CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP041754	Pseudomonas sp. KBS0707 chromosome, complete genome	3 crisprs	DEDDh,PD-DExK,csa3,DinG,WYL,cas3,RT	13
NZ_CP041756	Pseudomonas sp. KBS0707 plasmid unnamed2, complete sequence	0 crisprs	NA	0
NZ_CP041755	Pseudomonas sp. KBS0707 plasmid unnamed1, complete sequence	0 crisprs	NA	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041754_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041754_1

869277-869400

Orphan

Consensus_repeat	Method
GGCATGCCCACGCGGAGCATGGGCACGATGGTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041754_1

>merge|NZ_CP041754|1|869277-869400|CRISPRCasFinder
GGCATGCCCACGCGGAGCATGGGCACGATGGTGTTCTTGCGGACTGCGCTGCACAGGTCACTTCAAGAGAGGACGCAGGGCGCGCAGAAGGGCATGCCCACGCGAAGCATGGGCACGATGGTGT

>NZ_CP041754|1|1|869277-869400|CRISPRCasFinder
GGCATGCCCACGCGGAGCATGGGCACGATGGTGT	TCTTGCGGACTGCGCTGCACAGGTCACTTCAAGAGAGGACGCAGGGCGCGCAGAAG
GGCATGCCCACGCGAAGCATGGGCACGATGGTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041754.1\|WP_011167721.1\|873846_876009_+\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|273831
NZ_CP041754.1\|WP_002553206.1\|867354_867723_-\|response-regulator	unknown	unknown	gnl\|CDD\|381110
NZ_CP041754.1\|WP_007251656.1\|893390_893600_-\|DNA-gyrase-inhibitor-YacG	unknown	unknown	gnl\|CDD\|234754
NZ_CP041754.1\|WP_005745450.1\|859614_859812_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041754.1\|WP_003430735.1\|871475_872105_-\|DUF1780-domain-containing-protein	unknown	unknown	gnl\|CDD\|285845
NZ_CP041754.1\|WP_011167717.1\|867732_868947_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP041754.1\|WP_011167723.1\|877602_892926_+\|calcium-binding-hemolysin-protein	unknown	unknown	gnl\|CDD\|380205
NZ_CP041754.1\|WP_011167713.1\|861266_861800_-\|chemoreceptor-glutamine-deamidase-CheD	unknown	unknown	gnl\|CDD\|237400
NZ_CP041754.1\|WP_005732323.1\|867040_867331_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NZ_CP041754.1\|WP_011167722.1\|876001_877354_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP041754.1\|WP_011167715.1\|863205_864861_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP041754.1\|WP_011167725.1\|893596_894220_-\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP041754.1\|WP_011167720.1\|872293_873700_+\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|236529
NZ_CP041754.1\|WP_002553202.1\|862615_863155_-\|purine-binding-chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|223905
NZ_CP041754.1\|WP_080164415.1\|870824_870932_-\|DUF3094-family-protein	unknown	unknown	gnl\|CDD\|314274
NZ_CP041754.1\|WP_011167718.1\|869429_870728_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP041754.1\|WP_011167714.1\|861796_862606_-\|protein-glutamate-O-methyltransferase	unknown	unknown	gnl\|CDD\|214534
NZ_CP041754.1\|WP_054073006.1\|860227_861304_-\|chemotaxis-response-regulator-protein-glutamate-methylesterase	unknown	unknown	gnl\|CDD\|234828
NZ_CP041754.1\|WP_011167716.1\|864891_866994_-\|chemotaxis-protein-CheA	unknown	unknown	gnl\|CDD\|223716
NZ_CP041754.1\|WP_011167719.1\|870945_871479_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167

Protein	Function_ID	Function_description	E-value
NZ_CP041754.1\|WP_011167721.1\|873846_876009_+\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|273831	TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP041754.1\|WP_002553206.1\|867354_867723_-\|response-regulator	gnl\|CDD\|381110	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins. CheY family chemotaxis response regulators (RRs) comprise about 17% of bacterial RRs and almost half of all RRs in archaea. This subfamily contains Vibrio cholerae CheY4 and similar CheY family RRs. CheY proteins control bacterial motility and participate in signaling phosphorelays and in protein-protein interactions. CheY RRs contain only the REC domain with no output/effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.84955e-64
NZ_CP041754.1\|WP_007251656.1\|893390_893600_-\|DNA-gyrase-inhibitor-YacG	gnl\|CDD\|234754	PRK00418, PRK00418, DNA gyrase inhibitor YacG.	1.90464e-31
NZ_CP041754.1\|WP_011167714.1\|861796_862606_-\|protein-glutamate-O-methyltransferase	gnl\|CDD\|214534	smart00138, MeTrc, Methyltransferase, chemotaxis proteins. Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues.	2.20847e-89
NZ_CP041754.1\|WP_003430735.1\|871475_872105_-\|DUF1780-domain-containing-protein	gnl\|CDD\|285845	pfam08682, DUF1780, Putative endonuclease, protein of unknown function (DUF1780). This is a family of uncharacterized proteins. The structure of a hypothetical protein from Pseudomonas aeruginosa has shown it to adopt an alpha/beta fold, placing it in the Endonuclease superfamily/clan of restriction endonucleases.	5.14062e-127
NZ_CP041754.1\|WP_011167717.1\|867732_868947_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	3.78374e-21
NZ_CP041754.1\|WP_011167723.1\|877602_892926_+\|calcium-binding-hemolysin-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	4.03612e-24
NZ_CP041754.1\|WP_011167713.1\|861266_861800_-\|chemoreceptor-glutamine-deamidase-CheD	gnl\|CDD\|237400	PRK13498, PRK13498, chemoreceptor glutamine deamidase CheD; Provisional.	2.41273e-110
NZ_CP041754.1\|WP_005732323.1\|867040_867331_-\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	2.90088e-15
NZ_CP041754.1\|WP_011167722.1\|876001_877354_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	1.39439e-95
NZ_CP041754.1\|WP_011167715.1\|863205_864861_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	9.51915e-64
NZ_CP041754.1\|WP_011167725.1\|893596_894220_-\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	1.32283e-89
NZ_CP041754.1\|WP_011167720.1\|872293_873700_+\|TolC-family-outer-membrane-protein	gnl\|CDD\|236529	PRK09465, tolC, outer membrane channel protein; Reviewed.	3.81022e-94
NZ_CP041754.1\|WP_002553202.1\|862615_863155_-\|purine-binding-chemotaxis-protein-CheW	gnl\|CDD\|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	1.02793e-41
NZ_CP041754.1\|WP_080164415.1\|870824_870932_-\|DUF3094-family-protein	gnl\|CDD\|314274	pfam11293, DUF3094, Protein of unknown function (DUF3094). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.	0.0044386
NZ_CP041754.1\|WP_011167718.1\|869429_870728_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	4.59442e-150
NZ_CP041754.1\|WP_054073006.1\|860227_861304_-\|chemotaxis-response-regulator-protein-glutamate-methylesterase	gnl\|CDD\|234828	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB.	0
NZ_CP041754.1\|WP_011167716.1\|864891_866994_-\|chemotaxis-protein-CheA	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	0
NZ_CP041754.1\|WP_011167719.1\|870945_871479_-\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	6.80756e-28

>NZ_CP041754.1|WP_011167717.1|867732_868947_-|methyl-accepting-chemotaxis-protein
MSNHSSSTPAQSRPHFIWFSLIPVIPAVAWILTQSGTSTTNLLACAALLAIGLGACALAARTQQNDVRRAVAQALDHHQAHNAQTSTMASHAQLNEVFLGAMPIWAKQVESSRQQTETAIVELSSRFMGISERLQETVQASQHAAGELDGQNADGALKVLSQSDSELSQVIDSLKATQASRDQTLSQVRSLTAYTGELRTMAADVAAIAAQTNLLALNAAIEAARAGEAGRGFAVVADAVRSLSSKSSETGQQMSAKVDIINNAITQLVQAASSGADQDSHSVAASEQSIQNVLERFQSITGRLAESADLLKQESFGIRDEMTEVLVNLQFQDRVSQILAHVRDNIDSLHAHLLQASQSPDEAVAIDARQWLARMESTYATDEQRRTHRGESAAQQDSQEITFF
>NZ_CP041754.1|WP_002553206.1|867354_867723_-|response-regulator
MAKSVLVVDDSSSVRQVVGIALKSAGYDVIEACDGKDALGKLTGQKVHLIISDVNMPNMDGITFVKEVKKLASYKFTPIIMLTTESQESKKAEGQAAGAKAWVVKPFQPAQMLAAVSKLILP
>NZ_CP041754.1|WP_005732323.1|867040_867331_-|STAS-domain-containing-protein
MPTPDDNQADATRVQIDGELTIYTVTELAARLLPQITGAARVEVDLSQVTEMDGAGLQLLAVIQREAGKTGTSLRMTGQSKAVTETFELCNPGVVL
>NZ_CP041754.1|WP_011167716.1|864891_866994_-|chemotaxis-protein-CheA
MSINLDQAQQTFIVEARELLQAMEESLLQLESEPGDQDAIGAVFRAAHTIKGSAGLFGLTPIVSFTHIVEDVLDRLREGSVSVDAGLIAVLLKSGDHMLELIDVVASRGQTLQPPALEREAALRQALQVYQAPGNAQPADEARAPSVIDEQPAEVLWHISLRFGVDVFRNGMDPLSFLRYLNTLGQMVQVTTVTDSIPALEAWDPESCHLGFEIDFRSSAGHAAINEVFDFVREDCAVEITLMSETANHVEPTGTDLVSQTGQSPTVASGELLGDQRAVPRAPAAATAVERPSSASEQKNKDGRYVRVNADKLDELINLVGELVIASAGASLLAPSCDNDPLQEASSTVSGLVEQILDGALHLRMIPIGDTFNRFRRVVRDVSQELGKDIDLIINGAETELDKTVVEKIGDPLMHLLRNSMDHGIESAEARRAAGKPAKGHLSLNAYHDSGSIVIEIADDGAGLNRERILDKAQQRGLVAAGASLTDQEIYNLIFEPGFSTAEAVTNLSGRGVGMDVVKRNITLLRGTVDLDSQPGQGTIVRIRLPLTLAIINGFLVGIDQSTYVIPLDMVQECIELDEQNRHLTRDSGYLDLRGEVLPLVYLRDHFNHEGPAARRQNVVVVRYAEHKAGLVVDDLLGEFQTVIKPLGKLFGALRGISGSTILGSGAVALILDIPALLNQIVQMEARSTQAPQSLLPTSR
>NZ_CP041754.1|WP_011167715.1|863205_864861_-|HAMP-domain-containing-protein
MKWFYDLKISTKLITSFLVVLALTAAMGVFAIIQLGQVNQAAQDIKENWMPSMRAASGMRFYAANFRLKENRHIAADSAQEKAQMELEAAEARKQFETRLATYDKLIVSDQDRQMFSAVSASWSAYLKVSDNLFALSRQGQEAEARALLRGESKLHFDEVTNQLQKMVELNDAGATAAGDKGTSLYESARISIIAVLVAALLVGLGLALFIARIISRPLKEAATAAEQLAEGNLNAHIGHGSKDETGMVLNAMRNMVGKLSHIIGEVRNAADNLASASEEVSATAQSMSQATSEQAASVEETSASVEQMSASINQNTENAKVTDGMASKAAKEATDGGESVQQTVVAMKKIAQRISIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGELSSSSVEMAEKAGKLLDEMVPSINKTSDLVQEISAASEEQAAGVAQINTAMTQLNQVTQQNASSSEELAATAEEMSSQAEQLQQAMSFFTLDASPRAVAQGSPVDGRSNPNRQPPRPPQQAPRKAFAQSMAGAPDESEFTRF
>NZ_CP041754.1|WP_002553202.1|862615_863155_-|purine-binding-chemotaxis-protein-CheW
MGSLVTTRQTATAVEEEAQYLTFMLGGEMFAIGILGIKEIIEYGSLTVVPMMPAFVRGVINLRGAVVPVVDLSARFGRQNSDITRRSCVIIIEASSEDGQPQDIGLLVDNVSAVLEIPASQIEPPPNFGARIRADFISGMAKVDGKFVIVLEVDRVLSIDEMSSLAEASQSLPSDADAT
>NZ_CP041754.1|WP_011167714.1|861796_862606_-|protein-glutamate-O-methyltransferase
MPDTASLTDREFGQFQAWLYNAAGIKLTLAKKALVAGRLFKRLKHYELDNYGEYFKLIMNDQRNGELQVALDLLTTNETYFFREPKHFDFLRQQVLPKVTHGKMFRIWSAASSSGEEPYSLAMTLAEQLGTTPWEVVGSDISTRVLSKARSGHYPMERTETLPQPLLFKYCLKGIGRQEGTFLIDKSLRSRVSFVQVNLNDTLPDLGEFDVIFLRNVMIYFDQETKSKVVARLIPRLKPGGYFIISHSESLNGVNDMLKMVSPSIYRKP
>NZ_CP041754.1|WP_011167713.1|861266_861800_-|chemoreceptor-glutamine-deamidase-CheD
MNTPVGVAEIVLGPGEVVFQTRPTRLRTLLGSCVAITFWHPWRRIGGMCHFMLPGRIRRHQPLDGRYADEAMEILIRHALANGTLPEEYQVKLFGGGEMFPAHRHDPHMQNVADSNVHAALALAEQHRLKLMAQDLGSTGHRNIIFDLWNGNVWVRHQPMEAIEKDAKQKNQRIAGR
>NZ_CP041754.1|WP_054073006.1|860227_861304_-|chemotaxis-response-regulator-protein-glutamate-methylesterase
MPNKKISVLLVDDSAVVRQVLVAILNDTPDIHVMGAASDPIFAMAKLAQEWPDVIVLDVEMPRMDGITFLKKIMSERPTPVVICSSLTQKGAETSLQALSAGAVEIITKPTTGLKNFLIDSAAELVAAVRAAANSNVKNLGKRMAPPVLAPASKLTADAILPAASGHAMAQTTERIVAIGTSTGGTQALEAVLTALPRVCPGMVIVQHMPEKFTASFAERLNGLSQIEVREARNNDRILPGLALIAPGGKHMMVTRSGASYYVQVIDGPLVNRHRPSVDVLFRSVAKFAGKNATGIIMTGMGDDGARGLKEMLDAGSSTVAQDEASCVVFGMPKEAIKLNAAQRIMPLQEIHQAILHR
>NZ_CP041754.1|WP_005745450.1|859614_859812_-|hypothetical-protein
MRELNNEELAQIGGGMTVGEGVAAIGVVAAATALAPVTAVGAGVILVGVAGASAIDAFQTYQMAQ
>NZ_CP041754.1|WP_011167718.1|869429_870728_-|NAD(P)/FAD-dependent-oxidoreductase
MTHRIVIVGGGAGGLELATSLGKTLGKKGTASVTLVDANLTHIWKPLLHEVAAGSLNSYEDELNYVAQAKWNNFQFQLGRMTGLDRASRQIHLAETLDENGAELVPARSLGYDSLVIAVGSTTNDFGTTGAAEHCLFLDSRKQAERFHQQLLNHYLRAHAGQADSAQEITVAIVGAGATGVELAAELHNAAHELAAYGLGQIKPENLRITVIEAGPRVLPALPERIGAPVHKTLEKLGVTVLTNAAVSEVTADGLITASGQVIPASLKVWAAGIRAPAFLHELDGLESNRINQLQVLPTLQTTRDENIFAFGDCAACPQKGTDRNVPPRAQAAHQQASLLAKSLRLRIEGKTLPEYTYKDYGSLISLSSFSAVGNLMGNLMGSVMLEGWLARMFYVSLYRMHQMALYGTFRTLMLMLGSKIGKGTEPRMKLH
>NZ_CP041754.1|WP_080164415.1|870824_870932_-|DUF3094-family-protein
MSRHLNPEPQRCVEEYLQANRHPVERRPLLIPVLP
>NZ_CP041754.1|WP_011167719.1|870945_871479_-|MOSC-domain-containing-protein
MSPLQELLADVPQQGRVRWIGVRPESRAEMIELDAVEARREAGLTGDHSRPGPRNARQVTLIQWEHLAVVGSLLNRAADNPIVPQDLRRNLVISGINLFSLKNRRFRIGQAIFETTGWCQPCARLEQRLGRGTFQAVRGHGGITARVLQSSIIRLDDVLQVEPLEITDPWPPARQHA
>NZ_CP041754.1|WP_003430735.1|871475_872105_-|DUF1780-domain-containing-protein
MDDSDYLRLLTIQAEQANAFLSNARKWERERWVCQRLLQGLNIAHRNEDFTPATQEPPDVLFRDGRFEVFFVLDEGRRLNDEWREELARRRSAFSLSQLVRREAKPKRIPASELLHRLAPTLRKKSTNYRERGIDLGGLDIIAFASLKREVLDLNSHFPPPTEYLRQGWRSLSLVGPTFARVLFAHPGAPDFLRTNLGRSVVFDVGISL
>NZ_CP041754.1|WP_011167720.1|872293_873700_+|TolC-family-outer-membrane-protein
MNPFSPLVLVILTCACACGETVFAREQAKQHADLLSVYQAASLNDAQLSAARHAYNAQREAVPQARAGLLPNLTAGATSEVTRLERDEPSLSRERSGTTFRANLSQPLFRIDRWFQLKAAQSSVDQAELELSAKEQNLLLTAAQAYFETLRQLDAFAAAQAEEAALLRQRDQAQGRLDDGASSITDVYDAQAAYDNARANRQLVQRKVDDAYEALERLTKHSYTSIAGMRHQMPIEAPIPNDARAWVDIAVRQNLELQASERAVSAAEQTLSQRKAGHAPTIDAVASYRKGDNDSFGYSTPTDFGANGYRDNVAQSSIGIELNIPLYSGGMTSSQIKESTERLYQSQDEQEDRRREVVLNTRNAFRGINAGIEQIAARRQSIVSGQKSVEANQVGVDVGSRNIADVLNAQRQLYAAVRDYNDARYDYILDNLKLKQAAGTLSPDDLRALAAYLKQDYDPARDFLPPGV
>NZ_CP041754.1|WP_011167721.1|873846_876009_+|type-I-secretion-system-permease/ATPase
MNDSEMGAQTPDNVPRLDTGLASLVMLARFHQVAASPEQLAHEFGSPDQCLSQDSLLLAARKLGLKAKAAKTTAERLDRTPLPAIAADNNGGIFIIARLDQGKALIHDPLAQRPEVVTFEALQARWTGQLLLIRSEAGTPGESSSFDFTWFIPAIVKYRKLLGEVMLVSFVLQIFSLITPLFFQVVMDKVLVHHGLTTLDVIAIGLAGVMLFESALSGLRTYIFAHTASRIDVELGSKLFRHLITLPLSYFQARRVGDSVARVRELENIRNFLTGNAITLLLDVLFSVVFIAVMFYYSGWLTLIVLLSLPLYILVSVLITPVLRKRLNDSFARGAENQAFLVETVNGIDTLKSMAVEPQAIRKWDNQLAGYVAAGFKTQNLSTIANESVSLIGKLVTVATLWFGARLVIDGQLSVGQLIAFNMLAGRVAQPIMRLAQLWTNFQQTGVSVQRLGDILNTRNELSQVNRSALPPIKGRIEFDQVHFRYRPDGSEILRGINLVITPGQVIGVVGRSGSGKSTLTRLLQRLYVPERGRVLVDGMDLALADVSSLRRQIGVVLQDNMLFNRSIRENIALSDAGAPLEAVMQMAKLAGAHDFILELPEGYDTMVGEHGASLSGGQRQRIAIARALMGNPRILIFDEATSALDYESERIVQQNMQAICKGRTVIIIAHRLSAVRDANRIVVVDRGQIVEQGTHAELLTHQAGHYSRLHRLQQGGSHV
>NZ_CP041754.1|WP_011167722.1|876001_877354_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MSNAESSGLLQRYRRVWRQSWRQRREMDAPKRLAHEVQFLPAALELQDKPSHPAPRIFMWAIMAFAALALLWACLGKIYVVATASGKIIPSGKTKTIQSSETAVVKAIHVRDGQSVKAGQLLLELDSKSADADVGRVRSDLLAARIDSARAAAMLDAINQRKPPRDLTGTIVDADPMHVLAAERWLQGQYQEYRSSLDLVDAEIQQRQADIQAARIQVTSLQKTLPIATKLASDYENLLKKQYIARHAYLEKEQARLDLERQLSVQQASVLQSTAARQEAERRREGVVAQTRRAMLDLLQQADQKIASFNQDLTKARYQEDLTPAQPLMVLVPDGQPVEVEAMLENKDVGFVRAGQPVTVKVETFTFTKYGTIDGEVISVSNDAIEDEKRGLIYSSKIRLNSDTLNVNCVDIKLSPGMAVTAEVKTNKRRVIEYFLSPLQQHALESLRER
>NZ_CP041754.1|WP_011167723.1|877602_892926_+|calcium-binding-hemolysin-protein
MALSRGQKMAVGSFFNGVGQAKFVGAGAFFHVPATGYYIDPNNIGGWQYDPSTGGWWSHTPANLGDLPYPADPGTSAELERLRKIYEQHNNLEGLKPTDPVPNEDPLLTPGFIIKMLEKIYGETLEFKEKLKKKFGEAGETVSPIILDLNGDGVKTVGLDSDVHFDHDGNGFSELTGWVSQEDALLVYDRNNNNAIDDGGELFGSNYILDGAVVKNGFEALAEFDSNNDGVVDGKDEGFSKLKVWKDKSADAIVNDGELISLAEAGISSLSLQFRDDAYVDENGNQHRQLGSFVRADGVVGAMTDVWFQQDKADTEARNYLDVTHDVSVLPDLIGFGNVDDLHQAMMKDVSGNLKGLVERFSSEKNFSIRKDIVDQIILAWTGSDRYSADDRGGYALDARKIFAVEAFVGEGFIQGSGTNGGLRDPGPAASIELGNAFGMISDYYYSLLSLQTHYSKYTGQALVAPNSGDYVVDSSAIVQSLRADYDRGDISLEEISVYFKSLKDIGEYGARVLASVRQVGGGDGDFGLLIGLAGLSSNIGTSGADSLYSNSSSGSYLMGFGGGDSLYGGGGSDSLDGGSGNDYLNAGESSDIYRFSRGWGQDSINNYDVSSDKTDTIEFAADILPTDITVARSGYDLVLLLKSSTDKITVSNYFQNDGITPYALENIHFADGTTWTLNQLKTMALITTEGNDNVWGYATDDILSGSLGDDRLSGEAGDDTLLGEAGNDYLAGGEGNDTLLGNADNDTLYGDSGNDELDGGAGNDYLTGGDGSDVYRFSRGWGQDSISNYDSSAEKTDAIEFAPDILPADITVTRSNSELILSLKNSTDKITVAGYFQNDGITPYALEQIRFADGTTWNLDQIKALSILTTDGNDNVWGYASDDILKGGAGADSLSGEAGNDALFGEDGNDSLYGGVGADQLSGGEGGDYLTGGDGNDTLLGDAGNDTLYGDSGNDLLEGGTGNDYLIGGEGSDVYRFNRGWGQDSINNYDSSAGKTDAIEFAADILPVDIVVTRSYNDLVLSLKHSTDKVTISGYFQNDGDTPYTVEQIRFADGTHWNVEQIKSMAAFTFTDGNDALTGYASDDRIVGGMGDDVLSGLAGNDVVNGDEGSDTLYGGTGQDTLSGGSGSDYLYGEEGNDLLAGNAGSDILYGADGNDILDGGTGNDTLDGGRGSDIYRFAKGYGQDSINNNSYGETATDKVDAIQLDGLNSADLRFYRSSDDLVIQIKATGDTLTVRSHFSQDGVTAYAVDQLRFADGSVWGGAQIKAAVVQPSEEADTLTGYASADSLSGLDGNDSLSGRAGDDVLDGGNGADTLYGEDGNDTLLGRAGNDSLNGGYGDDVLDGGSGNDSLDGGYGSDTYVFRKGSGQDTISNGVYNEGTVGKQDVIRLEGLNLSDISLRREYSDLIIQIKETGDTLRVSSHFSPSSTYYNYAIDQLQFADGTVWGVDQIKASLLTGGEFNDTLTGYDTDDILEGLVGNDTLSGGLGNDTLRGGAGRDTLYGDDGADTLLGGADNDSLAGGNGDDVLDGGTGNDTLEGGKGSDTYIFAKGAGSDAIDNSSYNDITANKLDVVRLDGLNSEDVSLRRESDDLIVQVRQTGESLRIRSHFASDSGSWSYAIDQLKFADGTIWDRAHITAALLDGTDGNDTITGYDTADTLSGLAGNDTLNGRNGNDLLDGGDGKDSLNGEAGDDFLLGGAGNDTLSGGEGNDTLDGGTGNDSLEGGIGSDTYIFRKGSGQDIVYNYAYNESTPNKLDVVRLEGLTAEDVSIRRESDDLVIQIRQTGETLRVSSHFAVDQTYGYAINQLQFADGTVWDQAKITSALLIGTEGSDSIIGYATADELAGLEGDDVLNGRAGDDLLSGGEGRDTLNGEDGADTLLGGLGNDTLNGGAGNDTLDGGAGNDSLEGGKGSDTYIYRKGSGQDTISNYSYNDLTAHKLDVVRLEGLNTSDVSIRRESDDLLIQIRQTGETLRISSHFTVDQSYGYAINQLQFADGTLWDEAQITAALLIGTESDDSITGYASGDKLSGLVGNDILSGRGGDDVLDGGDGKDTLNGEDGNDTLLGGAGNDSLSGGIGNDVLDGGAGNDTLDGGKGSDTYVFGKGYGRDTISNYAYNDTTVDKLDVIRLEGLTSEDVSIQRESDDLVIQINQTGETLRVNSHFYADQSYGYAINQLQFANGIVWDQAQITAALLIGAESDDSITGYASDDRVSGGDGNDILSGRTGNDLLEGGRGKDTLNGEEGNDTLLGGAGNDTLNGGYGNDILDGGSGNDALDGGFGSDTYVFRRGAGQDTISNYAYNDTTVDKLDVIHLEGLNASDILMRRESDDLVIQIKGTDETLRVTSHFSASVIYGYGIDQVQFADGSILTNAQIKTALLTGTEVDESVVGYDSADRLLGLSGNDILYGRQGDDFLDGGDGKDTLYGEDGNDTLQGGAGNDTLSGGYGNDLLDGGNGNDSLDGGYGSDTYVFRKGSGQDIISNYAYNDTTVDKLDVIRLEGLNASDVVMRRESDDLVIQIKDSGETLRVGSHFYPYANYGYGIDQVQFADGTVLTSAQIKTALLTGTEVDESVVGYDSADRLLGLSGNDILYGRQGDDVLDGGDGKDTLYGEEGNDTLLGGSGYDTLSGGYGNDLLDGGSGNDSLDGGFGSDTYVFRKGSGQDSISNYAYNDTTVDKLDVIRLEGLNASDVVMRRESDDLVIQIKDSGETLRVGSHFYANATYGYGIDQVQFADGSVLTNAQIRTALLTGTEGDESISGYDSADNLLGLSGNDLLYGLQGDDTLKGGDGRDTLSGGDGNDTLDGGAGNDSLDGGYGSDTYVFRKGSGQDTINNYSYNDTTVGKLDVIRLEGLNASDVAMRRESDDLIIQIKDSGETLRVSSHFYPYANYGYGIDQVQFADGSVLTNAQIRSAMLSGSEGDDTVSGYDSADSLFGQSGNDVLSGRQGDDILDGGDGKDTLYGEDGDDTLLGGTSSDTLSGGYGNDLLDGGSGNDSLDGGFGSDTYVFRKGSGQDTISNYAYNDTTVGKLDVIRLEGLNVSDVVIRRESDDLVIQIKDSDETLRVSSHFYASAIYGYGIDQIQFADGVVWNKDDLNANLSTVVPVSSLTITGTEANETLTGGAGHDTLYGNGGDDILEGGAGNDRLDGGYGNDTYVFGKGSGQDTVLAYDPVSTRVDVVKLTGLNSSDVVITRESSDLLIRVKGATDTLRVSNHFINDSTYGYQINHIQFADGDVLSLAAINALVLQSSNADETLTGFASDDVIDGSGGDDTLNGAAGNDSLSGGTGSDTLNGEDGNDLLQGGSGNDVLNGGAGNDVLDGGAGNDRLDGGAGDDIYLFGKGSGQDVIYYANEARTGKVDTIQLVGLNAGDISISRAGYDLVLRVNGTTDSLRVVYHFLSDATSGYQIDRIQFADGNIWGQETIKSLALQGTDADQYLEGYGTDDLIEAGAGDDTVYGAAGNDKLFGNSGDDVVNGDDGDDLVQGGSGNDTLNGGAGNDVLDGGTGNDILNGGAGNDLLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYYANETRAGKVDTIQLVGLGAADISVSRDGSDLVIRVNGTTDSLRVVYHFAGDATSGYQIDRIQFADGSAWDQEAIKSQVLQGSDADQYLAGYATDDLIDGGAGDDTIVGGAGNDKLAGGAGADTLSGDEGNDLLQGGSGNDTLTGGAGDDVLDGAAGNDRLDGGAGDDTYLFGKGSGQDTLYYVNEARAGKVDTIQLVGLGVSDVSVSRDGYDLVVRVNGTTDTLRVMYHFMGDATSGYQIDRIQFADGNIWGQDTIKIQALLGNDADQYLAGYATDDLIDAGGGDDTINGAAGNDTLIGGSGADTLSGEEGNDLLQGGAGNDILNGGAGNDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYYANETRAGKVDQVKLVGLNAADVSVVREGYDLVIRINGTTDTLRVMYHFMSDATAGYQIDRIEFADGSNWDQSAIKAQVLTRSDAAQVLTGFASDDLIDGGADDDTLYGGAGQDRLLGGDGADSLNGDEGDDYLNGGAGNDSLAGGSGNDVLDGGAGNDRLDGGAGDDTYLFGKGSGQDTIYYANESRAGKVDQVKLVDLNAADVSVARDGYDLVIRILGTTDTLRVVYHFMGDATAGYQIDRIAFADGGFWDQTAIKAQVLQGTEADETLSGTGSDDVIYAAAGDDSVNGGSGNDTLSGGSGADTLNGEDGNDVLNGGDGKDSLYGGNGNDQLDGGAGNDMLDGGNGDDTYLFGKGSGQDSIYYAYEGRADKLDTVKLIDLNAADVSVRRDGNDLLIRVLGTTDSLRVVAHFTNDATYGYQVDRIQFADGNSWNQASIKSAVLQGTDADETLAGTAISDSIDAGAGDDTVNGGSGDDTLSGSKGADTLNGEAGDDLLLGGMGNDTLNGGLGNDILDGGAGNDRLDGGDGDDTYLFARGAGQDTVYYAYESRIGKLDTVKLTELNAVDVSVRRDGSDLLILVLGSTDSLRVMSHFTNDATYGYQIDRIQFADGSFWDQSAIKNQVLQGSDADETLSGTGGNDVIDAGAGDDVINGAAGNDTLTGNAGADTLNGGEGNDVLLGGAGNDSLSGGVGNDSLDGGAGNDQLDGGEGDDTYLFGKGAGQDTIYYAYENREGKLDTIKLTDLNASDVSVRRDGNDLIIRVLGSTDSLRVVYHFQSDAAGGYQIDRLVFADGSVWDQTQIKSQVLQGSDSDETLSGTSGNDVISAGAGDDTVNGGSGNDTLSGGAGADMLNGDAGNDLLQGGASNDTLYGGDGNDVLDGGAGNDQLNGGDGDDTYLFGKGAGQDTIYYANEARVGKLDTVKLADLNVSDVSITRDSSDLLIRVNGTTDNLRVMNHFAEDATSGYQIDQLQFADGTLWSQSTIKSQVLLGNSSDQTLRGYASDDVINAGDGDDTVSGGAGKDSLYGGKGIDMLYGEEGNDRLYGEAGNDTLYGGAGNDVLNGGTGNDSLAGGDGSDTYEFNIGSGRDVINNYDVSGGTDALQFGTDVSLEDLWFRRSGSDLEVSIIDTNDKVLVSNWYAANDYQVDQFKTADGKTLLDSQVQSLVDKMASFGIDAGAERNLTAAQQTQLDAVLAANWQ
>NZ_CP041754.1|WP_007251656.1|893390_893600_-|DNA-gyrase-inhibitor-YacG
MSQPMTVQCPTCDAPVEWSAASPSRPFCSERCKLIDLGAWASEEHAIPVSPDAEDEMFSGDLEAPHRGH
>NZ_CP041754.1|WP_011167725.1|893596_894220_-|dephospho-CoA-kinase
MTHPDQKPWILGLTGGIGSGKSAAAQCFTNLGIDTVDADHASRWVVEPGRPALEQIAAHFGKGLLQASGELDRGALRKLIFENPEQRRWLEALLHPLINQEIVSHLAKAKSPYAILVSPLLIESGQYRMVQRLLVIDTPAHLQIERTMLRDSSSQEQVEAILKVQIQREDRLRHADDVLVNDRDHAWLNSEVERLHHFYLTLRGGQS

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Crispr_ID: NZ_CP041754_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041754_2

2150193-2150314

Orphan

Consensus_repeat	Method
TGCGACGCAGAGCGTCGCAACCTGCATTCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041754_2

>merge|NZ_CP041754|2|2150193-2150314|CRISPRCasFinder
TGCGACGCAGAGCGTCGCAACCTGCATTCCCACGCTGGAGCGTGCGGAACGATAATCTCAACTATCGTGCCGATGCTCCGCGCGGCTATCGTGCGACGCAGAGCGTCGCGACCTGCATTCCC

>NZ_CP041754|2|2|2150193-2150314|CRISPRCasFinder
TGCGACGCAGAGCGTCGCAACCTGCATTCCC	ACGCTGGAGCGTGCGGAACGATAATCTCAACTATCGTGCCGATGCTCCGCGCGGCTATCG
TGCGACGCAGAGCGTCGCGACCTGCATTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041754.1\|WP_002552913.1\|2133479_2134016_-\|RNA-polymerase-factor-sigma-70	unknown	unknown	gnl\|CDD\|180803
NZ_CP041754.1\|WP_011168281.1\|2132882_2133407_+\|SgcJ/EcaC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|227212
NZ_CP041754.1\|WP_004664601.1\|2131504_2132689_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP041754.1\|WP_011168290.1\|2155318_2156545_-\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|225723
NZ_CP041754.1\|WP_004660170.1\|2149855_2150074_+\|MbtH-family-protein	unknown	unknown	gnl\|CDD\|225790
NZ_CP041754.1\|WP_002552911.1\|2130839_2131508_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP041754.1\|WP_004660192.1\|2154779_2155322_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041754.1\|WP_041924503.1\|2158234_2161645_+\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NZ_CP041754.1\|WP_004664615.1\|2154450_2154783_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041754.1\|WP_004664616.1\|2156841_2157819_+\|TauD/TfdA-family-dioxygenase	unknown	unknown	gnl\|CDD\|367137
NZ_CP041754.1\|WP_011168279.1\|2128506_2130843_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|274362
NZ_CP041754.1\|WP_041924771.1\|2148361_2149774_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|235892
NZ_CP041754.1\|WP_004664605.1\|2134332_2135091_+\|thioesterase	unknown	unknown	gnl\|CDD\|225749
NZ_CP041754.1\|WP_004664611.1\|2152158_2152923_-\|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224046
NZ_CP041754.1\|WP_011168289.1\|2153887_2154454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041754.1\|WP_004664597.1\|2128045_2128510_-\|response-regulator	unknown	unknown	gnl\|CDD\|381103
NZ_CP041754.1\|WP_004660181.1\|2152919_2153852_-\|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238499
NZ_CP041754.1\|WP_011168287.1\|2151259_2152159_-\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033
NZ_CP041754.1\|WP_041924502.1\|2150341_2151259_-\|zinc-ABC-transporter-solute-binding-protein	unknown	unknown	gnl\|CDD\|223874
NZ_CP041754.1\|WP_168203952.1\|2135184_2148198_+\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|235564

Protein	Function_ID	Function_description	E-value
NZ_CP041754.1\|WP_002552913.1\|2133479_2134016_-\|RNA-polymerase-factor-sigma-70	gnl\|CDD\|180803	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated.	6.60004e-104
NZ_CP041754.1\|WP_011168281.1\|2132882_2133407_+\|SgcJ/EcaC-family-oxidoreductase	gnl\|CDD\|227212	COG4875, COG4875, Uncharacterized protein conserved in bacteria with a cystatin-like fold [Function unknown].	7.36477e-53
NZ_CP041754.1\|WP_004664601.1\|2131504_2132689_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.54972e-45
NZ_CP041754.1\|WP_011168290.1\|2155318_2156545_-\|PepSY-domain-containing-protein	gnl\|CDD\|225723	COG3182, PiuB, Uncharacterized iron-regulated membrane protein [Function unknown].	5.10378e-73
NZ_CP041754.1\|WP_004660170.1\|2149855_2150074_+\|MbtH-family-protein	gnl\|CDD\|225790	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown].	8.24643e-34
NZ_CP041754.1\|WP_002552911.1\|2130839_2131508_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.28604e-66
NZ_CP041754.1\|WP_041924503.1\|2158234_2161645_+\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_CP041754.1\|WP_004664616.1\|2156841_2157819_+\|TauD/TfdA-family-dioxygenase	gnl\|CDD\|367137	pfam02668, TauD, Taurine catabolism dioxygenase TauD, TfdA family. This family consists of taurine catabolism dioxygenases of the TauD, TfdA family. TauD from E. coli is a alpha-ketoglutarate-dependent taurine dioxygenase. This enzyme catalyzes the oxygenolytic release of sulfite from taurine. TfdA from Burkholderia sp. is a 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase. TfdA from Alcaligenes eutrophus JMP134 is a 2,4-dichlorophenoxyacetate monooxygenase. Also included are gamma-Butyrobetaine hydroxylase enzymes EC:1.14.11.1.	2.96983e-34
NZ_CP041754.1\|WP_011168279.1\|2128506_2130843_-\|PAS-domain-S-box-protein	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	1.89724e-64
NZ_CP041754.1\|WP_041924771.1\|2148361_2149774_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|235892	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional.	0
NZ_CP041754.1\|WP_004664605.1\|2134332_2135091_+\|thioesterase	gnl\|CDD\|225749	COG3208, GrsT, Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	2.30569e-84
NZ_CP041754.1\|WP_004664611.1\|2152158_2152923_-\|metal-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	4.35067e-85
NZ_CP041754.1\|WP_004664597.1\|2128045_2128510_-\|response-regulator	gnl\|CDD\|381103	cd17551, REC_RpfG-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase response regulator RpfG and similar proteins. Cyclic di-GMP phosphodiesterase response regulator RpfG, together with sensory/regulatory protein RpfC, constitute a two-component system implicated in sensing and responding to the diffusible signal factor (DSF) that is essential for cell-cell signaling. RpfC is a hybrid sensor/histidine kinase that phosphorylates and activates RpfG, which degrades cyclic di-GMP to GMP, leading to the activation of Clp, a global transcriptional regulator that regulates a large set of genes in the DSF pathway. RpfG contains a CheY-like receiver domain attached to a histidine-aspartic acid-glycine-tyrosine-proline (HD-GYP) cyclic di-GMP phosphodiesterase domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	5.29814e-47
NZ_CP041754.1\|WP_004660181.1\|2152919_2153852_-\|zinc-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238499	cd01017, AdcA, Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).	1.85935e-117
NZ_CP041754.1\|WP_011168287.1\|2151259_2152159_-\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	5.8987e-50
NZ_CP041754.1\|WP_041924502.1\|2150341_2151259_-\|zinc-ABC-transporter-solute-binding-protein	gnl\|CDD\|223874	COG0803, LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism].	2.46498e-17
NZ_CP041754.1\|WP_168203952.1\|2135184_2148198_+\|non-ribosomal-peptide-synthetase	gnl\|CDD\|235564	PRK05691, PRK05691, peptide synthase; Validated.	0

>NZ_CP041754.1|WP_004660170.1|2149855_2150074_+|MbtH-family-protein
MTSVFDREDSVFQVVVNHEEQYSIWPDYKAIPNGWRTVGKSGFKKECLAYIEEVWTDMRPLSLRQKMEAQTA
>NZ_CP041754.1|WP_041924771.1|2148361_2149774_+|aspartate-aminotransferase-family-protein
MSVATRLIDDQLTRVAPAAAETLYQFEESPLLARQNRQESNARSYPRRIPLALKRAKGIHVEDVEGRRFIDCLAGAGTLALGHNHPVIIEAIQQVISDELPLHTLDLTTPVKDQFVQDLFGLLPQQLANDAKIQFCGPTGTDAVEAALKLVRTATGRSTVLSFQGGYHGMSQGALSLMGSLGPKKPLGALLGTGVQFLPYPYDYRCPFGLGGEQGVRANLHYLENLLNDPEAGVQLPAAVILEVVQGEGGVIPADLDWLRGVRRITEKAGVALIVDEIQSGFARTGKMFAFEHAGIIPDVVVMSKAIGGSLPLAVVVYRSWLDTWLPGAHAGTFRGNQMAMATGSAVMRYLQEHNICEHATAMGARLSRHLHALQRDFPQLGDIRGRGLMLGVELVDPAGVRDAQGHPPVFARLAPLVQRECLKRGLILELGGRHGSVVRFLPPLVITAEQVDEVAEIFGRALNAAVAQL
>NZ_CP041754.1|WP_168203952.1|2135184_2148198_+|non-ribosomal-peptide-synthetase
MMDAFELPDTLAQALQRRALHTPDRLALRFLTDEKDQGLVLTYRDLDLRARTIAAALQRQAVPGDRATLLFHSGPDYVAAFFGCLYAGVIAVPAYPPESNRRHHQERLLSIIADAEPRLVLTGSDLQPALLQMDELAAADAPQLLCVDTLDSASADNWQGPQLQADDIAFLQYTSGSTALPKGVQVSHGNLVANELLIRHGFGIDVNPDDVIVSWLPLYHDMGLIGGLLQPIFSGVPCILMAPAYFLTRPLRWLEAISEYGGTISGGPDFAYQLCSARVSDSALERLDLSRWRVAYSGSEPIREDSLNAFAEKFASCGFTPDSFMASYGLAEATLYVAGGKRGKGIPSLRLNAQALARNVAELGDGQPVMSCGTGQPGHGVLIADPATLQVLDENRIGEVWASGPSIAHGYWRNPEATAKAFVQHDGQTWLRTGDLGFQRHGELYITGRLKDMLIVRGHNLYPQDIEKVVEREVDVVRKGRIAAFAVNQDGSEGIGIAAEVSRSVQKILSAEALIKIIRQAVAEAFQEAPSVVVLLNPGALPKTSSGKLQRSACRTRLADGSLDSYAVFPANNTTHQNRTLSTGSDLQAQIASVWCEHLQCEQISADDHFFLLGGNSIVATQVVARLRETLGIDLNLRLLFEAPTLAAFAAQIEALQIAASQGDSQTQNAIVRLPGNEHLPQSLAQNRLWFLWQLDPQSSAYNIPGGLYLRGELDTTALRTSFQRLIERHESLRTRFYEHDGVALQRIDAPGEFHFDTLDISDLPSDERQTRALAIREEQARLPFDLQNGPLLRVTLLRLDEEEHQLLVTLHHIIADGWSLNVLIDEFSRLYASAVQGQPLELAPLPLRYADYGQWQREWLANGEAERQLDYWKQQLGDEQPTLELSTDRPRSAHQQHSASRYSLRLSAELSAAVRNTAQAWQSTSFMLLLAGFQALLHRYSGQTDIRIGVPGANRPRHETQGLIGFFINTLVLRAQLDPRLPFSTLLAQTRQAALDAQAHQDVPFEQLVEAFPQAREHGLFQVMFNHQQRDLGALRRLPGLLAEELPWHSREAKFDLQLHSEEDRNGRLNLSFDYADELFERDTIVRLARHYVQLLTQVSQQAQVALGDVQLLGADELSEQAQWSAAACTPAHVWLPEMLERQALQTPERIALVWEGGSLDFASLHAQANRLAHYLRDKGVGPDVKVAIAAERSPQLLIGLLAILKAGGAYVPLDPDYPIERLAYMLQDSGVELLLTQSHLLGDLPSADGVCTVAMDMLHLDSWPVSAPGLHLSGDNLAYVIYTSGSTGQPKGVGNTHAALVERLQWMQDTYGLDESDVLMQKAPISFDVSVWECFWPLITGCRLLLAGPGEHRDPHRIAQLVNEHGVTTLHFVPPLLQLFVDEPLAQQCTSLRRLFSGGEALPSELRNRVLEHLPGVQLHNRYGPTETAINVTHWQCQVSDGLRSPIGRPLGNVLCRVLDSELNPLPRGVAGELCIGGIGLARGYLNRPGLTAERFVADPLGQPGERLYRTGDLVRWAADGALEYLGRLDQQVKLRGFRVEPQEIEARLLTQPGVGHAAVLVRETAAGPQLIGYYTAEAGQDAQAERIKSALALELPDYMVPAQLVRLDSMPLSPIGKLDRRALPEPQWQTREHVEPQTDLQKQIAAVWRQVLGVPRVGLRDDFFELGGHSLLATQIISRVRQACDIDLPLRALFEASELGAFVEQVQTIQLSGERSSLQPIARVDRSQPVPLSYSQQRMWFLWQMEPDSPAYNVGGMARLNGVLDIERFEAALQALILRHETLRTTFPSVNGVACQKVSEQTGLRVQWQDYSALPAELRQQRLQALADSEAHQPFDLETGPLLRACLVKAADLEHYFVLTLHHIVTEGWAMDIFARELGLLYEAFLQGKPSPLEPLAVQYLDYSVWQRQWMEAGERQRQLDYWTAQLGNEHPLLELPADRPRPAVQSHQGELYRFDLNPELAAKVRAFNARNGLTLFMTMTATLAVLLYRYSGQNDLRIGAPVANRIRPESEGLIGAFLNTQVLRVQLDGQMSVAQLFEQVRHTVIEGQSHQDLPFDHLVEALQPPRSAAYNPLFQVMCNVQRWEFQQSRELAGMTVDYLVNDARATKFDLNLEVTELDHRLGCCLTYSTDLFDEPRIAQMAEHWLNLLQALLADPQQRLSELPLLQDAERQQLLDSLGVEAGEQRLDQCIHSLFAEQARLRADAPALTFAGETLSYAELDGRANQLAGMLRQRGVGPQVRVGLALPRSLDMVVGLLAILKAGGAYVPLDPEYPLERLHYMIEDSGVGLLLSDRALFAALGELPAGVARWCLEDDQPLLASFSTDELPFISLPQHQAYLIYTSGSTGKPKGVVVSHGEIAMHCQAVIRRFDMQPDDCELHFYSINFDAATERLLVPLLSGARVVLRAQGQWDAEEICTLIRQQQVNILGFTPSYGSQLAQWLATQGQTLPVRMCITGGEALTGEHLQRIRAVFQPELLFNAYGPTETVVMPLASLAPQQLEEGEASVPIGRVVGARVAYILDADLALVPQGASGELYIGGAGLAQGYHQRPGMSAERFVADPFASNGGRLYRTGDLVRQRADGLVEYLGRIDHQVKIRGFRIELGEIETRLLEHEAIREAVVLALDTPSGKQLAGYLVSDVAGQGDEQQAQLRESLKSHLKAQLPDYMVPTHLILLDSMPLTANGKLDRRALPAPDPELNRQHYVAPASELEQQLAAIWCAVLNVEKVGLNDNFFELGGDSILSIQVVSRSRQVGIHFSPRDLFQHQTVQTLAAVATASELIQAEQGLLQGASALTPIQHWFFDTPIPERQHWNQSLVLEPLTALDPRLLEQALRALLEQHDALRLSFTGQNGKWQAEHRAVTAETLLIQAQVADMAECAALYADTQRSLDLQNGPLLRALLVDGPQGQQRLLMVIHHLVVDGVSWRVLLDDLQTAYRQLSEATPVRFAAKTSAFRDWAARLQAYAGNESLREELHVWQRQLGGPLAQLPCHNPQGGQQNRHAQTVSVRLDAERTRQLLQQAPSAYRTQVNDLLLTALAQVVCRWSGQPSTLVQLEGHGRETLFDDIDLTRTVGWFTSAYPLRLTPAVAGDAAPGESIKAIKEQLRQVPHKGLGYGVLRYLADSASKAAMQALPVAPITFNYLGQFDQSFASDALFRPLEESAGAAHDPHAPLPNELSIDSQVYGGELLLRWTFSAERYQPAAIEALAQDYLARLQALIAHCLSDGSGGLTPSDFPLADLDQAQLDALPVAATHIEDVYPLTPMQEGMLLHTLLEPGTGLYYMQDRYRINSALDPERFAQAWQAVIARHEALRASFCWDIGETMLQVIHKPGSTPIDYLDWRDVPEDQQEPRLQALLKSEREAGFNLLDQPPFHLRLIRVDEARYWFMMSNHHILIDAWCRSLLMNDFFDIYTALGEGREAQLTPAPRYRDYIGWLQRRGLAQARDWWQDNLRGFERPTPIPSDRPFLREHAGDSGGMVVGDCYTRLDEGDGAQLRELAQQHQLTVNTFAQAAWALTLRRLSGDRDVVFGVTVAGRPVELPQMQRTVGLFINTIALRVGMPGDDQRCSVRQWLSQLLDSNMQLREYEYLPLVTIQENSELPKGQPLFDSLFVFENAPVEVSVLDRAQSLNATSDSGRTHTNYPLTAVCYPGDDLGLHLSYDQRYFDESTVQNMLGEFKRLLLALIEGFHGDMSELALVSEQERTFLIEDCNQSEHAYPLDKSYVELFEAQVEAHPQRIAVSCLDRQLSYAELNIASNRLGHALIEAGVSFDQPVALLAERGVELPGMIIGSFKAGGGYLPLDPALPDSRLSGIIGQSGTPLLVCSAQCLEQGRALLEALTESARPQLLVWETVQQRESAQHNPGRYSAPDNLAYVIFTSGSTGLPKGVMVEQRGMLNNQLSKVPYLSLSERDVIAQTASQSFDISVWQFLAAPLFGARVDIVPNDIARDPQALLAHVQAQRISVLESVPSLITGLLAEQQATLDSLRWMLPTGEAMPPELASQWLQRYPQIGLVNAYGPAECSDDVAFFRVDAASTRSAYLPIGSPTDNNRLYLLDEALDLVPLGAVGELCVAGAGVGRGYVADPSRSVPVFVPHPFGAPGERLYRTGDLARRRKDGVLEYVGRVDHQVKIRGYRIELGEIETRLLEHSAIRETVVLAVDGPLGKVLAAYLVPSAATQDPDALRDELKNHLKASLPDYMVPAHLVILEAMPLTPNGKLDRKALPAPDVSQAQQEYLAPQTEMEQQLATIWADVLKVERVGITDNFFELGGHSLLATQVVTRAQKLLQRNVPLRAMFEFNTVQALAEHLQSLGGAQVDEQKFDRLADLMAELEGL
>NZ_CP041754.1|WP_004664605.1|2134332_2135091_+|thioesterase
MSTSVSLTLFCLPFSGASAMFYSPWRRKLPEWLNVRPLEPPGRGMRMDEALQTDIVQLANRLADEISAELDKPYALFGHSLGGLLAFELAHALRERGLPAPLALFASATAGPVRRDVSEYVAAKTDAQLIDRLRTLKGTSENVIANQELMQLMLPILRADFLLCGSFVYGVREPLGVPIHVFGGKQDSISVEELLDWQEETRTGFSLDMFEGHHFYLVDEQTQLLRLLRRYCEQHLARWRNSTSRQMNRAAG
>NZ_CP041754.1|WP_002552913.1|2133479_2134016_-|RNA-polymerase-factor-sigma-70
MTEHVITSKCDSPLLQAFVDNYLLLVKIAARIVGCRSRAEDVVQDAFFRLRSAPQATLTFKAQLSYLFQIVRNLAIDHYRKQALEQKYTGPEAEGLNVVIQGASPETSHINFSSLEKIADALTELPPRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVNGANAEA
>NZ_CP041754.1|WP_011168281.1|2132882_2133407_+|SgcJ/EcaC-family-oxidoreductase
MKTKLTALALLLAVSAPMVQASAEPSGYTYRMVAETPSNVNDKEIAGLFDRWNKALQTGNSKTVASLYAQDAVLQPTVSNKVRATPAEITDYFDHFLALKPVGEINYREIRRLGPDAAADNGVYTFTLTAADGKKTKVQARYSFLYHRIGNEWKILNHHSSAMPEVQPEYQVSR
>NZ_CP041754.1|WP_004664601.1|2131504_2132689_-|sensor-histidine-kinase
MQSPPHDPASALAIRNQYRQSQSRAARLRLLVDTGQELTQLPPEAMRQRVLQRACAFVAMDHGLLLEWGTDNNVQTTASHGNADRLSTLETVADPLAIGPQWLERSGPDLPCVLLLPLRGADEGCFGTLMLANSVGINAPDNEDIESLQLLATLLAAHLENNRLLEALVVRERTMSELVRQLFTAQEDERKRMAYDLHDGLAQTLAGLHQRLQGFAGRCPELPEPLDADLQAILKLAQHCVGEGRQLIGGLRPSVLDDFGLLQAVDKEADRLREAGIAVQWTSRSQARLPSHLEIALFRIAQEGINNVFKHAGASRVELALELSNDNVSLSLEDNGRGFITEKPRNGSSVQKLGLVAMQERASLLGGRLTCFSRLERGTRLRAIVPFTADKATT
>NZ_CP041754.1|WP_002552911.1|2130839_2131508_-|response-regulator-transcription-factor
MTDTVRLVLADDHEVTRTGFVSLLAGHPEFEVVGQAADGQQAIDLCQELQPDIAILDIRMPVLNGLGAARILQQRMPDLKVVIFTMDDSTDHLEAAISAGAVGYLLKDASRDEVIAGLQRVARGEEALNSTVSARLLRRMTERNTSGAALPESLTPRERQVLGLVAGGFSNREIGEKLGITTGTAKAHVEKVIGKLGASDRTQAAVRGVALGLVSQSTSEWR
>NZ_CP041754.1|WP_011168279.1|2128506_2130843_-|PAS-domain-S-box-protein
MTTTGSSRWEDLPLRGKALVAISLPLAILMFSLVLIYIAERQTAQAEEDVRRVLLVQGDIQTLHTQIAEGAASVRGYLLTHQEDFLPGYINAQPLIGAALARLNDNVRDEQMREHLKAIEPLINTKVDGLEKLRSMSMEDQQTVARILVENKYVLDQLRERIGIMREREDALLAERTEAAAATRERLLRSTLLAAACGIFGAILAVLMLSKGIVARVHQVQRNAQRLALGHPLLPQPPEKDEIGQLGTRLVEAGQLLAERERALRDNEERLRLIIEGVKDYGIFALDRNGYVTTWNAGAERIKGYTEQEIIGKHFSVFYLPEECPQHPDMALREATVNGRYTEESWRRRKDGSRFWASVVITAQYDGNDELRGFSKITRDISDRRVAEIALGTAREEAERASRAKSEFLSRMSHELRTPLNSILGFAQLLDMDSPASQRPQIGHILRAGQHLLKLINEVLDIARIEAGHVSLSLEPVSLSSVLEEALVLVSPMAADANIELKALPQLPDKLGVVADRQRLIQVLLNLLSNAIKYNRPEGQVRIEVEQSDERVTVSVIDTGYGIAPERIGQLFKPFERLDANPSVEGTGLGLALSKSMLEMMHGTLSVQNTPAEGCRFILELPLVLVHAPTAPLPQTGMPSDAAPVARLPARPAYHGKLLCIEDNLSSMALIETLMQRRPGIQLLSSMQGQLGLDLARQHAPQLILLDLNLPDIKGLEVLHRLRRLPATANTPVLMITADTRDKASCELKQAGATAILTKPIQVPVFLALLDQYLPEPT
>NZ_CP041754.1|WP_004664597.1|2128045_2128510_-|response-regulator
MTGDFRILIIDDQRPNLDLMEQLLAREGLTNVLSSTEPLRTLDLFNSFEPDLVVLDLHMPEFDGFAVLEQLNRRISANDYLPIMVLTADATRDTRLRALALGARDFISKPLDALETMLRIWNLLETRALYKSLRKLVPPENIELLRQPRTLTQQ
>NZ_CP041754.1|WP_041924502.1|2150341_2151259_-|zinc-ABC-transporter-solute-binding-protein
MPTLRTLTLALAMTGLFSNSLYAADAKADSAQPVRVLASLPITYGLGEILLKDSGVMLERAAAANLPGSRQTAYFTGRGADALRGLANNADAVIGLRSIWADDPLYPNARRSNIRIVEIDAARPVDGGLPGIAVQPGQGTDGLNSQPWLASNNMGRMADVLAADLVQLAPSAKPKIEANLAAFKQQLLKLSASSEAALAGADNLSVVSLSDRFGYLISGLNLELIDSQVLTDEQWTPEALSKLSATLKDNDVALVLDHRQPPEAVKSAIEAAGSTLLVLGIDGADPLAELQGDIQGVIEVLAGKG
>NZ_CP041754.1|WP_011168287.1|2151259_2152159_-|metal-ABC-transporter-permease
MDYETFRLFIQGLASSGYLPEALAYGFVVNALLAGLLIGPVLGGLGTLVVVKRFAFFSEAVGHAALTGVAIGILLGEPYTGPYGALFGYCLLFGIVLNYLRNRTGLAPDTLIGVFLSVSLALGASLLLVLAGKINVHILENVLFGSVLTVNGNDLLVLLIVGSLVMDLSLPLYNRIMLASFNPQLAAVRGVAVKALDYLFVILVTLITVAAVKVIGAILVGALLVIPAAAARLLSQSLKGFFWISVAIATASTLCGILLPIVFDLPVPSGAAIILVAGVAFALAAIARGTLPALKGNIG
>NZ_CP041754.1|WP_004664611.1|2152158_2152923_-|metal-ABC-transporter-ATP-binding-protein
MTVAQNLDIVSQGPDIEFNQVSLTLGRTTILDRVHFNVCAGSVHALVGPNGGGKSSLIKTLLGQTPHQGQLSLQWPAAPGLIGYVPQALEFDRGLPMTVDDFMAAMCQRRPAFMGLSKHYAAAIGDALERVGMQDKRKRRMGALSGGERQRVLLAQGLIPAPQLLVLDEPMSALDEAGIQVFERLLGDWRRSGITVLWIEHDLDAVRRLADQVTGLNRRVLFDEPAATALTPERLLTLFSAHPRTADAVNGSVA
>NZ_CP041754.1|WP_004660181.1|2152919_2153852_-|zinc-ABC-transporter-substrate-binding-protein
MPISFKRRPLLRVLLAGLFAALLAPSSYAADPAKRLRIGITLHPYYSYVSNIVGDKADVVPLIPAGFNPHAYEPRAEDIKRIGSLDVIVLNGVGHDDFADRMIAASETPNIKTIEANADVPLLAATGVAARGAGKVVNPHTFLSISASIAQVNNIARELGKLDPDNAKTYTANARAYGKRLRQMRADALAKLTKAPNADLRVATVHAAYDYLLREFGLEVTAVVEPAHGIEPSPSQLKKTIDQLRELDVKVIFSEMDFPSTYVDTIQRESGVKLYPLSHISYGEYTADKYEKEMAGNLDTVVRAIQESGT
>NZ_CP041754.1|WP_011168289.1|2153887_2154454_-|hypothetical-protein
MSAPTRQIVRPAGAGHETLYVMLLCLLILGVAAGVVSLHRDTQETHSLASHQLDARRDLTAAEQGIYADLRVTLDEIRLLATEQQTPVTPQQLGDEGFAPFAQDASSVSRGGHAWQMFEQSYLGLSQTPNVAGSFLMRIDSDNQPDIWINRSASIAPVSDLGDKALVDAGWKQVVAQFDAGVTRQHPH
>NZ_CP041754.1|WP_004664615.1|2154450_2154783_-|hypothetical-protein
MSARPSLRWLTASALCLLGLSGNALAHNPMCECKQIDNEQIRCTGGFSDGSGAPGVTLDVIGYDETILVPGKLGEDSTVTFKRPASEFYVLFDAGPGHVVEIDQADIPSP
>NZ_CP041754.1|WP_004660192.1|2154779_2155322_-|hypothetical-protein
MSKAAVAQPASSLSRFWHRWRFHINVLLVLIPLGFMPKYFSDNALDRGDQGLGQRDVGEIQVGPWSLRLAEDRNEAPRLSGPSGYMKSFNAALCNACIDRVKATYLRIGKPRSLRTAGVIFFGGGYRMSAFMQIPENTSPDSDLWITMEGWDGAVHQTSIPLQQASPTTVAWLKKQGAKP
>NZ_CP041754.1|WP_011168290.1|2155318_2156545_-|PepSY-domain-containing-protein
MSKKSRSKIWFLAHSWLALPIWFFVLIVCVTGTLAVISKEIMWLANPEMRDNRPSDDAQRMSFEQIRATIERNEPDLIVGTIMQPDGDYFALSVFVTYPDGRSVPAYVNPYTGVIQGLTPSFDFRRFTRALHGWWLVPFTNGYSWGWYLVSILGLPLLASLVTGLVVYKKFWRGFFKPVRFSQGPRIYWGDLHRLSGVWSIWFIAVISITGTWFLIQAILGDNQISISSKSQVASIIPHSAVPLTADGRPAPTISLEKAVEIAKERIPGLEASFITPPFNAYSNMQVGGRSWYPLMFQTAEINPYSGEIAASHLLSDRNKLEFVTESMRPLHTGDFGGIWIKLIWAFFGLLLSMMVLSGLLIWSKRTALATLNALKRESRTSPATFTPASTPDTTRSPLATRTPENSL
>NZ_CP041754.1|WP_004664616.1|2156841_2157819_+|TauD/TfdA-family-dioxygenase
MSHALSLDIRPLLAGAGSLPMLVQAPEPGLDLMDALGELKPLVAAHLYSAGGILFRGFDVGGAEAFREFAAGFGDPLLNYEFGSTPRSNVTKGVYTSTEYPAHQSIPLHNEQAYTLDWPMKIWFYSMIAAQTGGETPIADSREIYRRIPARIRDRFIEKKLMYVRNYGNGLDVEWSQVFNTEDESVVEAYCRAHNIECEWKDDGELRTRQICQAISRHPVTHDTVWFNQAHLFHISNLQPEVRETLLDVVDEEDLPRNVYYGDGSPLEESLLDEIRGVLDDCTVSFPWLENDVLMLDNMLTAHSRAPFTGKRKVVVAMAQGHSDK
>NZ_CP041754.1|WP_041924503.1|2158234_2161645_+|non-ribosomal-peptide-synthetase
MNPEHAQKLARRFVELPLEKRRLFLDGMRKENMDFSLFPIPSCAGLAERDGLSYAQQRMWFLWQLDPHSAAYNLPMSVCLNGPLELPLLERAFSALVERHESLRTTFGQEGDRAFQRVASPTPVSIRLIDLSQQPHEQRWASARQAMAEQSAQTFDLQRGPLFTVQVLRLAEQEHLLLLNLHHMITDGWSMNVLIDEWLRGYDALLAGKPLPFQPLPVQYRDYALWQRSWLEAGEQERQLDYWRSHLGEEHPVLELPTERPYPALPSHDGARLELALEPELLRNLKTLAQRQGVTLFVVLLATFKSLLHRYSGQTDIRVGGLIANRTRSETEGLIGCFINTQVLRSEVTAQTRFVDLLHTVRNASTGAQAHQELPFDAIIDALQPERSQSHNPLFQVMFNHQPVVADLLDKQLSGGLRVANLPAEQQALAQRSHAAASDLMLATSGEGEQLNAAFTYATDIFDQATIARLAAHWRNLLASVCADPLQTVAELSMLSTDERAQLLDIDSAAKADTTTPAHRQFEAQVQRTPSAPALILAREGQAPSLSYAELNERSNRLAWQLREQGVGPDVLVGVALGRSLDMPVALLAVLKAGGAYVPLDLSAPSERLRHVLQDSGLKLLLTHSQQKTTLPELAGIQCLCIDQMSSAAASPQNPDIAVDPANLAYVIYTSGSTGRPKGVAISHGALAEFVTLGANYSDLREGDRVLQFATHSFDGFVEQFYPPLCRGAAVVLRGKRLWDSTTFHQAIVEHGVTLADLPAAYWLTLVQDFAASPPAHYGALRQIHVGGEAMAVEGLRLWHKAGLGHVRLLNTYGPTEATVVSSIHDCSALTAEQVSWRGVPIGRALAGRRLYVLDDQLNLLPQGAVGELYIGGPGLARGYHAQPGLSAERFVADPFVPGERLYRTGDRARLRADGAVEYVGRVDHQVKIRGFRIELGEIESRLQQCTGVREAVVLAVELAGSTQLVAYVVPQVMANGDAEQLALRQGIKSQLQSSLPDYMVPTHLLLLPELPLTPSGKLDRKALPAPDSSQLQARYRAPHSDVEICLAAIWQEVLHVQQVGLDDHFFELGGHSLLAAQVIARIKTRLGISLPLRTLFEKPLLSDLAFEVAALTDNTTDNDWSDMDQFMDSLEEFGA

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Crispr_ID: NZ_CP041754_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041754_3

4219020-4219108

Orphan

Consensus_repeat	Method
CCTGTAGGAGCGGACTTGTCCGCAAAGAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041754_3

>merge|NZ_CP041754|3|4219020-4219108|CRISPRCasFinder
CCTGTAGGAGCGGACTTGTCCGCAAAGAGGCCAACAAGCCGAATGCTGACTTGTAGACTCCTGTAGGAGCGGACTTGTCCGCGAAGAGG

>NZ_CP041754|3|3|4219020-4219108|CRISPRCasFinder
CCTGTAGGAGCGGACTTGTCCGCAAAGAGG	CCAACAAGCCGAATGCTGACTTGTAGACT
CCTGTAGGAGCGGACTTGTCCGCGAAGAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041754.1\|WP_134933191.1\|4214578_4215547_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271175
NZ_CP041754.1\|WP_004663854.1\|4223230_4224334_+\|IS5-like-element-ISPsy19-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP041754.1\|WP_041924610.1\|4213127_4213334_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041754.1\|WP_054073027.1\|4215558_4216536_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041754.1\|WP_011169265.1\|4228839_4230204_+\|SidA/IucD/PvdA-family-monooxygenase	unknown	unknown	gnl\|CDD\|226017
NZ_CP041754.1\|WP_054073218.1\|4230252_4231674_+\|diaminobutyrate--2-oxoglutarate-transaminase-family-protein	unknown	unknown	gnl\|CDD\|235892
NZ_CP041754.1\|WP_011169259.1\|4216617_4218489_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227032
NZ_CP041754.1\|WP_019741194.1\|4205503_4206238_+\|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl\|CDD\|225524
NZ_CP041754.1\|WP_081002680.1\|4221642_4223193_-\|TIGR02391-family-protein	unknown	unknown	gnl\|CDD\|162834
NZ_CP041754.1\|WP_041924614.1\|4225235_4226162_+\|MupB	unknown	unknown	gnl\|CDD\|223409
NZ_CP041754.1\|WP_005622216.1\|4228313_4228763_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP041754.1\|WP_011169255.1\|4206954_4208565_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236724
NZ_CP041754.1\|WP_002554639.1\|4219265_4220513_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|235968
NZ_CP041754.1\|WP_161794678.1\|4208569_4209337_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP041754.1\|WP_086004864.1\|4213326_4214489_-\|IS3-like-element-ISPsy24-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP041754.1\|WP_011169254.1\|4206238_4206997_-\|siderophore-iron-reductase-FhuF	unknown	unknown	gnl\|CDD\|274875
NZ_CP041754.1\|WP_003349395.1\|4227863_4228298_+\|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|319912
NZ_CP041754.1\|WP_011169264.1\|4226173_4227862_+\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|341253
NZ_CP041754.1\|WP_011169256.1\|4210023_4212936_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|235966
NZ_CP041754.1\|WP_041924613.1\|4220790_4221582_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP041754.1\|WP_134933191.1\|4214578_4215547_+\|site-specific-integrase	gnl\|CDD\|271175	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine based site-specific recombinases (integrases) that share the same fold in their catalytic domain containing conserved active site residues. The best-studied members of this diverse superfamily include Human topoisomerase I, the bacteriophage lambda integrase, the bacteriophage P1 Cre recombinase, the yeast Flp recombinase, and the bacterial XerD/C recombinases. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. The enzymes differ in that topoisomerases cleave and then rejoin the same 5' and 3' termini, whereas a site-specific recombinase transfers a 5' hydroxyl generated by recombinase cleavage to a new 3' phosphate partner located in a different duplex region. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	6.69145e-11
NZ_CP041754.1\|WP_004663854.1\|4223230_4224334_+\|IS5-like-element-ISPsy19-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.72618e-25
NZ_CP041754.1\|WP_011169254.1\|4206238_4206997_-\|siderophore-iron-reductase-FhuF	gnl\|CDD\|274875	TIGR03951, Fe_III_red_FhuF, siderophore-iron reductase FhuF. Members of this protein family, including FhuF of E. coli, are siderophore ferric iron reductases that appear to play a role in iron removal from certain hydroxamate-type siderophores, including coprogen, ferrichrome, ferrioxamine B, and aerobactin. Genes occur in regularly in siderophore transport and/or biosynthesis clusters. The C-terminus includes four Cys residues in a C-C-10(X)-C-X-X-C motif that binds a 2Fe-2S cluster. Family TIGR03950 is similar, but especially in the C-terminal region, but likely acts on a different panel of siderophores. [Energy metabolism, Electron transport, Transport and binding proteins, Cations and iron carrying compounds].	1.96548e-67
NZ_CP041754.1\|WP_003349395.1\|4227863_4228298_+\|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	gnl\|CDD\|319912	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE). MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.	1.21747e-10
NZ_CP041754.1\|WP_011169265.1\|4228839_4230204_+\|SidA/IucD/PvdA-family-monooxygenase	gnl\|CDD\|226017	COG3486, IucD, Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism].	8.00755e-173
NZ_CP041754.1\|WP_054073218.1\|4230252_4231674_+\|diaminobutyrate--2-oxoglutarate-transaminase-family-protein	gnl\|CDD\|235892	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional.	0
NZ_CP041754.1\|WP_011169259.1\|4216617_4218489_+\|hypothetical-protein	gnl\|CDD\|227032	COG4688, COG4688, Uncharacterized protein conserved in bacteria [Function unknown].	1.94613e-30
NZ_CP041754.1\|WP_019741194.1\|4205503_4206238_+\|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl\|CDD\|225524	COG2977, EntD, Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism].	2.26617e-64
NZ_CP041754.1\|WP_081002680.1\|4221642_4223193_-\|TIGR02391-family-protein	gnl\|CDD\|162834	TIGR02391, conserved_hypothetical_protein, TIGR02391 family protein. This family consists of a relatively rare (~ 8 occurrences per 200 genomes) prokaryotic protein family. Genes for members are appear to be associated variously with phage and plasmid regions, restriction system loci, transposons, and housekeeping genes. The function is unknown. [Hypothetical proteins, Domain].	2.67569e-55
NZ_CP041754.1\|WP_005622216.1\|4228313_4228763_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.43972e-15
NZ_CP041754.1\|WP_011169255.1\|4206954_4208565_-\|HAMP-domain-containing-protein	gnl\|CDD\|236724	PRK10604, PRK10604, sensor protein RstB; Provisional.	3.32479e-86
NZ_CP041754.1\|WP_002554639.1\|4219265_4220513_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|235968	PRK07209, PRK07209, ribonucleotide-diphosphate reductase subunit beta; Validated.	0
NZ_CP041754.1\|WP_161794678.1\|4208569_4209337_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.96875e-83
NZ_CP041754.1\|WP_086004864.1\|4213326_4214489_-\|IS3-like-element-ISPsy24-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.08111e-89
NZ_CP041754.1\|WP_041924614.1\|4225235_4226162_+\|MupB	gnl\|CDD\|223409	COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein].	1.53612e-05
NZ_CP041754.1\|WP_011169264.1\|4226173_4227862_+\|non-ribosomal-peptide-synthetase	gnl\|CDD\|341253	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.	2.17686e-138
NZ_CP041754.1\|WP_011169256.1\|4210023_4212936_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|235966	PRK07207, PRK07207, ribonucleoside-diphosphate reductase subunit alpha.	0

>NZ_CP041754.1|WP_011169259.1|4216617_4218489_+|hypothetical-protein
MGAIFHFVGRNDLSAKENLNPYIEHARKNTPFANIEWKDDIWDITTFVIGRAQGKTRKLAYFKSLRDPSGSKQMVQVPLDPNFMSFAKAAFSESMRRLRLVEYNRHLSALRVIEQALISAGLNPCITNLTPFILDNAAEILREKYQNPWAMGRVLERIVTEIINPARLTPLLLEWRSPMEYAAPVRNDRVSTNSEKHTSRLPRLESILALADIHYKSKSMPDRVATAFVTLAMYAPSRASEILSLPVNCIRHADTKDGPTMGIAWAPAKGAMSMTKFAASDEFEAVIESTVNYLAELGAPARKAAEWYFNNPKDLYLPPGTEHLRGSPITLQEVSQILGKETAIQTSHAKRGYGLIATGRVTNERSRMQDSRKTGLAPLYEFDSLERYVLGKLPAIFPILDGHTKIKWHEALFVLPTNVLRPDGETLLYLPSPISTNQINHQLGTNPNGVTVFTRNGKANPDGSPMGISTHAFRHLLNTLAQSKHLSEALIAFWSGRKNISQNEWYDHLPQEAFIEAYLKLGDVGKPMQVAGQLEAKVRSIEVTHGLTREEALKLELGATHRTRYGICRHDHALTPCPKDKDCVSCGEHTFVKGDQRHLDEAEFQFKMHDKAVADAQKVSPPL
>NZ_CP041754.1|WP_054073027.1|4215558_4216536_+|hypothetical-protein
MILTEQLATTAGLLPESVSDEVVLLDGRIVKIKMGMVSSILDRDGNANPLRFDILQPGNRLHESIYSSFKITLSTHSLSYNATTSYALSHWLTLPEMQHKSEIGIPEINLLNKIPASYQPFTLPLLRRMRKLERPGLSDEVHDFLDQPFKWEQQSTGAYFGLITNDPERGAFTEQEIHNISQTLNSAYAEGTVSQADYTISWFFIGTGVRPVQAYRILRKDVKIHSKDGLEVTLRIPLAKGEMSSSQESWIRRAPTVLAECLIHYLDAGSSETNSEDKQRLFKEPSPECAGSMPSRLRAFRAPPERPLGDIDGLIGGRPRNGNGT
>NZ_CP041754.1|WP_134933191.1|4214578_4215547_+|site-specific-integrase
MAFFLRLDRAAQDRLVEASLEVRSNKVVRLEQVRSGGTPTPERTLISAVEGGYRIRTVANFLQFNHKRIVPKASEKPRKDIAKSRENAIAALRAQEPRAIPSDEGDAPEGLSEELMTVIEAAFEPGSATNPFQSDFHQYRNHLMYRIFTETAIRRSELRYIKVEDIAHAARRVKVRVSKTIARTLPISEQTAYDFHEFVMKHWAKIPAKSRRHGYLFTTGEGLHLSVEAINLVFRELRRKNQLPESIAPHAMRRTWNDRLSRKIDSLPPEKRMRPEEEAQIRKGLNGWSKKSKMEERYSRRHIREKADKIAEDLANDLHPTK
>NZ_CP041754.1|WP_086004864.1|4213326_4214489_-|IS3-like-element-ISPsy24-family-transposase
MTKQRRTFSAEFKREAAGLVLDQGYSHIEASRSLGVVESALRRWVNQLQQERNGVTPQSKALTPEQQKIQELEARIARLEREKSIFKKGYRALDVGRARAHALIDQLSARESVELLCEAFEVPRSCYYNHRLRRRNPDVERVRLRSRVNELFTQSRSAAGSRSIVLMMHEDGEQIGRFKVRSLMRELGLISKQPGSHAYRKATVERPDIPNILNRAFDVPAPNQVWCGDITYIWAQGKWHYLAVVMDLFARRVVGWALSSKPDTDLVIKALDMAYEQRGKPQGLLFHSDQGAQYGSRQFRQRLWRYRIRQSMSRRGNCWDNAPMERVFRSLKTEWIPTVGYMTAQEAQRDISHYLMHRYNWIRPHQFNNGLAPAQSEKRLNVVSGIS
>NZ_CP041754.1|WP_041924610.1|4213127_4213334_+|hypothetical-protein
MAVLVDQEGRPLFLPNVYATLRYRDVGFALTTIEKVLRALGMAYLWAATRTIDLEVVLRSDSFLVVVN
>NZ_CP041754.1|WP_011169256.1|4210023_4212936_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MQTDTTRENSPTGAPQASQTPQDLSATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGNAAASSRIHDTVARLTEQVSATFKRRMPSGGTIHIEEIQDQVELALMRAGEQKVARDYVIYRDSRAKERAVRAPEDQVQAHPSIRITLADGSFAPLDMGRLNTIVTEACESLAEVDANLIQTETLKNLYDGVALKDVNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLGVADSATHHEMADLYAKALPAYVATGIKFELLNPVLAEFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHKDGVRFELPQIFFMRVAMGLAIEEKAREDRAIEFYNLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGPWTLFSPSEVPDLHDLTGKAFQERYEYYEALTEYPGKVKLFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSINLPNHIVNGKLDTDKLKRTVDVAVRMLDNVIDINYYSVPQAKNSNLRHRPVGLGIMGFQDALYLQHIPYGSDAAVQFADTSMEAVSYYAIQASCDLADERGAYETFQGSLWSKGILPLDSQQILIEQRGEKYIDVDLKETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSGEFTVINPYLVRDLKARDLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVDTKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKTTYYLRALAATSTEKSTVNTGKLNAVSSGGHGPDDSAITAPRPTEAAPAGPAPVPKACAIDEPDCEACQ
>NZ_CP041754.1|WP_161794678.1|4208569_4209337_-|response-regulator-transcription-factor
MGQSQQGEIALEPHTWHVLIVEDDQRLAELTSDYLHNNGLRVSIEGNGALAAARIIAEQPDLVILDLMLPGEDGFSICRSVRDRYDGPILMLTARTDDTDHIQGLDTGADDFVCKPVHPRVLLARIHALLRRSEAPQVPAAELRRLVFGPLVVDNALREAWLREQSIELTGAEFDLLWLLVANAGRTLSREEIFTALRGVGYDGQDRSIDVRISRIRPKIGDDPIHPRLIKTVRSKGYLFVPEAAQDMSGHVFSG
>NZ_CP041754.1|WP_011169255.1|4206954_4208565_-|HAMP-domain-containing-protein
MNSIFLRIYGGMLGVLVLVALLGVFALHVLNQSRGEQYRERLAHGTFTVMADNLVPLNDIERRRALAIWERLLGIPLSLQSIEQAGLDSGARGRMARGQVVVEQIGPHAARVYRQLNDKEPLLLSGEVQQITEQLARATIYLLIDELVRFPVDEQPARLQALRSDKGFGFDLHLLALDQADLDDDQRRRIYEGDTVMALGKGGDSIRVLAGIVDTNWVLEIGPLYQMNPYPLHWLLVIALMGLCFIGLVVYLLVRRLERRVLELEAAATQIAQGSLQTRVPTEGSDSVGRVAAAFNSMAEHLQRSLMIQRELVRAVSHELRTPVARLRFGLEMVSDATTPEARRKYMRGMDSDIQDLDKLVDEMLTYARLEQGAPTLNFQRVDLDALIDQVIAELAPLRADVRVSRGECLTSEEGEAAWVEAEPRYLHRAVQNLVSNAMRHAENEVRISYRLEAQQCRIDVDDDGPGVPEEAWEQIFTPFMRIDDSRTRASGGHGLGLSIVRRIIHWHEGRALIGRSASLGGACFSLSWPRTQVPR
>NZ_CP041754.1|WP_011169254.1|4206238_4206997_-|siderophore-iron-reductase-FhuF
MFQPVLAAYAGAALSAQLFSGPLERFGQTLLAADDSRPDSRPVVALPDLLQAERLDLLLLSIYGPQLMPSQLPVLVSQWAKFYFMQIIPPVLVASLVHGWHWPLALEQVALAVDERGLPNGVRLAGEGEAWRGIPADPFQQFAGLLDDNLQPFIAALSAYGGLPCAVLWSSAGDYLEGCLAQLATCSDVSLAAGLALLSEKKRPDGRANPLFQAVRYVPQAQGGKPRRQRRVCCLSHRVEWVGRCEHCPLSG
>NZ_CP041754.1|WP_019741194.1|4205503_4206238_+|4'-phosphopantetheinyl-transferase-superfamily-protein
MPPMTQLPDLPVCCPELVQHWPLPHALPGAMLVSGQFDPLKLVDGDFQRCAVQMPASIQRSVAKRQAEFLAGRLCAREAMRQLDGRLHVPAVGEDRAPVWPADVCGSITHSTGWAAAVVANKRQWRGLGLDTENLLSHDRASRLAGEILTTAELADMAAGAQDQVALRVTLTFSIKEALFKALYPIVQKRFYFEDAQLLEWSADGSARLRLLIDLSSEWHAGKELDGQFSVLGDHLLSLVAVEG
>NZ_CP041754.1|WP_002554639.1|4219265_4220513_+|ribonucleotide-diphosphate-reductase-subunit-beta
MLSWDEFDKEDGEVVAKATNAGHANEANMDRLDSAGGLAAQEARAVTAADSAALIRAKKALDALDVAEGLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD
>NZ_CP041754.1|WP_041924613.1|4220790_4221582_+|hypothetical-protein
MNWKDHPIVVAAIATGSSIAFCVTFIVPIYEKNNLNKISELEKADTALNEKLVKATEELLQEKNKNEDTRKKLSNEIKEKSTKILELQEEDRLNSETPFPKGFRSVQLLDNVNNIEAAYKDNKISKTKLWISVDIDDNLFSSVTYYPITFGDSKRISHVLFHFKQLDSINIDENFNIVRKTDDDLKKYRDSLYNATLKILKEKYGESKYDPEEQEHRFYINKFWQISLTARGMVISTIYEPKSILNQNIDNKKNQHEAISQRY
>NZ_CP041754.1|WP_081002680.1|4221642_4223193_-|TIGR02391-family-protein
MYFVYTLLAELISNSYDADASKVSLKFHESARGPISINVVDDGHGMSSSDIQNKFLVIGRNRRKDEGDVPTRVFERLATGKKGLGKLALFGLAKVITVDTVCRGKRNRFVLDWDKLMSAEGSYNPTADLIDESTTKSDGTTIKLSQLKRQSAFDVESLADSLSKIFIVDKDFEILLIKSTGEELIVDNDRRYSQLNKQFEWEIDSLVDSGSIYKGEVGGMLYTAETPIKPNPGLRGVSLFSRGKLVNAPEFFSNSTSSHFFQYLTGWIQADFIDLLSEDVISTNRQSINWDNEEMQLFREFLSDLISKVNSSWREKRKEKKDDELKHITGIDTQKWMSTMPEDVQLQTSKIIDALSSEDAFTKFTPVIEALHAIIPEYPQLHWRHLNEKIRERIKVYYENKQYGEAADQSVKIYCEYIRELTGFAEDGVELTGKVFSSKNKPFFEVGDISTVTGINLQSGQDFFSRGLITGFRNPVAHAPLDAIIPKIFTEMDCLNVLSLTSYLLERLDRGRLIAD
>NZ_CP041754.1|WP_004663854.1|4223230_4224334_+|IS5-like-element-ISPsy19-family-transposase
MPKTGRPRSIAAEHYPVLVKLAHAQPYSSQAELALVFFAETGITAHPDTFAKALKMAGITRVKQRAKGSFQSPEPNKAYGYNETHRRQLPEQLYPSCLTDTEWALVADLFESQGGRGVPPLHSRRTLLEACCYVVRTGCSWRMLPRDFPHWDNVYKTFRRWSAQGKFEQMHDRLRAQWREREERADSPSAAILDSQSTRSSPQGGDSGYDAGKKVKGRKRSLIVDTLGLLLAVSISAASVQDRDAADDAVAYSKEKYPSLSTLFVDSAYAGKWAQRTHQLHAIDVQVIRGPNNRRTGQWHSEQGDLFSVEPVQTGFVVMPKRWVVERTHAWNERARRLIMHHDRLFAVSEAWVWLAEARILARRLTT
>NZ_CP041754.1|WP_041924614.1|4225235_4226162_+|MupB
MEQSIYLGGVSYETGESVDIAAAAMSPETLDLLRAPENNVKNFSHLPGDLFDSACTSVAHSLTASGRHASDIDAVFLISSMVDAQNNIDAQWLADLSTRLGMETIPFYAVGLAGCAGFHAGLKCASAMVASGDLKNALLLSFDQSGGDLQRVYGEGSDFIYVTGDAVSSCLVSRDAHQLPYKLCGHVQYTSNTRQIENFSSETDMRSISALMKRTYQQSSIPAASVSRFICNNYTLEATRLFCQLSGINHGKAVTRQLPRFAHCFGSDNLINLKQLEMDKELSAGDHILLFSTGPFQMGACIITCTAP
>NZ_CP041754.1|WP_011169264.1|4226173_4227862_+|non-ribosomal-peptide-synthetase
MNTIIERFHATVQRYPNEVALITHDTQLSYTGLLAHVNATAAALHTWFLDEQHRAISPSDKIGLSLNKGVDLYIAILAILTTGACYVPIDLKLNEQTRLQLSARCRCDLVVTPDWMENNTDLTVADETGRPAPNTSIVTDIVYTLFTSGSTGRPKGVNVTHLNVLNLVDWAINAFELGPGARVLQYSTINFDASVLDVFPTLLSGGALCIPTEDARMSEMALAAFCRRHAVTQAFLPPPLLAVFDAGRFSGIKTVLTGGESCHPQAIETWSNGRRLYNLYGPTEATVLVSCKAMSATTSAQNIGQPISGVRLHVLDEHQQPSDQGELYVAGLAVSAGYLNDSVATCEKFVNIAQLDASPLYRTGDRVQVTPSGDICFVGRLDRQVKIRGFRVELEEIEAMLFRLGHKEVAVMADPQGSLVAYIVAAQYLDQQMVRDQLGQYLPDYKVPQYVVQLPEMPYKANGKVDPSLLPSHLNSESQPAASTNYGETFDTLAQLWAAELKLPVTTFRQESNFRELGGSSINIMHLLSNLETSFGVVIDFIDFLEQPTLRFLMHALDNRNP
>NZ_CP041754.1|WP_003349395.1|4227863_4228298_+|glyoxalase/bleomycin-resistance/dioxygenase-family-protein
MLDTLNHVGLTVLNIDDTLAFYRQLTTVEVYEEAVHITGDGVGAVIDVIKPDYKSCMVRIGRRDFELIEHYSSKGKHIVTHHNDSGGIHLAFMVNNIDEIFARVKAMGITPTTEEPYTARELEGYRAFFFRDINDIQIEIGQLH
>NZ_CP041754.1|WP_005622216.1|4228313_4228763_+|GNAT-family-N-acetyltransferase
MNVIACELQHLDAAAYLFNQYRMFYQEADDLPTARDFLKSNLDNQTSRIYLLLDDQNEPVGFAQLYPATCSLAMKRFYWIYDLFVEPRVRRQGNARYLMNQLTDIFTREGAQRLSLDTAKANVTAQALYESLGYEAEQTFITYHKILNH
>NZ_CP041754.1|WP_011169265.1|4228839_4230204_+|SidA/IucD/PvdA-family-monooxygenase
MNDSTDRIYDLLGVGVGPFNLGLCSLLQPLDGIDSLFFEAKPHFHWHAGMLIGDATLQVPFMADLVTMVEPRSRFTYLNYLHEHGRLHQFYSYQSFYVPRVEYNHYCQWVSEQLDNIRFSARVVALEIVDGLFCLTVADQVTQERKLYRGRDLVVGVGTEPVWPKMANDFMQQENCIHSSGYVQNKRGLQAQKNITLVGSGQSAAEIFLDLLKDQPQFGYELNWLSRSRGFISMEYSKLGSEHFTPDYVEHFHALPEHSRLSAIQGQSHWYKGISIDTIKEIYDCLYIQSIERPLPVVLQSRTELEHIAAAGSSLSLSFRQLDMQKKFTFDTHALILATGYDYVFPPFLSSLGQWLEFDGKGHAAVNRDYTLKTSANIKGRIYVQNAEIHSHGVGAPDLGMGAYRSASIINNLTNRVHYPVREKNAFQTFGIAPKWDQPGDALSNPLHIAASLA
>NZ_CP041754.1|WP_054073218.1|4230252_4231674_+|diaminobutyrate--2-oxoglutarate-transaminase-family-protein
MQLSPTAISTFNHQIEAGEDVLPLYHFTKDQAFLNQECLESQVRSYPRRFPFTIARGQGAYIEDTHGQVYLDCLAGAGALPLGHNNAEVNQVLTAQIESLVPFQTLDVTTPVKDAFVQSVMAFMPADFARDACIQFCGPSGSDAVEAALKIAKQVTGRDNIISFHGAYHGMTNGALALMGNLNAKSRRSSLMPGVHFFPFPYSLRCKFGVGGEAGDRASIRYIESVLHDQESGIVKPAALILEHIQGEGGVIPASAYWLQEIRRICTELEIVLIVDEIQCGIGRSGNHFAFEHAGITPDILVLSKAIGGGQPLACLVFKKDLDCWKAGEHAGTFRGNQLAMAAGAKTLEIIQRDNLTHNAGVLGNYVMGKLQALSKQHPCIAQVRGRGRGLMVGMEITAPGQTDRLGDPLTDPERAAAIQRAALSRGLIIEKEGRHGAVLRLLPPLNITRAQLDFAVRVFAQALTMTSRDRHD

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

23239 : 70370

Ralstonia_phage(14.29%)

integrase,transposase,plate

attL 23081:23118|attR 39514:39551

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
23081:23118	attL	NA	NA	NA	NA
WP_011167331.1\|23239_24313_+\|integrase	tyrosine-type recombinase/integrase	A0A1S6L1B6	Ralstonia_phage	2.3e-61	41.1
WP_081002666.1\|24728_26225_+	recombinase family protein	H7BUV7	unidentified_phage	1.0e-06	27.3
WP_011167333.1\|26221_27130_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_011167334.1\|27129_28095_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_005737332.1\|28221_28803_-	hypothetical protein	NA	NA	NA	NA
WP_162885656.1\|28852_29047_+	hypothetical protein	NA	NA	NA	NA
WP_081002667.1\|29829_30207_+	hypothetical protein	NA	NA	NA	NA
WP_011167336.1\|30494_33512_-	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_011167337.1\|33928_35398_-	transcriptional regulator	NA	NA	NA	NA
WP_011167338.1\|35397_36744_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_011167339.1\|36730_39136_-	SAM-dependent DNA methyltransferase	A0A220A2U4	Liberibacter_phage	2.1e-25	28.7
WP_004663115.1\|39661_39997_+	hypothetical protein	NA	NA	NA	NA
39514:39551	attR	NA	NA	NA	NA
WP_041924376.1\|40154_40919_+	hypothetical protein	NA	NA	NA	NA
WP_041924377.1\|40979_41750_+	SDR family NAD(P)-dependent oxidoreductase	Q56AQ6	Bacillus_thuringiensis_phage	6.1e-40	43.1
WP_004663122.1\|41781_42246_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004663124.1\|42242_42962_+	hypothetical protein	NA	NA	NA	NA
WP_004663126.1\|43100_43571_+	hypothetical protein	NA	NA	NA	NA
WP_004663854.1\|43674_44778_-\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_145119537.1\|44906_45887_+\|transposase	IS5 family transposase	Q38213	Escherichia_phage	4.2e-94	55.6
WP_011167345.1\|46623_47646_-	sel1 repeat family protein	NA	NA	NA	NA
WP_011167346.1\|47647_49579_-	phospholipase	NA	NA	NA	NA
WP_003343651.1\|49629_49884_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_004666928.1\|50229_51489_-\|transposase	IS256-like element ISPsy17 family transposase	A0A218MNI5	uncultured_virus	1.7e-42	41.7
WP_041924379.1\|52331_53429_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_002551414.1\|53521_54040_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_011167349.1\|54195_56688_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004663091.1\|56684_57608_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_011167350.1\|57639_61560_-	ImcF-like family protein	NA	NA	NA	NA
WP_002551418.1\|61590_62304_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_005781681.1\|62300_63644_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_011167351.1\|63640_64396_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_054072862.1\|64421_67025_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	9.8e-90	30.4
WP_002551422.1\|67021_68092_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_002551423.1\|68055_69888_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_003420335.1\|69887_70370_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_2

685796 : 706085

Pseudomonas_phage(44.44%)

integrase,lysis,tail

attL 683229:683243|attR 711761:711775

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
683229:683243	attL	NA	NA	NA	NA
WP_004643929.1\|685796_686039_-	transcriptional regulator	A0A2H4J8B4	uncultured_Caudovirales_phage	1.1e-16	51.2
WP_004642420.1\|686160_686409_-	DUF1654 domain-containing protein	NA	NA	NA	NA
WP_004663805.1\|686563_687175_-	helix-turn-helix domain-containing protein	A0A0M4QWY1	Salmonella_phage	5.7e-49	48.7
WP_004642425.1\|687364_687808_+	hypothetical protein	A0A2H4J8A5	uncultured_Caudovirales_phage	6.0e-24	45.8
WP_004644430.1\|688080_688275_+	Com family DNA-binding transcriptional regulator	B5TK59	Pseudomonas_phage	2.7e-13	92.1
WP_011167612.1\|688277_689450_+	cellulase family glycosylhydrolase	NA	NA	NA	NA
WP_003411734.1\|689572_689962_+	hypothetical protein	A0A059VK40	Pseudomonas_phage	2.3e-43	76.4
WP_011167613.1\|689942_690281_+	hypothetical protein	A0A059VJW1	Pseudomonas_phage	4.2e-17	57.7
WP_011167615.1\|690732_691077_+\|tail	phage tail protein	B5TK68	Pseudomonas_phage	9.4e-41	70.4
WP_002551918.1\|691073_691370_+\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	4.3e-34	77.4
WP_011167616.1\|693634_695020_+	2-hydroxyacid dehydrogenase	B5TK71	Pseudomonas_phage	5.4e-111	46.2
WP_011167617.1\|695023_696151_+	hypothetical protein	B5TK72	Pseudomonas_phage	4.0e-112	60.2
WP_004660753.1\|696371_696917_+	glycoside hydrolase family 19 protein	A0A2H4JHX4	uncultured_Caudovirales_phage	9.9e-69	71.7
WP_004660754.1\|696913_697423_+\|lysis	lysis protein	B5TK84	Pseudomonas_phage	3.3e-26	47.2
WP_011167620.1\|698015_699191_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A0D4DBR3	Acinetobacter_phage	8.4e-65	37.6
WP_041924422.1\|699190_699493_+	hypothetical protein	NA	NA	NA	NA
WP_011167621.1\|699554_699755_-	AlpA family transcriptional regulator	B7SYF9	Stenotrophomonas_phage	6.7e-07	53.1
WP_081002662.1\|702021_703221_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	2.6e-98	48.6
WP_002551940.1\|703581_704181_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.5e-73	64.7
WP_011167625.1\|704202_705252_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	2.6e-110	57.4
WP_004663832.1\|705248_706085_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.3e-69	55.8
711761:711775	attR	NA	NA	NA	NA

DBSCAN-SWA_3

815364 : 907331

Bacillus_phage(36.36%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011167686.1\|815364_816468_-\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_011167688.1\|818880_819693_-	EAL domain-containing protein	NA	NA	NA	NA
WP_138858496.1\|819771_820281_-	hypothetical protein	NA	NA	NA	NA
WP_081002565.1\|821653_822406_-	hypothetical protein	NA	NA	NA	NA
WP_134933246.1\|822925_824416_-	hypothetical protein	NA	NA	NA	NA
WP_011167690.1\|824511_825027_-	adhesin	NA	NA	NA	NA
WP_011167691.1\|825098_825812_-	periplasmic chaperone protein	NA	NA	NA	NA
WP_004663854.1\|825913_827017_+\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_134933031.1\|828855_829131_-	hypothetical protein	NA	NA	NA	NA
WP_011167693.1\|829129_829768_+	response regulator transcription factor	NA	NA	NA	NA
WP_011167694.1\|831790_833518_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_145119515.1\|833563_839089_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_011167696.1\|840127_841144_+	DUF4113 domain-containing protein	I6RSM4	Salmonella_phage	1.2e-72	43.1
WP_041924437.1\|841352_842099_+	hypothetical protein	NA	NA	NA	NA
WP_011167698.1\|843187_844159_-	type III effector	NA	NA	NA	NA
WP_086004858.1\|845671_846893_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.6e-105	68.5
WP_041924439.1\|847107_847479_-	LacI family transcriptional regulator	NA	NA	NA	NA
WP_041924726.1\|848090_851057_-	autotransporter domain-containing protein	NA	NA	NA	NA
WP_011167703.1\|851443_851944_+	hypothetical protein	NA	NA	NA	NA
WP_011167704.1\|852006_852231_-	hypothetical protein	NA	NA	NA	NA
WP_054073231.1\|852480_853737_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_041924441.1\|853733_855872_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	1.0e-31	27.2
WP_011167708.1\|857324_858941_+	hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA
WP_002553187.1\|858975_859200_-	hypothetical protein	NA	NA	NA	NA
WP_019742039.1\|859373_859550_-	hypothetical protein	NA	NA	NA	NA
WP_005745450.1\|859614_859812_-	hypothetical protein	NA	NA	NA	NA
WP_054073006.1\|860227_861304_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
WP_011167713.1\|861266_861800_-	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA
WP_011167714.1\|861796_862606_-	protein-glutamate O-methyltransferase	NA	NA	NA	NA
WP_002553202.1\|862615_863155_-	purine-binding chemotaxis protein CheW	NA	NA	NA	NA
WP_011167715.1\|863205_864861_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.4e-09	30.4
WP_011167716.1\|864891_866994_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_005732323.1\|867040_867331_-	STAS domain-containing protein	NA	NA	NA	NA
WP_002553206.1\|867354_867723_-	response regulator	W8CYM9	Bacillus_phage	1.1e-15	37.9
WP_011167717.1\|867732_868947_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	3.4e-08	30.8
WP_011167718.1\|869429_870728_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_080164415.1\|870824_870932_-	DUF3094 family protein	NA	NA	NA	NA
WP_011167719.1\|870945_871479_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_003430735.1\|871475_872105_-	DUF1780 domain-containing protein	NA	NA	NA	NA
WP_011167720.1\|872293_873700_+	TolC family outer membrane protein	NA	NA	NA	NA
WP_011167721.1\|873846_876009_+	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	2.6e-51	29.3
WP_011167722.1\|876001_877354_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_011167723.1\|877602_892926_+	calcium binding hemolysin protein	NA	NA	NA	NA
WP_007251656.1\|893390_893600_-	DNA gyrase inhibitor YacG	NA	NA	NA	NA
WP_011167725.1\|893596_894220_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_011167726.1\|894216_895089_-	prepilin peptidase	NA	NA	NA	NA
WP_011167727.1\|895090_896308_-	type II secretion system F family protein	NA	NA	NA	NA
WP_011167728.1\|896310_898005_-	type IV-A pilus assembly ATPase PilB	NA	NA	NA	NA
WP_011167729.1\|898229_898625_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_004663377.1\|899189_900449_+\|transposase	IS256-like element ISPsy17 family transposase	A0A218MNI5	uncultured_virus	1.7e-42	41.7
WP_138858486.1\|901830_904284_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.2e-42	41.7
WP_011167731.1\|904473_905019_-	DUF1523 family protein	A0A219UQV4	Bacillus_phage	4.1e-06	33.3
WP_011167732.1\|905138_906137_+	carboxylate--amine ligase	NA	NA	NA	NA
WP_011167733.1\|906191_907331_+\|protease	trypsin-like serine protease	W5SAB9	Pithovirus	2.4e-08	29.6

DBSCAN-SWA_4

2059866 : 2110326

uncultured_Caudovirales_phage(18.75%)

transposase,holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086004864.1\|2059866_2061028_+\|transposase	IS3-like element ISPsy24 family transposase	Q716C2	Shigella_phage	4.5e-87	55.3
WP_011168244.1\|2061959_2062709_-	3-oxoacyl-ACP reductase FabG	NA	NA	NA	NA
WP_011168245.1\|2062823_2063390_+	cysteine hydrolase	NA	NA	NA	NA
WP_011168246.1\|2063403_2066148_-	DEAD/DEAH box helicase	A8C6A2	Antheraea_pernyi_nuclear_polyhedrosis_virus	6.2e-42	29.4
WP_004659810.1\|2066223_2066748_-	hypothetical protein	NA	NA	NA	NA
WP_011168247.1\|2066759_2070212_-	transcription-repair coupling factor	NA	NA	NA	NA
WP_011168248.1\|2070402_2071866_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_011168249.1\|2072012_2073257_+	MFS transporter	NA	NA	NA	NA
WP_011168250.1\|2073341_2074634_-	MFS transporter	Q6JIH2	Burkholderia_virus	9.6e-70	38.7
WP_032704117.1\|2075059_2076043_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_004664563.1\|2076209_2077604_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA
WP_005744379.1\|2077646_2078369_-	glycerophosphodiester phosphodiesterase	A0A292GJA3	Xanthomonas_phage	2.1e-05	38.6
WP_011168251.1\|2078441_2079029_-	PilZ domain-containing protein	NA	NA	NA	NA
WP_004659831.1\|2079131_2080382_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA
WP_002552890.1\|2080374_2081073_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	4.7e-39	42.1
WP_011168253.1\|2081150_2082395_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA
WP_011168254.1\|2082524_2083355_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A126HHM5	Vibrio_phage	1.5e-31	38.5
WP_002552893.1\|2083610_2083877_-	DUF4404 family protein	NA	NA	NA	NA
WP_004659841.1\|2083980_2084589_-	hypothetical protein	NA	NA	NA	NA
WP_004659844.1\|2084788_2085490_+	VacJ family lipoprotein	NA	NA	NA	NA
WP_002552896.1\|2085578_2085878_-	PilZ domain-containing protein	NA	NA	NA	NA
WP_002552897.1\|2086145_2087330_+	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_002552898.1\|2087326_2087812_+	STAS domain-containing protein	NA	NA	NA	NA
WP_004659848.1\|2087897_2088824_-	transaldolase	A0A1D7SEQ4	Cyanophage	6.5e-12	34.4
WP_011168256.1\|2089039_2091409_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_011168257.1\|2091649_2092894_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_011168258.1\|2093028_2093472_+	ultraviolet light resistance protein RulA	A0A1L5C2A3	Pseudoalteromonas_phage	2.2e-10	33.7
WP_004659854.1\|2093550_2093790_+	hypothetical protein	NA	NA	NA	NA
WP_019742372.1\|2093924_2095052_+	sensor histidine kinase	A0A1B0VMK3	Pseudomonas_phage	2.2e-123	60.6
WP_004659858.1\|2095029_2095386_-	hypothetical protein	NA	NA	NA	NA
WP_011168261.1\|2095784_2096708_+	hypothetical protein	NA	NA	NA	NA
WP_138858492.1\|2096954_2098139_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.6e-42	41.7
WP_004663854.1\|2098296_2099400_+\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_011168262.1\|2100345_2100552_+\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	1.5e-22	74.6
WP_011168263.1\|2100628_2101669_+	phage late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	8.6e-146	73.1
WP_011168264.1\|2101707_2102253_+	glycoside hydrolase family 19 protein	A0A2H4JHX4	uncultured_Caudovirales_phage	6.9e-70	73.3
WP_011168265.1\|2102456_2103251_+	DNA adenine methylase	C7BGE1	Burkholderia_phage	1.4e-100	65.4
WP_005739928.1\|2103784_2104273_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_011168266.1\|2104282_2105260_+	hypothetical protein	NA	NA	NA	NA
WP_041924497.1\|2105832_2106102_+	hypothetical protein	NA	NA	NA	NA
WP_004663377.1\|2106341_2107601_-\|transposase	IS256-like element ISPsy17 family transposase	A0A218MNI5	uncultured_virus	1.7e-42	41.7
WP_041924498.1\|2107882_2108518_-	hypothetical protein	NA	NA	NA	NA
WP_041924499.1\|2108602_2108962_-	hypothetical protein	NA	NA	NA	NA
WP_011168267.1\|2109115_2109475_+	hypothetical protein	NA	NA	NA	NA
WP_003377395.1\|2110002_2110326_+\|holin	phage holin, lambda family	A0A1V0DYG4	Shewanella_phage	4.0e-09	39.0

DBSCAN-SWA_5

2416417 : 2425205

uncultured_Caudovirales_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002553164.1\|2416417_2416720_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	1.8e-11	38.9
WP_002553165.1\|2416700_2417057_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_011168396.1\|2417310_2418246_-	hypothetical protein	A0A0E3M3Z6	Verrucomicrobia_phage	5.5e-35	45.6
WP_041924513.1\|2418330_2418657_+	hypothetical protein	NA	NA	NA	NA
WP_011168397.1\|2418689_2419328_-	hypothetical protein	K7R9L4	Vibrio_phage	3.4e-36	40.5
WP_011168398.1\|2419387_2419699_-	hypothetical protein	A0A2H4JAQ1	uncultured_Caudovirales_phage	2.2e-28	60.2
WP_011168399.1\|2419700_2420291_-	hypothetical protein	NA	NA	NA	NA
WP_041924514.1\|2420290_2420629_-	hypothetical protein	NA	NA	NA	NA
WP_003364229.1\|2421219_2421621_-	helix-turn-helix transcriptional regulator	A0A2H4JA92	uncultured_Caudovirales_phage	1.2e-18	61.7
WP_041924516.1\|2421958_2422258_+	DUF1654 domain-containing protein	A0A2D1GND3	Pseudomonas_phage	1.8e-27	67.4
WP_041924517.1\|2422337_2423165_-	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_041924518.1\|2423167_2423980_-	hypothetical protein	NA	NA	NA	NA
WP_011168402.1\|2424026_2424887_-	LexA family transcriptional regulator	A0A2D1GNH0	Pseudomonas_phage	1.1e-64	62.6
WP_041924519.1\|2424992_2425205_+	Cro/Cl family transcriptional regulator	A0A2H4J1L8	uncultured_Caudovirales_phage	1.3e-05	49.2

DBSCAN-SWA_6

2690007 : 2699665

Pseudomonas_phage(63.64%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011168550.1\|2690007_2690730_-	S24 family peptidase	K7PH71	Enterobacterial_phage	3.6e-34	52.7
WP_041924538.1\|2690833_2691064_+	hypothetical protein	A0A1W6JTD1	Pseudomonas_phage	1.3e-17	60.5
WP_004418163.1\|2691093_2691282_+	hypothetical protein	B5WZX7	Pseudomonas_phage	3.1e-06	41.9
WP_050772291.1\|2693341_2693671_+	hypothetical protein	A0A059VFX9	Pseudomonas_phage	3.2e-30	85.9
WP_011168554.1\|2693731_2694265_+	glycoside hydrolase family 19 protein	A0A059VA40	Pseudomonas_phage	2.7e-87	91.5
WP_041924798.1\|2694297_2694675_+	hypothetical protein	A0A291AUV3	Sinorhizobium_phage	2.5e-23	47.1
WP_011168555.1\|2694674_2695190_+	DUF2514 domain-containing protein	A0A059VF51	Pseudomonas_phage	1.1e-64	82.5
WP_011168556.1\|2695202_2695415_+	hypothetical protein	A0A059VK06	Pseudomonas_phage	4.9e-32	100.0
WP_011168557.1\|2695411_2696656_+	SGNH/GDSL hydrolase family protein	A0A059VA35	Pseudomonas_phage	3.1e-219	93.0
WP_004665279.1\|2697417_2698488_-	DNA topoisomerase IB	A0A0G2Y4T8	Acanthamoeba_polyphaga_mimivirus	1.5e-44	33.7
WP_011168559.1\|2698576_2699665_-	molybdenum ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.8e-20	32.3

DBSCAN-SWA_7

3122943 : 3162497

uncultured_virus(40.0%)

integrase,transposase,capsid

attL 3138036:3138095|attR 3161185:3162558

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011168770.1\|3122943_3123978_-\|transposase	IS110-like element ISPsy16 family transposase	NA	NA	NA	NA
WP_032704177.1\|3124146_3125139_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_004665401.1\|3125143_3125638_+	TRAP transporter small permease subunit	NA	NA	NA	NA
WP_004665402.1\|3125634_3126921_+	TRAP transporter large permease	NA	NA	NA	NA
WP_004665403.1\|3126946_3128173_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_011168771.1\|3128145_3129039_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011168772.1\|3129118_3130192_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_011168773.1\|3130340_3131408_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_011168774.1\|3131672_3133043_+	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_011168775.1\|3133039_3133888_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_019740990.1\|3134036_3134603_+	NAD(P)-dependent alcohol dehydrogenase	NA	NA	NA	NA
WP_011168777.1\|3135318_3136056_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_019740988.1\|3136241_3137420_+	DUF2252 domain-containing protein	NA	NA	NA	NA
WP_004665414.1\|3137461_3137902_-	tryptophan-rich sensory protein	A0A1V0S976	Catovirus	1.1e-09	31.1
3138036:3138095	attL	NA	NA	NA	NA
WP_004666928.1\|3138088_3139348_+\|transposase	IS256-like element ISPsy17 family transposase	A0A218MNI5	uncultured_virus	1.7e-42	41.7
WP_011168779.1\|3139448_3141044_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA
WP_011168780.1\|3141074_3141947_-	ABC transporter permease	NA	NA	NA	NA
WP_004665418.1\|3141946_3142891_-	ABC transporter permease	NA	NA	NA	NA
WP_011168781.1\|3142919_3144422_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011168783.1\|3144822_3146139_-	zonular occludens toxin	Q56VN9	Pseudomonas_phage	9.4e-89	44.5
WP_041924560.1\|3146140_3146500_-	DUF2523 domain-containing protein	NA	NA	NA	NA
WP_041924561.1\|3147892_3148132_-\|capsid	major capsid protein	NA	NA	NA	NA
WP_041924562.1\|3148394_3148688_-	hypothetical protein	NA	NA	NA	NA
WP_041924563.1\|3148953_3149190_-	hypothetical protein	NA	NA	NA	NA
WP_011168786.1\|3149186_3150317_-	hypothetical protein	NA	NA	NA	NA
WP_116818349.1\|3150446_3150824_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041924562.1\|3151060_3151354_-	hypothetical protein	NA	NA	NA	NA
WP_041924563.1\|3151619_3151856_-	hypothetical protein	NA	NA	NA	NA
WP_011168786.1\|3151852_3152983_-	hypothetical protein	NA	NA	NA	NA
WP_116818349.1\|3153112_3153490_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041924565.1\|3153572_3153770_+	hypothetical protein	NA	NA	NA	NA
WP_011168788.1\|3154305_3155514_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_017684507.1\|3157035_3159336_+	hypothetical protein	NA	NA	NA	NA
WP_017683874.1\|3159461_3159848_+	hypothetical protein	NA	NA	NA	NA
WP_086004866.1\|3160063_3161222_+\|transposase	IS3-like element ISPsy24 family transposase	Q716C2	Shigella_phage	2.2e-86	54.2
WP_004666928.1\|3161237_3162497_+\|transposase	IS256-like element ISPsy17 family transposase	A0A218MNI5	uncultured_virus	1.7e-42	41.7
3161185:3162558	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3498943 : 3509403

uncultured_Caudovirales_phage(75.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004665680.1\|3498943_3499615_-	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	6.6e-107	92.8
WP_004665681.1\|3499969_3500878_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004665682.1\|3500863_3501643_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_011168954.1\|3501657_3502959_-	MFS transporter	Q6JIH2	Burkholderia_virus	2.8e-61	36.1
WP_004659532.1\|3503193_3503586_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.4e-56	81.5
WP_004659531.1\|3503587_3503950_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	1.4e-34	62.0
WP_011168955.1\|3503949_3504249_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	3.8e-30	62.6
WP_004659529.1\|3504245_3504581_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	3.4e-43	77.5
WP_041924588.1\|3504577_3505579_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	5.7e-163	82.9
WP_004665685.1\|3506727_3508122_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_002553992.1\|3508122_3509403_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	5.3e-97	45.8

DBSCAN-SWA_9

4047990 : 4101468

uncultured_virus(25.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004666928.1\|4047990_4049250_-\|transposase	IS256-like element ISPsy17 family transposase	A0A218MNI5	uncultured_virus	1.7e-42	41.7
WP_010207043.1\|4050062_4051043_-\|transposase	IS5-like element ISPsy2 family transposase	Q38213	Escherichia_phage	1.2e-93	55.6
WP_004663854.1\|4051171_4052275_+\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_004660793.1\|4052666_4053107_+	hypothetical protein	NA	NA	NA	NA
WP_004665923.1\|4056141_4057191_-	hypothetical protein	NA	NA	NA	NA
WP_011169189.1\|4057423_4058779_-	DUF1329 domain-containing protein	NA	NA	NA	NA
WP_002554493.1\|4059284_4060442_-	glutathionylspermidine synthase family protein	A0A219Y9C1	Aeromonas_phage	3.2e-64	38.8
WP_004657437.1\|4060453_4061200_-	DUF1190 domain-containing protein	NA	NA	NA	NA
WP_004657435.1\|4061227_4061653_-	DUF350 domain-containing protein	NA	NA	NA	NA
WP_004657433.1\|4061666_4062332_-	DUF2491 family protein	NA	NA	NA	NA
WP_002554497.1\|4062412_4062967_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_002554498.1\|4062997_4063705_-	phage shock protein A	NA	NA	NA	NA
WP_004665924.1\|4063731_4064385_-	YjfI family protein	NA	NA	NA	NA
WP_004665925.1\|4064744_4067411_-	aminopeptidase N	NA	NA	NA	NA
WP_004665926.1\|4067423_4068257_-	DUF2797 domain-containing protein	NA	NA	NA	NA
WP_002554502.1\|4068253_4068514_-	DUF1315 family protein	NA	NA	NA	NA
WP_004657419.1\|4068542_4069415_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_011169190.1\|4069411_4070383_-	ser/threonine protein phosphatase	NA	NA	NA	NA
WP_002554505.1\|4070382_4071273_-	NAD(+) kinase	NA	NA	NA	NA
WP_011169191.1\|4071509_4072049_+	membrane protein	NA	NA	NA	NA
WP_041924602.1\|4072092_4072530_+	hypothetical protein	NA	NA	NA	NA
WP_011169192.1\|4072593_4073577_+	DUF1853 family protein	NA	NA	NA	NA
WP_004665931.1\|4073542_4074823_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.4e-174	73.9
WP_011169193.1\|4076398_4076710_+	DUF962 domain-containing protein	NA	NA	NA	NA
WP_011169194.1\|4076719_4077541_-	UDP-2,3-diacylglucosamine diphosphatase	A0A218MKA7	uncultured_virus	1.0e-64	46.6
WP_002554513.1\|4077633_4077936_-	SelT/SelW/SelH family protein	NA	NA	NA	NA
WP_004657395.1\|4077987_4078794_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	4.8e-11	28.3
WP_011169195.1\|4078796_4079654_-	ABC transporter permease	NA	NA	NA	NA
WP_011169196.1\|4079911_4081000_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_004657392.1\|4081061_4081967_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004667815.1\|4082186_4082801_+	cysteine dioxygenase	NA	NA	NA	NA
WP_011169198.1\|4082797_4084381_+	rhodanese-related sulfurtransferase	NA	NA	NA	NA
WP_011169199.1\|4084437_4085427_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004667818.1\|4085459_4086653_+	acyl-CoA/acyl-ACP dehydrogenase	NA	NA	NA	NA
WP_011169200.1\|4086660_4088931_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_004665939.1\|4088959_4089976_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011169202.1\|4090067_4090976_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011169203.1\|4091164_4091887_+	pirin family protein	NA	NA	NA	NA
WP_011169204.1\|4092044_4092467_+	cupin domain-containing protein	NA	NA	NA	NA
WP_041924603.1\|4093261_4094020_+	hypothetical protein	NA	NA	NA	NA
WP_011169206.1\|4094074_4094557_-	GAF domain-containing protein	NA	NA	NA	NA
WP_002554531.1\|4094553_4095444_-	ATP-binding protein	NA	NA	NA	NA
WP_005755107.1\|4095524_4097873_+	response regulator	A0A1V0SGX0	Hokovirus	1.2e-41	27.6
WP_004665941.1\|4097879_4098365_-	glutathione peroxidase	Q6VZR0	Canarypox_virus	5.2e-21	35.4
WP_002554534.1\|4098515_4098911_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_011169208.1\|4099101_4100313_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_011169209.1\|4100580_4101468_+\|protease	protease HtpX	NA	NA	NA	NA

DBSCAN-SWA_10

4727563 : 4800623

uncultured_virus(20.0%)

integrase,bacteriocin,transposase,tail

attL 4725053:4725067|attR 4737385:4737399

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4725053:4725067	attL	NA	NA	NA	NA
WP_011169460.1\|4727563_4729381_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_162885658.1\|4729680_4731255_+	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_054073222.1\|4731247_4732786_+	hypothetical protein	A0A286S1S1	Arthrobacter_phage	3.6e-07	25.3
WP_116818323.1\|4732838_4733525_-	hypothetical protein	NA	NA	NA	NA
WP_011169464.1\|4733995_4734565_+	recombinase family protein	A0A219Y9V9	Aeromonas_phage	4.6e-24	38.0
WP_050772277.1\|4735176_4735812_+	helix-turn-helix domain-containing protein	A0A2H4P704	Pseudomonas_phage	2.5e-07	29.5
WP_041924629.1\|4735947_4736292_+	hypothetical protein	NA	NA	NA	NA
WP_116818322.1\|4738665_4739712_-	hypothetical protein	A0A2I7RNF6	Vibrio_phage	1.1e-52	45.0
4737385:4737399	attR	NA	NA	NA	NA
WP_011169467.1\|4740164_4740665_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_032615126.1\|4740694_4741084_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003364183.1\|4741061_4741523_+	hypothetical protein	NA	NA	NA	NA
WP_041924853.1\|4741775_4742201_+	DUF1493 family protein	NA	NA	NA	NA
WP_011169468.1\|4742282_4743668_-\|tail	tail tape measure protein, truncated	A0A059VA35	Pseudomonas_phage	9.6e-76	81.7
WP_004666928.1\|4743898_4745158_-\|transposase	IS256-like element ISPsy17 family transposase	A0A218MNI5	uncultured_virus	1.7e-42	41.7
WP_004656703.1\|4745269_4745704_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011169469.1\|4746077_4748348_+	catalase/peroxidase HPI	NA	NA	NA	NA
WP_011169470.1\|4748431_4749736_-	PAS domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	7.0e-12	58.7
WP_004656707.1\|4749832_4750141_-	hypothetical protein	NA	NA	NA	NA
WP_011169471.1\|4750297_4751476_-	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	8.0e-140	72.2
WP_011169472.1\|4753199_4754180_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_004656719.1\|4754176_4755169_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.4e-14	29.3
WP_004656720.1\|4755165_4756029_-	ABC transporter permease	NA	NA	NA	NA
WP_011169473.1\|4756025_4756973_-	ABC transporter permease	NA	NA	NA	NA
WP_004656728.1\|4757312_4758077_+	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_011169474.1\|4758171_4759095_+	proline iminopeptidase-family hydrolase	NA	NA	NA	NA
WP_005780873.1\|4759362_4760988_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	8.1e-58	41.5
WP_011169475.1\|4761204_4761834_+	response regulator transcription factor	NA	NA	NA	NA
WP_041924630.1\|4761880_4763470_+	hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	5.6e-11	23.5
WP_005754199.1\|4763517_4763949_-	hypothetical protein	NA	NA	NA	NA
WP_041924631.1\|4764244_4765513_-	membrane protein	NA	NA	NA	NA
WP_041924632.1\|4765844_4766345_+	GAF domain-containing protein	NA	NA	NA	NA
WP_004666228.1\|4766358_4766814_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004666229.1\|4767112_4768936_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004666230.1\|4769027_4769813_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_002555178.1\|4770032_4770233_+	hypothetical protein	NA	NA	NA	NA
WP_004656748.1\|4770484_4770679_-	hypothetical protein	NA	NA	NA	NA
WP_002555179.1\|4770868_4771108_-	hypothetical protein	NA	NA	NA	NA
WP_116818352.1\|4771285_4771372_+	DUF1534 domain-containing protein	NA	NA	NA	NA
WP_011169481.1\|4771364_4772918_-	galactarate dehydratase	NA	NA	NA	NA
WP_011169482.1\|4772928_4774314_-	MFS transporter	NA	NA	NA	NA
WP_004656752.1\|4774477_4775389_-	5-dehydro-4-deoxyglucarate dehydratase	NA	NA	NA	NA
WP_011169483.1\|4775685_4776435_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_004666233.1\|4776533_4778267_-	ABC transporter ATP-binding protein/permease	NA	NA	NA	NA
WP_002555185.1\|4778356_4778920_-	response regulator transcription factor	NA	NA	NA	NA
WP_011169484.1\|4778931_4780176_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_004656764.1\|4780368_4781082_+	SIMPL domain-containing protein	NA	NA	NA	NA
WP_004656766.1\|4781218_4782826_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004666235.1\|4783082_4784711_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011169487.1\|4785045_4786638_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004656773.1\|4786793_4788209_+	OprD family porin	NA	NA	NA	NA
WP_011169488.1\|4788291_4789887_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002555193.1\|4789961_4790972_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_002555194.1\|4790982_4791894_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_011169490.1\|4791904_4792873_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-18	33.0
WP_003379694.1\|4792872_4793847_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.4e-19	31.4
WP_004663377.1\|4793980_4795240_-\|transposase	IS256-like element ISPsy17 family transposase	A0A218MNI5	uncultured_virus	1.7e-42	41.7
WP_004667387.1\|4795343_4797866_-	flavodoxin	NA	NA	NA	NA
WP_004667385.1\|4799363_4800623_+\|transposase	IS256-like element ISPsy17 family transposase	A0A218MNI5	uncultured_virus	1.7e-42	41.7

DBSCAN-SWA_11

4804991 : 4858076

Klosneuvirus(28.57%)

integrase,transposase

attL 4790773:4790790|attR 4874000:4874017

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4790773:4790790	attL	NA	NA	NA	NA
WP_004663854.1\|4804991_4806095_-\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_011169494.1\|4806733_4807891_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_004661100.1\|4807887_4808541_-	ABC transporter permease	NA	NA	NA	NA
WP_004666241.1\|4808554_4809448_-	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003379713.1\|4809462_4810176_-	ABC transporter permease	NA	NA	NA	NA
WP_004655493.1\|4810520_4812104_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	8.0e-10	30.9
WP_002555214.1\|4812360_4812603_+	hypothetical protein	NA	NA	NA	NA
WP_041924635.1\|4812682_4813300_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_005733678.1\|4813453_4813762_-	hypothetical protein	NA	NA	NA	NA
WP_041924636.1\|4813870_4814308_-	TIGR00645 family protein	NA	NA	NA	NA
WP_004663854.1\|4814345_4815449_+\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_161936603.1\|4815673_4815970_-	hypothetical protein	NA	NA	NA	NA
WP_041924637.1\|4816188_4818624_-	ATP-binding protein	NA	NA	NA	NA
WP_002555221.1\|4818899_4819388_+	DUF3015 domain-containing protein	NA	NA	NA	NA
WP_011169500.1\|4819460_4821314_+	DUF4105 domain-containing protein	NA	NA	NA	NA
WP_004666245.1\|4821449_4821803_+	hypothetical protein	NA	NA	NA	NA
WP_004655509.1\|4821873_4822371_+	elongation factor GreAB	NA	NA	NA	NA
WP_011169501.1\|4822437_4824129_-	energy-dependent translational throttle protein EttA	A0A1V0SKJ1	Klosneuvirus	5.9e-43	28.2
WP_003379733.1\|4824276_4825539_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_003379735.1\|4825538_4827137_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_003379738.1\|4827120_4829355_+	hypothetical protein	NA	NA	NA	NA
WP_003379740.1\|4829357_4829756_+	hypothetical protein	NA	NA	NA	NA
WP_011169502.1\|4830173_4830983_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	3.5e-30	38.8
WP_080032886.1\|4830879_4831428_+	hypothetical protein	NA	NA	NA	NA
WP_003381684.1\|4832004_4832598_-	hypothetical protein	NA	NA	NA	NA
WP_003381686.1\|4832654_4833899_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_003381687.1\|4834033_4835251_-	hypothetical protein	NA	NA	NA	NA
WP_003381688.1\|4835410_4836016_-	adenylyl-sulfate kinase	NA	NA	NA	NA
WP_011169503.1\|4836138_4837404_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_003381690.1\|4837463_4838561_-	hypothetical protein	D5GV78	Campylobacter_virus	5.0e-27	28.2
WP_003381691.1\|4838664_4839447_-	HAD-IIA family hydrolase	NA	NA	NA	NA
WP_003381692.1\|4839443_4841057_-	hypothetical protein	NA	NA	NA	NA
WP_003381693.1\|4841053_4841545_-	hypothetical protein	NA	NA	NA	NA
WP_003381695.1\|4841668_4842733_-	hypothetical protein	NA	NA	NA	NA
WP_003381696.1\|4842801_4844733_-	pyruvate, phosphate dikinase	A0A1V0SGR7	Hokovirus	1.9e-05	23.7
WP_003381698.1\|4844813_4845374_-	dCTP deaminase	R4T945	Halovirus	7.7e-08	28.6
WP_003381701.1\|4845370_4845889_-	hypothetical protein	NA	NA	NA	NA
WP_003381702.1\|4845936_4846920_-	fatty acid desaturase family protein	NA	NA	NA	NA
WP_003381703.1\|4846925_4848062_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_003381704.1\|4848065_4848530_-	cyclase	NA	NA	NA	NA
WP_017698917.1\|4848517_4849810_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	2.6e-11	24.7
WP_011169506.1\|4849806_4850352_-	hypothetical protein	NA	NA	NA	NA
WP_003381708.1\|4850362_4851271_-	hypothetical protein	NA	NA	NA	NA
WP_003381711.1\|4851634_4852681_-	hypothetical protein	NA	NA	NA	NA
WP_003381713.1\|4852686_4853907_-	hypothetical protein	NA	NA	NA	NA
WP_011169508.1\|4853975_4855328_-	hypothetical protein	NA	NA	NA	NA
WP_011169509.1\|4855784_4856768_+	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_011169510.1\|4857002_4858076_+\|transposase	IS630-like element ISPsy25 family transposase	NA	NA	NA	NA
4874000:4874017	attR	NA	NA	NA	NA

DBSCAN-SWA_12

5241995 : 5310663

Bacillus_virus(22.22%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004663854.1\|5241995_5243099_-\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_054072986.1\|5243259_5244837_+	ATP-binding protein	NA	NA	NA	NA
WP_041924867.1\|5244870_5245428_-	hypothetical protein	A0A2H4J2S5	uncultured_Caudovirales_phage	2.3e-65	71.2
WP_011169694.1\|5247918_5248734_+	formate/nitrite transporter family protein	NA	NA	NA	NA
WP_004660086.1\|5248906_5249482_-	LysE family translocator	NA	NA	NA	NA
WP_004660084.1\|5249531_5250368_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_004660081.1\|5250968_5251220_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011169697.1\|5251239_5251944_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_081002637.1\|5255497_5256484_+	Fic family protein	A0A1V0E025	Clostridioides_phage	2.2e-10	29.8
WP_004654731.1\|5257232_5258300_+	FUSC family protein	NA	NA	NA	NA
WP_002555556.1\|5258310_5258772_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_041924660.1\|5258922_5260602_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_011169701.1\|5260616_5261411_+	carbon-nitrogen hydrolase family protein	M1HHT1	Paramecium_bursaria_Chlorella_virus	2.1e-11	32.1
WP_004663414.1\|5261593_5263903_+	pyrroloquinoline quinone biosynthesis protein PqqF	A0A2H4UVM3	Bodo_saltans_virus	5.2e-18	27.6
WP_003422658.1\|5264038_5264113_+	pyrroloquinoline quinone precursor peptide PqqA	NA	NA	NA	NA
WP_004654742.1\|5264201_5265113_+	pyrroloquinoline quinone biosynthesis protein PqqB	NA	NA	NA	NA
WP_002555561.1\|5265121_5265877_+	pyrroloquinoline-quinone synthase PqqC	NA	NA	NA	NA
WP_004654744.1\|5265873_5266158_+	pyrroloquinoline quinone biosynthesis peptide chaperone PqqD	NA	NA	NA	NA
WP_004654746.1\|5266150_5267320_+	pyrroloquinoline quinone biosynthesis protein PqqE	NA	NA	NA	NA
WP_011169703.1\|5267282_5269109_+	S9 family peptidase	NA	NA	NA	NA
WP_002555565.1\|5269193_5269355_-	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_011169705.1\|5269759_5271538_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_011169706.1\|5271710_5273009_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_138858483.1\|5273447_5274551_+\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_011169707.1\|5274567_5276373_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_004654758.1\|5276722_5277019_-	hypothetical protein	NA	NA	NA	NA
WP_004654760.1\|5277173_5277854_-	dethiobiotin synthase	NA	NA	NA	NA
WP_011169708.1\|5277884_5278694_-	malonyl-ACP O-methyltransferase BioC	NA	NA	NA	NA
WP_004654764.1\|5278686_5279418_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_011169709.1\|5279410_5280601_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
WP_011169710.1\|5280665_5281724_-	biotin synthase BioB	NA	NA	NA	NA
WP_011169711.1\|5281813_5282548_+	ComF family protein	NA	NA	NA	NA
WP_011169713.1\|5283541_5285458_+	PhoX family phosphatase	NA	NA	NA	NA
WP_011169714.1\|5285729_5286563_-	phosphodiesterase	NA	NA	NA	NA
WP_004654779.1\|5286587_5287619_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.4e-28	35.0
WP_011169715.1\|5287615_5288410_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_011169716.1\|5288406_5289282_-	ABC transporter permease	NA	NA	NA	NA
WP_004654786.1\|5289281_5290283_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_041924661.1\|5290266_5291286_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_002555585.1\|5291480_5292455_+	serine/threonine protein kinase	NA	NA	NA	NA
WP_110766069.1\|5292379_5292544_-	DUF1534 domain-containing protein	NA	NA	NA	NA
WP_004663394.1\|5292676_5293564_+	EamA family transporter RarD	NA	NA	NA	NA
WP_004654792.1\|5293787_5294306_-	glycine cleavage system protein R	NA	NA	NA	NA
WP_004654794.1\|5294627_5296805_+	malate synthase G	NA	NA	NA	NA
WP_004663377.1\|5296944_5298204_-\|transposase	IS256-like element ISPsy17 family transposase	A0A218MNI5	uncultured_virus	1.7e-42	41.7
WP_004663379.1\|5298466_5299666_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	2.9e-12	27.7
WP_004655932.1\|5299715_5300573_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_004655930.1\|5300823_5301456_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_011169725.1\|5301507_5304528_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_002555603.1\|5304524_5304821_-	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_002555602.1\|5304836_5306087_-	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
WP_004655925.1\|5306104_5307358_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.2e-101	53.7
WP_004655920.1\|5307627_5308806_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-25	36.4
WP_002555599.1\|5308802_5309648_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_004655916.1\|5309715_5310663_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA

DBSCAN-SWA_13

5496607 : 5583908

Pseudomonas_phage(52.94%)

lysis,integrase,head,capsid,tail,transposase,terminase,tRNA

attL 5497636:5497695|attR 5581321:5581412

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004663854.1\|5496607_5497711_-\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
5497636:5497695	attL	NA	NA	NA	NA
WP_004663854.1\|5497788_5498892_-\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_002555770.1\|5499011_5499227_-	TOBE domain-containing protein	NA	NA	NA	NA
WP_004655048.1\|5499253_5500066_-	aliphatic sulfonates ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.0e-28	35.1
WP_011169794.1\|5500062_5500860_-	aliphatic sulfonate ABC transporter permease SsuC	NA	NA	NA	NA
WP_002555773.1\|5500888_5501854_-	sulfonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004655053.1\|5502301_5502940_-	peroxiredoxin	NA	NA	NA	NA
WP_054088568.1\|5503109_5504471_-	OprD family porin	NA	NA	NA	NA
WP_004655058.1\|5505241_5506219_+	taurine ABC transporter substrate-binding protein	G3M9Z0	Bacillus_virus	2.5e-06	30.2
WP_004655059.1\|5506244_5507030_+	taurine ABC transporter ATP-binding subunit	G3M9Y6	Bacillus_virus	1.5e-30	35.9
WP_041924878.1\|5507077_5507902_+	taurine ABC transporter permease TauC	NA	NA	NA	NA
WP_004655063.1\|5508248_5508689_-	hypothetical protein	NA	NA	NA	NA
WP_004655065.1\|5508687_5509143_+\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_002551468.1\|5509212_5509701_-	protein-export chaperone SecB	NA	NA	NA	NA
WP_004655067.1\|5509741_5509993_-	glutaredoxin 3	V9QKN6	Rhizobium_phage	1.8e-12	39.7
WP_002551466.1\|5509995_5510409_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_002551465.1\|5510565_5512098_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_029240926.1\|5512251_5513574_+	murein hydrolase activator EnvC	NA	NA	NA	NA
WP_054073188.1\|5513607_5514945_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	1.0e-26	29.8
WP_004655075.1\|5514948_5515731_+	divergent polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_011169797.1\|5515785_5516211_-	antitoxin	Q7Y3V7	Yersinia_phage	4.2e-22	41.3
WP_004663214.1\|5516990_5517746_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002551458.1\|5517931_5518702_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_002551457.1\|5518721_5519459_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_002551456.1\|5519566_5519827_-	DUF2164 domain-containing protein	NA	NA	NA	NA
WP_002551455.1\|5519831_5520470_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_002551454.1\|5520469_5521063_-	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_011169800.1\|5521155_5522355_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_110766042.1\|5522428_5522512_-	DUF1534 domain-containing protein	NA	NA	NA	NA
WP_002555774.1\|5522622_5524284_-	OFA family MFS transporter	NA	NA	NA	NA
WP_011169802.1\|5524712_5526938_+	AsmA family protein	NA	NA	NA	NA
WP_004655089.1\|5527034_5528102_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_002555777.1\|5528098_5528371_+	oxidative damage protection protein	NA	NA	NA	NA
WP_004666928.1\|5528869_5530129_-\|transposase	IS256-like element ISPsy17 family transposase	A0A218MNI5	uncultured_virus	1.7e-42	41.7
WP_004655093.1\|5530456_5530735_+	hypothetical protein	NA	NA	NA	NA
WP_004663222.1\|5531048_5532395_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.5e-20	41.9
WP_004655099.1\|5532536_5533022_+	hypothetical protein	NA	NA	NA	NA
WP_004663235.1\|5533069_5534461_-	GABA permease	NA	NA	NA	NA
WP_011169804.1\|5534986_5535760_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-19	32.0
WP_011169805.1\|5535773_5536538_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002555785.1\|5537295_5537985_+	ABC transporter permease	NA	NA	NA	NA
WP_004655114.1\|5537986_5539258_+	methyltransferase	NA	NA	NA	NA
WP_004655116.1\|5539553_5539877_-	hypothetical protein	NA	NA	NA	NA
WP_004654112.1\|5540309_5541323_-	DnaJ domain-containing protein	A0A2K9L1L4	Tupanvirus	1.8e-07	43.1
WP_041924879.1\|5543283_5543532_+	hypothetical protein	NA	NA	NA	NA
WP_041924663.1\|5544894_5545866_-	hypothetical protein	A0A0U4IBV2	Pseudomonas_phage	3.0e-124	66.1
WP_041924664.1\|5545850_5546549_-	hypothetical protein	A0A2I7RNK1	Vibrio_phage	1.2e-37	38.3
WP_011169810.1\|5546545_5547076_-	hypothetical protein	A0A0U4J942	Pseudomonas_phage	3.6e-47	56.7
WP_011169811.1\|5547072_5547999_-	hypothetical protein	NA	NA	NA	NA
WP_041924665.1\|5547995_5548595_-\|tail	tail protein	B5TK82	Pseudomonas_phage	2.3e-18	41.7
WP_011169813.1\|5548595_5551040_-\|tail	phage tail protein	A0A0U4K5K2	Pseudomonas_phage	1.5e-119	59.9
WP_011169814.1\|5551048_5551573_-\|tail	phage tail protein	A0A0U4JVX3	Pseudomonas_phage	2.9e-73	75.9
WP_011169815.1\|5551569_5552739_-	hypothetical protein	A0A0U4JJ14	Pseudomonas_phage	6.0e-156	70.8
WP_003342289.1\|5552735_5553053_-	DUF2590 family protein	A0A0U4B0N5	Pseudomonas_phage	1.3e-36	78.4
WP_011169816.1\|5553052_5555353_-\|tail	phage tail tape measure protein	A0A0U4IJ81	Pseudomonas_phage	1.1e-116	42.7
WP_005737178.1\|5555358_5555502_-	hypothetical protein	A0A0U4B0S4	Pseudomonas_phage	3.7e-15	76.1
WP_003342295.1\|5555522_5555813_-	hypothetical protein	A0A0U4B0P2	Pseudomonas_phage	1.1e-21	64.4
WP_011169817.1\|5555846_5556326_-\|lysis	lysis protein	A0A0U4JXC2	Pseudomonas_phage	2.1e-22	50.8
WP_011169818.1\|5556322_5556850_-	lysozyme	NA	NA	NA	NA
WP_004415377.1\|5556846_5557053_-	hypothetical protein	NA	NA	NA	NA
WP_005743482.1\|5557052_5557262_-	TraR/DksA family transcriptional regulator	NA	NA	NA	NA
WP_003342306.1\|5557261_5557714_-	DUF2597 family protein	A0A0U3TH58	Pseudomonas_phage	7.2e-57	72.8
WP_011169819.1\|5557717_5558830_-	DUF2586 family protein	A0A0U4KLE6	Pseudomonas_phage	4.3e-135	66.3
WP_011169820.1\|5558844_5559513_-	virion morphogenesis protein	A0A0U4ISN1	Pseudomonas_phage	2.9e-54	55.2
WP_004415364.1\|5559502_5559946_-\|tail	tail protein	A0A0U4IBS7	Pseudomonas_phage	3.2e-49	64.4
WP_011169821.1\|5559942_5560404_-\|head	head completion/stabilization protein	A0A0U4J933	Pseudomonas_phage	1.9e-44	60.8
WP_041924666.1\|5560502_5561225_-\|terminase	terminase	A0A0U4JEJ1	Pseudomonas_phage	3.9e-81	69.8
WP_041924667.1\|5561221_5562214_-\|capsid	phage major capsid protein, P2 family	A0A0U4K5I9	Pseudomonas_phage	5.9e-120	67.9
WP_041924668.1\|5563585_5563876_+	hypothetical protein	NA	NA	NA	NA
WP_011169825.1\|5563972_5564206_+	hypothetical protein	NA	NA	NA	NA
WP_005737208.1\|5564282_5564495_+	hypothetical protein	NA	NA	NA	NA
WP_011169826.1\|5564491_5565640_+\|integrase	integrase	V9IQN0	Stenotrophomonas_phage	9.7e-74	40.7
WP_041924881.1\|5565919_5566441_+	SocA family protein	NA	NA	NA	NA
WP_041924669.1\|5567057_5567657_-	hypothetical protein	NA	NA	NA	NA
WP_116818403.1\|5568355_5568793_+	DUF4145 domain-containing protein	NA	NA	NA	NA
WP_005621643.1\|5569016_5569463_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011169830.1\|5569740_5570988_+	maturase	A0A1I9KFG3	Aeromonas_phage	1.1e-09	28.3
WP_024421063.1\|5571057_5571693_-	SLATT domain-containing protein	NA	NA	NA	NA
WP_011169831.1\|5571893_5573330_-	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_011169832.1\|5573712_5574207_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_011169833.1\|5574554_5575199_-	hypothetical protein	NA	NA	NA	NA
WP_011169834.1\|5575292_5576087_-	DNA adenine methylase	C7BGE1	Burkholderia_phage	8.4e-101	65.4
WP_005737208.1\|5577696_5577909_+	hypothetical protein	NA	NA	NA	NA
WP_011169836.1\|5577905_5579054_+\|integrase	integrase	V9IQN0	Stenotrophomonas_phage	9.7e-74	40.5
WP_041924673.1\|5579210_5579528_-	hypothetical protein	NA	NA	NA	NA
WP_011169837.1\|5579842_5580343_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_041924674.1\|5580367_5580895_+	DUF2778 domain-containing protein	NA	NA	NA	NA
WP_041924675.1\|5580894_5581185_+	hypothetical protein	NA	NA	NA	NA
WP_004665467.1\|5582927_5583908_+\|transposase	IS5-like element ISPsy2 family transposase	Q38213	Escherichia_phage	1.9e-94	55.9
5581321:5581412	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP041755

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

49054 : 85225

Shigella_phage(16.67%)

transposase,integrase

attL 57032:57091|attR 87773:88954

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086004872.1\|49054_50204_+\|transposase	IS3-like element ISPsy29 family transposase	U5P429	Shigella_phage	5.7e-98	63.0
WP_011282438.1\|50391_51390_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011282422.1\|51641_52379_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_011282475.1\|52412_54908_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_011282491.1\|54900_55350_+	invasin protein AfaD	NA	NA	NA	NA
WP_054073162.1\|55424_55985_+	hypothetical protein	NA	NA	NA	NA
57032:57091	attL	NA	NA	NA	NA
WP_004663854.1\|57093_58197_+\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_011282469.1\|58483_59119_+	recombinase family protein	M9Q1K0	Clostridium_phage	2.4e-05	30.3
WP_002556028.1\|59296_59485_+	hypothetical protein	NA	NA	NA	NA
WP_002556029.1\|59484_59766_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_041924905.1\|59917_61465_-	glycoside hydrolase family 28 protein	NA	NA	NA	NA
WP_041924893.1\|61548_61773_-	carbon storage regulator	NA	NA	NA	NA
WP_004661237.1\|61876_62059_-	hypothetical protein	NA	NA	NA	NA
WP_081002620.1\|62488_62803_-	hypothetical protein	NA	NA	NA	NA
WP_011282457.1\|62901_63186_-	type III effector HopW1-1, truncated	NA	NA	NA	NA
WP_005760341.1\|64073_64523_-	hypothetical protein	NA	NA	NA	NA
WP_041924899.1\|66650_68264_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	3.1e-41	35.1
WP_004663854.1\|68690_69794_-\|transposase	IS5-like element ISPsy19 family transposase	NA	NA	NA	NA
WP_050772300.1\|72698_73778_-\|transposase	IS110-like element ISPsy16 family transposase	NA	NA	NA	NA
WP_011282487.1\|75709_76375_-	hypothetical protein	NA	NA	NA	NA
WP_086004858.1\|76893_78116_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.6e-105	68.5
WP_050772301.1\|78408_78711_+	hypothetical protein	NA	NA	NA	NA
WP_011282502.1\|78667_79993_+	hypothetical protein	Q38324	Lactococcus_phage	2.2e-05	30.6
WP_134933068.1\|80008_80833_+	hypothetical protein	NA	NA	NA	NA
WP_054072957.1\|80850_81813_-\|integrase	tyrosine-type recombinase/integrase	A0A0U4IA68	Gordonia_phage	1.6e-16	29.2
WP_004662018.1\|82144_82393_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_004666861.1\|82405_82756_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_011168770.1\|84190_85225_+\|transposase	IS110-like element ISPsy16 family transposase	NA	NA	NA	NA
87773:88954	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP041754

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP041755

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection