-40986 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP039577 Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014856 plasmid p10-3857.1, complete sequence 2315-2346 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP039586 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014859 plasmid p11-0225.1, complete sequence 41014-41045 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_LN999012 Salmonella enterica subsp. enterica serovar Typhimurium str. DT2 plasmid pSLT, complete sequence 10996-11027 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP034480 Salmonella enterica subsp. enterica serovar Typhimurium strain 14028 plasmid unnamed, complete sequence 6587-6618 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 CP038433 Salmonella enterica subsp. enterica serovar Typhimurium strain E40 plasmid unnamed, complete sequence 5372-5403 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP016390 Salmonella enterica subsp. enterica serovar Typhimurium strain 13-931 plasmid pSLT931, complete sequence 10995-11026 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP025556 Salmonella enterica subsp. enterica serovar Typhimurium strain PIR00538 plasmid pPIR00538, complete sequence 52215-52246 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP050746 Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-1, complete sequence 6587-6618 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP053871 Salmonella enterica subsp. enterica serovar Typhimurium strain SS2017 plasmid pSS2017-1, complete sequence 84153-84184 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP053866 Salmonella enterica subsp. enterica serovar Typhimurium strain SL7207 plasmid pSL7202-1, complete sequence 82815-82846 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP041006 Salmonella enterica strain FDAARGOS_768 plasmid unnamed1, complete sequence 1991-2022 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP039855 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014864 plasmid p11-0972.1, complete sequence 41027-41058 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP034231 Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 plasmid pATCC14028, complete sequence 56001-56032 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP029594 Salmonella enterica strain DA34827 plasmid pDA34827-94, complete sequence 64762-64793 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 CP051287 Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Gull_ST-29 plasmid pST29-94038, complete sequence 94186-94217 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP017729 Salmonella enterica subsp. enterica serovar Typhimurium str. SARA13 plasmid pSARA13, complete sequence 90052-90083 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP008745 Salmonella enterica subsp. enterica serovar Typhimurium strain VNP20009 plasmid pSLT_VNP20009, complete sequence 10995-11026 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP007582 Salmonella enterica subsp. enterica serovar Typhimurium strain 138736 plasmid, complete sequence 10996-11027 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP039566 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014849 plasmid p08-7727.1, complete sequence 40955-40986 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_013437 Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSLT-BT, complete sequence 8039-8070 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP034720 Salmonella enterica subsp. enterica serovar Typhimurium strain RSE04 plasmid pRSE04, complete sequence 6587-6618 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 CP051281 Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Junco_ST-35 plasmid pST35-99574.1A, complete sequence 17652-17683 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP029596 Salmonella enterica strain DA34833 plasmid pDA34833-94, complete sequence 91595-91626 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 CP051277 Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Sparrow_ST-87 plasmid pST87-92921, complete sequence 24086-24117 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_LS997974 Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pSLT-BT 6587-6618 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 LN794247 Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSBLT, complete sequence 21607-21638 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP041974 Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP 16207 plasmid unnamed1, complete sequence 69020-69051 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP039580 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014857 plasmid p10-3881.1, complete sequence 26467-26498 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP039583 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014858 plasmid p10-8609.1, complete sequence 41062-41093 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP044969 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS007087.2, complete sequence 39341-39372 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP044959 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.2, complete sequence 6587-6618 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP039596 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014865 plasmid p12-4331.1, complete sequence 40955-40986 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP039592 Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014862 plasmid p11-0500.1, complete sequence 41072-41103 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP039568 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014850 plasmid p08-8136.1, complete sequence 40955-40986 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 CP014577 Salmonella enterica subsp. enterica serovar Typhimurium strain RM9437 plasmid pRM9437, complete sequence 10995-11026 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 CP013721 Salmonella enterica subsp. enterica serovar Typhimurium strain RM10607 plasmid pRM10607, complete sequence 10995-11026 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_016864 Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 plasmid pSTUK-100, complete sequence 86638-86669 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP014962 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1899 plasmid pSTY1-1899, complete sequence 10996-11027 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_016861 Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 plasmid pSTMDT12_L, complete sequence 10995-11026 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP021464 Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_2, complete sequence 21634-21665 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP029838 Salmonella enterica subsp. enterica serovar Typhimurium strain 10ST07093 plasmid p10ST07093B, complete sequence 60842-60873 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP014050 Salmonella enterica strain FDAARGOS_94 plasmid unnamed, complete sequence 47407-47438 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP038848 Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014851 plasmid p09-0499.1, complete sequence 40955-40986 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP050736 Salmonella enterica subsp. enterica serovar Typhimurium strain ST90 plasmid pST90-2, complete sequence 6587-6618 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP040565 Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7699 plasmid pCFSAN059544, complete sequence 53755-53786 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_003277 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 plasmid pSLT, complete sequence 10996-11027 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP022071 Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed1, complete sequence 64647-64678 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP051268 Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Hawk_ST-33 plasmid pST33-93798, complete sequence 84480-84511 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP029841 Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence 6587-6618 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_016855 Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S plasmid unnamed, complete sequence 10995-11026 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_LT855377 Salmonella enterica subsp. enterica serovar Typhimurium isolate STMU2UK plasmid 2 10995-11026 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP027413 Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_320 plasmid unnamed2, complete sequence 2356-2387 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP027409 Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_317 plasmid unnamed, complete sequence 94266-94297 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP014359 Salmonella enterica subsp. enterica serovar Typhimurium strain YU15 plasmid pYU15_94, complete sequence 10995-11026 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP015158 Salmonella enterica subsp. enterica serovar Typhimurium strain NC983 plasmid unnamed, complete sequence 10994-11025 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP018658 Salmonella enterica subsp. enterica serovar Enteritidis strain 92-0392 plasmid pSE92-0392, complete sequence 15532-15563 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP028200 Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN018746 plasmid pGMI14-001, complete sequence 52532-52563 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NC_021155 Salmonella enterica subsp. enterica serovar Typhimurium str. U288 plasmid pSTU288-1, complete sequence 29455-29486 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP014357 Salmonella enterica subsp. enterica serovar Typhimurium strain SO2 isolate SOHS 02-20 plasmid pSO2_STV, complete sequence 10994-11025 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP028319 Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067216 plasmid pSC-09-1, complete sequence 17458-17489 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP050741 Salmonella enterica subsp. enterica serovar Typhimurium strain ST56 plasmid pST56-2, complete sequence 6587-6618 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP040901 Salmonella enterica subsp. enterica serovar Typhimurium strain SAP18-6199 plasmid pCFSAN074387, complete sequence 5394-5425 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP040322 Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014879 plasmid p16-6397.1, complete sequence 41063-41094 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP045950 Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00010529 plasmid pAUSMDU00010529_01, complete sequence 6599-6630 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP015599 Salmonella enterica strain FORC_030 plasmid pFORC_030, complete sequence 6048-6079 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP026701 Salmonella enterica subsp. enterica serovar Typhimurium strain AR_0031 plasmid unitig_1_pilon, complete sequence 64941-64972 1 0.969
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 KX777254 Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSTV-Mu1, complete sequence 9073-9104 1 0.969
NZ_CP040700_3 3.8|964765|32|NZ_CP040700|CRISPRCasFinder,CRT 964765-964796 32 NC_004313 Salmonella phage ST64B, complete genome 31961-31992 1 0.969
NZ_CP040700_3 3.8|964765|32|NZ_CP040700|CRISPRCasFinder,CRT 964765-964796 32 KU927493 Salmonella phage 118970_sal3, complete genome 69573-69604 1 0.969
NZ_CP040700_3 3.8|964765|32|NZ_CP040700|CRISPRCasFinder,CRT 964765-964796 32 AY055382 Salmonella typhimurium phage ST64B complete sequence 31961-31992 1 0.969
NZ_CP040700_3 3.13|965070|32|NZ_CP040700|CRISPRCasFinder,CRT 965070-965101 32 NZ_CP029990 Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence 95164-95195 1 0.969
NZ_CP040700_3 3.13|965070|32|NZ_CP040700|CRISPRCasFinder,CRT 965070-965101 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 9403-9434 1 0.969
NZ_CP040700_3 3.13|965070|32|NZ_CP040700|CRISPRCasFinder,CRT 965070-965101 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 39737-39768 1 0.969
NZ_CP040700_3 3.13|965070|32|NZ_CP040700|CRISPRCasFinder,CRT 965070-965101 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 113376-113407 1 0.969
NZ_CP040700_2 2.14|947501|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947501-947532 32 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 277890-277921 6 0.812
NZ_CP040700_2 2.17|947684|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947684-947715 32 NZ_CP006990 Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence 478474-478505 6 0.812
NZ_CP040700_2 2.17|947684|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947684-947715 32 NZ_CP013556 Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence 716796-716827 6 0.812
NZ_CP040700_2 2.17|947684|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947684-947715 32 NZ_CP020911 Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence 633092-633123 6 0.812
NZ_CP040700_2 2.17|947684|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947684-947715 32 NC_021911 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence 493788-493819 6 0.812
NZ_CP040700_2 2.17|947684|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947684-947715 32 NZ_CP013567 Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence 716796-716827 6 0.812
NZ_CP040700_2 2.17|947684|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947684-947715 32 NZ_CP021127 Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence 443317-443348 6 0.812
NZ_CP040700_2 2.16|947623|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947623-947654 32 KX657793 Mycobacterium phage DarthPhader, complete genome 27141-27172 7 0.781
NZ_CP040700_2 2.21|947928|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947928-947959 32 NZ_CP044217 Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence 213820-213851 7 0.781
NZ_CP040700_3 3.13|965070|32|NZ_CP040700|CRISPRCasFinder,CRT 965070-965101 32 NZ_CP040720 Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence 270963-270994 7 0.781
NZ_CP040700_2 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946708-946739 32 NZ_CP013525 Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence 216863-216894 8 0.75
NZ_CP040700_2 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946708-946739 32 NZ_CP013554 Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence 236953-236984 8 0.75
NZ_CP040700_2 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946708-946739 32 NZ_CP013588 Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence 212208-212239 8 0.75
NZ_CP040700_2 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946708-946739 32 NZ_CP013577 Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence 217056-217087 8 0.75
NZ_CP040700_2 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946708-946739 32 NZ_CP013549 Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence 217426-217457 8 0.75
NZ_CP040700_2 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946708-946739 32 NZ_CP013534 Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence 217426-217457 8 0.75
NZ_CP040700_2 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946708-946739 32 NZ_CP013545 Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence 217421-217452 8 0.75
NZ_CP040700_2 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946708-946739 32 NZ_CP013565 Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence 236953-236984 8 0.75
NZ_CP040700_2 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946708-946739 32 NZ_CP013571 Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence 217056-217087 8 0.75
NZ_CP040700_2 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946708-946739 32 NC_010998 Rhizobium etli CIAT 652 plasmid pA, complete sequence 223032-223063 8 0.75
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP015322 Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence 89892-89923 8 0.75
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP029211 Aquabacterium olei strain NBRC 110486 plasmid pTB101, complete sequence 62797-62828 8 0.75
NZ_CP040700_2 2.7|947074|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947074-947105 32 NC_023285 Streptomyces sp. F8 plasmid pFRL5, complete sequence 317653-317684 8 0.75
NZ_CP040700_2 2.15|947562|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947562-947593 32 MN693945 Marine virus AFVG_250M952, complete genome 30837-30868 8 0.75
NZ_CP040700_2 2.15|947562|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947562-947593 32 MT773554 Myoviridae sp. isolate BML_2 genomic sequence 32798-32829 8 0.75
NZ_CP040700_2 2.22|947989|32|NZ_CP040700|CRISPRCasFinder,CRT 947989-948020 32 JX434031 Pseudomonas phage JBD24, complete genome 2242-2273 8 0.75
NZ_CP040700_3 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT 964399-964430 32 NZ_CP043846 Staphylococcus epidermidis strain ATCC 12228 plasmid unnamed, complete sequence 8219-8250 8 0.75
NZ_CP040700_3 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT 964399-964430 32 NZ_CP030248 Staphylococcus epidermidis strain CSF41498 plasmid pCSF41498_2, complete sequence 7928-7959 8 0.75
NZ_CP040700_3 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT 964399-964430 32 NZ_CP009047 Staphylococcus epidermidis strain SEI plasmid unnamed, complete sequence 1747-1778 8 0.75
NZ_CP040700_3 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT 964399-964430 32 NZ_HG813244 Staphylococcus epidermidis PM221 plasmid 3, complete sequence 5322-5353 8 0.75
NZ_CP040700_3 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT 964399-964430 32 NZ_CP023971 Staphylococcus lugdunensis strain FDAARGOS_381 plasmid unnamed1, complete sequence 1686-1717 8 0.75
NZ_CP040700_3 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT 964399-964430 32 NZ_CP014116 Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed4 4418-4449 8 0.75
NZ_CP040700_3 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT 964399-964430 32 NZ_CP014117 Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed3, complete sequence 5393-5424 8 0.75
NZ_CP040700_3 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT 964399-964430 32 NZ_CP014120 Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed2, complete sequence 1517-1548 8 0.75
NZ_CP040700_3 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT 964399-964430 32 NZ_CP034116 Staphylococcus epidermidis strain CDC121 plasmid pSTA481, complete sequence 3901-3932 8 0.75
NZ_CP040700_3 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT 964399-964430 32 NZ_CP034113 Staphylococcus epidermidis strain CDC120 plasmid pSTA492, complete sequence 16472-16503 8 0.75
NZ_CP040700_3 3.5|964582|32|NZ_CP040700|CRISPRCasFinder,CRT 964582-964613 32 FQ857195 Erwinia phage phiEa116, WORKING DRAFT SEQUENCE, 6 unordered pieces 13850-13881 8 0.75
NZ_CP040700_3 3.5|964582|32|NZ_CP040700|CRISPRCasFinder,CRT 964582-964613 32 HQ728263 Erwinia phage vB_EamM-M7, complete genome 10942-10973 8 0.75
NZ_CP040700_3 3.6|964643|32|NZ_CP040700|CRISPRCasFinder,CRT 964643-964674 32 NZ_CP050100 Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence 272426-272457 8 0.75
NZ_CP040700_2 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 946830-946861 32 NZ_CP022317 Brachybacterium avium strain VR2415 plasmid unnamed1 29801-29832 9 0.719
NZ_CP040700_2 2.8|947135|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947135-947166 32 NZ_CP024907 Paraburkholderia caledonica strain PHRS4 plasmid pPHRS4, complete sequence 189483-189514 9 0.719
NZ_CP040700_2 2.9|947196|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947196-947227 32 MN855642 Bacteriophage sp. isolate 132, complete genome 10504-10535 9 0.719
NZ_CP040700_2 2.16|947623|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947623-947654 32 NC_012811 Methylorubrum extorquens AM1 megaplasmid, complete sequence 1179902-1179933 9 0.719
NZ_CP040700_3 3.3|964460|32|NZ_CP040700|CRISPRCasFinder,CRT 964460-964491 32 NZ_CP021438 Bacillus thuringiensis strain C15 plasmid pBMB172, complete sequence 72349-72380 9 0.719
NZ_CP040700_3 3.5|964582|32|NZ_CP040700|CRISPRCasFinder,CRT 964582-964613 32 NZ_CP009827 Xylella fastidiosa strain Pr8x plasmid pXF39, complete sequence 301-332 9 0.719
NZ_CP040700_3 3.5|964582|32|NZ_CP040700|CRISPRCasFinder,CRT 964582-964613 32 NZ_CP009825 Xylella fastidiosa strain J1a12 plasmid pXF51-J1, complete sequence 305-336 9 0.719
NZ_CP040700_3 3.5|964582|32|NZ_CP040700|CRISPRCasFinder,CRT 964582-964613 32 NC_002490 Xylella fastidiosa 9a5c plasmid pXF51, complete sequence 305-336 9 0.719
NZ_CP040700_3 3.5|964582|32|NZ_CP040700|CRISPRCasFinder,CRT 964582-964613 32 NZ_CP009791 Xylella fastidiosa strain U24d plasmid pXF51ud, complete sequence 305-336 9 0.719
NZ_CP040700_3 3.6|964643|32|NZ_CP040700|CRISPRCasFinder,CRT 964643-964674 32 NZ_CP034911 Ensifer alkalisoli strain YIC4027 plasmid unnamed, complete sequence 88392-88423 9 0.719
NZ_CP040700_3 3.8|964765|32|NZ_CP040700|CRISPRCasFinder,CRT 964765-964796 32 NZ_CP015221 Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence 111308-111339 9 0.719
NZ_CP040700_2 2.7|947074|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947074-947105 32 NC_008208 Aeromonas phage 25, complete genome 118581-118612 10 0.688
NZ_CP040700_2 2.7|947074|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947074-947105 32 DQ529280 Aeromonas salmonicida bacteriophage 25, complete genome 118581-118612 10 0.688
NZ_CP040700_2 2.13|947440|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947440-947471 32 MN694012 Marine virus AFVG_250M887, complete genome 22169-22200 10 0.688
NZ_CP040700_2 2.16|947623|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947623-947654 32 NZ_KU140623 Sinorhizobium sp. M14 plasmid pSinB, complete sequence 129526-129557 10 0.688
NZ_CP040700_2 2.18|947745|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT 947745-947776 32 NZ_CP019603 Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence 489441-489472 10 0.688
NZ_CP040700_3 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT 964399-964430 32 LR135896 uncultured phage genomic DNA containing rbcL region region 72577-72608 10 0.688
NZ_CP040700_3 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT 964399-964430 32 NC_049387 Escherichia virus P2_4B2 genome assembly, chromosome: 1 31143-31174 10 0.688

1. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_002638 (Salmonella enterica enterica sv Choleraesuis RF-1 plasmid pKDSC50, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

2. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY401053 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE380 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

3. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX807610 (Salmonella enterica subsp. enterica serovar Enteritidis strain CNM4839/03 plasmid pUO-SeVR1, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

4. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT317612 (Salmonella enterica subsp. enterica serovar Enteritidis strain EC20120002 plasmid pSE12-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

5. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018663 (Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

6. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033089 (Salmonella enterica subsp. enterica serovar Enteritidis strain SEO plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

7. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026054 (Salmonella enterica strain FDAARGOS_70 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

8. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023437 (Salmonella enterica strain FORC_074 plasmid pFORC74_2, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

9. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040645 (Salmonella enterica subsp. enterica serovar Enteritidis strain SAP18-0432 plasmid pCFSAN074386, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

10. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043774 (Salmonella enterica strain QH plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

11. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018639 (Salmonella enterica subsp. enterica serovar Enteritidis strain 69-3861 plasmid pSE69-3861-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

12. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025553 (Salmonella enterica subsp. enterica serovar Enteritidis strain ATCC BAA-708 plasmid pPIR00558, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

13. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_010119 (Salmonella enterica subsp. enterica serovar Choleraesuis plasmid pOU7519, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

14. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018653 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1705 plasmid pSE81-1705-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

15. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to HG970000 (Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 PT4 plasmid pSEN complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

16. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026570 (Salmonella enterica strain MFDS1004839 plasmid pSE1004839, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

17. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017233 (Salmonella enterica strain FORC_051 plasmid pFORC51, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

18. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009767 (Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_007 plasmid pFORC7, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

19. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to KT317611 (Salmonella enterica subsp. enterica serovar Enteritidis str. EC20090641 plasmid pSE9-641, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

20. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to KT317613 (Salmonella enterica subsp. enterica serovar Enteritidis str. EC20120005 plasmid pSE12-5, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

21. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012397 (Salmonella enterica strain FORC_019 plasmid pFORC19, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

22. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015525 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF10978 plasmid pSJTUF10978, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

23. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_012124 (Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 plasmid pSPCV, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

24. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022004 (Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN051873 plasmid pCFSAN051873, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

25. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007508 (Salmonella enterica subsp. enterica serovar Enteritidis strain Durban plasmid, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

26. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008927 (Salmonella enterica subsp. enterica serovar Enteritidis strain SEJ plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

27. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041178 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367B, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

28. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050708 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

29. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015527 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF10984 plasmid pSJTUF10984, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

30. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011395 (Salmonella enterica subsp. enterica serovar Enteritidis str. 18569 plasmid pCFSAN000006, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

31. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007529 (Salmonella enterica subsp. enterica serovar Enteritidis str. CDC_2010K_0968 isolate CDC_2010K-0968 plasmid p00, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

32. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_006855 (Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 plasmid pSCV50, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

33. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012345 (Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 plasmid pCFSAN000679_01, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

34. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041972 (Salmonella enterica subsp. enterica serovar Enteritidis strain NCCP 16206 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

35. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to MN125607 (Salmonella enterica subsp. enterica serovar Enteritidis strain 1.1-2C7 plasmid p1.1-2C7, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

36. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to MN125608 (Salmonella enterica subsp. enterica serovar Enteritidis strain 1.05-1C8 plasmid p1.05-1C8, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

37. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to MN125609 (Salmonella enterica subsp. enterica serovar Enteritidis strain 1.15-2E5 plasmid p1.15-2E5, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

38. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011943 (Salmonella enterica subsp. enterica serovar Enteritidis strain OLF-00D989 87-1 plasmid virulence, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

39. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to CP053399 (Salmonella enterica subsp. enterica serovar Paratyphi C strain 07-0715 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

40. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020824 (Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN033541 plasmid pCFSAN033541, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

41. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020826 (Salmonella enterica subsp. enterica serovar Enteritidis strain CFSAN033543 plasmid pCFSAN033543, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

42. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013098 (Salmonella enterica subsp. enterica serovar Enteritidis strain CMCC50041 plasmid pCMCC50041, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

43. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032850 (Salmonella enterica subsp. enterica serovar Enteritidis strain NCM 61 plasmid pM0061, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

44. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050711 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

45. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to LN879484 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSEN-BT, strain D7795) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

46. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018660 (Salmonella enterica subsp. enterica serovar Enteritidis strain 93-0639 plasmid pSE93-0639, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

47. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018641 (Salmonella enterica subsp. enterica serovar Enteritidis strain 70-1605 plasmid pSE70-1605, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

48. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050725 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

49. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_019120 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSENV, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

50. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018636 (Salmonella enterica subsp. enterica serovar Enteritidis strain 56-3991 plasmid pSE56-3991, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

51. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018634 (Salmonella enterica subsp. enterica serovar Enteritidis strain 49-2444 plasmid pSE49-2444, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

52. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026714 (Salmonella enterica strain FORC_078 plasmid pFORC_078_2, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

53. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018650 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1607 plasmid pSE81-1607-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

54. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030796 (Salmonella enterica strain 2017K-0021 plasmid p2017K-0021, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

55. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018656 (Salmonella enterica subsp. enterica serovar Enteritidis strain 81-1706 plasmid pSE81-1706, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

56. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050722 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE81 plasmid pSE81-1, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

57. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050718 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE95 plasmid pSE95-2, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

58. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040647 (Salmonella enterica subsp. enterica serovar Enteritidis strain SAP18-H9654 plasmid pCFSAN074385, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

59. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043434 (Salmonella enterica subsp. enterica serovar Enteritidis strain PT1 plasmid pPT1-1, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

60. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025557 (Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p1PIR00532, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

61. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017178 (Salmonella enterica strain FORC_056 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacgctgccgtccccccgctcgacgctga	Protospacer
********************************

62. spacer 3.13|965070|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0 

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatatccgcccatcggcc	Protospacer
********************************

63. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017620 (Salmonella enterica subsp. enterica serovar Typhimurium strain 22792 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

64. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046282 (Salmonella enterica strain FDAARGOS_687 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

65. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017618 (Salmonella enterica subsp. enterica serovar Typhimurium strain 22495 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

66. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035302 (Salmonella enterica subsp. enterica strain ST1539 plasmid pST1539, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

67. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040569 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-8290 plasmid pCFSAN059542, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

68. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014980 (Salmonella enterica subsp. enterica serovar Typhimurium str. CDC H2662 plasmid pSTY1-H2662, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

69. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014970 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1808 isolate ST1126-1 plasmid pSTY1-1808, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

70. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014968 (Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2011K-1702 plasmid pSTY1-2011K-1702, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

71. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037873 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS014854 plasmid pPNCS014854_S1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

72. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037876 (Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain PNCS015054 plasmid pPNCS015054_S3, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

73. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020923 (Salmonella enterica subsp. enterica strain 16A242 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

74. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014973 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY2-1898, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

75. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to CP038435 (Salmonella enterica subsp. enterica serovar Typhimurium strain E40V plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

76. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014976 (Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2009K-1640 plasmid pSTY1-2009K-1640, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

77. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_017054 (Salmonella enterica subsp. enterica serovar Typhimurium str. 798 plasmid p798_93, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

78. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047324 (Salmonella enterica subsp. enterica serovar Typhimurium strain RM13672 plasmid pRM13672, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

79. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014537 (Salmonella enterica subsp. enterica serovar Typhimurium strain SO3 isolate SOHS 02-68 plasmid pSO3_STV, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

80. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_022570 (Salmonella enterica subsp. enterica serovar Typhimurium str. DT104 unnamed plasmid, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

81. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039560 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014846 plasmid p08-4425.2, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

82. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039577 (Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014856 plasmid p10-3857.1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

83. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039586 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014859 plasmid p11-0225.1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

84. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN999012 (Salmonella enterica subsp. enterica serovar Typhimurium str. DT2 plasmid pSLT, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

85. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034480 (Salmonella enterica subsp. enterica serovar Typhimurium strain 14028 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

86. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to CP038433 (Salmonella enterica subsp. enterica serovar Typhimurium strain E40 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

87. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016390 (Salmonella enterica subsp. enterica serovar Typhimurium strain 13-931 plasmid pSLT931, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

88. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025556 (Salmonella enterica subsp. enterica serovar Typhimurium strain PIR00538 plasmid pPIR00538, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

89. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050746 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

90. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053871 (Salmonella enterica subsp. enterica serovar Typhimurium strain SS2017 plasmid pSS2017-1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

91. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053866 (Salmonella enterica subsp. enterica serovar Typhimurium strain SL7207 plasmid pSL7202-1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

92. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041006 (Salmonella enterica strain FDAARGOS_768 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

93. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039855 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014864 plasmid p11-0972.1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

94. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034231 (Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 plasmid pATCC14028, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

95. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029594 (Salmonella enterica strain DA34827 plasmid pDA34827-94, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

96. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to CP051287 (Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Gull_ST-29 plasmid pST29-94038, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

97. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017729 (Salmonella enterica subsp. enterica serovar Typhimurium str. SARA13 plasmid pSARA13, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

98. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008745 (Salmonella enterica subsp. enterica serovar Typhimurium strain VNP20009 plasmid pSLT_VNP20009, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

99. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007582 (Salmonella enterica subsp. enterica serovar Typhimurium strain 138736 plasmid, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

100. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039566 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014849 plasmid p08-7727.1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

101. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_013437 (Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSLT-BT, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

102. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034720 (Salmonella enterica subsp. enterica serovar Typhimurium strain RSE04 plasmid pRSE04, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

103. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to CP051281 (Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Junco_ST-35 plasmid pST35-99574.1A, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

104. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029596 (Salmonella enterica strain DA34833 plasmid pDA34833-94, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

105. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to CP051277 (Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Sparrow_ST-87 plasmid pST87-92921, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

106. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LS997974 (Salmonella enterica subsp. enterica serovar Typhimurium strain D23580 isolate D23580_liv plasmid D23580_liv_pSLT-BT) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

107. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to LN794247 (Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSBLT, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

108. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041974 (Salmonella enterica subsp. enterica serovar Typhimurium strain NCCP 16207 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

109. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039580 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014857 plasmid p10-3881.1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

110. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039583 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014858 plasmid p10-8609.1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

111. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044969 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007098 plasmid pPNCS007087.2, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

112. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044959 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS007087 plasmid pPNCS007087.2, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

113. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039596 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014865 plasmid p12-4331.1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

114. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039592 (Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014862 plasmid p11-0500.1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

115. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039568 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014850 plasmid p08-8136.1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

116. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to CP014577 (Salmonella enterica subsp. enterica serovar Typhimurium strain RM9437 plasmid pRM9437, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

117. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to CP013721 (Salmonella enterica subsp. enterica serovar Typhimurium strain RM10607 plasmid pRM10607, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

118. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_016864 (Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 plasmid pSTUK-100, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

119. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014962 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1899 plasmid pSTY1-1899, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

120. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_016861 (Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 plasmid pSTMDT12_L, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

121. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021464 (Salmonella enterica subsp. enterica serovar Typhimurium strain UGA14 plasmid pUGA14_2, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

122. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029838 (Salmonella enterica subsp. enterica serovar Typhimurium strain 10ST07093 plasmid p10ST07093B, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

123. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014050 (Salmonella enterica strain FDAARGOS_94 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

124. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038848 (Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014851 plasmid p09-0499.1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

125. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050736 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST90 plasmid pST90-2, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

126. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040565 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7699 plasmid pCFSAN059544, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

127. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_003277 (Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 plasmid pSLT, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

128. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022071 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

129. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051268 (Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Hawk_ST-33 plasmid pST33-93798, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

130. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029841 (Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

131. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_016855 (Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

132. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT855377 (Salmonella enterica subsp. enterica serovar Typhimurium isolate STMU2UK plasmid 2) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

133. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027413 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_320 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

134. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027409 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_317 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

135. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014359 (Salmonella enterica subsp. enterica serovar Typhimurium strain YU15 plasmid pYU15_94, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

136. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015158 (Salmonella enterica subsp. enterica serovar Typhimurium strain NC983 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

137. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018658 (Salmonella enterica subsp. enterica serovar Enteritidis strain 92-0392 plasmid pSE92-0392, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

138. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028200 (Salmonella enterica subsp. enterica serovar Typhimurium strain CFSAN018746 plasmid pGMI14-001, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

139. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_021155 (Salmonella enterica subsp. enterica serovar Typhimurium str. U288 plasmid pSTU288-1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

140. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014357 (Salmonella enterica subsp. enterica serovar Typhimurium strain SO2 isolate SOHS 02-20 plasmid pSO2_STV, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

141. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028319 (Salmonella enterica subsp. enterica serovar Typhimurium var. 5- strain CFSAN067216 plasmid pSC-09-1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

142. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050741 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST56 plasmid pST56-2, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

143. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040901 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP18-6199 plasmid pCFSAN074387, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

144. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040322 (Salmonella enterica subsp. enterica serovar Typhimurium strain PNCS014879 plasmid p16-6397.1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

145. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045950 (Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00010529 plasmid pAUSMDU00010529_01, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

146. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015599 (Salmonella enterica strain FORC_030 plasmid pFORC_030, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

147. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026701 (Salmonella enterica subsp. enterica serovar Typhimurium strain AR_0031 plasmid unitig_1_pilon, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

148. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to KX777254 (Salmonella enterica subsp. enterica serovar Typhimurium plasmid pSTV-Mu1, complete sequence) position: , mismatch: 1, identity: 0.969 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gcagacactgccgtccccccgctcgacgctga	Protospacer
******.*************************

149. spacer 3.8|964765|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 1, identity: 0.969 

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

150. spacer 3.8|964765|32|NZ_CP040700|CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 1, identity: 0.969 

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

151. spacer 3.8|964765|32|NZ_CP040700|CRISPRCasFinder,CRT matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 1, identity: 0.969 

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

152. spacer 3.13|965070|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP029990 (Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence) position: , mismatch: 1, identity: 0.969 

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

153. spacer 3.13|965070|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969 

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

154. spacer 3.13|965070|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969 

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

155. spacer 3.13|965070|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969 

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

156. spacer 2.14|947501|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 6, identity: 0.812 

cgataatttataaattttcgtccactcatcaa	CRISPR spacer
cgctgcgttataaatcatcgtccactcatcaa	Protospacer
** *.  ********. ***************

157. spacer 2.17|947684|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 6, identity: 0.812 

tgccggtttatctgctccggaccaa--tcgacta	CRISPR spacer
tgccggtctatctgctcctgaccaaggccgat--	Protospacer
*******.********** ******  .***.

158. spacer 2.17|947684|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 6, identity: 0.812 

tgccggtttatctgctccggaccaa--tcgacta	CRISPR spacer
tgccggtctatctgctcctgaccaaggccgat--	Protospacer
*******.********** ******  .***.

159. spacer 2.17|947684|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 6, identity: 0.812 

tgccggtttatctgctccggaccaa--tcgacta	CRISPR spacer
tgccggtctatctgctcctgaccaaggccgat--	Protospacer
*******.********** ******  .***.

160. spacer 2.17|947684|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 6, identity: 0.812 

tgccggtttatctgctccggaccaa--tcgacta	CRISPR spacer
tgccggtctatctgctcctgaccaaggccgat--	Protospacer
*******.********** ******  .***.

161. spacer 2.17|947684|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 6, identity: 0.812 

tgccggtttatctgctccggaccaa--tcgacta	CRISPR spacer
tgccggtctatctgctcctgaccaaggccgat--	Protospacer
*******.********** ******  .***.

162. spacer 2.17|947684|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021127 (Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence) position: , mismatch: 6, identity: 0.812 

tgccggtttatctgctccggaccaa--tcgacta	CRISPR spacer
tgccggtctatctgctcctgaccaaggccgat--	Protospacer
*******.********** ******  .***.

163. spacer 2.16|947623|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to KX657793 (Mycobacterium phage DarthPhader, complete genome) position: , mismatch: 7, identity: 0.781 

ccgcagaacgccgcatcgccgaactggacaaa	CRISPR spacer
cgttcgaccgccgcatagccgaactggacaag	Protospacer
*  . ** ******** **************.

164. spacer 2.21|947928|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044217 (Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781 

tcccaactcgtcagggcggttatccagcgcca	CRISPR spacer
ttcccgatcgtcagggcggtgattcagcgcga	Protospacer
*.** . ************* **.****** *

165. spacer 3.13|965070|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781 

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgagaaacgcctggatctccgcccaccgccg	Protospacer
*** . *********** ********.** *

166. spacer 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013525 (Rhizobium phaseoli strain R744 plasmid pRphaR744c, complete sequence) position: , mismatch: 8, identity: 0.75 

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

167. spacer 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013554 (Rhizobium phaseoli strain N931 plasmid pRphaN931b, complete sequence) position: , mismatch: 8, identity: 0.75 

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

168. spacer 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013588 (Rhizobium phaseoli strain N161 plasmid pRphaN161c, complete sequence) position: , mismatch: 8, identity: 0.75 

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

169. spacer 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013577 (Rhizobium phaseoli strain N671 plasmid pRphaN671c, complete sequence) position: , mismatch: 8, identity: 0.75 

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

170. spacer 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013549 (Rhizobium phaseoli strain R611 plasmid pRetR611b, complete sequence) position: , mismatch: 8, identity: 0.75 

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

171. spacer 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013534 (Rhizobium phaseoli strain R650 plasmid pRphaR650b, complete sequence) position: , mismatch: 8, identity: 0.75 

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

172. spacer 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013545 (Rhizobium phaseoli strain R620 plasmid pRphaR620c, complete sequence) position: , mismatch: 8, identity: 0.75 

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

173. spacer 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013565 (Rhizobium phaseoli strain N831 plasmid pRphaN831b, complete sequence) position: , mismatch: 8, identity: 0.75 

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

174. spacer 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013571 (Rhizobium phaseoli strain N771 plasmid pRphaN771c, complete sequence) position: , mismatch: 8, identity: 0.75 

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

175. spacer 2.1|946708|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_010998 (Rhizobium etli CIAT 652 plasmid pA, complete sequence) position: , mismatch: 8, identity: 0.75 

caacagcgtcccgtattctgtatcgttgacgg	CRISPR spacer
ggtcagcgtgccgtattcggtatcgttcttgg	Protospacer
 . ****** ******** ********  .**

176. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 8, identity: 0.75 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
cacgtcgctgccgtccgcccgctccacggaga	Protospacer
   * *********** ******* ***  **

177. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029211 (Aquabacterium olei strain NBRC 110486 plasmid pTB101, complete sequence) position: , mismatch: 8, identity: 0.75 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
gtagccgctgccgtcccaccgctcgtggtggc	Protospacer
*.** ************ *******  *. *

178. spacer 2.7|947074|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 8, identity: 0.75 

accacatcaatgaccacatca-----cgcagatatta	CRISPR spacer
accacatcaacgaccacatcaagcaccgcgaa-----	Protospacer
**********.**********     ***..*

179. spacer 2.15|947562|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to MN693945 (Marine virus AFVG_250M952, complete genome) position: , mismatch: 8, identity: 0.75 

accgttatctgctggttgatacttccccgagc---	CRISPR spacer
gccgttatcggctggtttatactt---aaagcaaa	Protospacer
.******** ******* ******    .***

180. spacer 2.15|947562|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to MT773554 (Myoviridae sp. isolate BML_2 genomic sequence) position: , mismatch: 8, identity: 0.75 

accgttatctgctggttgatacttccccgagc	CRISPR spacer
aacattatctgctggttgatagtttccataat	Protospacer
* *.***************** **.**  *..

181. spacer 2.22|947989|32|NZ_CP040700|CRISPRCasFinder,CRT matches to JX434031 (Pseudomonas phage JBD24, complete genome) position: , mismatch: 8, identity: 0.75 

gtcacgaggtctgacgcggatgtgatg--agtta	CRISPR spacer
tcggcgaggtctgccgcgaatgtgatggcagt--	Protospacer
 . .********* ****.********  ***

182. spacer 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP043846 (Staphylococcus epidermidis strain ATCC 12228 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75 

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

183. spacer 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP030248 (Staphylococcus epidermidis strain CSF41498 plasmid pCSF41498_2, complete sequence) position: , mismatch: 8, identity: 0.75 

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

184. spacer 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP009047 (Staphylococcus epidermidis strain SEI plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75 

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

185. spacer 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_HG813244 (Staphylococcus epidermidis PM221 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.75 

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

186. spacer 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP023971 (Staphylococcus lugdunensis strain FDAARGOS_381 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

187. spacer 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP014116 (Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed4) position: , mismatch: 8, identity: 0.75 

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

188. spacer 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP014117 (Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75 

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

189. spacer 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP014120 (Staphylococcus epidermidis strain FDAARGOS_153 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75 

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

190. spacer 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP034116 (Staphylococcus epidermidis strain CDC121 plasmid pSTA481, complete sequence) position: , mismatch: 8, identity: 0.75 

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

191. spacer 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP034113 (Staphylococcus epidermidis strain CDC120 plasmid pSTA492, complete sequence) position: , mismatch: 8, identity: 0.75 

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
tttattcagtatatttaatttttctctcgaat	Protospacer
 ********* **** ********. .*.*.*

192. spacer 3.5|964582|32|NZ_CP040700|CRISPRCasFinder,CRT matches to FQ857195 (Erwinia phage phiEa116, WORKING DRAFT SEQUENCE, 6 unordered pieces) position: , mismatch: 8, identity: 0.75 

tgcaacagcaacaggagagaatgcggcagcgt	CRISPR spacer
tgattcagcaacagcagagaatggggcaaagc	Protospacer
**   ********* ******** ****. *.

193. spacer 3.5|964582|32|NZ_CP040700|CRISPRCasFinder,CRT matches to HQ728263 (Erwinia phage vB_EamM-M7, complete genome) position: , mismatch: 8, identity: 0.75 

tgcaacagcaacaggagagaatgcggcagcgt	CRISPR spacer
tgattcagcaacagcagagaatggggcaaagc	Protospacer
**   ********* ******** ****. *.

194. spacer 3.6|964643|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP050100 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtcagttgctggaactggggcacgatctggt	CRISPR spacer
cgtcagttgctcgagctggggcagcgacatgt	Protospacer
*********** **.********  . *  **

195. spacer 2.3|946830|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022317 (Brachybacterium avium strain VR2415 plasmid unnamed1) position: , mismatch: 9, identity: 0.719 

gcagacgctgccgtccccccgctcgacgctga	CRISPR spacer
ctcagcgctgccgtcctcccggtcgacgagga	Protospacer
 . ..***********.**** ******  **

196. spacer 2.8|947135|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024907 (Paraburkholderia caledonica strain PHRS4 plasmid pPHRS4, complete sequence) position: , mismatch: 9, identity: 0.719 

cgccgtgtttacttcaatagcgacgttgtgag	CRISPR spacer
gaactcggttgcttcaacagcgacgttgtgac	Protospacer
 . * .* **.******.*************

197. spacer 2.9|947196|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to MN855642 (Bacteriophage sp. isolate 132, complete genome) position: , mismatch: 9, identity: 0.719 

aggttgaccatcgtcagcttcataaagattta	CRISPR spacer
tacataaagatcgtcaccttcacaaagattta	Protospacer
 .  *.*  ******* *****.*********

198. spacer 2.16|947623|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719 

ccgcagaacgccgcatcgccgaactggacaaa	CRISPR spacer
ccgcagaacgccgcattgccggacctcattcc	Protospacer
****************.****.**.  *.

199. spacer 3.3|964460|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP021438 (Bacillus thuringiensis strain C15 plasmid pBMB172, complete sequence) position: , mismatch: 9, identity: 0.719 

caactgtattttgcgttattacgctgaaccag	CRISPR spacer
aatacatattttccgttattaccctgaacaaa	Protospacer
 *  ..****** ********* ****** *.

200. spacer 3.5|964582|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP009827 (Xylella fastidiosa strain Pr8x plasmid pXF39, complete sequence) position: , mismatch: 9, identity: 0.719 

tgcaacagcaacaggagagaatgcggcagcgt	CRISPR spacer
gaagaaagcaacaggaaagaaggcggcagtga	Protospacer
 . .* **********.**** *******.*

201. spacer 3.5|964582|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP009825 (Xylella fastidiosa strain J1a12 plasmid pXF51-J1, complete sequence) position: , mismatch: 9, identity: 0.719 

tgcaacagcaacaggagagaatgcggcagcgt	CRISPR spacer
gaagaaagcaacaggaaagaaggcggcagtga	Protospacer
 . .* **********.**** *******.*

202. spacer 3.5|964582|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NC_002490 (Xylella fastidiosa 9a5c plasmid pXF51, complete sequence) position: , mismatch: 9, identity: 0.719 

tgcaacagcaacaggagagaatgcggcagcgt	CRISPR spacer
gaagaaagcaacaggaaagaaggcggcagtga	Protospacer
 . .* **********.**** *******.*

203. spacer 3.5|964582|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP009791 (Xylella fastidiosa strain U24d plasmid pXF51ud, complete sequence) position: , mismatch: 9, identity: 0.719 

tgcaacagcaacaggagagaatgcggcagcgt	CRISPR spacer
gaagaaagcaacaggaaagaaggcggcagtga	Protospacer
 . .* **********.**** *******.*

204. spacer 3.6|964643|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP034911 (Ensifer alkalisoli strain YIC4027 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcagttgctggaactggggcacgatctggt	CRISPR spacer
ttccgtccgctggaactgggggccgatctggt	Protospacer
. .*. ..*************  *********

205. spacer 3.8|964765|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NZ_CP015221 (Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

taagttac---gccagtgcgggcgtgttgctcatc	CRISPR spacer
---actgcgcggcgagtgcgggcgcgttgctcatg	Protospacer
   ..*.*   ** **********.*********

206. spacer 2.7|947074|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NC_008208 (Aeromonas phage 25, complete genome) position: , mismatch: 10, identity: 0.688 

accacatcaatgaccacatcacgcagatatta	CRISPR spacer
ttcacatcaatgacgacatcacccacactggt	Protospacer
 .************ ******* ** *.

207. spacer 2.7|947074|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to DQ529280 (Aeromonas salmonicida bacteriophage 25, complete genome) position: , mismatch: 10, identity: 0.688 

accacatcaatgaccacatcacgcagatatta	CRISPR spacer
ttcacatcaatgacgacatcacccacactggt	Protospacer
 .************ ******* ** *.

208. spacer 2.13|947440|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to MN694012 (Marine virus AFVG_250M887, complete genome) position: , mismatch: 10, identity: 0.688 

cttgtcggcgttgctcacgtgactatttcgca	CRISPR spacer
ggtacttacgttgctcacgtaactattacgcc	Protospacer
  *... .************.****** ***

209. spacer 2.16|947623|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU140623 (Sinorhizobium sp. M14 plasmid pSinB, complete sequence) position: , mismatch: 10, identity: 0.688 

ccgcagaacgccgcatcgccgaactggacaaa	CRISPR spacer
cgatcgaacagcgcatcgccgaactggaagcg	Protospacer
* .. ****. ***************** . .

210. spacer 2.18|947745|32|NZ_CP040700|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019603 (Croceicoccus marinus strain E4A9 plasmid pCME4A9I, complete sequence) position: , mismatch: 10, identity: 0.688 

cgccgccagctggaaaaatgccgcctgttaat	CRISPR spacer
atccgcaagctggaaaaataccgccgcatgca	Protospacer
  **** ************.*****   *.

211. spacer 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT matches to LR135896 (uncultured phage genomic DNA containing rbcL region region) position: , mismatch: 10, identity: 0.688 

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
attattcggtctattaaatttttcaaatatac	Protospacer
.******.**.************* . .* ..

212. spacer 3.2|964399|32|NZ_CP040700|CRISPRCasFinder,CRT matches to NC_049387 (Escherichia virus P2_4B2 genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.688 

gttattcagtttattaaatttttccgccaagt	CRISPR spacer
ttggcacattttatgaaatttttccgccagca	Protospacer
 * .. ** ***** **************.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1597506 : 1627117 32 Salmonella_phage(38.46%) protease,tail,holin NA
DBSCAN-SWA_2 1699198 : 1708369 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_3 1776677 : 1787183 10 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_4 1873176 : 1883761 12 Morganella_phage(25.0%) NA NA
DBSCAN-SWA_5 1986996 : 1993805 11 Salmonella_phage(33.33%) integrase,tail attL 1989206:1989228|attR 1998921:1998943
DBSCAN-SWA_6 2780419 : 2863906 92 Salmonella_phage(47.17%) portal,protease,tRNA,integrase,tail,lysis,holin,terminase attL 2804513:2804532|attR 2875055:2875074
DBSCAN-SWA_7 3128327 : 3213244 91 Enterobacteria_phage(52.38%) capsid,portal,tRNA,head,integrase,tail,holin,lysis,plate,terminase attL 3149085:3149108|attR 3186295:3186318
DBSCAN-SWA_8 4352929 : 4400533 51 Burkholderia_phage(40.91%) tRNA,tail,plate NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage