CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP042173	Yersinia sp. KBS0713 chromosome, complete genome	1 crisprs	RT,DEDDh,cas3,DinG,csa3,WYL	0	1	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042173_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042173_1

2606133-2606228

Orphan

Consensus_repeat	Method
TCATCGATTTGCTTCTGCATCTCAAGGATGGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042173_1

>merge|NZ_CP042173|1|2606133-2606228|CRISPRCasFinder
TCATCGATTTGCTTCTGCATCTCAAGGATGGAGTTATCACGATCAGCCAGCGCTTGCGTCTGTTCATCGATTTGCTTCTGCATCTCAAGGATGGAG

>NZ_CP042173|1|1|2606133-2606228|CRISPRCasFinder
TCATCGATTTGCTTCTGCATCTCAAGGATGGAG	TTATCACGATCAGCCAGCGCTTGCGTCTGT
TCATCGATTTGCTTCTGCATCTCAAGGATGGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042173.1\|WP_138775285.1\|2601957_2602356_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042173.1\|WP_138775283.1\|2599183_2599765_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042173.1\|WP_138775297.1\|2614234_2614582_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042173.1\|WP_138775296.1\|2613053_2614076_-\|terminase-small-subunit	unknown	unknown	gnl\|CDD\|377071
NZ_CP042173.1\|WP_138775293.1\|2607893_2609120_-\|DUF2213-domain-containing-protein	unknown	unknown	gnl\|CDD\|370768
NZ_CP042173.1\|WP_138775962.1\|2607398_2607869_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042173.1\|WP_138775964.1\|2609123_2609717_-\|phage-head-morphogenesis-protein	unknown	unknown	gnl\|CDD\|309383
NZ_CP042173.1\|WP_138775292.1\|2606441_2607386_-\|DUF2184-domain-containing-protein	unknown	unknown	gnl\|CDD\|370759
NZ_CP042173.1\|WP_138775288.1\|2604825_2605224_-\|head-tail-adaptor	unknown	unknown	unknown
NZ_CP042173.1\|WP_138775960.1\|2604296_2604680_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042173.1\|WP_138775290.1\|2605701_2606106_-\|DUF4054-domain-containing-protein	unknown	unknown	gnl\|CDD\|372538
NZ_CP042173.1\|WP_138775298.1\|2614616_2614829_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042173.1\|WP_138775295.1\|2611208_2612825_-\|TerL-protein	unknown	unknown	gnl\|CDD\|224697
NZ_CP042173.1\|WP_138775289.1\|2605210_2605705_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042173.1\|WP_050079836.1\|2601766_2601958_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042173.1\|WP_138775284.1\|2599773_2601780_-\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381594
NZ_CP042173.1\|WP_138775299.1\|2614821_2615154_-\|DUF2570-domain-containing-protein	unknown	unknown	unknown
NZ_CP042173.1\|WP_138775286.1\|2602366_2602807_-\|DUF3277-family-protein	unknown	unknown	gnl\|CDD\|371667
NZ_CP042173.1\|WP_138775294.1\|2609736_2611209_-\|DUF1073-domain-containing-protein	unknown	unknown	gnl\|CDD\|368870
NZ_CP042173.1\|WP_138775287.1\|2602818_2604294_-\|DUF3383-family-protein	unknown	unknown	gnl\|CDD\|371768

Protein	Function_ID	Function_description	E-value
NZ_CP042173.1\|WP_138775295.1\|2611208_2612825_-\|TerL-protein	gnl\|CDD\|224697	COG1783, XtmB, Phage terminase large subunit [General function prediction only].	0.000378908
NZ_CP042173.1\|WP_138775293.1\|2607893_2609120_-\|DUF2213-domain-containing-protein	gnl\|CDD\|370768	pfam09979, DUF2213, Uncharacterized protein conserved in bacteria (DUF2213). Members of this family of bacterial proteins comprise various hypothetical and phage-related proteins. The exact function of these proteins has not, as yet, been determined.	1.11072e-52
NZ_CP042173.1\|WP_138775286.1\|2602366_2602807_-\|DUF3277-family-protein	gnl\|CDD\|371667	pfam11681, DUF3277, Protein of unknown function (DUF3277). This family of proteins represents a putative bacteriophage protein. No function is currently known.	9.57581e-77
NZ_CP042173.1\|WP_138775284.1\|2599773_2601780_-\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381594	cd00254, LT-like, lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	2.25308e-33
NZ_CP042173.1\|WP_138775964.1\|2609123_2609717_-\|phage-head-morphogenesis-protein	gnl\|CDD\|309383	pfam04233, Phage_Mu_F, Phage Mu protein F like protein. Members of this family are found in double-stranded DNA bacteriophages, and in some bacteria. A member of this family is required for viral head morphogenesis in bacteriophage SPP1. This family is possibly a minor head protein. This family may be related to the family TT_ORF1 (pfam02956).	5.65056e-17
NZ_CP042173.1\|WP_138775292.1\|2606441_2607386_-\|DUF2184-domain-containing-protein	gnl\|CDD\|370759	pfam09950, DUF2184, Uncharacterized protein conserved in bacteria (DUF2184). This domain, found in various hypothetical bacterial proteins, has no known function.	3.35189e-90
NZ_CP042173.1\|WP_138775294.1\|2609736_2611209_-\|DUF1073-domain-containing-protein	gnl\|CDD\|368870	pfam06381, DUF1073, Protein of unknown function (DUF1073). This family consists of several hypothetical bacterial proteins. The function of this family is unknown.	4.44626e-137
NZ_CP042173.1\|WP_138775296.1\|2613053_2614076_-\|terminase-small-subunit	gnl\|CDD\|377071	pfam03592, Terminase_2, Terminase small subunit. Packaging of double-stranded viral DNA concatemers requires interaction of the prohead with virus DNA. This process is mediated by a phage-encoded DNA recognition and terminase protein. The terminase enzymes described so far, which are hetero-oligomers composed of a small and a large subunit, do not have a significant level of sequence homology. The small terminase subunit is thought to form a nucleoprotein structure that helps to position the terminase large subunit at the packaging initiation site.	1.05731e-17
NZ_CP042173.1\|WP_138775290.1\|2605701_2606106_-\|DUF4054-domain-containing-protein	gnl\|CDD\|372538	pfam13262, DUF4054, Protein of unknown function (DUF4054). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 120 and 152 amino acids in length.	7.02709e-29
NZ_CP042173.1\|WP_138775287.1\|2602818_2604294_-\|DUF3383-family-protein	gnl\|CDD\|371768	pfam11863, DUF3383, Protein of unknown function (DUF3383). This family of proteins are functionally uncharacterized. This protein is found in bacteria and viruses. Proteins in this family are typically between 356 to 501 amino acids in length.	1.97008e-163

>NZ_CP042173.1|WP_138775290.1|2605701_2606106_-|DUF4054-domain-containing-protein
MPRNRNLPTAAQFRTDFPQFENEARYPTAAIQFRLSLADNLLDENLLDNMFPYLVELFVAHYITLQAKDMQSAALGGASGATNGVAASKSVDKVSVSYDNSATLNPDAGFWNFTRYGAEFYQIILMFGAGGRQL
>NZ_CP042173.1|WP_138775289.1|2605210_2605705_-|hypothetical-protein
MKSGLKVRVDKTNDVLAALKAIGRKDVLIGIPEEKSEREDIPFGNAGIGYINEFGSPAQNIPPRPHLQPGVRSVQDETTQKLKQAAQAVLAGNQAAADRALEQAGIIASNAVKRYITITGFTPLADSTISARLRRGRSGDKPLIDTGQYRRTITSIVRDKYAKS
>NZ_CP042173.1|WP_138775288.1|2604825_2605224_-|head-tail-adaptor
MPNLDVTDVLFDPDFCDMSLVVKRNMQTVDADGFATNTVIEKGFAGVVTVDRSLESRRMMSGNVIGGAILIVTVERLTQGQTGRDADIVTYQNRDYRVTFVDPYTAYGAGFVQAHCELLPFDGGIPIEQQQQ
>NZ_CP042173.1|WP_138775960.1|2604296_2604680_-|hypothetical-protein
MEADVNWCGFGVIDIPDDASPAFENQTENSTELWRHEEVECMASFYGPNGQRYATQFRDGLTITQNNDELVRMGLSLARCSRINPFPELINNKWVRRFDITIKLRRKVIREYGIKSLTSAPVKFFGE
>NZ_CP042173.1|WP_138775287.1|2602818_2604294_-|DUF3383-family-protein
MSQGLPVSNIVNVTVNMAVRAAMARNFGSLLVVGPSPVIDAHERLRNYSSATDIASDFGLTAPEYQAANLYYQQSPQPIDSYVGRWVKEDAAGLLRGAILNPTQQLMANFTAIADGSMKITVDGVETVVSDVDWTDELNLNGVAARVEESLLIATVIWNGSRFIITSKTTGAASSVGYGSANATGTDISVLLGLVESAGALPVQGLANETIQACIYKLADMSTRWYGLVIADPSLSDTDVISIASFIQSDDVSRVYGHTTQVTTALDADIDTDIASKLKAAKYARTLVQYSSASPYAAASIFGRAFTVNFNGNNTTITLKFKQQPGITAESLEQSQANALKAKNCNVFVNYDNDTAIIQEGVMCNGDFFDERHGLDWLQNYVQNNLYNLLFTSPTKIPQTDAGVTRLLANVEKSLDQSVINGLVAPGVWGGDSFGVLATGDTLTKGYYVYAPPVASQAQADREGRKAPVMQSAIKLAGAVHYADVIINVNR
>NZ_CP042173.1|WP_138775286.1|2602366_2602807_-|DUF3277-family-protein
MSTYSFMDVTASIVGVGGSFDLGYGAAVTDEGITTSMIENKNTMTIGADGEGMHSLHAGKGGTVTVNLLKTSPTNRKLSVMYNAQAQSSATWGNNIILIRNTASGDTFAARGCAFQKQPDFNNAKDGALVAWVFDCIKVDQLLGTF
>NZ_CP042173.1|WP_138775285.1|2601957_2602356_-|hypothetical-protein
MEFTIKGIEYRSKKLDVFAQLKVSRKLLPLLAGILKDLRSGTVTIETALPSIAQSLSDISDEDCNAIIHPCLAIVTRKHGKAYNPIFSGGELMFDDIDLMAMLQIVGRVVGNSMGNFLHELQESAPAEPPAA
>NZ_CP042173.1|WP_050079836.1|2601766_2601958_-|hypothetical-protein
MLDTLPGGEDFILRPVKHQLTTMGEIKSGNLDLLDIALLNDYLDLEAENQAKIDKWRADNEQR
>NZ_CP042173.1|WP_138775284.1|2599773_2601780_-|transglycosylase-SLT-domain-containing-protein
MSNAETIKDFLVSLGFELDEAGEKKFSAVVAGVTANVLKMGAVVEGAALAVVGFTTKIADGLDKVYFASQRTGASVAGIKALGYAASQLGVDAASAQGSLESLARFIRNSPGAEGFLNRLGIQTRSANGNMRDTSAIFTGLSAKLSSMPYYRANQYAQMLGIDENTLMAMRKGLGGFGSEYALTAKKIGFNADTAAKQSNRFMTSMRNLTMTLGQARDKIGANLANGLAGDIDALRKQLLDNWPKIEAVLMKVIKGILWAGDAVTRVLWRTGQAVGDVINWFKKLDPVTQQLIMLSGGLLLAWRLLNTAFLTSPVGIILSLGAALFALYDDYKTWKEGGESLIDWGQWEQEINAALEGIDELTKSIKGVGVEIARLLNINLKNWTLKGDIENLTKQFGEFGKMLSMIGDLINALKEGNWVEVARIGKALLSQGSDQPDAMPAVTDSANSAADWVKDKTGFDPRSVGRWLRGESDTTEPDQYAQSVKRPTASASGAALLGWLQPTLTKLEALNNLPAGLLRSVAITESGGNQFAISGAGAKGLFQFMDATAKDMGLKGNDVFDPEKSAAAAAKYLSMLLKMNGGDLDKALASYNWGIGNVQKHGLDLMPRETRNYIPKVHSNMPGGGLQQETNIYITGVSDPVSAGNEVAGRQTNVNARLTQQLNTPTR
>NZ_CP042173.1|WP_138775283.1|2599183_2599765_-|hypothetical-protein
MDILSAIFRQQTRKIGLLVPSVIISEKHQDALEITEHPVEVGAAVNDHAYKRAAEVTMEVGFAGGGSLLDFVDTSTIGLSLGKSPEEVYQELRELQESREPIDVITGKRKYSNMLIRAIEVTTDKTSENVLMCVLTLREVILSQTESVTVADKENMRDGVSTSAMQNTGTKAPAPANKSLLQSSLGWVKEKLA
>NZ_CP042173.1|WP_138775292.1|2606441_2607386_-|DUF2184-domain-containing-protein
MITYDSQRTIDASGAFLIGELERLDPEINLPLVGTTYTRDIQFREDVNIADEISSFTKTGFAAAGTGANPKGKNWVSQESTALAGINLDIDKKGFPLTLWGMELGWTVIELAAAQQMGRPIDTQKYDGMVLKWHMDADEQVYLGDTDLGVKGLANYTGVAIGNAVKSWLTSTVAEIRDSINKVLSDAWAASGYTVVPKDLLLPPEQYAYLAQVIVSDAGNQSLLTYLTTNTISFHQNGIPLNIRAVKWLKGAGVAGKDRMVAYTNDRKYVRFPLVPLTSIPIQYRGLWQLVTYYGKLGVVEAPYIETLAYFDGI
>NZ_CP042173.1|WP_138775962.1|2607398_2607869_-|hypothetical-protein
MPAGIAGAVSRPQDLTIEPVLINTANPFSQYGLAGKFSGNFFVPLEEDDTADKIVGIFVRPFPTTSTPDKVRQIGTSNNFAGDALKRGYLSVNIGATAAGVTKGAPVYIRIAGATDDSPLGSVLATAIADTTVVLPNAYFTGAGDAAGNTEISYKI
>NZ_CP042173.1|WP_138775293.1|2607893_2609120_-|DUF2213-domain-containing-protein
MQYFYNSRLGETRFTMSDGGLLCKDVPIGRTGVQLYGGEELDDIEPDSDGEILVERSEEDVFRPETLASFEGMTFTVSHPIEDVTPDNWGRYAAGHIQNVRRGTGDQSDLMIADIVVKKAEAIKVILEDGVDQISAGYDAEYQQTARGKARQYDIIANHVALVPTGRAGKRCSIGDSKRMTTNNTWLAKLRRAIKTKDAAAMEEAMESVPSELTSDEGAGELPKAINITINPQQPLPKQEPELDAIATNDSGDIETRVAAMETTLAAILEKLGSTTDADPDEEEEGRRITSDAAYHQDVVSRAEWIVPGIKLPEGGKLASFKRTVLDAAFKTTEGEKLLKGIVGDKPDFAKMPKLSLDAAFIAASEIAKGRNNLQLNRRTIDSAIPNRRPTAADLNKQNAAFWAKKGN
>NZ_CP042173.1|WP_138775964.1|2609123_2609717_-|phage-head-morphogenesis-protein
MDSLNRYSDLIDGWARTTASKMFDAVNAKDVAMWRSNSQEISVGLRQIVENTAVGQVARSIVEDQVKLIKSLPLQAADRVQDIHNQAIEAVITGGRAGPFAKEIAKSGDVAISRANMIARTEIGRASTALTQARSLSIGSSGYIWRTAEDSDVRHSHQKMEGKFVRWDNPPTLDGMTGHAGALPNCRCYCEVIIPER
>NZ_CP042173.1|WP_138775294.1|2609736_2611209_-|DUF1073-domain-containing-protein
MSRKRKTGKASSPQRTTDTYQNLTARYGLRTENQSADYSYQPNWTSRNRQLIENAYRSSWLVGAAVDTIADDMTRKGINITSKMAPDAKMRIEGRWEELSLWDAINDTIKWSRLYGGAIGFIMIDGQAPETPLRVETIGKDAFKGLLVLDRWMVTPSISDRVTEMGPDLGMPKYYQVVTTGSGIPSMKIHHSRVIRLDGVGLPYQQKRTENEWGMSVIERLFDRLLAFDSTSTGAAQLIFKAHLRTYKINKFRELVAMGGKAFDGLMKSMDMIRQFQSTEGLTLMDATDTFETHSYAFGGLSDVMAQFAQQIAGAIGIPLVRLFGQSPAGFSTGDADLANYYDNIGTQQERRLRRPLRRLFEVIHYSEFSSPLPDGFSFDFNPLWQMSEPDRATVAEKTVNTINAAMDSGLLTLQGGMTELRDKAGITGIGSSISDEDIESAKDIDPPNLGENADLNPPEVAPRGDPISNSATQDSANGRRHRKWYLRWF
>NZ_CP042173.1|WP_138775295.1|2611208_2612825_-|TerL-protein
MPIPFPFDFKNPDYMQVFEWRMERLQRIRQQPELLPVMKAFYKDNPAQFIIDWGMTVDPRNVERGLPARIPFLLFPKQEEWIEWFTEHWRTSRPGITEKTRDMGMSWLTVGMAASLCLFNKGIIAGFGSRKEEYVDKIGSPKSLFDKARNFVGLLPFEFRGGWNPKAHAPHMRILFPETESAMTGEAGDGIGRGDRTSFYIVDESSHLERPYLVDASLSATTNCRQDISTPNGMANSFAERRHSGKVDVFTFHWRDDPRKDDAWYAKQVEELDPVTVAQEIDINYSASVEGVLIPSAWVQAAINAHEVLGIVPTGQRLGALDIADEGKDTNAFAGRHGFLLESIEEWSGKGDDIFGTVQKAFDICDAQNLETFRFDTDGLGAGARGDARVINEQREEQRRRHIVATPFRGSGGVTDPDDEAVPGDNGQQGRLNKDFFANAKAQGWWSLRTRFQKTYRAVKENMEFDPDEIISIPKDLKNLTKLTSELSQPTYSVNGVGKIVVDKKPDGTKSPNLADSAMILYAPMDNALDIWLRLGGA
>NZ_CP042173.1|WP_138775296.1|2613053_2614076_-|terminase-small-subunit
MAKDTDWRGIERDYRSGALSIRELAKKYGVSDTAVRKRAKAEEWPKHEQVRNNVGSQTISANQNKKSRTKYRKPAVHVEREIDSEYLANGSDEPEFILNPDEYGLNDMQARFVSEYLIDLNSTAAYKRSGGKGEGNTAYVNASRMYRNAKVSRAIRDALDARERRTRITQDAVLKWWWDIATADASQITELRRLCCRHCWGFGYQYQWRDAVEFDEARLKAVESKKREPLDVGGYGFDATLDPNPDCPRCNGEGVGRTHFHDTRDLRGAARRLFSGVKEGKFGIEAITRNQDEALKMVAQHLGMLRNKTEISGPDGGPVKTETVNMTPDEAAEAYRKLMG
>NZ_CP042173.1|WP_138775297.1|2614234_2614582_+|hypothetical-protein
MGLIIKDCFISECNKGVVAPDSLDINISGTVFEKTGIAIDIYPSNQELLQVGLPENTPKELLAEAVETLKKLQSSTMEEKQAAISKSKLFGWLNNGASIATVTTAVMEMIKFFSQ
>NZ_CP042173.1|WP_138775298.1|2614616_2614829_-|hypothetical-protein
MNKPIKPPITEPALLLPPESALIPCEVPEFTGITWGDGGLYAMELKRELRICKGRLDEVIGWRQNLIKYY
>NZ_CP042173.1|WP_138775299.1|2614821_2615154_-|DUF2570-domain-containing-protein
MNKAMGIVIAALVVIVSALFFNSYRLANQVEKTEAELVVEQATNTALGNIIDAYQVNDAANRAATARQLENERKLRNASELQVARFKAAAASDDCSIKPMPGDVISVMRE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	AP018706	Uncultured bacterium plasmid pSN0729-70 DNA, complete sequence	16458-16487	7	0.767
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_CP020910	Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence	199662-199691	8	0.733
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_CP026242	Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence	146549-146578	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_CP009883	Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence	314552-314581	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_CP026196	Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence	118033-118062	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_CP026208	Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence	27873-27902	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_CP026391	Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence	314303-314332	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_CP011635	Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence	320248-320277	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NC_019360	Citrobacter freundii plasmid pNDM-CIT, complete sequence	188263-188292	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	KY320277	Leclercia adecarboxylata strain Lec-476 plasmid pLec-476, complete sequence	297090-297119	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_MF072964	Citrobacter freundii strain P10159 plasmid pP10159-4, complete sequence	196042-196071	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_CP010380	Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence	123052-123081	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_CP026171	Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence	91848-91877	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	KP899803	Salmonella enterica strain 8025 plasmid p8025, complete sequence	204408-204437	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	CP009869	Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence	73997-74026	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_CP032179	Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence	87687-87716	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_CP029142	Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence	278860-278889	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	NZ_CP031135	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence	70095-70124	9	0.7
NZ_CP042173_1	1.1\|2606166\|30\|NZ_CP042173\|CRISPRCasFinder	2606166-2606195	30	KJ018211	Shewanella sp. phage 1/40, complete genome	80086-80115	9	0.7

1. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to AP018706 (Uncultured bacterium plasmid pSN0729-70 DNA, complete sequence) position: , mismatch: 7, identity: 0.767

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
acatacatatcagccagcgcttgcgtgtgt	Protospacer
 .**    ****************** ***

2. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_CP020910 (Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence) position: , mismatch: 8, identity: 0.733

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
ggatcacgatcacccagagcttgcggtttc	Protospacer
  ********** **** ******* .* .

3. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_CP026242 (Citrobacter freundii complex sp. CFNIH9 plasmid pCFR-eb27, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

4. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_CP009883 (Pantoea sp. PSNIH1 plasmid pPSP-a3e, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

5. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_CP026196 (Enterobacteriaceae bacterium ENNIH1 plasmid pENT-1f0b, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

6. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_CP026208 (Escherichia coli strain ECONIH5 plasmid pECO-109b, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

7. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_CP026391 (Leclercia sp. LSNIH3 plasmid pLEC-7c0d, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

8. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_CP011635 (Klebsiella oxytoca strain CAV1374 plasmid pKPC_CAV1374, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

9. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NC_019360 (Citrobacter freundii plasmid pNDM-CIT, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

10. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to KY320277 (Leclercia adecarboxylata strain Lec-476 plasmid pLec-476, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

11. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_MF072964 (Citrobacter freundii strain P10159 plasmid pP10159-4, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

12. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_CP010380 (Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-328.905kb, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

13. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_CP026171 (Leclercia sp. LSNIH1 plasmid pLEC-1cb1, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

14. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to KP899803 (Salmonella enterica strain 8025 plasmid p8025, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

15. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to CP009869 (Pantoea sp. PSNIH2 plasmid pPSP-75c, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

16. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_CP032179 (Citrobacter freundii strain AR_0116 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

17. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_CP029142 (Klebsiella michiganensis strain AR375 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

18. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to NZ_CP031135 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
aaatcacgatcagccagcgcgtgagcaccg	Protospacer
  ****************** ** *. .

19. spacer 1.1|2606166|30|NZ_CP042173|CRISPRCasFinder matches to KJ018211 (Shewanella sp. phage 1/40, complete genome) position: , mismatch: 9, identity: 0.7

ttatcacgatcagccagcgcttgcgtctgt	CRISPR spacer
agccttcggtcagctagcgcttgcgtctgg	Protospacer
   .. **.*****.**************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

402837 : 488408

Salmonella_phage(42.11%)

plate,tRNA,integrase,portal,protease,tail,head,lysis,capsid,holin

attL 409061:409076|attR 458775:458790

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138774716.1\|402837_403803_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_032896618.1\|404218_405103_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_057648828.1\|405214_406669_-	sodium/pantothenate symporter	NA	NA	NA	NA
WP_005271356.1\|406658_406901_-	YhdT family protein	NA	NA	NA	NA
WP_005271359.1\|407420_408770_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_004711025.1\|408781_409246_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
409061:409076	attL	NA	NA	NA	NA
WP_032896624.1\|409278_409731_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_032896626.1\|409950_410550_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_005271370.1\|410549_411590_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_005271373.1\|411790_412768_-	oxidoreductase	NA	NA	NA	NA
WP_032896630.1\|413050_414970_+	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_004875762.1\|415303_416347_+	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.0e-06	22.3
WP_005271379.1\|416457_417441_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_032814839.1\|417437_417926_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_005271381.1\|417939_418533_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_032814841.1\|418522_419992_+	ribonuclease G	NA	NA	NA	NA
WP_138774717.1\|420069_423942_+	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_049602645.1\|423938_424793_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_005271388.1\|424805_426251_+\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_005271390.1\|426279_427191_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_005271391.1\|427533_427737_+	AaeX family protein	NA	NA	NA	NA
WP_005271393.1\|427744_428680_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_005271395.1\|428681_430637_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_138775185.1\|430758_432228_+	succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_138775186.1\|432336_432795_+	ribonuclease	NA	NA	NA	NA
WP_005271405.1\|432799_433066_+	hypothetical protein	NA	NA	NA	NA
WP_005271408.1\|433203_433752_-	ribosome-associated protein	NA	NA	NA	NA
WP_050323587.1\|433889_434882_-\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	3.6e-109	60.4
WP_050917242.1\|434948_435251_-	helix-turn-helix transcriptional regulator	Q1JS83	Enterobacteria_phage	9.5e-21	54.0
WP_138774718.1\|435368_435692_+	hypothetical protein	NA	NA	NA	NA
WP_138774719.1\|435688_435898_+	hypothetical protein	NA	NA	NA	NA
WP_138774720.1\|435894_436209_+	hypothetical protein	NA	NA	NA	NA
WP_138775187.1\|436389_436695_+	hypothetical protein	NA	NA	NA	NA
WP_138774721.1\|436777_436975_+	DUF2732 family protein	NA	NA	NA	NA
WP_138774722.1\|436982_437807_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1S6L011	Salmonella_phage	5.1e-77	54.6
WP_138774723.1\|437799_440346_+	replication endonuclease	E5G6L9	Salmonella_phage	6.0e-124	35.5
WP_138774724.1\|440494_441178_+	DNA adenine methylase	A0A0M4S5U3	Salmonella_phage	6.2e-76	62.7
WP_138774725.1\|441180_441432_+	hypothetical protein	NA	NA	NA	NA
WP_138774726.1\|441424_441733_+	hypothetical protein	Q7Y3Y1	Yersinia_phage	4.8e-12	40.4
WP_080382447.1\|441732_442077_+	hypothetical protein	H9C172	Pectobacterium_phage	6.6e-18	40.7
WP_138774727.1\|442771_443026_-	DUF2513 domain-containing protein	NA	NA	NA	NA
WP_138774728.1\|443175_444204_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	6.3e-133	66.6
WP_057618789.1\|444200_444926_-	hypothetical protein	A0A077K8Q7	Ralstonia_phage	3.2e-30	35.4
WP_049598908.1\|444925_446689_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	5.2e-228	63.4
WP_082397885.1\|446764_447670_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	1.8e-54	54.1
WP_049598912.1\|447706_448762_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.7e-125	64.7
WP_049598914.1\|448767_449421_+	hypothetical protein	F1BUQ7	Erwinia_phage	1.6e-41	44.9
WP_049598917.1\|449654_450146_+\|head	head completion/stabilization protein	A0A1S5NNA6	Burkholderia_phage	1.6e-30	48.4
WP_049598920.1\|450145_450349_+\|tail	tail protein X	E5G6M9	Salmonella_phage	3.0e-23	67.2
WP_071841755.1\|450379_450766_+\|holin	holin	NA	NA	NA	NA
WP_049598922.1\|450752_451148_+	M15 family metallopeptidase	A9DET4	Yersinia_phage	2.0e-47	71.0
WP_049598925.1\|451152_451578_+\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	3.5e-21	48.1
WP_072083670.1\|451465_451690_+	hypothetical protein	Q7Y4E1	Escherichia_virus	2.5e-10	48.5
WP_049598928.1\|451676_452144_+\|tail	phage tail protein	F1BUP9	Erwinia_phage	1.8e-42	55.8
WP_138774729.1\|452140_452587_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	8.5e-34	49.3
WP_049598934.1\|452602_452860_-	hypothetical protein	NA	NA	NA	NA
WP_049598936.1\|452921_453623_+	hypothetical protein	NA	NA	NA	NA
WP_049598939.1\|453971_454262_-	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	1.8e-05	39.4
WP_049598943.1\|454242_454515_-	BrnT family toxin	NA	NA	NA	NA
WP_049598946.1\|454651_455287_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	5.4e-66	62.9
WP_049598948.1\|455283_455640_+\|plate	baseplate assembly protein	Q7Y4D7	Escherichia_virus	1.1e-31	57.7
WP_049598951.1\|455639_456548_+\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	1.3e-118	72.5
WP_049598954.1\|456540_457149_+\|tail	phage tail protein I	F1BUP2	Erwinia_phage	1.3e-88	76.0
WP_074007273.1\|457145_458315_+	hypothetical protein	F1BUP1	Erwinia_phage	1.2e-98	63.6
WP_054872124.1\|458317_458797_+\|tail	phage tail protein	F1BUP0	Erwinia_phage	2.1e-38	45.5
458775:458790	attR	NA	NA	NA	NA
WP_049598960.1\|458920_460096_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	2.7e-180	80.1
WP_042562520.1\|460107_460623_+\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	3.2e-61	68.0
WP_049598964.1\|460779_461091_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	5.9e-18	53.6
WP_042562521.1\|461105_461225_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.4e-07	56.4
WP_049598967.1\|461217_464142_+\|tail	phage tail tape measure protein	Q9ZXK0	Pseudomonas_virus	3.7e-154	46.1
WP_049598971.1\|464153_464618_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	8.5e-45	64.6
WP_049598974.1\|464614_465715_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	2.9e-128	65.4
WP_013649733.1\|465789_466005_+	phage transcriptional activator, Ogr/Delta	S4TNZ3	Salmonella_phage	1.1e-18	60.6
WP_054872105.1\|466476_467829_+	group II intron reverse transcriptase/maturase	H7BVN7	unidentified_phage	8.6e-13	25.2
WP_138775188.1\|468069_468330_+	hypothetical protein	NA	NA	NA	NA
WP_005271411.1\|468608_469949_+\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_054872818.1\|470147_470534_+	cytochrome b562	NA	NA	NA	NA
WP_032896665.1\|470634_471045_-	nucleoside diphosphate kinase regulator	NA	NA	NA	NA
WP_054872817.1\|471441_471786_+	PRD domain-containing protein	NA	NA	NA	NA
WP_005271418.1\|471809_472175_+	hypothetical protein	NA	NA	NA	NA
WP_032815603.1\|472174_472471_+	DUF4312 family protein	NA	NA	NA	NA
WP_004701420.1\|472555_473332_+	DUF4311 domain-containing protein	NA	NA	NA	NA
WP_005188514.1\|473350_474004_+	DUF4310 family protein	NA	NA	NA	NA
WP_138774730.1\|474086_475256_+	amidohydrolase/deacetylase family metallohydrolase	NA	NA	NA	NA
WP_138774731.1\|475239_476352_+	DgaE family pyridoxal phosphate-dependent ammonia lyase	NA	NA	NA	NA
WP_005271427.1\|476355_477096_+	KDGP aldolase family protein	NA	NA	NA	NA
WP_138774732.1\|477292_479221_+	PRD domain-containing protein	NA	NA	NA	NA
WP_138774733.1\|479272_482005_-	magnesium-translocating P-type ATPase	M1HN09	Paramecium_bursaria_Chlorella_virus	1.4e-38	26.4
WP_138774734.1\|482547_483495_+	HTH-type transcriptional regulator TreR	NA	NA	NA	NA
WP_005271434.1\|483821_485237_+	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
WP_054872814.1\|485317_486979_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_032898338.1\|487673_488408_-\|protease	proteasome-type protease	NA	NA	NA	NA

DBSCAN-SWA_2

784216 : 893328

100

Salmonella_phage(50.0%)

plate,tRNA,integrase,portal,tail,head,lysis,capsid,holin

attL 859398:859416|attR 893420:893438

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138774778.1\|784216_785278_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_138774779.1\|785274_787140_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_138774780.1\|787144_787723_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_138774781.1\|787807_788857_-	hypothetical protein	NA	NA	NA	NA
WP_138774782.1\|788969_789467_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_005272148.1\|789715_791218_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_005272151.1\|791221_791749_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_054873073.1\|791877_792900_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_138774783.1\|792969_796602_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_138774784.1\|796616_797828_-	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_032896924.1\|797830_799177_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_032896926.1\|799218_799749_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_005272173.1\|799874_800267_-	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_005272176.1\|800276_800912_-	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_138774785.1\|800937_801999_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_138774786.1\|801998_804536_-	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_005272179.1\|805241_807296_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	3.1e-30	24.9
WP_005272180.1\|807369_807846_+	Dabb family protein	NA	NA	NA	NA
WP_005272181.1\|808100_808487_+	DUF937 domain-containing protein	NA	NA	NA	NA
WP_138775197.1\|808812_809082_+	DUF3761 domain-containing protein	NA	NA	NA	NA
WP_050413677.1\|809155_809575_-	hypothetical protein	NA	NA	NA	NA
WP_005272183.1\|809699_810416_-	transcription regulator SdiA	NA	NA	NA	NA
WP_138774787.1\|810990_814470_+	hypothetical protein	NA	NA	NA	NA
WP_138774788.1\|814941_815826_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_138774789.1\|816070_818122_+	hypothetical protein	NA	NA	NA	NA
WP_138774790.1\|818171_821099_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_138774791.1\|821193_821880_-	response regulator transcription factor	NA	NA	NA	NA
WP_138774792.1\|821876_823289_-	hypothetical protein	NA	NA	NA	NA
WP_005272195.1\|823285_823723_-	CaiF/GrlA family transcriptional regulator	NA	NA	NA	NA
WP_138774793.1\|824527_826477_-	hypothetical protein	NA	NA	NA	NA
WP_005272200.1\|826900_827629_+	aquaporin Z	NA	NA	NA	NA
WP_032896938.1\|828078_828654_+\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	5.6e-54	55.8
WP_138774794.1\|829296_830259_+	hypothetical protein	NA	NA	NA	NA
WP_005272214.1\|831402_831984_+	hypothetical protein	NA	NA	NA	NA
WP_005272215.1\|832216_832723_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_138774795.1\|833025_835593_+	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_054873082.1\|835628_836357_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_138775198.1\|836425_836938_+	fimbrial protein	NA	NA	NA	NA
WP_005272228.1\|837008_837545_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_138774796.1\|837649_838732_+	hypothetical protein	NA	NA	NA	NA
WP_138774797.1\|839060_840071_-	zinc-binding dehydrogenase	E3SJ82	Synechococcus_phage	1.6e-11	28.6
WP_005272233.1\|840246_841143_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_138774798.1\|841174_841426_-	hypothetical protein	NA	NA	NA	NA
WP_138774799.1\|844285_845872_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_138774800.1\|845903_847667_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_138775200.1\|847666_848728_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_138775199.1\|848747_849245_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_138774801.1\|849246_849690_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_138774802.1\|849714_851103_+	type VI secretion protein ImpA	NA	NA	NA	NA
WP_071984961.1\|851689_851869_-	hypothetical protein	NA	NA	NA	NA
WP_138774803.1\|852015_854178_+	ornithine decarboxylase SpeF	NA	NA	NA	NA
WP_138774804.1\|854252_855002_-	TSUP family transporter	NA	NA	NA	NA
WP_005279448.1\|855171_856248_-	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_004876892.1\|856299_856572_-	oxidative damage protection protein	NA	NA	NA	NA
WP_072083833.1\|856635_857694_-	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_032899056.1\|858318_859038_+\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_032815284.1\|859037_859364_+	YggL family protein	NA	NA	NA	NA
859398:859416	attL	NA	NA	NA	NA
WP_138774805.1\|859531_859867_-	hypothetical protein	NA	NA	NA	NA
WP_138774806.1\|859995_860235_-	hypothetical protein	A0A2I8TV89	Erwinia_phage	1.3e-09	50.0
WP_138774807.1\|860297_861407_-	phage late control D family protein	A0A0M4REC6	Salmonella_phage	4.4e-132	65.5
WP_138774808.1\|861547_862726_+\|tail	phage tail sheath protein	A0A0M4S6M1	Salmonella_phage	6.1e-156	67.3
WP_049601750.1\|862737_863253_+\|tail	phage major tail tube protein	A0A0M5M1I5	Salmonella_phage	6.7e-67	71.9
WP_138774809.1\|863722_866929_+\|tail	phage tail tape measure protein	A0A0M4R2V3	Salmonella_phage	1.0e-160	38.3
WP_138774810.1\|866934_867360_+\|tail	phage tail protein	A0A1J0I2L5	Salmonella_phage	5.6e-43	60.9
WP_049601739.1\|867668_868310_+	hypothetical protein	NA	NA	NA	NA
WP_049601736.1\|868290_868509_+	hypothetical protein	NA	NA	NA	NA
WP_138774811.1\|868586_869159_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-64	68.9
WP_138774812.1\|869588_870008_+\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	9.8e-16	42.6
WP_138775201.1\|870050_870428_-\|tail	tail fiber assembly protein	NA	NA	NA	NA
WP_053100131.1\|870477_871848_-	hypothetical protein	F1BUP1	Erwinia_phage	3.6e-107	52.3
WP_138774813.1\|871844_872453_-\|tail	phage tail protein I	F1BUP2	Erwinia_phage	5.3e-87	73.6
WP_138774814.1\|872445_873354_-\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	3.2e-120	76.2
WP_138774815.1\|873350_873701_-\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	6.7e-26	53.6
WP_138774816.1\|873697_874345_-\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	2.2e-51	50.7
WP_138774817.1\|874453_875041_-	cell filamentation protein Fic	NA	NA	NA	NA
WP_138775202.1\|875037_875226_-	hypothetical protein	NA	NA	NA	NA
WP_138774818.1\|875319_875937_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	1.3e-37	42.0
WP_138774819.1\|875989_876451_-\|tail	phage tail protein	A0A0M4R2U5	Salmonella_phage	4.2e-36	50.0
WP_138774820.1\|876437_876662_-	hypothetical protein	Q7Y4E1	Escherichia_virus	1.7e-11	53.0
WP_138774821.1\|876549_876975_-\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	2.8e-18	43.0
WP_138774822.1\|876979_877375_-	M15 family metallopeptidase	A9DET4	Yersinia_phage	7.0e-48	71.0
WP_138774823.1\|877361_877748_-\|holin	holin	NA	NA	NA	NA
WP_138774824.1\|877785_877989_-\|tail	phage tail protein	E5G6M9	Salmonella_phage	1.1e-20	67.2
WP_138774825.1\|877989_878472_-\|head	head completion/stabilization protein	A0A0M4QWR7	Salmonella_phage	9.8e-36	51.2
WP_138774826.1\|879522_880563_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	2.0e-118	60.3
WP_138774827.1\|880595_881450_-\|capsid	GPO family capsid scaffolding protein	A0A1J0I2E9	Salmonella_phage	4.0e-56	50.9
WP_138774828.1\|881608_883327_+	oxidoreductase	A0A0M4S6K7	Salmonella_phage	3.2e-190	59.9
WP_138774829.1\|883329_884361_+\|portal	phage portal protein	A0A0M5M1H6	Salmonella_phage	3.0e-127	64.6
WP_138774830.1\|884390_884708_-	hypothetical protein	NA	NA	NA	NA
WP_138774831.1\|884934_886122_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_138774832.1\|886125_886920_+	hypothetical protein	NA	NA	NA	NA
WP_138774833.1\|889325_890138_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1S6L011	Salmonella_phage	1.8e-74	53.8
WP_138774834.1\|890134_890359_-	TraR/DksA family transcriptional regulator	Q6K1F5	Salmonella_virus	9.5e-18	58.1
WP_138774835.1\|890358_890586_-	DUF2732 family protein	A0A1S6L021	Salmonella_phage	9.3e-05	38.0
WP_049603001.1\|890659_890989_-	DUF5347 family protein	NA	NA	NA	NA
WP_049603000.1\|891013_891238_-	DUF2724 domain-containing protein	A0A0M4S6M9	Salmonella_phage	6.6e-11	48.5
WP_082153430.1\|891234_891423_-	hypothetical protein	NA	NA	NA	NA
WP_049602999.1\|891485_891857_-	hypothetical protein	Q1JS28	Enterobacteria_phage	5.0e-32	61.1
WP_049602998.1\|891966_892266_+	helix-turn-helix transcriptional regulator	Q1JS29	Enterobacteria_phage	9.4e-29	64.6
WP_049602997.1\|892332_893328_+\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	2.6e-131	67.7
893420:893438	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1501574 : 1561013

Shigella_phage(31.82%)

plate,tRNA,terminase,portal,protease,tail,head,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138774950.1\|1501574_1502507_+\|tRNA	tRNA dihydrouridine(16) synthase DusC	NA	NA	NA	NA
WP_138774951.1\|1502653_1503286_-	hypothetical protein	NA	NA	NA	NA
WP_005274383.1\|1503590_1503767_-	hypothetical protein	NA	NA	NA	NA
WP_032897931.1\|1504164_1505100_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
WP_054872758.1\|1505260_1506973_-	D-lactate dehydrogenase	NA	NA	NA	NA
WP_054872759.1\|1507322_1507862_+	class IV adenylate cyclase	NA	NA	NA	NA
WP_005189583.1\|1507918_1508260_-	HNH nuclease family protein	NA	NA	NA	NA
WP_005274392.1\|1508649_1509753_+	suppressor of fused domain protein	NA	NA	NA	NA
WP_005274394.1\|1509962_1510211_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_005274396.1\|1510392_1511229_+	phosphonate ABC transporter ATP-binding protein	W5SAS9	Pithovirus	9.1e-13	27.2
WP_138774952.1\|1511265_1512195_+	phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_072188500.1\|1512444_1513248_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_138774953.1\|1513247_1514153_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_005274408.1\|1514423_1514894_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	6.6e-37	50.0
WP_054872765.1\|1515259_1516528_+	urea ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_138774954.1\|1516612_1518214_+	urea ABC transporter permease subunit UrtB	NA	NA	NA	NA
WP_032897937.1\|1518213_1519290_+	urea ABC transporter permease subunit UrtC	NA	NA	NA	NA
WP_049601534.1\|1519286_1520123_+	urea ABC transporter ATP-binding protein UrtD	A0A1M7XV31	Cedratvirus	2.1e-09	26.1
WP_005274418.1\|1520211_1520910_+	urea ABC transporter ATP-binding subunit UrtE	A0A2H4PQG7	Staphylococcus_phage	1.3e-12	25.3
WP_138774955.1\|1520917_1521772_-	3-mercaptopyruvate sulfurtransferase	NA	NA	NA	NA
WP_145522864.1\|1522289_1522472_-	hypothetical protein	NA	NA	NA	NA
WP_138774957.1\|1522649_1523396_-	hypothetical protein	NA	NA	NA	NA
WP_138774958.1\|1523401_1524583_-	recombinase	A0A2D1GN00	Marinobacter_phage	2.7e-31	30.0
WP_050077941.1\|1524586_1524805_-	hypothetical protein	NA	NA	NA	NA
WP_138774959.1\|1524862_1525321_-	polyphosphate kinase	A0A2L0V121	Agrobacterium_phage	6.9e-07	58.7
WP_138774960.1\|1525304_1525934_-	methyltransferase domain-containing protein	A0A0N7IRF6	Acinetobacter_phage	1.5e-55	59.9
WP_138774961.1\|1525926_1526208_-	hypothetical protein	NA	NA	NA	NA
WP_138774962.1\|1526200_1526872_-	hypothetical protein	NA	NA	NA	NA
WP_138774963.1\|1527044_1527578_-	HD family hydrolase	Q8SBG0	Shigella_phage	4.1e-51	59.0
WP_138774964.1\|1527625_1527865_-	hypothetical protein	NA	NA	NA	NA
WP_077173678.1\|1527943_1528852_-	recombination-associated protein RdgC	A0A1W6JP69	Morganella_phage	5.0e-57	43.5
WP_099460466.1\|1529344_1529812_+	hypothetical protein	NA	NA	NA	NA
WP_138774965.1\|1530216_1530939_-	helix-turn-helix domain-containing protein	A0A0N7KZF6	Stx2-converting_phage	2.3e-25	36.6
WP_049602723.1\|1531012_1531261_+	hypothetical protein	H6WRX5	Salmonella_phage	1.5e-08	41.6
WP_050946212.1\|1531305_1531833_+	hypothetical protein	Q8SBF4	Shigella_phage	6.3e-12	30.3
WP_138774966.1\|1531998_1532199_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_138774967.1\|1532195_1533215_+	GntR family transcriptional regulator	U5P0A0	Shigella_phage	2.4e-31	72.8
WP_138774968.1\|1533207_1534095_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	1.5e-93	56.0
WP_138774969.1\|1534091_1535858_+	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	1.1e-220	58.4
WP_138775214.1\|1535881_1536526_+	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	4.9e-59	57.3
WP_138774970.1\|1536522_1537524_+	DUF968 domain-containing protein	S5FV02	Shigella_phage	2.5e-94	50.3
WP_138774971.1\|1537600_1538419_+	antitermination protein	F1C595	Cronobacter_phage	9.4e-55	41.7
WP_077294250.1\|1538757_1539804_+	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	1.1e-132	65.1
WP_138774972.1\|1539950_1540166_+	peptidoglycan-binding protein LysM	H9C183	Pectobacterium_phage	1.5e-12	54.0
WP_138774973.1\|1540165_1540696_+	glycoside hydrolase family protein	H9C184	Pectobacterium_phage	5.8e-74	73.1
WP_138774974.1\|1540688_1541210_+	DUF2514 family protein	Q7Y3V2	Yersinia_phage	2.9e-78	89.0
WP_138775215.1\|1541283_1541865_-	hypothetical protein	NA	NA	NA	NA
WP_138774975.1\|1541960_1542311_+	HNH endonuclease	A0A1W6JP27	Morganella_phage	1.2e-43	67.2
WP_138774976.1\|1542507_1542963_+\|terminase	P27 family phage terminase small subunit	A0A1J0GV10	Halomonas_phage	2.1e-24	52.9
WP_138774977.1\|1542965_1544696_+\|terminase	terminase large subunit	Q8W631	Enterobacteria_phage	1.7e-210	60.7
WP_138774978.1\|1544706_1544895_+	DUF2244 domain-containing protein	Q6UAX9	Klebsiella_phage	8.0e-10	58.2
WP_138774979.1\|1544894_1546124_+\|portal	phage portal protein	Q8W629	Enterobacteria_phage	1.0e-190	81.2
WP_049617365.1\|1546113_1546764_+\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	2.4e-101	81.9
WP_138774980.1\|1546779_1547988_+\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	9.0e-179	78.1
WP_145528839.1\|1548040_1548373_+	hypothetical protein	NA	NA	NA	NA
WP_138774982.1\|1548391_1548706_+\|head,tail	phage gp6-like head-tail connector protein	S5FKK6	Shigella_phage	3.3e-24	52.8
WP_138774983.1\|1548702_1549095_+\|head	phage head closure protein	NA	NA	NA	NA
WP_049603051.1\|1549094_1549613_+	hypothetical protein	M1FPE2	Enterobacteria_phage	1.7e-49	59.3
WP_049603052.1\|1549609_1550161_+	hypothetical protein	S5FM61	Shigella_phage	9.7e-56	55.4
WP_138774984.1\|1550167_1550374_+	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	1.9e-09	69.0
WP_138774985.1\|1550370_1551864_+\|tail	phage tail protein	A0A192Y7L1	Salmonella_phage	3.6e-185	68.5
WP_038277325.1\|1551864_1552221_+\|tail	tail protein	U5P076	Shigella_phage	9.1e-55	85.6
WP_050159698.1\|1552217_1552484_+\|tail	phage tail assembly protein	M1FPE4	Enterobacteria_phage	1.2e-24	63.5
WP_138775216.1\|1552450_1552636_+	hypothetical protein	NA	NA	NA	NA
WP_138774986.1\|1552625_1554455_+\|tail	phage tail tape measure protein	M1FQW0	Enterobacteria_phage	3.5e-174	60.5
WP_138774987.1\|1554465_1554972_+	hypothetical protein	NA	NA	NA	NA
WP_138774988.1\|1555036_1556341_+	DNA circularization protein	S5FUX4	Shigella_phage	1.2e-136	56.3
WP_138774989.1\|1556337_1557408_+\|plate	baseplate protein	U5P0H6	Shigella_phage	1.2e-131	64.3
WP_138774990.1\|1557407_1557974_+\|plate	phage baseplate assembly protein V	Q8HAB9	Salmonella_phage	1.4e-33	48.1
WP_138774991.1\|1557977_1558391_+	hypothetical protein	Q8HAB8	Salmonella_phage	4.6e-42	59.1
WP_138774992.1\|1558383_1559442_+\|plate	baseplate J/gp47 family protein	Q8SBG4	Shigella_phage	2.7e-131	62.2
WP_138774993.1\|1559432_1560014_+	DUF2313 domain-containing protein	O22003	Shigella_phage	2.5e-70	64.6
WP_138774994.1\|1560020_1561013_+	hypothetical protein	U5P0I1	Shigella_phage	8.8e-23	48.3

DBSCAN-SWA_4

1627357 : 1679369

Cronobacter_phage(28.57%)

integrase,portal,protease,transposase

attL 1627256:1627286|attR 1642390:1642420

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1627256:1627286	attL	NA	NA	NA	NA
WP_138775003.1\|1627357_1628407_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4S6G4	Salmonella_phage	2.5e-113	58.0
WP_138775004.1\|1628520_1629741_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_138775005.1\|1629819_1631556_-	AIPR family protein	NA	NA	NA	NA
WP_138775006.1\|1631580_1632147_-	phage repressor protein	F1BUN8	Cronobacter_phage	8.2e-34	38.3
WP_032819427.1\|1632280_1632508_+	hypothetical protein	NA	NA	NA	NA
WP_005276278.1\|1632540_1633044_+	hypothetical protein	F1BUN6	Cronobacter_phage	6.2e-41	52.5
WP_005276280.1\|1633056_1633260_+	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_005276282.1\|1633262_1633637_+	hypothetical protein	NA	NA	NA	NA
WP_138775007.1\|1633645_1634053_+	hypothetical protein	NA	NA	NA	NA
WP_138775008.1\|1634183_1636271_+	replication endonuclease	F1BUM9	Cronobacter_phage	4.3e-229	61.6
WP_005276288.1\|1636380_1636575_+	hypothetical protein	NA	NA	NA	NA
WP_054872917.1\|1636810_1637707_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.2e-72	51.9
WP_005276294.1\|1638251_1638437_+	hypothetical protein	NA	NA	NA	NA
WP_005276300.1\|1638981_1639938_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	6.1e-146	77.1
WP_032898266.1\|1640848_1641055_+	hypothetical protein	NA	NA	NA	NA
WP_032898267.1\|1641412_1642054_+	hypothetical protein	NA	NA	NA	NA
WP_032898268.1\|1642034_1642253_+	hypothetical protein	NA	NA	NA	NA
WP_032898269.1\|1642578_1644267_-	aspartate:alanine antiporter	NA	NA	NA	NA
1642390:1642420	attR	NA	NA	NA	NA
WP_004873700.1\|1644636_1644900_-	glutaredoxin, GrxA family	A0A2I7SAE2	Vibrio_phage	1.0e-26	70.5
WP_032898270.1\|1645207_1645516_+	YbjC family protein	NA	NA	NA	NA
WP_099460424.1\|1645536_1645629_+	hypothetical protein	NA	NA	NA	NA
WP_032898271.1\|1645635_1646121_+	YbjN domain-containing protein	NA	NA	NA	NA
WP_049601471.1\|1646523_1647633_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_138775009.1\|1647754_1648888_+	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	1.3e-30	34.9
WP_138775010.1\|1648938_1649904_+	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_032898273.1\|1649900_1650746_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_005276328.1\|1650910_1651381_+	YbjO family protein	NA	NA	NA	NA
WP_032898275.1\|1651473_1652610_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	1.4e-24	26.6
WP_005276333.1\|1652668_1653400_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_032899150.1\|1653950_1654619_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_005279817.1\|1654618_1655335_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_005279816.1\|1655346_1656078_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_049601639.1\|1656098_1656827_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.0e-28	36.4
WP_138775011.1\|1657116_1657662_-	chorismate mutase	NA	NA	NA	NA
WP_049601465.1\|1657772_1658348_-	lipoprotein	NA	NA	NA	NA
WP_049601462.1\|1658468_1659479_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_099460423.1\|1659819_1661310_-	DUF2867 domain-containing protein	NA	NA	NA	NA
WP_032898062.1\|1661306_1662326_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_138775012.1\|1662476_1663400_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_054872790.1\|1663880_1665602_-	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
WP_072188381.1\|1665762_1666803_-	NADH oxidoreductase	NA	NA	NA	NA
WP_005275056.1\|1666930_1668583_-	hydroxylamine reductase	NA	NA	NA	NA
WP_005275057.1\|1668800_1669700_-	lysine exporter LysO family protein	NA	NA	NA	NA
WP_054872792.1\|1669932_1671597_+	ATP-dependent endonuclease	NA	NA	NA	NA
WP_138775013.1\|1671607_1672567_-	DUF535 family protein	NA	NA	NA	NA
WP_080375762.1\|1672772_1673888_+	macrolide transporter subunit MacA	NA	NA	NA	NA
WP_057646923.1\|1673887_1675837_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	5.2e-35	38.1
WP_005275069.1\|1676077_1676335_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.2e-16	61.2
WP_004873731.1\|1676746_1677067_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	3.1e-14	45.7
WP_005275070.1\|1677092_1679369_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.0

DBSCAN-SWA_5

2376304 : 2497745

137

Pectobacterium_phage(46.27%)

coat,plate,tRNA,terminase,integrase,protease,tail,head,transposase

attL 2464849:2464862|attR 2501852:2501865

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049601714.1\|2376304_2376655_+\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	6.7e-26	53.6
WP_138775128.1\|2376651_2377908_+\|tail	phage tail protein I	F1BUP3	Erwinia_phage	1.1e-91	76.2
WP_071984950.1\|2378250_2378676_+	hypothetical protein	NA	NA	NA	NA
WP_032898773.1\|2379381_2379696_+	hypothetical protein	NA	NA	NA	NA
WP_099460565.1\|2379692_2380511_-	DUF4225 domain-containing protein	NA	NA	NA	NA
WP_138775129.1\|2380624_2381068_-\|tail	phage tail protein	A0A1J0I2L5	Salmonella_phage	3.4e-43	60.9
WP_138775130.1\|2381070_2381718_-	hypothetical protein	NA	NA	NA	NA
WP_032896990.1\|2381811_2382051_+	hypothetical protein	A0A2I8TV89	Erwinia_phage	1.7e-09	50.0
WP_032896992.1\|2382307_2382604_+	TM2 domain-containing protein	M4ZS56	Bacillus_phage	6.2e-17	70.3
WP_004875238.1\|2382826_2383123_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	4.2e-13	40.0
WP_138775131.1\|2383127_2385515_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	4.3e-07	25.8
WP_005272321.1\|2385529_2386513_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	5.8e-35	38.5
WP_004706556.1\|2386838_2387195_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_004713020.1\|2387232_2387430_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_011816226.1\|2387526_2388078_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.4e-16	33.7
WP_049602842.1\|2388081_2390010_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.9e-128	37.4
WP_005161573.1\|2390331_2390544_+	KTSC domain-containing protein	A0A0K1LMB5	Caulobacter_phage	9.9e-09	42.0
WP_005272323.1\|2390660_2391374_-	DUF554 domain-containing protein	NA	NA	NA	NA
WP_072083918.1\|2391660_2391915_+	hypothetical protein	NA	NA	NA	NA
WP_032897051.1\|2392004_2392184_+	hypothetical protein	NA	NA	NA	NA
WP_005272329.1\|2392254_2392497_-	hypothetical protein	NA	NA	NA	NA
WP_086018773.1\|2392560_2392875_-	hypothetical protein	NA	NA	NA	NA
WP_005272344.1\|2393142_2393826_+	MarC family NAAT transporter	NA	NA	NA	NA
WP_005272347.1\|2393951_2394614_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_032897001.1\|2394825_2395794_+	iron/manganese ABC transporter substrate-binding protein YfeA	NA	NA	NA	NA
WP_032897003.1\|2395790_2396681_+	iron/manganese ABC transporter ATP-binding protein YfeB	A0A1V0SKJ1	Klosneuvirus	1.9e-08	26.6
WP_005272352.1\|2396680_2397565_+	iron/manganese ABC transporter permease subunit YfeC	NA	NA	NA	NA
WP_138775132.1\|2397561_2398470_+	iron/manganese ABC transporter permease subunit YfeD	NA	NA	NA	NA
WP_005272356.1\|2398808_2399678_+	fructosamine kinase family protein	NA	NA	NA	NA
WP_005272359.1\|2399872_2400427_-	yfeABCD regulator yfeE	NA	NA	NA	NA
WP_005272362.1\|2400615_2401281_+	hexitol phosphatase HxpB	NA	NA	NA	NA
WP_032814453.1\|2401364_2401697_-	cupin domain-containing protein	NA	NA	NA	NA
WP_004875262.1\|2402119_2402881_+	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	Q06VL0	Trichoplusia_ni_ascovirus	6.3e-21	34.1
WP_005272370.1\|2403208_2404876_+	pectate disaccharide-lyase	NA	NA	NA	NA
WP_004875265.1\|2404916_2405807_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_049602845.1\|2405799_2406720_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_005272380.1\|2406733_2407861_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.0e-11	27.5
WP_004875268.1\|2407876_2409166_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_005272382.1\|2409478_2410177_+	porin	NA	NA	NA	NA
WP_005272385.1\|2410466_2411015_+	metal-dependent hydrolase	A0A127AVX7	Bacillus_phage	9.8e-08	34.8
WP_138775133.1\|2411226_2412624_+	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA
WP_032897055.1\|2412682_2413525_-	N-acetylmuramoyl-L-alanine amidase	A0A1W6DX33	Sphingobium_phage	1.1e-10	29.3
WP_005272392.1\|2413927_2414719_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_005272394.1\|2414905_2416072_-	oligogalacturonate lyase	NA	NA	NA	NA
WP_138775134.1\|2416359_2417727_+	MFS transporter	NA	NA	NA	NA
WP_005272400.1\|2417845_2418727_-\|protease	protease HtpX	NA	NA	NA	NA
WP_138775135.1\|2419052_2421119_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	5.6e-88	35.3
WP_005272404.1\|2421138_2421852_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_138775136.1\|2421947_2422445_-	GAF domain-containing protein	NA	NA	NA	NA
WP_005272409.1\|2422669_2423917_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_138775137.1\|2423885_2426516_+	MCE family protein	NA	NA	NA	NA
WP_049602852.1\|2426512_2427445_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_138775138.1\|2427567_2429001_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	7.7e-20	24.8
WP_005272417.1\|2429309_2429864_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_032897057.1\|2429869_2430424_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_032897021.1\|2430436_2431000_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_049602854.1\|2431053_2431803_+	molecular chaperone	NA	NA	NA	NA
WP_138775139.1\|2431889_2434331_+	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_138775140.1\|2434350_2435358_+	fimbrial major subunit CsuA/B family protein	NA	NA	NA	NA
WP_032897025.1\|2435572_2437282_+	diguanylate cyclase	NA	NA	NA	NA
WP_005272435.1\|2437396_2437639_+	YebV family protein	NA	NA	NA	NA
WP_005272437.1\|2437750_2438140_-	ASCH domain-containing protein	NA	NA	NA	NA
WP_005272441.1\|2438857_2439091_-	hypothetical protein	NA	NA	NA	NA
WP_138775141.1\|2439311_2439947_-	glutathione transferase	NA	NA	NA	NA
WP_005272443.1\|2440122_2440371_-	hypothetical protein	NA	NA	NA	NA
WP_032897026.1\|2440570_2440765_+	hypothetical protein	NA	NA	NA	NA
WP_032897059.1\|2440869_2441568_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	1.1e-08	30.1
WP_005272448.1\|2441577_2442117_-	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_032897061.1\|2442605_2443625_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_005272455.1\|2443584_2444640_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_032897027.1\|2445131_2445656_+	hypothetical protein	NA	NA	NA	NA
WP_049602858.1\|2445777_2446596_-	oxidoreductase	NA	NA	NA	NA
WP_138775142.1\|2446726_2447509_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_138775143.1\|2447778_2448339_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_005272469.1\|2449066_2449636_-	DUF2239 family protein	NA	NA	NA	NA
WP_138775144.1\|2450544_2452509_+	acyltransferase family protein	A0A1R3Y5Q6	Salmonella_virus	3.0e-67	30.5
WP_138775145.1\|2452663_2453284_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.4e-34	43.6
WP_138775227.1\|2453283_2453937_-\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	7.8e-44	51.1
WP_019079691.1\|2454565_2455210_-	DUF2612 domain-containing protein	H9C1B4	Pectobacterium_phage	5.0e-43	49.0
WP_138775146.1\|2455202_2456402_-\|plate	phage baseplate protein	H9C1B3	Pectobacterium_phage	1.3e-148	66.8
WP_049603932.1\|2456401_2456752_-	hypothetical protein	H9C1B2	Pectobacterium_phage	8.4e-37	64.7
WP_138775228.1\|2456824_2457502_-	hypothetical protein	H9C1B1	Pectobacterium_phage	8.0e-68	57.1
WP_050535631.1\|2457509_2458403_-	hypothetical protein	H9C1B0	Pectobacterium_phage	6.0e-79	46.8
WP_138775147.1\|2458395_2458686_-	hypothetical protein	H9C1A9	Pectobacterium_phage	4.7e-25	59.6
WP_019079697.1\|2458685_2459354_-	hypothetical protein	H9C1A8	Pectobacterium_phage	6.7e-35	48.9
WP_138775148.1\|2459353_2461042_-	lysozyme	H9C1A7	Pectobacterium_phage	7.2e-118	47.6
WP_138775149.1\|2461154_2463191_-	ATP-binding protein	NA	NA	NA	NA
WP_138775004.1\|2463310_2464531_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_138775151.1\|2464818_2465211_-	hypothetical protein	H9C1A4	Pectobacterium_phage	3.3e-34	57.7
2464849:2464862	attL	NA	NA	NA	NA
WP_138775152.1\|2465213_2465618_-	hypothetical protein	H9C1A3	Pectobacterium_phage	2.7e-55	80.6
WP_138775153.1\|2465624_2466782_-	DUF3383 family protein	H9C1A2	Pectobacterium_phage	4.0e-168	75.3
WP_138775154.1\|2466765_2467326_-	hypothetical protein	H9C1A1	Pectobacterium_phage	9.9e-56	62.9
WP_138775155.1\|2467325_2467745_-	hypothetical protein	H9C1A0	Pectobacterium_phage	2.9e-60	75.0
WP_138775156.1\|2467747_2468215_-	hypothetical protein	H9C199	Pectobacterium_phage	4.4e-65	80.0
WP_138775157.1\|2468211_2468619_-	DUF4054 domain-containing protein	H9C198	Pectobacterium_phage	2.0e-50	74.3
WP_138775158.1\|2468643_2469024_-	hypothetical protein	H9C197	Pectobacterium_phage	4.9e-14	39.2
WP_138775159.1\|2469026_2469962_-	DUF2184 domain-containing protein	H9C196	Pectobacterium_phage	3.1e-147	82.6
WP_138775160.1\|2469980_2470517_-	hypothetical protein	H9C195	Pectobacterium_phage	1.4e-51	66.5
WP_138775161.1\|2470516_2471716_-	DUF2213 domain-containing protein	H9C194	Pectobacterium_phage	1.1e-123	71.7
WP_138775229.1\|2471727_2472477_-\|head	phage head morphogenesis protein	H9C193	Pectobacterium_phage	1.2e-104	75.9
WP_138775162.1\|2472535_2473921_-	DUF1073 domain-containing protein	H9C192	Pectobacterium_phage	1.9e-188	69.7
WP_138775163.1\|2473923_2475567_-\|terminase	phage terminase large subunit	H9C191	Pectobacterium_phage	3.7e-292	85.0
WP_054872663.1\|2475693_2475933_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	A0A2H4JBG1	uncultured_Caudovirales_phage	6.8e-22	63.3
WP_012105238.1\|2475922_2476207_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	6.4e-35	76.6
WP_054872664.1\|2476217_2477246_-\|terminase	terminase small subunit	I6X6R5	Burkholderia_virus	8.8e-42	43.4
WP_138775230.1\|2477249_2477510_-	hypothetical protein	NA	NA	NA	NA
WP_138775164.1\|2477512_2478127_-	protein Mom	C9E2P8	Enterococcus_phage	8.0e-67	62.1
WP_138775165.1\|2478123_2478633_-	ParB N-terminal domain-containing protein	A0A0R6PD10	Moraxella_phage	9.3e-37	50.6
WP_138775166.1\|2478999_2479740_-	serine/threonine-protein phosphatase	I6PCV8	Cronobacter_phage	3.9e-60	47.5
WP_138775167.1\|2479736_2480537_-	protein kinase	M1HD21	Acanthocystis_turfacea_Chlorella_virus	2.7e-06	31.0
WP_138775231.1\|2480666_2480861_-	hypothetical protein	NA	NA	NA	NA
WP_138775168.1\|2480895_2481228_-	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_138775232.1\|2481220_2481751_-	glycoside hydrolase family protein	Q7Y3V3	Yersinia_phage	2.5e-72	73.1
WP_019082932.1\|2481750_2481966_-	peptidoglycan-binding protein LysM	H9C183	Pectobacterium_phage	4.0e-13	55.6
WP_138775169.1\|2482289_2483357_+	nucleoid-associated protein	NA	NA	NA	NA
WP_138775170.1\|2483319_2484819_+	hypothetical protein	NA	NA	NA	NA
WP_138775233.1\|2484809_2485160_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	4.1e-44	70.8
WP_048615663.1\|2485201_2485486_-	DUF1364 domain-containing protein	H9C174	Pectobacterium_phage	6.1e-38	79.8
WP_138775171.1\|2485494_2486088_-	DUF1367 family protein	H9C173	Pectobacterium_phage	1.7e-61	57.9
WP_054872677.1\|2486162_2486345_-	hypothetical protein	NA	NA	NA	NA
WP_138775172.1\|2486499_2488650_-	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	1.0e-217	50.7
WP_138775173.1\|2488646_2489147_-	hypothetical protein	H9C166	Pectobacterium_phage	3.9e-19	43.8
WP_025378510.1\|2489161_2489569_-	replication protein	A0A0U2JGJ0	Escherichia_phage	1.4e-30	45.7
WP_138775174.1\|2489612_2490626_-	hypothetical protein	G9L6A8	Escherichia_phage	1.9e-41	55.5
WP_050135376.1\|2490638_2490827_-	hypothetical protein	NA	NA	NA	NA
WP_050291239.1\|2490819_2491071_-	hypothetical protein	NA	NA	NA	NA
WP_050291240.1\|2491084_2491525_-\|tRNA	tRNA-(guanine-N1)-methyltransferase	H9C162	Pectobacterium_phage	4.9e-34	55.6
WP_042546153.1\|2491565_2491763_-	transcriptional regulator	H9C161	Pectobacterium_phage	1.6e-08	47.5
WP_042546154.1\|2491845_2492238_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	5.0e-30	54.5
WP_138775175.1\|2492410_2492629_+	hypothetical protein	NA	NA	NA	NA
WP_100273932.1\|2492650_2492824_+	DUF1482 family protein	NA	NA	NA	NA
WP_138775176.1\|2492837_2493170_+	hypothetical protein	NA	NA	NA	NA
WP_050941904.1\|2493358_2493673_+	hypothetical protein	NA	NA	NA	NA
WP_138775177.1\|2493686_2495840_+	hypothetical protein	H9C157	Pectobacterium_phage	1.2e-101	36.2
WP_138775178.1\|2495836_2496349_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	2.0e-34	46.5
WP_050152217.1\|2496421_2496688_+	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	8.6e-10	42.9
WP_138775179.1\|2496662_2497745_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.0e-104	52.1
2501852:2501865	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2553985 : 2618425

Salmonella_phage(23.53%)

plate,terminase,integrase,portal,tail,head,transposase,capsid,lysis,holin

attL 2552136:2552149|attR 2564288:2564301

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2552136:2552149	attL	NA	NA	NA	NA
WP_138775242.1\|2553985_2555017_-\|integrase	tyrosine-type recombinase/integrase	Q1I119	Pasteurella_virus	1.3e-117	63.0
WP_138775004.1\|2555133_2556354_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_138775243.1\|2556661_2557231_-	Cro/Cl family transcriptional regulator	Q6K1G0	Salmonella_virus	1.8e-25	38.2
WP_019079169.1\|2557343_2557541_+	DNA-binding protein	Q1I116	Pasteurella_virus	2.8e-05	39.3
WP_099529434.1\|2557595_2558105_+	hypothetical protein	E5G6L3	Salmonella_phage	1.2e-44	52.4
WP_032909021.1\|2558114_2558300_+	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_138775244.1\|2558311_2558623_+	hypothetical protein	NA	NA	NA	NA
WP_138775245.1\|2558688_2558961_+	DUF2732 family protein	E5G6L6	Salmonella_phage	1.7e-05	46.7
WP_138775246.1\|2558960_2559266_+	DUF5405 family protein	NA	NA	NA	NA
WP_072092323.1\|2559374_2560280_+	hypothetical protein	A0A140XFY3	Salmonella_phage	4.2e-104	63.2
WP_138775247.1\|2560276_2562562_+	replication endonuclease	Q858T4	Yersinia_virus	1.4e-241	57.1
WP_138775248.1\|2563018_2563981_-	hypothetical protein	NA	NA	NA	NA
WP_138775954.1\|2564679_2564862_+	hypothetical protein	NA	NA	NA	NA
2564288:2564301	attR	NA	NA	NA	NA
WP_138775249.1\|2565226_2565505_-	hypothetical protein	NA	NA	NA	NA
WP_049611587.1\|2565617_2566655_-\|portal	phage portal protein	F1BUR7	Erwinia_phage	6.1e-160	78.2
WP_138775250.1\|2566651_2567416_-\|terminase	terminase	O80303	Escherichia_phage	1.6e-56	45.4
WP_138775251.1\|2567412_2569185_-\|terminase	terminase ATPase subunit family protein	F1BUR2	Erwinia_phage	8.5e-287	80.8
WP_138775252.1\|2569335_2570190_+\|capsid	GPO family capsid scaffolding protein	A0A218M4L9	Erwinia_phage	2.4e-93	61.8
WP_138775253.1\|2570266_2571487_+\|capsid	phage major capsid protein, P2 family	F1BUQ8	Erwinia_phage	5.2e-150	74.6
WP_138775254.1\|2571490_2572150_+	hypothetical protein	F1BUQ7	Erwinia_phage	1.9e-82	71.7
WP_050880712.1\|2572249_2572729_+\|head	head completion/stabilization protein	M1SNN6	Escherichia_phage	1.1e-42	59.4
WP_005163749.1\|2572728_2572932_+\|tail	tail protein X	E5G6M9	Salmonella_phage	1.0e-18	62.7
WP_005163750.1\|2572934_2573144_+	hypothetical protein	NA	NA	NA	NA
WP_138775255.1\|2573127_2573634_+	glycoside hydrolase family protein	A0A218M4K3	Erwinia_phage	6.8e-56	63.1
WP_138775256.1\|2573635_2574040_+\|lysis	LysB family phage lysis regulatory protein	F1BUQ1	Erwinia_phage	1.4e-27	52.6
WP_071826048.1\|2574011_2574209_+\|holin	holin	F1BUQ0	Erwinia_phage	8.9e-12	55.9
WP_138775257.1\|2574147_2574603_+\|tail	phage tail protein	F1BUP9	Erwinia_phage	1.3e-45	61.3
WP_138775258.1\|2574599_2575049_+	phage virion morphogenesis protein	O80313	Escherichia_phage	2.4e-44	64.4
WP_004705545.1\|2575594_2575912_+	helix-turn-helix transcriptional regulator	E5E3S9	Burkholderia_phage	1.6e-15	47.0
WP_042840570.1\|2575886_2576819_+	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_138775259.1\|2576919_2577561_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	7.3e-71	62.9
WP_138775260.1\|2577557_2577908_+\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	1.2e-38	68.1
WP_138775261.1\|2577912_2578821_+\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	1.6e-124	79.1
WP_005163764.1\|2578813_2579422_+\|tail	phage tail protein I	F1BUP2	Erwinia_phage	1.0e-90	79.1
WP_138775262.1\|2579418_2580573_+\|tail	phage tail protein	F1BUP1	Erwinia_phage	3.0e-107	57.1
WP_138775263.1\|2580574_2581057_+\|tail	phage tail protein	F1BUP0	Erwinia_phage	8.5e-40	50.6
WP_138775264.1\|2581183_2582353_+\|tail	phage tail sheath protein	F1BUU3	Erwinia_phage	1.5e-183	79.4
WP_138775265.1\|2582366_2582882_+\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	3.0e-67	72.5
WP_138775266.1\|2582937_2583249_+\|tail	phage tail assembly protein	F1BUU0	Erwinia_phage	7.7e-26	65.6
WP_004875948.1\|2583281_2583404_+\|tail	GpE family phage tail protein	Q858U8	Yersinia_virus	2.0e-09	71.1
WP_138775267.1\|2583396_2585826_+\|tail	phage tail tape measure protein	Q7Y4C8	Escherichia_virus	1.6e-150	45.0
WP_138775268.1\|2585828_2586314_+\|tail	phage tail protein	S4TUC3	Salmonella_phage	3.5e-49	60.4
WP_138775269.1\|2586310_2587477_+	phage late control D family protein	A0A0M5M5V5	Salmonella_phage	1.4e-149	67.8
WP_011192198.1\|2587568_2587784_+	DNA-binding transcriptional regulator	Q37973	Salmonella_virus	9.7e-20	62.5
WP_138775270.1\|2588270_2588513_+	DinI-like family protein	K7PKR6	Enterobacteria_phage	5.1e-25	72.7
WP_138775956.1\|2588556_2588772_+	DinI-like family protein	K7PM44	Enterobacteria_phage	5.2e-13	54.5
WP_138775271.1\|2588835_2589078_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	9.3e-19	55.7
WP_138775272.1\|2589434_2589869_+	hypothetical protein	NA	NA	NA	NA
WP_138775273.1\|2589907_2590420_+	hypothetical protein	NA	NA	NA	NA
WP_138775274.1\|2590438_2591026_+	hypothetical protein	NA	NA	NA	NA
WP_138775275.1\|2591260_2592079_+	DUF4225 domain-containing protein	NA	NA	NA	NA
WP_138775276.1\|2592056_2592386_-	hypothetical protein	NA	NA	NA	NA
WP_138775277.1\|2592627_2593251_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	9.1e-34	43.1
WP_138775278.1\|2594436_2595111_-	DUF2612 domain-containing protein	A9YX13	Burkholderia_phage	3.6e-52	48.4
WP_138775279.1\|2595110_2596298_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	2.8e-116	56.6
WP_004712483.1\|2596298_2596652_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.7e-43	73.5
WP_138775280.1\|2596648_2597392_-\|plate	phage baseplate protein	A0A0M5M1K7	Salmonella_phage	6.1e-77	58.6
WP_138775281.1\|2597452_2597800_-	hypothetical protein	A0A0M4RTY3	Salmonella_phage	3.9e-18	63.6
WP_138775282.1\|2597811_2598825_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	4.3e-126	62.1
WP_138775958.1\|2598878_2599070_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-08	41.7
WP_138775283.1\|2599183_2599765_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	1.3e-63	67.0
WP_138775284.1\|2599773_2601780_-	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	4.9e-238	63.0
WP_050079836.1\|2601766_2601958_-	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	7.1e-06	44.0
WP_138775285.1\|2601957_2602356_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	7.6e-34	60.6
WP_138775286.1\|2602366_2602807_-	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	5.2e-52	69.2
WP_138775287.1\|2602818_2604294_-	DUF3383 family protein	A0A0P0I492	Acinetobacter_phage	1.3e-144	53.7
WP_138775960.1\|2604296_2604680_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	9.5e-42	62.4
WP_138775288.1\|2604825_2605224_-\|head,tail	head-tail adaptor	A0A0M3ULK0	Salmonella_phage	3.9e-54	80.6
WP_138775289.1\|2605210_2605705_-	hypothetical protein	A0A2H4J488	uncultured_Caudovirales_phage	3.8e-51	64.7
WP_138775290.1\|2605701_2606106_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	1.9e-45	67.4
WP_138775291.1\|2606059_2606404_-	hypothetical protein	NA	NA	NA	NA
WP_138775292.1\|2606441_2607386_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	8.1e-135	72.3
WP_138775962.1\|2607398_2607869_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	2.3e-50	61.8
WP_138775293.1\|2607893_2609120_-	DUF2213 domain-containing protein	A0A2H4J159	uncultured_Caudovirales_phage	8.4e-108	52.6
WP_138775964.1\|2609123_2609717_-\|head	phage head morphogenesis protein	A0A2H4JI47	uncultured_Caudovirales_phage	2.7e-67	62.2
WP_138775294.1\|2609736_2611209_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.2e-178	61.2
WP_138775295.1\|2611208_2612825_-	TerL protein	A9YWZ6	Burkholderia_phage	5.3e-235	72.6
WP_138775296.1\|2613053_2614076_-\|terminase	terminase small subunit	A0A248SKT2	Klebsiella_phage	6.7e-42	41.2
WP_138775297.1\|2614234_2614582_+	hypothetical protein	NA	NA	NA	NA
WP_138775298.1\|2614616_2614829_-	hypothetical protein	NA	NA	NA	NA
WP_138775299.1\|2614821_2615154_-	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_049602734.1\|2615146_2615677_-	lysozyme	Q7Y3V3	Yersinia_phage	1.4e-72	72.6
WP_138775300.1\|2615676_2615892_-	peptidoglycan-binding protein LysM	H9C183	Pectobacterium_phage	1.5e-12	54.0
WP_138775301.1\|2615957_2616686_-	protein mom	A0A0C4UQZ7	Shigella_phage	7.5e-88	69.0
WP_138775302.1\|2616969_2617542_-	DUF1133 family protein	NA	NA	NA	NA
WP_138775303.1\|2617538_2617823_-	DUF1364 family protein	H9C174	Pectobacterium_phage	3.4e-36	76.6
WP_138775304.1\|2617831_2618425_-	DUF1367 family protein	H9C173	Pectobacterium_phage	4.9e-61	55.3

DBSCAN-SWA_7

2621548 : 2633025

Pectobacterium_phage(61.54%)

tRNA,integrase

attL 2631090:2631103|attR 2633978:2633991

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138775308.1\|2621548_2622922_-	replicative DNA helicase	Q8HA30	Enterobacteria_phage	6.3e-112	48.4
WP_138775309.1\|2622918_2623893_-	helix-turn-helix domain-containing protein	A0A1W6JP36	Morganella_phage	5.6e-38	62.5
WP_138775310.1\|2623895_2624120_-	hypothetical protein	H9C163	Pectobacterium_phage	1.4e-21	66.2
WP_138775311.1\|2624136_2624601_-\|tRNA	tRNA-(guanine-N1)-methyltransferase	H9C162	Pectobacterium_phage	1.8e-34	56.1
WP_138775312.1\|2624661_2624847_-	hypothetical protein	H9C161	Pectobacterium_phage	9.2e-19	68.9
WP_138775968.1\|2624951_2625602_+	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	5.6e-87	70.8
WP_054872105.1\|2625936_2627289_-	group II intron reverse transcriptase/maturase	H7BVN7	unidentified_phage	8.6e-13	25.2
WP_138775313.1\|2627852_2628188_+	hypothetical protein	NA	NA	NA	NA
WP_138775314.1\|2628210_2628459_+	hypothetical protein	A0A1B1W282	Salmonella_phage	1.8e-09	43.6
WP_138775315.1\|2628479_2630681_+	transcription termination factor	H9C157	Pectobacterium_phage	2.2e-167	44.1
WP_138775316.1\|2630677_2631178_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	8.2e-62	76.1
2631090:2631103	attL	NA	NA	NA	NA
WP_138775317.1\|2631618_2631825_+	hypothetical protein	H9C154	Pectobacterium_phage	5.7e-09	50.0
WP_050143264.1\|2631781_2632015_+	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	3.1e-11	50.0
WP_138775318.1\|2632014_2633025_+\|integrase	tyrosine-type recombinase/integrase	K7PLZ2	Enterobacterial_phage	3.5e-128	66.4
2633978:2633991	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3147903 : 3245492

106

Enterobacteria_phage(15.38%)

plate,tRNA,terminase,integrase,portal,protease,tail,head,capsid,holin

attL 3183980:3183997|attR 3226749:3226766

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032898956.1\|3147903_3149328_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_138775988.1\|3149594_3150650_+	AAA family ATPase	A0A0S0MVD6	Pseudomonas_phage	3.2e-47	45.1
WP_032898946.1\|3150646_3151120_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_004873307.1\|3151192_3152071_+	CNNM family magnesium/cobalt transport protein CorC	NA	NA	NA	NA
WP_138775392.1\|3152078_3153644_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA
WP_005279099.1\|3153782_3154367_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
WP_071984955.1\|3154646_3154838_+	hypothetical protein	NA	NA	NA	NA
WP_005279100.1\|3154937_3155867_+	glutamate/aspartate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004873312.1\|3156044_3156785_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_032898950.1\|3156784_3157459_+	glutamate/aspartate ABC transporter permease GltK	NA	NA	NA	NA
WP_004873313.1\|3157458_3158184_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.8e-26	35.0
WP_005279103.1\|3158237_3158720_-	zinc ribbon-containing protein	NA	NA	NA	NA
WP_054872453.1\|3159094_3161677_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	1.3e-187	42.7
WP_005279108.1\|3161691_3162315_+	LPS assembly lipoprotein LptE	NA	NA	NA	NA
WP_138775393.1\|3162311_3163346_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_049599505.1\|3163335_3163998_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
WP_004873320.1\|3164291_3164609_+	ribosome silencing factor	NA	NA	NA	NA
WP_005278057.1\|3164612_3165083_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_005278070.1\|3165175_3167071_+	peptidoglycan DD-transpeptidase MrdA	NA	NA	NA	NA
WP_005278071.1\|3167093_3168206_+	peptidoglycan glycosyltransferase MrdB	NA	NA	NA	NA
WP_032898663.1\|3168215_3169328_+	endolytic peptidoglycan transglycosylase RlpA	F5B3X9	Synechococcus_phage	9.9e-15	52.6
WP_032898665.1\|3169609_3170821_+	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	2.9e-105	51.3
WP_032898667.1\|3170950_3171214_+	YbeD family protein	NA	NA	NA	NA
WP_005278075.1\|3171365_3172052_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_005278076.1\|3172244_3173210_+	lipoyl synthase	NA	NA	NA	NA
WP_005278078.1\|3173406_3173628_-	twin-arginine translocase subunit TatE	NA	NA	NA	NA
WP_071984943.1\|3173831_3174884_+	diguanylate cyclase	G3MA91	Bacillus_virus	3.2e-15	30.0
WP_032898670.1\|3174941_3175325_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	1.9e-26	60.4
WP_002210315.1\|3175604_3175814_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	5.9e-22	78.1
WP_005278086.1\|3176080_3176560_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_074007306.1\|3176752_3177364_-	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_005278090.1\|3177718_3178684_+	membrane protein	NA	NA	NA	NA
WP_005278091.1\|3178764_3179409_-	serine/threonine protein phosphatase	K7P7V3	Enterobacteria_phage	7.8e-73	58.9
WP_005278093.1\|3179553_3179748_-	glycogen synthase	NA	NA	NA	NA
WP_005278095.1\|3180082_3180370_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_138775394.1\|3180390_3182163_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	1.4e-47	29.8
WP_049599525.1\|3182607_3183729_-	cupin domain-containing protein	NA	NA	NA	NA
3183980:3183997	attL	NA	NA	NA	NA
WP_138775395.1\|3184536_3186066_-	recombinase family protein	NA	NA	NA	NA
WP_071984944.1\|3186195_3186243_+	DinI-like family protein	NA	NA	NA	NA
WP_099462489.1\|3186666_3187572_+	hypothetical protein	A4KWU2	Enterobacteria_phage	3.7e-145	79.1
WP_138775396.1\|3188035_3188272_-	hypothetical protein	NA	NA	NA	NA
WP_099460537.1\|3188416_3189232_+	DUF4225 domain-containing protein	NA	NA	NA	NA
WP_032899220.1\|3189228_3189537_-	hypothetical protein	NA	NA	NA	NA
WP_049602796.1\|3190313_3190937_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.8e-35	44.8
WP_099460554.1\|3190936_3191971_-\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	2.6e-33	51.6
WP_138775397.1\|3192153_3192750_-	DUF2313 domain-containing protein	A0A2P9JZK7	Alteromonadaceae_phage	2.3e-34	38.8
WP_138775398.1\|3192746_3193883_-\|plate	baseplate J/gp47 family protein	J9QE72	Clostridium_phage	4.4e-10	28.6
WP_138775399.1\|3193886_3194324_-	hypothetical protein	A0A0C4UR04	Shigella_phage	1.8e-20	46.2
WP_138775400.1\|3194320_3194914_-\|plate	baseplate assembly protein	NA	NA	NA	NA
WP_032898843.1\|3194910_3195984_-\|tail	tail protein	M1PVV2	Vibrio_phage	1.2e-41	30.9
WP_138775402.1\|3195980_3197387_-	hypothetical protein	A0A192Y5U9	Salmonella_phage	1.3e-24	27.4
WP_005278834.1\|3197444_3199310_-	hypothetical protein	Q858G0	Salmonella_phage	1.1e-21	41.8
WP_005278837.1\|3199427_3199730_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_005278840.1\|3199731_3200106_-\|tail	phage tail protein	NA	NA	NA	NA
WP_138775404.1\|3200118_3201627_-\|tail	phage tail protein	B5TK67	Pseudomonas_phage	7.4e-106	45.4
WP_138775406.1\|3201626_3201818_-	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_138775408.1\|3201823_3202369_-	ATP-binding protein	NA	NA	NA	NA
WP_138775411.1\|3202365_3202710_-	hypothetical protein	NA	NA	NA	NA
WP_138775413.1\|3202709_3203204_-	hypothetical protein	NA	NA	NA	NA
WP_138775415.1\|3203205_3204252_-\|capsid	major capsid protein	Q6UYI3	Burkholderia_phage	8.3e-40	32.1
WP_138775416.1\|3204360_3204762_-\|head	head decoration protein	A0A067ZIL6	Vibrio_phage	1.3e-09	33.6
WP_138775418.1\|3204761_3205355_-	DNA primase	NA	NA	NA	NA
WP_138775420.1\|3205347_3206211_-	S49 family peptidase	K7P7A7	Enterobacteria_phage	3.0e-51	39.2
WP_138775990.1\|3206207_3207776_-\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	3.5e-98	38.3
WP_005278866.1\|3207844_3208108_-\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
WP_032898867.1\|3208116_3210093_-\|terminase	phage terminase large subunit family protein	G8EXZ6	Synechococcus_phage	3.1e-136	46.0
WP_005278871.1\|3210064_3210676_-	hypothetical protein	NA	NA	NA	NA
WP_049602778.1\|3210788_3211313_-	HNH endonuclease	A0A1W6DY33	Salmonella_phage	3.1e-35	50.0
WP_138775422.1\|3211389_3212034_-	hypothetical protein	NA	NA	NA	NA
WP_138775424.1\|3212443_3212860_-	hypothetical protein	NA	NA	NA	NA
WP_005277001.1\|3212870_3213371_-	hypothetical protein	Q7Y3V2	Yersinia_phage	5.3e-69	82.5
WP_005277004.1\|3213388_3213781_-	M15 family metallopeptidase	K0NZV5	Escherichia_virus	2.7e-36	65.1
WP_071984933.1\|3213767_3214154_-\|holin	holin	NA	NA	NA	NA
WP_032898469.1\|3214534_3214951_-	hypothetical protein	NA	NA	NA	NA
WP_005277008.1\|3215248_3215650_-	antitermination protein	S5M7R9	Escherichia_phage	4.9e-33	55.6
WP_032898485.1\|3215836_3216844_-	hypothetical protein	A0A1B5FPA6	Escherichia_phage	1.1e-68	50.5
WP_138775426.1\|3216951_3219627_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	2.6e-231	48.7
WP_099465994.1\|3219623_3220019_-	hypothetical protein	NA	NA	NA	NA
WP_138775428.1\|3220131_3220335_-	hypothetical protein	NA	NA	NA	NA
WP_138775430.1\|3220337_3220508_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_050096152.1\|3220485_3220683_-	hypothetical protein	NA	NA	NA	NA
WP_138775432.1\|3220675_3221476_-	ORF6N domain-containing protein	F1C5A3	Cronobacter_phage	5.2e-42	60.0
WP_050915401.1\|3221468_3221765_-	hypothetical protein	NA	NA	NA	NA
WP_138775434.1\|3221919_3222840_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_138775436.1\|3222842_3223463_-	hypothetical protein	A0A0P0J0J7	Acinetobacter_phage	6.5e-24	39.7
WP_138775438.1\|3223571_3223778_-	AlpA family phage regulatory protein	A0A1V0E8E5	Vibrio_phage	4.1e-07	45.3
WP_138775440.1\|3223922_3224981_-	hypothetical protein	NA	NA	NA	NA
WP_005182448.1\|3225396_3226584_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.3e-131	57.0
WP_005277034.1\|3227039_3227906_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	3.1e-32	34.3
3226749:3226766	attR	NA	NA	NA	NA
WP_005277036.1\|3227920_3228133_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_138775442.1\|3228277_3229663_-\|tRNA	cysteine--tRNA ligase	L7Y4R1	Megavirus	8.5e-40	32.1
WP_004873351.1\|3229947_3230442_+	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_005277039.1\|3230452_3231175_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_032898477.1\|3231369_3231894_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_032898478.1\|3231890_3232955_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_138775444.1\|3233011_3235444_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_005277049.1\|3235440_3236127_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.3e-32	34.2
WP_072188426.1\|3236094_3236733_+\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_005277053.1\|3236789_3237566_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_138775446.1\|3237854_3238709_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_138775448.1\|3238903_3239818_+	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_005277057.1\|3239820_3240270_+	NfeD family protein	NA	NA	NA	NA
WP_005277059.1\|3240390_3240810_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_138775450.1\|3241017_3243822_+	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	2.4e-110	36.2
WP_005277062.1\|3243908_3244727_+	hypothetical protein	NA	NA	NA	NA
WP_005277064.1\|3245012_3245492_+\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA	NA	NA	NA

DBSCAN-SWA_9

3312203 : 3383711

Salmonella_phage(20.0%)

coat,tRNA,terminase,portal,protease,tail,lysis,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004714578.1\|3312203_3313475_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.6e-130	55.8
WP_005272733.1\|3313702_3314326_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.3e-64	63.4
WP_005272735.1\|3314799_3316104_-	trigger factor	NA	NA	NA	NA
WP_072083849.1\|3316535_3316856_-	transcriptional regulator BolA	NA	NA	NA	NA
WP_032897209.1\|3317209_3317788_+	hypothetical protein	NA	NA	NA	NA
WP_138775489.1\|3317868_3319347_+	muropeptide MFS transporter AmpG	NA	NA	NA	NA
WP_005272741.1\|3319631_3320411_+	ion channel protein Tsx	NA	NA	NA	NA
WP_005272742.1\|3320772_3321729_+	cytochrome o ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_004873454.1\|3321733_3323725_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_032897215.1\|3323714_3324329_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
WP_032812973.1\|3324328_3324676_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
WP_086018778.1\|3324686_3325577_+	protoheme IX farnesyltransferase	NA	NA	NA	NA
WP_138775491.1\|3325842_3327213_+	MFS transporter	NA	NA	NA	NA
WP_032897217.1\|3327273_3327765_-	YajQ family cyclic di-GMP-binding protein	NA	NA	NA	NA
WP_138775492.1\|3327960_3328872_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_138775494.1\|3328834_3329425_+	protein deglycase YajL	NA	NA	NA	NA
WP_138775495.1\|3329517_3330969_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_005272755.1\|3331243_3331498_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_054872702.1\|3331503_3332424_+	(2E,6E)-farnesyl diphosphate synthase	NA	NA	NA	NA
WP_049602300.1\|3332551_3334411_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_049602297.1\|3334460_3334958_-	phosphatidylglycerophosphatase A	NA	NA	NA	NA
WP_032897224.1\|3334950_3335940_-	thiamine-phosphate kinase	NA	NA	NA	NA
WP_005272763.1\|3336009_3336426_-	transcription antitermination factor NusB	NA	NA	NA	NA
WP_005272766.1\|3336451_3336922_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	3.5e-30	47.7
WP_138775497.1\|3337056_3338166_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	8.0e-49	34.6
WP_004707531.1\|3338245_3338695_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_138775499.1\|3338788_3339988_-	hypothetical protein	NA	NA	NA	NA
WP_005272774.1\|3340352_3341321_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	7.2e-46	38.7
WP_138775501.1\|3341331_3343179_-	protein translocase subunit SecD	NA	NA	NA	NA
WP_005166605.1\|3343206_3343539_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	4.9e-10	33.3
WP_032897228.1\|3343728_3344853_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.0e-91	46.4
WP_138775503.1\|3345125_3346538_+	UbiA family prenyltransferase	NA	NA	NA	NA
WP_108087946.1\|3346537_3346876_+	EamA family transporter	NA	NA	NA	NA
WP_138775505.1\|3346886_3348482_+	hypothetical protein	NA	NA	NA	NA
WP_138775507.1\|3348482_3350420_-	hypothetical protein	Q716G1	Shigella_phage	1.0e-62	54.8
WP_138775509.1\|3350511_3352599_-	DNA transfer protein	A5VW64	Enterobacteria_phage	4.5e-194	58.3
WP_138775511.1\|3352598_3353897_-	acyltransferase	Q716G3	Shigella_phage	1.3e-106	53.3
WP_138775513.1\|3353896_3354553_-	DNA transfer protein	A0A2H4FUQ9	Salmonella_phage	4.3e-42	50.0
WP_138775515.1\|3354546_3355008_-	DUF2824 family protein	Q2A0B3	Sodalis_phage	3.0e-58	69.8
WP_138775516.1\|3355023_3355767_-\|tail	phage tail protein	A0A2D1GLK3	Escherichia_phage	6.5e-39	43.4
WP_138775518.1\|3355766_3357182_-	hypothetical protein	Q9AYZ4	Salmonella_phage	1.4e-202	71.8
WP_138775520.1\|3357153_3357651_-	recombinase RmuC	G8EYJ2	Enterobacteria_phage	4.0e-40	57.2
WP_138775522.1\|3357634_3357865_-	hypothetical protein	A0A2D1GLK1	Escherichia_phage	2.4e-16	71.4
WP_138775524.1\|3357905_3359189_-\|coat	coat protein	A0A2D1GLV2	Escherichia_phage	1.3e-164	67.1
WP_138775526.1\|3359188_3360097_-	scaffolding protein	G5DA98	Enterobacteria_phage	6.0e-119	75.2
WP_138775994.1\|3360110_3362276_-\|portal	portal protein	A0A2D1GLJ6	Escherichia_phage	1.7e-289	68.8
WP_138775528.1\|3362275_3363778_-\|terminase	terminase	I1TEI5	Salmonella_phage	1.1e-274	87.6
WP_138775530.1\|3363755_3364244_-	DNA-packaging protein	A0A192Y693	Salmonella_phage	9.5e-79	88.3
WP_049606326.1\|3364302_3364905_-	hypothetical protein	F8UBW3	Escherichia_phage	5.0e-05	43.2
WP_050296289.1\|3364922_3365159_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	3.8e-09	49.3
WP_138775532.1\|3365214_3365499_-	hypothetical protein	NA	NA	NA	NA
WP_138775534.1\|3365658_3366117_-\|lysis	lysis protein	A5LH84	Enterobacteria_phage	1.2e-22	43.6
WP_138775535.1\|3366113_3366503_-	M15 family metallopeptidase	A0A1P8DTR0	Salmonella_phage	5.1e-59	83.3
WP_049602198.1\|3366489_3366822_-\|holin	phage holin, lambda family	Q2A0C6	Sodalis_phage	1.1e-17	42.9
WP_138775536.1\|3367286_3367907_-	hypothetical protein	F1C5D0	Cronobacter_phage	5.4e-47	48.7
WP_138775537.1\|3367910_3368267_-	RusA family crossover junction endodeoxyribonuclease	E5AGG1	Erwinia_phage	7.2e-36	65.0
WP_042562425.1\|3368263_3368554_-	DUF1364 domain-containing protein	A0A220NQY2	Salmonella_phage	5.7e-39	76.8
WP_138775538.1\|3368755_3368926_-	NinE family protein	NA	NA	NA	NA
WP_138775540.1\|3369097_3369547_-	hypothetical protein	NA	NA	NA	NA
WP_038636037.1\|3369555_3370005_-	DUF1367 family protein	A0A0P0ZFW0	Escherichia_phage	3.4e-59	69.8
WP_138775542.1\|3370008_3370248_-	DUF4752 family protein	T1S9K2	Salmonella_phage	1.8e-19	61.3
WP_138775544.1\|3370438_3370888_-	DUF551 domain-containing protein	E7C9P2	Salmonella_phage	4.2e-17	37.3
WP_138775546.1\|3370884_3371277_-	hypothetical protein	NA	NA	NA	NA
WP_138775549.1\|3371273_3371558_-	hypothetical protein	A0A1P8DTI8	Proteus_phage	6.8e-05	42.9
WP_138775551.1\|3371541_3371856_-	DUF2591 family protein	NA	NA	NA	NA
WP_138775553.1\|3371901_3372138_-	hypothetical protein	A0A2P1CKR1	Pantoea_phage	7.2e-08	41.6
WP_138775555.1\|3372134_3372461_-	hypothetical protein	NA	NA	NA	NA
WP_046051406.1\|3372460_3373054_-	hypothetical protein	I3PUZ9	Vibrio_phage	1.3e-34	38.5
WP_138775557.1\|3374039_3374720_-	hypothetical protein	Q5QF30	Pseudomonas_virus	9.6e-37	41.0
WP_138775559.1\|3374744_3375083_-	hypothetical protein	NA	NA	NA	NA
WP_050130533.1\|3375233_3375461_-	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	6.7e-11	53.7
WP_050130532.1\|3375560_3376295_+	helix-turn-helix transcriptional regulator	A0A0N7C1P9	Escherichia_phage	3.5e-45	45.3
WP_138775561.1\|3376894_3377221_+	superinfection exclusion protein	Q76H37	Enterobacteria_phage	4.9e-39	78.9
WP_138775563.1\|3377225_3377702_+	hypothetical protein	A0A2H4J4Q4	uncultured_Caudovirales_phage	1.4e-39	55.8
WP_138775565.1\|3377751_3378069_+	hypothetical protein	A0A2I7RGU7	Vibrio_phage	5.3e-14	45.1
WP_049602130.1\|3378321_3378522_+	hypothetical protein	NA	NA	NA	NA
WP_049602126.1\|3378559_3378937_+	hypothetical protein	NA	NA	NA	NA
WP_138775567.1\|3379018_3380026_+	hypothetical protein	A0A2I7QQ55	Vibrio_phage	8.9e-15	36.6
WP_138775569.1\|3380041_3380170_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	NA	NA	NA	NA
WP_138775571.1\|3380279_3380528_+	hypothetical protein	NA	NA	NA	NA
WP_138775573.1\|3380499_3381180_+	AAA family ATPase	A0A2D1GLT5	Escherichia_phage	5.2e-91	69.9
WP_138775575.1\|3381176_3381773_+	DUF669 domain-containing protein	K7PHD7	Enterobacteria_phage	1.3e-42	51.1
WP_138775577.1\|3382224_3382815_+	hypothetical protein	NA	NA	NA	NA
WP_138774961.1\|3382807_3383089_+	hypothetical protein	NA	NA	NA	NA
WP_138774960.1\|3383081_3383711_+	methyltransferase domain-containing protein	A0A0N7IRF6	Acinetobacter_phage	1.5e-55	59.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage