Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
---|---|---|---|---|---|---|---|
NZ_CP053417 | Salmonella bongori strain 92-0238 chromosome, complete genome | 4 crisprs | DEDDh,RT,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,csa3,DinG | 0 | 13 | 1 | 0 |
CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NZ_CP053417_1 | 2697430-2698492 | TypeI-E |
I-E
Consensus repeat of NZ_CP053417_1
|
17 spacers
spacers of NZ_CP053417_1
>1.1|2697459|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT CAAAACTGGTTTGTTTCGCGTGTAGTCCGCCC >1.2|2697520|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT TCACAACATAGCCGCCTTCCGGCGCTGGTACT >1.3|2697581|33|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT TGTACGTTCTGTCGCGCACCGGAGACGGCGCGC >1.4|2697643|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT ATTATGGATATATTCAGCGATATACTAACGGA >1.5|2697704|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT TGGGTATGAATGACCACCGCCAGCGTCAACTG >1.6|2697765|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT TCTGGTCATAACATCGCAGCAAAATCAAAAGA >1.7|2697826|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT GAATTATTCCGGCAATTGGGACACCATTATGG >1.8|2697887|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT TCACCTGACGCTATTAATATTGATGTCGATGG >1.9|2697948|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT ACGCTGGCCGAAAACGGATTTTCAATCCGCAT >1.10|2698009|28|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT CGAGGATAGTTGTACCAGGTCAGGCCAG >1.11|2698066|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT CTGTCAAACTGGATCCCCCTCATCATCATTGC >1.12|2698127|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT CCGGCGATGCGAAGAGCTGCCGTCACAATTCC >1.13|2698188|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT TGCTTCGGTGTGGGATTGTTCAACATGCGCGG >1.14|2698249|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT AAGAGATTAAAAATTTATGCGAAGGAGTTGGG >1.15|2698310|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT AATAAATGTTTCAGGCGGAAATAAAGCCGGGA >1.16|2698371|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT AATAAATGTTTCAGGCGGAAATAAAGCCGGGA >1.17|2698432|32|NZ_CP053417|CRISPRCasFinder,CRT ACGACGTCACTAACCGAATTTACAACCTTGGC |
cas3,cas8e,cse2gr11,cas7 |
CRISPR arrays and Neighbor proteins around NZ_CP053417_1
The CRISPR arrays of NZ_CP053417_1 >merge|NZ_CP053417|1|2697430-2698492|PILER-CR,CRISPRCasFinder,CRT GTGTTCCCCGCGCCAGCGGGGATAAACCGCAAAACTGGTTTGTTTCGCGTGTAGTCCGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTCACAACATAGCCGCCTTCCGGCGCTGGTACTGTGTTCCCCGCGCCAGCGGGGATAAACCGTGTACGTTCTGTCGCGCACCGGAGACGGCGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTATGGATATATTCAGCGATATACTAACGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGGTATGAATGACCACCGCCAGCGTCAACTGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTGGTCATAACATCGCAGCAAAATCAAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGAATTATTCCGGCAATTGGGACACCATTATGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCACCTGACGCTATTAATATTGATGTCGATGGGTGTTCCCCGCGCCAGCGGGGATAAACCGACGCTGGCCGAAAACGGATTTTCAATCCGCATGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAGGATAGTTGTACCAGGTCAGGCCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGTCAAACTGGATCCCCCTCATCATCATTGCGTGTTCCCCGCGCCAGCGGGAATAAACCGCCGGCGATGCGAAGAGCTGCCGTCACAATTCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCTTCGGTGTGGGATTGTTCAACATGCGCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGAAGAGATTAAAAATTTATGCGAAGGAGTTGGGGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAAATGTTTCAGGCGGAAATAAAGCCGGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAAATGTTTCAGGCGGAAATAAAGCCGGGAGTGTTCCCCGCGTCAGCGGGGATAAACCGACGACGTCACTAACCGAATTTACAACCTTGGCGTGTTCCCCGCGCCAGCGGGGATAAATCG >NZ_CP053417|1|1|2697430-2698431|PILER-CR GTGTTCCCCGCGCCAGCGGGGATAAACCG CAAAACTGGTTTGTTTCGCGTGTAGTCCGCCC GTGTTCCCCGCGCCAGCGGGGATAAACCG TCACAACATAGCCGCCTTCCGGCGCTGGTACT GTGTTCCCCGCGCCAGCGGGGATAAACCG TGTACGTTCTGTCGCGCACCGGAGACGGCGCGC GTGTTCCCCGCGCCAGCGGGGATAAACCG ATTATGGATATATTCAGCGATATACTAACGGA GTGTTCCCCGCGCCAGCGGGGATAAACCG TGGGTATGAATGACCACCGCCAGCGTCAACTG GTGTTCCCCGCGCCAGCGGGGATAAACCG TCTGGTCATAACATCGCAGCAAAATCAAAAGA GTGTTCCCCGCGCCAGCGGGGATAAACCG GAATTATTCCGGCAATTGGGACACCATTATGG GTGTTCCCCGCGCCAGCGGGGATAAACCG TCACCTGACGCTATTAATATTGATGTCGATGG GTGTTCCCCGCGCCAGCGGGGATAAACCG ACGCTGGCCGAAAACGGATTTTCAATCCGCAT GTGTTCCCCGCGCCAGCGGGGATAAACCG CGAGGATAGTTGTACCAGGTCAGGCCAG GTGTTCCCCGCGCCAGCGGGGATAAACCG CTGTCAAACTGGATCCCCCTCATCATCATTGC GTGTTCCCCGCGCCAGCGGGAATAAACCG CCGGCGATGCGAAGAGCTGCCGTCACAATTCC GTGTTCCCCGCGCCAGCGGGGATAAACCG TGCTTCGGTGTGGGATTGTTCAACATGCGCGG GTGTTCCCCGCGCCAGCGGGGATAAACCG AAGAGATTAAAAATTTATGCGAAGGAGTTGGG GTGTTCCCCGCGCCAGCGGGGATAAACCG AATAAATGTTTCAGGCGGAAATAAAGCCGGGA GTGTTCCCCGCGCCAGCGGGGATAAACCG AATAAATGTTTCAGGCGGAAATAAAGCCGGGA GTGTTCCCCGCGTCAGCGGGGATAAACCG >NZ_CP053417|1|1|2697430-2698492|CRISPRCasFinder GTGTTCCCCGCGCCAGCGGGGATAAACCG CAAAACTGGTTTGTTTCGCGTGTAGTCCGCCC GTGTTCCCCGCGCCAGCGGGGATAAACCG TCACAACATAGCCGCCTTCCGGCGCTGGTACT GTGTTCCCCGCGCCAGCGGGGATAAACCG TGTACGTTCTGTCGCGCACCGGAGACGGCGCGC GTGTTCCCCGCGCCAGCGGGGATAAACCG ATTATGGATATATTCAGCGATATACTAACGGA GTGTTCCCCGCGCCAGCGGGGATAAACCG TGGGTATGAATGACCACCGCCAGCGTCAACTG GTGTTCCCCGCGCCAGCGGGGATAAACCG TCTGGTCATAACATCGCAGCAAAATCAAAAGA GTGTTCCCCGCGCCAGCGGGGATAAACCG GAATTATTCCGGCAATTGGGACACCATTATGG GTGTTCCCCGCGCCAGCGGGGATAAACCG TCACCTGACGCTATTAATATTGATGTCGATGG GTGTTCCCCGCGCCAGCGGGGATAAACCG ACGCTGGCCGAAAACGGATTTTCAATCCGCAT GTGTTCCCCGCGCCAGCGGGGATAAACCG CGAGGATAGTTGTACCAGGTCAGGCCAG GTGTTCCCCGCGCCAGCGGGGATAAACCG CTGTCAAACTGGATCCCCCTCATCATCATTGC GTGTTCCCCGCGCCAGCGGGAATAAACCG CCGGCGATGCGAAGAGCTGCCGTCACAATTCC GTGTTCCCCGCGCCAGCGGGGATAAACCG TGCTTCGGTGTGGGATTGTTCAACATGCGCGG GTGTTCCCCGCGCCAGCGGGGATAAACCG AAGAGATTAAAAATTTATGCGAAGGAGTTGGG GTGTTCCCCGCGCCAGCGGGGATAAACCG AATAAATGTTTCAGGCGGAAATAAAGCCGGGA GTGTTCCCCGCGCCAGCGGGGATAAACCG AATAAATGTTTCAGGCGGAAATAAAGCCGGGA GTGTTCCCCGCGTCAGCGGGGATAAACCG ACGACGTCACTAACCGAATTTACAACCTTGGC GTGTTCCCCGCGCCAGCGGGGATAAATCG >NZ_CP053417|1|1|2697430-2698492|CRT GTGTTCCCCGCGCCAGCGGGGATAAACCG CAAAACTGGTTTGTTTCGCGTGTAGTCCGCCC GTGTTCCCCGCGCCAGCGGGGATAAACCG TCACAACATAGCCGCCTTCCGGCGCTGGTACT GTGTTCCCCGCGCCAGCGGGGATAAACCG TGTACGTTCTGTCGCGCACCGGAGACGGCGCGC GTGTTCCCCGCGCCAGCGGGGATAAACCG ATTATGGATATATTCAGCGATATACTAACGGA GTGTTCCCCGCGCCAGCGGGGATAAACCG TGGGTATGAATGACCACCGCCAGCGTCAACTG GTGTTCCCCGCGCCAGCGGGGATAAACCG TCTGGTCATAACATCGCAGCAAAATCAAAAGA GTGTTCCCCGCGCCAGCGGGGATAAACCG GAATTATTCCGGCAATTGGGACACCATTATGG GTGTTCCCCGCGCCAGCGGGGATAAACCG TCACCTGACGCTATTAATATTGATGTCGATGG GTGTTCCCCGCGCCAGCGGGGATAAACCG ACGCTGGCCGAAAACGGATTTTCAATCCGCAT GTGTTCCCCGCGCCAGCGGGGATAAACCG CGAGGATAGTTGTACCAGGTCAGGCCAG GTGTTCCCCGCGCCAGCGGGGATAAACCG CTGTCAAACTGGATCCCCCTCATCATCATTGC GTGTTCCCCGCGCCAGCGGGAATAAACCG CCGGCGATGCGAAGAGCTGCCGTCACAATTCC GTGTTCCCCGCGCCAGCGGGGATAAACCG TGCTTCGGTGTGGGATTGTTCAACATGCGCGG GTGTTCCCCGCGCCAGCGGGGATAAACCG AAGAGATTAAAAATTTATGCGAAGGAGTTGGG GTGTTCCCCGCGCCAGCGGGGATAAACCG AATAAATGTTTCAGGCGGAAATAAAGCCGGGA GTGTTCCCCGCGCCAGCGGGGATAAACCG AATAAATGTTTCAGGCGGAAATAAAGCCGGGA GTGTTCCCCGCGTCAGCGGGGATAAACCG ACGACGTCACTAACCGAATTTACAACCTTGGC GTGTTCCCCGCGCCAGCGGGGATAAATCG
>NZ_CP053417.1|WP_001199954.1|2696467_2697139_+|7-carboxy-7-deazaguanine-synthase-QueE MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLEDREVSLYSILAKTKESDKWGAASSEDLLAVISRQGYTARHVVITGGEPCIHDLMPLTSLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYGVLYQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIDTCIARNWRLSMQTHKYLNIA >NZ_CP053417.1|WP_000036734.1|2694662_2695961_+|phosphopyruvate-hydratase MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA >NZ_CP053417.1|WP_000210866.1|2692942_2694580_+|CTP-synthase-(glutamine-hydrolyzing) MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLTDDSLVRQLYGAPTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEHQKRQAK >NZ_CP053417.1|WP_171923022.1|2691923_2692715_+|nucleoside-triphosphate-pyrophosphohydrolase MNQIDRLLNIMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNAICAAISDKLERRHPHVFGKISADSSEEVLTRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVIDQAKLEEEMGDLLFATVNMARHLGTKAEMALQKANDKFERRFREVERIVAARGLQMTGVDLETMEEVWQEVKRQEIDL >NZ_CP053417.1|WP_000226832.1|2689571_2691806_+|GTP-diphosphokinase MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRIDREHYIEEFVGHLRAEMKNEGVLAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGATSGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYITTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVTANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGN >NZ_CP053417.1|WP_171923021.1|2688224_2689520_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD MAQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHNGKALFIPGLLPEESADVIITEDKKQFARARVSRRLNDSPERELPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGEPWGYRRRARLSLNCPPDKSLQMGFRQAGSSDIVNVEQCPVLVPQLEALLPRVRACLASLQGTRHLGHVELVQAGNGTLMILRHTAPLSASDKEKLERFSHSEGLSLFLAPFSEILETVIGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAADRVLDLFCGMGNFTLPLATCAASVVGVEGVPALVEKARENAIRNELHNVTFFHENLEEDVTKQPWAKNGFDKVLIDPARAGAAGVMRHIIKLKPIRIVYVSCNPATLARDSEVLVNAGYEVTRLAMLDMFPHTGHLESMVLFERM >NZ_CP053417.1|WP_171923020.1|2685410_2688167_-|two-component-sensor-histidine-kinase-BarA MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKSTHNMLGYVALELDLKSVRLQQYKEIFISSVMMFFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTECLAGKRLAYIEPNATAAQCTLDLLNDTPVEVVYSPAFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLKHHAEPLLMDTSKIAMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGTNVTTRLMVPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPDGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSDVREEELEPEFLELLDEMDNVAREAKKILG >NZ_CP053417.1|WP_038392467.1|2684224_2685367_+|glycerate-kinase MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPMADGGEGTVEAMVEATAGRIVHVDVTGPLGHRVNAFYGLSGDARCAFIEMAAASGLEQVPLAQRDPLNTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDVQGNDIAQGGIGLEALASIDISGLDKRLSACRIDVACDVTNPLTGKEGASAIFGPQKGATPEMIERLDNALIRYAHLIARDLHVDVLGLVGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEERLADADLVITGEGRIDSQTLHGKVPIGVAGIAKRHNKPVIGIAGSLTADVGVVHGYGLDAVFSVIYTICTLEDALENAAENVRMTARNVAATLKAGQQLR >NZ_CP053417.1|WP_171923019.1|2682805_2684146_+|glucarate-dehydratase MSAQFTTPVVTSMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNAGHTGVGEIPGGEKIRKTLEEAIPLVVGKTLGEYKNVLTAVRNQFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPYQSQTEEKCDWYRLRHEEAMTPETVVRLAEAAYEKYGFSDFKLKGGVLAGEEEAESIVALAKRFPNARVTLDPNGAWSLNEAIQIGKYLKGTLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGMVQVPAKPGLGVEIDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR >NZ_CP053417.1|WP_171923673.1|2681444_2682785_+|glucarate-dehydratase MNTQSSPIITDMKVIPVAGHDSMLLNIGGAHNAWFTRNIVVLTDNAGHTGVGEAPGGDVIYQTLMDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGQALNVPVCELLGPGKQRDAVTVLGYLFYIGDRTKTDLPYLESTPGSHEWYRLRHQEALNSDAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDTVRALKKRFPEARITVDPNGAWRLDEAIALCKGLKDVLTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLTGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGKPTAIDTHWIWQEGDCRLTKNPLEIKNGAIAVPDAPGLGVELDWEQVQKAHDAYKKLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH >NZ_CP053417.1|WP_171923023.1|2698583_2699381_+|MBL-fold-metallo-hydrolase MALTIKVLLENHKAAGVDNALKARPGLSLLVQDESTSILFDTGPDDSFIQNASTMRIDLSDISAVVLSHGHYDHCGGVPWLPDNSRIICHPEMARERYAAITLPGMTRKIKKLSREGDYSRYRMVYTRDPMPISDKFIWSGEIPVAMPEAYGVFGGRDAEPDYISDEGVLIYKSEKGLVIITGCGHRGIANIVRHCQNITGINQLYALVGGFHLRCASPFTLWRVRRFLNEQKPEKLCGCHCTGTWGRLWLPEMIAPATGDVLHF >NZ_CP053417.1|WP_079793987.1|2699461_2699824_-|6-carboxytetrahydropterin-synthase-QueD MPTMLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLENPTSEVLAKWIWGQVKPVVPLLSAVQVKETCTAGCVYRGA >NZ_CP053417.1|WP_171923024.1|2700130_2701930_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit MTTQAPLTGLLPLNAEQLARLQAATTDLTPEQLAWVSGYFWGILNPRPDTITTLPAPVAEIPGVTLISASQTGNARRVAEALRDDLLAVNLNVTLVNAGDYKYKQIASEKLLVVVTSTQGEGEPPEEAVALHKFLFSKKAPALKNTAFAVFSLGDTSYEFFCQAGKDFDSKLAELGGKRLLERVDADVEYQSAAAQWRARMVEVLRSRTPVMTPAQSVTSGAVNEIHTSPYTKEAPLSASLAVNQKITGRNSEKDVRHIEIDLGDSGLCYQPGDALGVWYQNDPSLVNEIVELLWLKGDEPVTVNDKRQPLSEALQWHFELTVNTANIVETYATLTRSETLMPLVGDKTQLQRYAAATPIVDMLRFSPAQLEADALVGLLRPLTPRLYSIASSQAEVGNEAHITVGVVRYDIEGRARAGGASSFLADRVEEDGEVRVFIEHNDNFRLPEEPQTPVIMIGPGTGIAPFRAFMQQRAADGAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDLESADEYLSELRVARRYQRDVY >NZ_CP053417.1|WP_171923025.1|2701929_2703642_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit MSEKHPGPLVVEGKLSDAERMKRESNYLRGTIAEDLNDSLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVISTTQWKAIDKFAAENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAVAENGRLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGIDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIAGVPESEKTKIEKLARDHGLMNAVTAQRENAMACVSFPTCPLAMAEAERFLPTFIDKVEAIMASHGMSDEHIVLRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITESDILASLDELIGRWAKEREAGEGFGDFTVRAGIVRPVLDPARDFWE >NZ_CP053417.1|WP_001096609.1|2703725_2704460_+|phosphoadenosine-phosphosulfate-reductase MAKLSLSALNERPKVDRVLALAETNAALETLSAEERIVWALENLPGEYVLSSSFGIQAAVSLHLVNQVYPGIPVILTDTGYLFAETYQFIDELTEKLNLNLKVYRAKESAAWQEARYGKLWEQGIEGIEKYNDINKVEPLNRALHELSAQTWFAGLRREQSGSRATLPVLAIQRGVFKVLPIIDWDNRTVFQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG >NZ_CP053417.1|WP_171923026.1|2704550_2705504_-|SPI-1-type-III-secretion-system-effector-SopD MPVTLHFGNQQNYMLNESRLAQLLSADKEKATHKGYWNKLQDHFRSEKQDHALEVLHGMLYGHARNEPGEMEINVEGMSKIYAFKHLQRLACSADQDLFRIQMDASQTQLLFMIGDTVISQSSIQDTLNLSENAVVKSMDRAERELFLKICEMIGSTITWHADLLQGSASTLRKEVAGNAQIKEAVYKMMRPNEAPDHRLVEWRGSLTEKEESILACINADSFDIITQFCKLGYREVQSEVSFFMIHPCITYLLHSYSPITEFKETNTAFLNNFNQDYDNYHSNKRDIDPILEEIYLTHEHSLHIGKNNCSRNILML >NZ_CP053417.1|WP_171923674.1|2705938_2708602_+|CRISPR-associated-helicase-Cas3' MLIYHYWGKSRQGEASGGDDYHLLCWHSLDVAAVGYWMVKNNIYFIDHYLKKLGLQDNEQAAQFFAWILCWHDIGKFAHSFQQLYRHEDLNVFNEPPGHYEKIPHTTLGYWLWNTWLSECPELFPPSSLSVRKSKRVMTLWMPVTTGHHGRPPDAIPEVDHFRQQDKDAAREFLLKIKALFPLITLPEAWDEDEGIAQFQQLSWFISATVVLADWTGSASHYFPRMAEKMPVEMYWQQALIKARKAITLFPTAANVSAFTGIETLFPFIQHPTPLQQKALTLDIHVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANSWLALYQPDSRPSLVLAHSARHLMDRFNQSIWSASLSGTEEPDDASPYSQGCAAWFTDSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIECQASNGNATILLSATLSQQQRDKLVAAFSRGVKRSVQAPLLGHDDYPWLTQVTQNELISQHIDTRKEVERSVNIGWLHSEASCLEYIGEAVKKGNCIAWIRNSVDDAIRIYRQLLLSKTIAAENLLLFHSRFAFHDRQRIEMQTLDLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHLRDRSGLVKTNGLDEREVPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGAIRMPQSARLLIESVYGDDVDMPAGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDFLPEKMSTRLAEESITLWLAKVIDNVLIPYAPGEHPWEMSALRVRKSWWEKHNGEFERLEGESFHRWCVEQHQNKDFAIVIVVSDSAACGYSATEGLTGKMEA >NZ_CP053417.1|WP_171923027.1|2708613_2710170_+|type-I-E-CRISPR-associated-protein-Cse1/CasA MKSFSLLTSCWLPVRFKDGSMGKMAPVDLADENVVDIAATRADLQGAAWQFLLGVLQCSLAPKNSARWEDIWEDGLTEPMLREALAPLEHAFQFGAETPSFMQDFEPLTGEKVSIASLLPETPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQMYQGERQTPLWRKLWLNVMPQDAADLPLPAACDASVFPWLAATRTSEQASAITTPEHVNKLQAYWGMPRRIRLDFTTTQSGACDICGTNSDDLLSVMTVKNYGVNYDGWRHPLTPYRLPVKEGSGFFSVKPQPGGLIWRDWLGLSQENQTEANKEYPAQVVKVFNARRLKDVKAGLWGFGADFDNMKIRCWYEHHFPLLMTEGLMPDLRKTTQTAARLLSLLRSALKEAWFANAKDARGDFSFIDIDFWNLTQGDFLNLIRDLENGGEPDELLTKWRRELWLFTRRYFDDRVFTNPYESNDLKRIMTARKKYFTTSAEKQSAKAARAKKQEAAE >NZ_CP053417.1|WP_001028359.1|2710166_2710721_+|type-I-E-CRISPR-associated-protein-Cse2/CasB MNIVKDDHKATLRQWHEELQEKRGARASLRRSVTVNDVCLSEGFRSLLMQTHTLWKIEGQEWRFTALALTAAVAANVKTIDERQTFAAQLGQMTGNNPVMSERRFTRLSTVKTSDELLRQLRRAVKLLNGAVNLISLAEDIFRWCQEHDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEKV >NZ_CP053417.1|WP_171923028.1|2710734_2711790_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRTGRIAREAAQILMESGIDAKKAVEYVEKIASCFGKVKADKKAKDPLTNAETEQLVHISPAEFEAVKALAHRLAEEKRAPKEEELALLRHDRMAVDIAMFGRMLANKPDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRAASEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTEQPRSLAAAFYEPINGTDQLNVAVKRITALRENMNAVYAQETAFKDFNVMNQQGSMKDVLDFICA |
You can click texts colored in the table to view more detailed information
CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NZ_CP053417_2 | 2714373-2714829 | TypeI-E |
I-E
Consensus repeat of NZ_CP053417_2
|
7 spacers
spacers of NZ_CP053417_2
>2.1|2714402|33|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT TGATCAGCACCGCAGCTGGTGAGGCTACATTGC >2.2|2714464|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT CAGAAAAAGACGCATTGCGCGACCAGCTTTGC >2.3|2714525|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT TTACCGCATTATATCCATTTAATAATAGCGTG >2.4|2714586|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT CTCATTATCCCCGCAATTTATTTTGATGAGAC >2.5|2714647|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT CAATTTTTTTGTAATTTATTCCAGCCATATTA >2.6|2714708|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT TACTGCTCATATGCTTCATACATACCCACTAT >2.7|2714769|32|NZ_CP053417|CRISPRCasFinder,CRT CCTGTGTGCGTGCAACGGGTAACTAAGGGGAA |
cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3 |
CRISPR arrays and Neighbor proteins around NZ_CP053417_2
The CRISPR arrays of NZ_CP053417_2 >merge|NZ_CP053417|2|2714373-2714829|PILER-CR,CRISPRCasFinder,CRT GTGTTCCCCGCGCCAGCGGGGATAAACCGTGATCAGCACCGCAGCTGGTGAGGCTACATTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGAAAAAGACGCATTGCGCGACCAGCTTTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTACCGCATTATATCCATTTAATAATAGCGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCATTATCCCCGCAATTTATTTTGATGAGACGTGTTCCCCGCGCCAGCGGGGATAAACCGCAATTTTTTTGTAATTTATTCCAGCCATATTAGTGTTCCCCGCGCCAGCGGGGATAAACCGTACTGCTCATATGCTTCATACATACCCACTATGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTGTGTGCGTGCAACGGGTAACTAAGGGGAAGTGTTCCCCGCGTCAGCGGGGCTTTTACT >NZ_CP053417|2|2|2714373-2714768|PILER-CR GTGTTCCCCGCGCCAGCGGGGATAAACCG TGATCAGCACCGCAGCTGGTGAGGCTACATTGC GTGTTCCCCGCGCCAGCGGGGATAAACCG CAGAAAAAGACGCATTGCGCGACCAGCTTTGC GTGTTCCCCGCGCCAGCGGGGATAAACCG TTACCGCATTATATCCATTTAATAATAGCGTG GTGTTCCCCGCGCCAGCGGGGATAAACCG CTCATTATCCCCGCAATTTATTTTGATGAGAC GTGTTCCCCGCGCCAGCGGGGATAAACCG CAATTTTTTTGTAATTTATTCCAGCCATATTA GTGTTCCCCGCGCCAGCGGGGATAAACCG TACTGCTCATATGCTTCATACATACCCACTAT GTGTTCCCCGCGCCAGCGGGGATAAACCG >NZ_CP053417|2|2|2714373-2714829|CRISPRCasFinder GTGTTCCCCGCGCCAGCGGGGATAAACCG TGATCAGCACCGCAGCTGGTGAGGCTACATTGC GTGTTCCCCGCGCCAGCGGGGATAAACCG CAGAAAAAGACGCATTGCGCGACCAGCTTTGC GTGTTCCCCGCGCCAGCGGGGATAAACCG TTACCGCATTATATCCATTTAATAATAGCGTG GTGTTCCCCGCGCCAGCGGGGATAAACCG CTCATTATCCCCGCAATTTATTTTGATGAGAC GTGTTCCCCGCGCCAGCGGGGATAAACCG CAATTTTTTTGTAATTTATTCCAGCCATATTA GTGTTCCCCGCGCCAGCGGGGATAAACCG TACTGCTCATATGCTTCATACATACCCACTAT GTGTTCCCCGCGCCAGCGGGGATAAACCG CCTGTGTGCGTGCAACGGGTAACTAAGGGGAA GTGTTCCCCGCGTCAGCGGGGCTTTTACT >NZ_CP053417|2|2|2714373-2714829|CRT GTGTTCCCCGCGCCAGCGGGGATAAACCG TGATCAGCACCGCAGCTGGTGAGGCTACATTGC GTGTTCCCCGCGCCAGCGGGGATAAACCG CAGAAAAAGACGCATTGCGCGACCAGCTTTGC GTGTTCCCCGCGCCAGCGGGGATAAACCG TTACCGCATTATATCCATTTAATAATAGCGTG GTGTTCCCCGCGCCAGCGGGGATAAACCG CTCATTATCCCCGCAATTTATTTTGATGAGAC GTGTTCCCCGCGCCAGCGGGGATAAACCG CAATTTTTTTGTAATTTATTCCAGCCATATTA GTGTTCCCCGCGCCAGCGGGGATAAACCG TACTGCTCATATGCTTCATACATACCCACTAT GTGTTCCCCGCGCCAGCGGGGATAAACCG CCTGTGTGCGTGCAACGGGTAACTAAGGGGAA GTGTTCCCCGCGTCAGCGGGGCTTTTACT
>NZ_CP053417.1|WP_171923030.1|2713175_2714120_+|type-I-E-CRISPR-associated-endonuclease-Cas1 MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSIEQLRGIEGSRVRATYALLAKQYGVKWNGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSTKLTGRLIPLIENVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGIVNEHDGGGN >NZ_CP053417.1|WP_171923029.1|2712528_2713179_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE MYLSRITLHTSELPPAQLLHLVERGEYVMHQWLWELFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFVPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKMQGDSQDIWPYQQQAALAWLARQGEQNGFSLRQASVDAYRQQQIRREKSRQMIQFSSVDYTGVLVITDPVLFLQRLAQGYGKSRAFGCGMMMIKPGDDA >NZ_CP053417.1|WP_038392454.1|2711800_2712547_+|type-I-E-CRISPR-associated-protein-Cas5/CasD MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLSAFNCHYSFLLCASRNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLDGRAADVLREAYRRYQDQFNALKLTLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE >NZ_CP053417.1|WP_171923028.1|2710734_2711790_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRTGRIAREAAQILMESGIDAKKAVEYVEKIASCFGKVKADKKAKDPLTNAETEQLVHISPAEFEAVKALAHRLAEEKRAPKEEELALLRHDRMAVDIAMFGRMLANKPDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRAASEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTEQPRSLAAAFYEPINGTDQLNVAVKRITALRENMNAVYAQETAFKDFNVMNQQGSMKDVLDFICA >NZ_CP053417.1|WP_001028359.1|2710166_2710721_+|type-I-E-CRISPR-associated-protein-Cse2/CasB MNIVKDDHKATLRQWHEELQEKRGARASLRRSVTVNDVCLSEGFRSLLMQTHTLWKIEGQEWRFTALALTAAVAANVKTIDERQTFAAQLGQMTGNNPVMSERRFTRLSTVKTSDELLRQLRRAVKLLNGAVNLISLAEDIFRWCQEHDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEKV >NZ_CP053417.1|WP_171923027.1|2708613_2710170_+|type-I-E-CRISPR-associated-protein-Cse1/CasA MKSFSLLTSCWLPVRFKDGSMGKMAPVDLADENVVDIAATRADLQGAAWQFLLGVLQCSLAPKNSARWEDIWEDGLTEPMLREALAPLEHAFQFGAETPSFMQDFEPLTGEKVSIASLLPETPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQMYQGERQTPLWRKLWLNVMPQDAADLPLPAACDASVFPWLAATRTSEQASAITTPEHVNKLQAYWGMPRRIRLDFTTTQSGACDICGTNSDDLLSVMTVKNYGVNYDGWRHPLTPYRLPVKEGSGFFSVKPQPGGLIWRDWLGLSQENQTEANKEYPAQVVKVFNARRLKDVKAGLWGFGADFDNMKIRCWYEHHFPLLMTEGLMPDLRKTTQTAARLLSLLRSALKEAWFANAKDARGDFSFIDIDFWNLTQGDFLNLIRDLENGGEPDELLTKWRRELWLFTRRYFDDRVFTNPYESNDLKRIMTARKKYFTTSAEKQSAKAARAKKQEAAE >NZ_CP053417.1|WP_171923674.1|2705938_2708602_+|CRISPR-associated-helicase-Cas3' MLIYHYWGKSRQGEASGGDDYHLLCWHSLDVAAVGYWMVKNNIYFIDHYLKKLGLQDNEQAAQFFAWILCWHDIGKFAHSFQQLYRHEDLNVFNEPPGHYEKIPHTTLGYWLWNTWLSECPELFPPSSLSVRKSKRVMTLWMPVTTGHHGRPPDAIPEVDHFRQQDKDAAREFLLKIKALFPLITLPEAWDEDEGIAQFQQLSWFISATVVLADWTGSASHYFPRMAEKMPVEMYWQQALIKARKAITLFPTAANVSAFTGIETLFPFIQHPTPLQQKALTLDIHVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANSWLALYQPDSRPSLVLAHSARHLMDRFNQSIWSASLSGTEEPDDASPYSQGCAAWFTDSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIECQASNGNATILLSATLSQQQRDKLVAAFSRGVKRSVQAPLLGHDDYPWLTQVTQNELISQHIDTRKEVERSVNIGWLHSEASCLEYIGEAVKKGNCIAWIRNSVDDAIRIYRQLLLSKTIAAENLLLFHSRFAFHDRQRIEMQTLDLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHLRDRSGLVKTNGLDEREVPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGAIRMPQSARLLIESVYGDDVDMPAGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDFLPEKMSTRLAEESITLWLAKVIDNVLIPYAPGEHPWEMSALRVRKSWWEKHNGEFERLEGESFHRWCVEQHQNKDFAIVIVVSDSAACGYSATEGLTGKMEA >NZ_CP053417.1|WP_171923026.1|2704550_2705504_-|SPI-1-type-III-secretion-system-effector-SopD MPVTLHFGNQQNYMLNESRLAQLLSADKEKATHKGYWNKLQDHFRSEKQDHALEVLHGMLYGHARNEPGEMEINVEGMSKIYAFKHLQRLACSADQDLFRIQMDASQTQLLFMIGDTVISQSSIQDTLNLSENAVVKSMDRAERELFLKICEMIGSTITWHADLLQGSASTLRKEVAGNAQIKEAVYKMMRPNEAPDHRLVEWRGSLTEKEESILACINADSFDIITQFCKLGYREVQSEVSFFMIHPCITYLLHSYSPITEFKETNTAFLNNFNQDYDNYHSNKRDIDPILEEIYLTHEHSLHIGKNNCSRNILML >NZ_CP053417.1|WP_001096609.1|2703725_2704460_+|phosphoadenosine-phosphosulfate-reductase MAKLSLSALNERPKVDRVLALAETNAALETLSAEERIVWALENLPGEYVLSSSFGIQAAVSLHLVNQVYPGIPVILTDTGYLFAETYQFIDELTEKLNLNLKVYRAKESAAWQEARYGKLWEQGIEGIEKYNDINKVEPLNRALHELSAQTWFAGLRREQSGSRATLPVLAIQRGVFKVLPIIDWDNRTVFQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG >NZ_CP053417.1|WP_171923025.1|2701929_2703642_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit MSEKHPGPLVVEGKLSDAERMKRESNYLRGTIAEDLNDSLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVISTTQWKAIDKFAAENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAVAENGRLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGIDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIAGVPESEKTKIEKLARDHGLMNAVTAQRENAMACVSFPTCPLAMAEAERFLPTFIDKVEAIMASHGMSDEHIVLRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITESDILASLDELIGRWAKEREAGEGFGDFTVRAGIVRPVLDPARDFWE >NZ_CP053417.1|WP_171923031.1|2714970_2716023_-|aminopeptidase MFSATRRFTAILALGVSAVLPALAASPNPGEMANIQARHIATFFPGRMTGSPAEMLSADYLRQQFSQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGNVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGIDDDAVGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENVLQRMSATEKKNTLLVINLDNLVVGDKLYFNSGKNTPEAVRTLTRDRALAIARQHGIAASTNPGLNPAYPKGTGCCNDAEVFDDAGISVLSVEATNWSLGKKDGYQQRTKNASFPDGNSWHNVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAAPIQPK >NZ_CP053417.1|WP_020845103.1|2716275_2717184_+|sulfate-adenylyltransferase-subunit-CysD MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGSLPFPLLHVDTGWKFREMYAFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALTKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGLINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLIMVDDDRIDLQPGEVIQKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF >NZ_CP053417.1|WP_079772650.1|2717193_2718633_+|sulfate-adenylyltransferase-subunit-CysN MNTTLAQQIADEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREEAFARIREDYLTFAEQLPGNLDIRFVPLSALEGDNIAVQSAAMRWYSGPTLLEVLETVDIQRVADRQPMRFPVQYVNRPNLDFRGYAGTLASGCVRVGQRIKVLPSGVESSVARIVTFDGDKDDAYAGEAITLVLNNEIDISRGDLLLAATETLTPVQRAAIDVVWMAEQPLTPGQSYDVKLAGKKTRARIDNIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDVYQQNPVTGGLIFIDRLSNVTVGAGMVREAVEGNVTPPEKYSAFELELNALVRRYFPHWDARDLSGDKHGAA >NZ_CP053417.1|WP_038392448.1|2718619_2719225_+|adenylyl-sulfate-kinase MAQHDENVVWHSHPVTVAAREKLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRKENVRRVGEVASLMADAGLIVLTAFISPHRAERQLVQERVGNDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRHFTGIDAIYEAPESPQIHLNGEQLVTNLVSQLLDLLRQRDIIRS >NZ_CP053417.1|WP_171923032.1|2719275_2719599_+|DUF3561-family-protein MRNSHNITFTRSDAFIVDDDATSSLPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKLLFSMMFTLVAVGALFGVLSIWLLG >NZ_CP053417.1|WP_000517485.1|2719788_2720100_+|cell-division-protein-FtsB MGKLTLLLLTLLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAQTAGQNNR >NZ_CP053417.1|WP_171923033.1|2720118_2720829_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDTRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAEAQWVLVHDAARPCLHQDDLARLLAISANNRVGGILASPVRDTMKRGEPGKSVIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALIEGRADNIKVTRPEDLALAEFYLTRTIHQEKA >NZ_CP053417.1|WP_001219254.1|2720828_2721308_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase MRIGHGFDVHAFGGEGPVIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK >NZ_CP053417.1|WP_171923034.1|2721304_2722354_+|tRNA-pseudouridine(13)-synthase-TruD MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGNNLQGALRWAQSDAPVRDRNKRSFWLSAARSALFNQIVHQRLTKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKALMITASLPGSGEWGTQREALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVREVINTVGDYAHIAE >NZ_CP053417.1|WP_079772654.1|2722334_2723096_+|5'/3'-nucleotidase-SurE MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAIVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVADWLDSVGVGTQW |
You can click texts colored in the table to view more detailed information
CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NZ_CP053417_3 | 3009315-3009405 | Orphan |
NA
Consensus repeat of NZ_CP053417_3
|
1 spacers
spacers of NZ_CP053417_3
>3.1|3009338|45|NZ_CP053417|CRISPRCasFinder ATGCGTGGGGGAATGTTGGGTTACGCTTCGCGCCACCCAACCTAT |
CRISPR arrays and Neighbor proteins around NZ_CP053417_3
The CRISPR arrays of NZ_CP053417_3 >merge|NZ_CP053417|3|3009315-3009405|CRISPRCasFinder GCGCGTGATGAAATGGGGAGATGATGCGTGGGGGAATGTTGGGTTACGCTTCGCGCCACCCAACCTATGCGTGTGATGAAATGGGGAGATG >NZ_CP053417|3|3|3009315-3009405|CRISPRCasFinder GCGCGTGATGAAATGGGGAGATG ATGCGTGGGGGAATGTTGGGTTACGCTTCGCGCCACCCAACCTAT GCGTGTGATGAAATGGGGAGATG
>NZ_CP053417.1|WP_171923115.1|3002067_3008475_+|hypothetical-protein MDGKLHNNLYRFSLALLLMIGMCVAPASASLKGGTWQELSSSTAAVNGTVPRADGAAVPVYQGSTLLQPGQTHLVAYTAMPRDFSVDASDSAMQAVNELDTEGDIFTATPLRWENQQPPTVGLLWADAETPDTPLSPQPSPNISFCLQNLAGRHLVVWPEIETDDTSPAPLLYIWTATGTPAKNTLTLLPQKIAIDIAPAASDPVAVSADHIDETLKASKVKVGESITLTVTTYGCDGQPVGNAPFVIRRDDALTRKGAVNNNAPVHVGNTELTTTQTLYRGVTDAQGKATVAVTQPEGPGVKTHLVVSSESYPQLVAGTDVIFTVLTSPDSEQANMYGHMPEHASAVVDGVTYTFTRPALAAETSGTGGTVIDVNETWAQFDWSGADNHCDILPAAEQLVALRNALSTMATYPGWPVSNDAEYWSSTNDQLDTYHYAVHTRSGTVVRESNSSVFLVSCVDKALPAAHPQISLSPAGPYKAEVGEAIDLVMTVVDRDTKKPLPYRYMELFIDPATNRKGNHEDAWDNLPVTVESADMRASSPEHYTGITDANGQAHLVLQHDYGVGVETPIRIVMTDDDGGKTELPFSVIFTVVTSPDVDGANMYGHMQGVVDAGNLYKRPLLAVEASHKTGQQSENNEDWATFNSVTAATQQCGTGQVPDQLSLDHLYNENAGNTMETAHGWPTQKLSYISGDSDGTQTAHVNLSTGDDGLFTQADNYLTCSANEKVAMLSVYFNDDPAEDNSMTAEVGQQIKMNVHSFNVLNNLAVPNADFTITLSPARRRDGLATGFTDPSNGQLVIDGVAYGAGEASMTYKGITDAQGNAEVIIEQPRGVGVLTPLSIVPIDSLITRPVSRSVKFTVATSPDVATARMWGHMPETVTVGDLTFERPKLADEVSAIGLQEEANENWARVLHADAAGNTAAGGCAANRLPRADQLAALYSANSSGDMHSVKGWPVSMDYWSASFQSASTWQQLSLANGNEVAGGSRDSDYVTCLTSDNPVAASITLEPVDASVWYDNGKVHAVKVKKSDTLQLKVTVKDASGKPVPQAPFVLTRGDGYGRDGDKYSAKEGGDVQDIVTPVVIDGTSLAWSTTKMGMVTDDDGTKIISVTRPDTHGTLTALTATLYDNPAVSATIDTIFTVITSPDSDKAHMWGHMPPSLTAADGSQYQRPLLYDELSSTTNAITFTEDHESWAGFYGPNSENPHPDACGNGYYPTADDLDSLYSKYPGQAIKTAQGWPVYRSYWSGTSASKLSTSEPYSYVAVDLSDGAHRSLSNRATSDMQYQICRATPTAQATQITLTSTLATDTIAQAVKVKNSEALPLIVTTTDAAGNPVGNVPFMLTRDAGTARNASYVKWAMPTMTLTPASGSAISFTSDTTVYGVTGADGTYTLDLAENNGPGIKNVLTANLSKTPTITSSLPVVFTVVTSPDSDKANMWGHMPETFTASNGAEFKRPLLFSELSTKVRNSGYVYSNTESNEAWYTINYFDNSSNDICPWEQMAALADYQSLYDVHPSGAVMTDLGLPVGKSWWAADRVLKNQTLYWQYINLKSDSVSTTTVNGNYYYQLCLIAPRQKDKIALTLTPWDESKSAAVVKKGEQIAATITVTNSTGKPVSNVPVKITRGNAQTREGNTYTANSADDITLNDVQPSGTSTLLKDLTSYLYAQTDAQGKITFTVSQNNTVGLKTPLNVVLVDDSSVADSKDMIFTVLTSPDSSYASYWGHMPETVEGPDNLRYQRPRLQAEVSSSSIGYIAVNGEKWAAPTGQQTYTTGKSACEVEYMPMMDDLKGLYNLYPGGALEDQFGWPVKTGNLWWSADLNSSQAHQTINLKNGQTSSQSAATTSLQVCLVEARDVPASITLTSTTMDATKGAAVAKKGESIPMTLTVKNRAGVPVPNTPFTVSRGDVYDRTSSTSSSGTADDLTLQQLSPSVSTQSMTSAGNVFRGVTGPDGTATFTVNQDASKGFKTTLTATATEDVTLSTSTTLDVIFTVITSPDSSYASYWGHMPDTLTVDGMTLHRPLLVKEAPSGSTDSRKENNETWVVVYLIADGTMYDMTKNCGGVAGFPEKGLLEKMRDEQIAVANGWPTISVPYISSTPGTYHYCRVSLAEGGATYCPTNAGDISIGYAACIVQP >NZ_CP053417.1|WP_171923114.1|3000989_3001952_+|hypothetical-protein MHLLTKQRLTKVALALAFAGYCTMPAVAADAKLKSGQWQSVSETTGTIQGTVPWITRDENKIADTDKNHVTVSVDRGGRAASTDGEKQFHIGDKVTVNWAIGDTEGDLDAGNAATKGTIQWMSYSDQNGSDAKEIGTRGSDTYEIQADDVDRYIGIKITPTTTTGDPAVATELLLNDLSTNAGGGSDDDDIPEGPVVNESVKVSIYEDGTTTNLLGTDTKLKTNTTYKVLLWSDKNGNSKYDTGEDVTDQYDYRWKFTGSSAIANTGKAGIVNESYNNHDLVIPLTNAEAKAAFEGADGGVTIGTDGVQGFGLSIDYKRK >NZ_CP053417.1|WP_171923113.1|2998755_3000951_+|intimin-like-inverse-autotransporter-SinH MVRRIRVLVLLLVSGASVAASGAAVSVSANDESQASLPDLASESAKKEEQENKGKTLNEQGTDYFINSATQGFDNLTPEALQSEARNYIQGKITSSAQSYLEGMLSPYGKVRTSLSVGEGGDLDGSSLDYFIPWYDNQSTLFFSQISAQRKEDRSIGNLGFGLRQNVGNWLLGGNLFYDYDFTRGHRRLGLGTEAWTNYLKFSGNYYHPLSDWKDSQDFDFYEERPARGWDIRAESWLPFYPQLGAKLVYEQYYGDEVALFGTDNLQKDPHAVTVGLNYTPVPLLTLGADYKAGTGDSNDFSVNATVTYQPGTPLAAQLDPDNVNIQHSLMGSRTDFVDRNNFIVLEYREKDPLDVTLWLKADATNEHPECVIQDTPEAAVGLEKCKWTVNALINHHYKIVSASWQAKNNAARTLVMPVVKADALTEGNNNRWNLILPAWVNADTDAQRIALNTWKVRMTLEDEKGNKQNSGVVEITVQQNRKIELIVDNIADPDRTDHSHTASALADGEDGVVMDLLLTDAFGDSTDRNGNELVDDTMAPELYDSNDKKVTLAQTPCSTQAPCVFIAKRDKAAGTVTLSSTLPGTFRWKAKEDAYGDSNYVDVTFTGEALEPLNALIYQVKTKNPVNLIGKEDKHPTVNNTYRFLLWRDKNKDGVFQMSEQLSVEEMAQYDYQWEFTGQSTNGHTGAQANTRNEDLVLPVTNREAAQRFAANEEDGVQGYGIRVAYSQKK >NZ_CP053417.1|WP_000426038.1|2998204_2998426_+|zinc-ribbon-domain-containing-protein MEMSCPVCHHALERNGDTAHCATCNKHFALQAICPDCRQPLQVLKACGAVDYFCQNGHGLISKKRVSFIITNP >NZ_CP053417.1|WP_171923112.1|2996611_2998084_+|ribosome-biogenesis-GTPase-Der MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDVVPQEEVDEDAEYWAQLEAEENGEEEPEDNFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDEREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVSTAMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLEVMGTPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKSK >NZ_CP053417.1|WP_079773058.1|2995316_2996495_+|outer-membrane-protein-assembly-factor-BamB MQLRKLLLPGLLSVTLLSGCSLFSGEEDVVKMSPLPEVENQFTPTTAWSTSVGNGIGDFYSNLHPVMADNVVYAADRAGVVKALNADDGKEIWSVNLGEKDGWFSRSSALLSGGVTVAGGHVYIGSEKAEVYALNTSDGTTAWQTKVAGEALSRPVVSDGIVLIHTSNGQLQALNQADGAIKWTVNLDMPSLSLRGESAPATAFGAAIVGGDNGRVSAVLMQQGQMIWQQRISQATGPTEIDRLSDVDTTPVVVNGVVYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVEGDRIYLVDQNDRVLALTTDGGVTLWTQSDLLHRLLTSPVLYNGDLVVGDSEGYLHWINVDDGRFVAQQKVDSSGFLTEPTVADGKLLIQAKDGTVYAITR >NZ_CP053417.1|WP_000409193.1|2994685_2995306_+|YfgM-family-protein MEIYENEHDQVDAIKRFFAENGKALVVGVILGVGALIGWRYWNSHQTESARTTSLAYQNAVAAVSADKPDSIPAAEKFAAENKNTYGALASMELAQQFVDKNELKKAEAQLQQGLAATSDENLKAVINLRLARVQVQLKQADAALKTLDAIKGEGWTAIVADLRGEALLSKGDKKGARSAWEAGVNSDASPALSEMMQMKINNLSI >NZ_CP053417.1|WP_001107145.1|2993397_2994672_+|histidine--tRNA-ligase MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGAEVFGLQGPDIDAELIMLTARWWRALGISEHVRLELNSIGSLEARANYRDALVAFLEQHKETLDEDCKRRMYTNPLRVLDSKNPDVQALLNDAPALGDYLDDDSREHFAGLCQLLEAAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTNHGGGNFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLRTLLG >NZ_CP053417.1|WP_171923111.1|2992168_2993287_+|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVSQIKALERVGADIVRVSVPTMDAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQERYGEPTPQALLESAMRHVDHLDRLNFEQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVRKDRLDNDDMIAQLEARIRAKASQLDEMRRIDVLQVEK >NZ_CP053417.1|WP_171923110.1|2991161_2992142_+|cytoskeleton-protein-RodZ MNTEATHDQNEAQTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTFLRGYIRSYARLVHVPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMSFTWLVLFVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDSGQSVPLDASAAASQDTTPADSTAAVTPPPPASTPAASQNTVVAPSQANVDTAATSAASAATETPSALPTDQAGVAAPAADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLGRFIRTNQVARLTLNAEPTPAQ >NZ_CP053417.1|WP_171923116.1|3009490_3010837_-|exodeoxyribonuclease-VII-large-subunit MLSSQTSSIFTVSRLNQTVRLLLEQEMGQVWLSGEISNFTQPASGHWYFTLKDDNAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKLQAEGLFDQQFKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANARGECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTIADFVGDLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTALEKLRQRMNNALENQIKQANQRQQRMLQRLHQQNPQPRIYRAQSRIQQLEYRLAENIRARLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTNGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSITSGA >NZ_CP053417.1|WP_171923117.1|3010997_3012464_+|IMP-dehydrogenase MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIARQAEEVRRVKKHESGVVTDPQTVLPTTTLREVKELTERNGFAGYPVVTEDNELVGIITGRDVRFVTDLSQQVSVYMTPKARLVTVREGEAREVVLAKMHEKRVEKALVVDDNFHLLGMITVKDFQKAERKPNSCKDEQGRLRVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGGNVATGAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVSDAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCATIDELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS >NZ_CP053417.1|WP_000131515.1|3012533_3014111_+|glutamine-hydrolyzing-GMP-synthase MTDNIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIREFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEGSNEREFGYAQVEVVNDSALVRGIEDSLTADGKPLLDVWMSHGDKVTAIPADFVTVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAVARIREQVGEDNVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVMDMFGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE >NZ_CP053417.1|WP_020844916.1|3014436_3014976_-|DUF5384-family-protein MKKVILGAILFTISGSALSSSLQDQLAAVAQAEQQGKNEENRQRDALQAKRDREAQQERQRQANAAALAQQRAKAAEAERKARRAKLDAEAAQDKQRDQSYEDELRQLEIQKQKLALAREEARVKRENEFIDQELKSQAARTDVIQSHADANRNLSEGSRDLLQSEGKAREEKASGWFN >NZ_CP053417.1|WP_000273671.1|3014991_3015507_-|glycine-zipper-2TM-domain-containing-protein MYFKKNALPLVIIASFSLAGCQSNADDYAADVYQTGQLNAKQETRTVNIISVLPAKVAVDNTANKKAAQTFGAILGAVAGGVTGHNVGSGSGLGTTAGAVGGGAVGAAAGSLVKDKTLVEGVSLTYKEGTKIYTSTQVGKSCQFTTGLAIVISTKDNETRIQPNTKCPEKS >NZ_CP053417.1|WP_000075922.1|3015756_3015948_-|YfgG-family-protein MSQANSMRKRHRFNSRMTRIVLLISFIFFFGRFVYSSIGAWHHHQDKKEAQQSTLSVDTPVQR >NZ_CP053417.1|WP_020844914.1|3016127_3016265_+|hypothetical-protein MENNFSIYINNKLMITKDKKVNKGIERRVIIDLNQMLLLFNNYNR >NZ_CP053417.1|WP_171923118.1|3016361_3018575_+|sensor-domain-containing-phosphodiesterase MKLNKTYINIRDKWWGLPLVLPSILLPVLSSANTYAHTSTGNVVLFYLPLAFTLSLMLFFGWAALPGIVAAIFWRRYSQTGLYETLSVAMHFIITIVLSWGGYRVFSPRRNNVSHGDAHLMFQRMFWQVFCSATLFLVIYQFAVFVGMYESKVSLMGVMPFNINTLINYQALLVGNLIGVPLCYFIIRTIRNPLHLRGYYQQLKLQIDSKVTKKEIVIWLAVLIMLMFILCMPLTDNSSIFSTNYMLSLLLPVMLWGAMRYGYKFISIIWAVVLITSIHYYQRYTPWYAGYDTQLAITSSSYLVFSFIVNYMAVLATRQRVVSGRARRLAYLDPVVHLPNLRALNRALKNTPWSTICFLHVPGLELLGKNYGVMLRIQYKQKLSHWITPMLASNECVYQMSGHDLVLRLNTESHQQRIEALDKHIKQFRFIWDGMPLQPPVGVSYCCVRSPVSHLYLLLGELSTSSDLSLTTNAPEDLQRRGAVHLQRDLKGKIAMMNRLQQALEHDHFFLMAQPISGVRGDVYHEILLRLKDDNGDVINPERFLPVAHEFGLSSAIDLWVIENTLRFMAASREYMPAHRFAINLSPTSVCRARFPAEVSQLLNQYQVEPWQLVFEVTESNALTSAEQAQLTLGQLQQFGCQIAIDDFGTGYASYARLKNVNADILKIDGSFIRNIVSNSLDYQIVASICHLARMKKMQVVAEYVESEEIRSAVLALGIDYLQGYLIGEPQLLSGIQ >NZ_CP053417.1|WP_171923682.1|3018609_3020151_-|exopolyphosphatase MPIYDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGADNMLSEEAMARGLSCLSLFAERLQGFSPSSVCIVGTHTLRQARNAADFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPKLVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQYRIQGWNVAMGASGTIKAAHEVLLALGEKDGFITPERLDKLRSEVLKHRTFNALSLPGLSEERKAVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTAKSLANQYNIDREQARRVLETTMQMYEQWQAQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQHSDLPGFNQEQQMMMATLVRYHRKAIKLDDLPRFTLFKKKQYLPLIQLLRLGVLLNNQRQATTTPPTLQLITDDSHWTLRFPHDWFNQNALVLLDLEKEQQYWEAVTGWQLNIEEERSPEIAA >NZ_CP053417.1|WP_038392306.1|3020155_3022222_-|polyphosphate-kinase-1 MGQEKLYIEKELSWLAFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEMARNQIFLINERQLSVNQQSWLRHYFKHYLRQHITPILINRETDLVQFLKDDYTYLAVEIIRGDAISYALLEIPSDKVPRFVNLPPETPRRRKPMILLDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVHEMESSLMELMSSSLKQRLTAEPVRFVYQRDMPAALVDVLREKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHLWFDKEKFRNGFDAIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKEGDDVVRYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQNSRRLLYEMIDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASGSGVSVNLLVRGMCSLIPLLEGISDNIRAISIVDRYLEHDRVYIFENGGDKQVWLSSADWMTRNIDYRIEVATPILDPRLKQRVLDIIDILFSDTVKARFIDKELSNRYVPRGNRRKVRAQLAIYDYIKSLEQPD |
You can click texts colored in the table to view more detailed information
CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NZ_CP053417_4 | 3103199-3103398 | Orphan |
NA
Consensus repeat of NZ_CP053417_4
|
1 spacers
spacers of NZ_CP053417_4
>4.1|3103248|102|NZ_CP053417|CRISPRCasFinder TTAACGTCTTATCCGGCCTACGCGGCGGTGTCGTCTGTGCCGGATGGCGATTAACGTCTTATCCGGCCTACGCGTGCGGTGTCGTCTGTGCCGGATGGCGAC |
CRISPR arrays and Neighbor proteins around NZ_CP053417_4
The CRISPR arrays of NZ_CP053417_4 >merge|NZ_CP053417|4|3103199-3103398|CRISPRCasFinder TAACGTCTTATCCGGCCTACGCGGCGGTGTCGTCTGTGCCGGATGGCGATTAACGTCTTATCCGGCCTACGCGGCGGTGTCGTCTGTGCCGGATGGCGATTAACGTCTTATCCGGCCTACGCGTGCGGTGTCGTCTGTGCCGGATGGCGACTAACGTCTTATCCGGCCTACGCGGCGGTGTCGTCTGTGCCGGATGGCGA >NZ_CP053417|4|4|3103199-3103398|CRISPRCasFinder TAACGTCTTATCCGGCCTACGCGGCGGTGTCGTCTGTGCCGGATGGCGA TTAACGTCTTATCCGGCCTACGCGGCGGTGTCGTCTGTGCCGGATGGCGATTAACGTCTTATCCGGCCTACGCGTGCGGTGTCGTCTGTGCCGGATGGCGAC TAACGTCTTATCCGGCCTACGCGGCGGTGTCGTCTGTGCCGGATGGCGA
>NZ_CP053417.1|WP_079774539.1|3102171_3103098_+|LysR-family-transcriptional-regulator MNYSLRQLRIFITVARAKSFSRAGDMIGLSQSAVSHSVKELERQTGVRLLDRTTREVVLTEAGQQLATRLERVLDELNSILRDAGRVGTQLTGTVRVAASQTISAHLIPQCIAQSDLLYPAIDFVLHDRPQQWVLESIRQGEVDFGIVIDPGAAVDLQCEAILSEPFLLLCRQDHPLAHQEWVSWQDLKQARLVLQDYASGSRPLIDAALAHFAIEADIVQEIGHPATLFPMVEAGIGISVLPALALPLPQGSHLLVKRLTPVVERQLMLARRKNRSLSTAAQALWDVVRTQASELTAAREKDPLYQM >NZ_CP053417.1|WP_171923145.1|3101083_3102082_-|bile-acid:sodium-symporter MKLFRILDPFTLTLITVVLLASFFPAEGGFVPVVEGITTAAIALLFFMHGAKLSREAIIAGGSHWRLHLWVMCSTFVLFPVLGVFFAWWAPVNVDPMLYSGFLYLCILPATVQSAIAFTSLAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNIHGAQGSLEEVGKIMLQLLLPFVLGHLSRPWIGNWVARNKKWIAKTDQTSILLVVYSAFSEAVVNGIWHKVGWGSLMFIVVVSLVLLAVVIAINVFVARQCGFNKADEITIVFCGSKKSLANGIPMANILFPTSVLGMMVLPLMIFHQIQLMVCAGLARRYKRQTEKLQAQQESRAAKA >NZ_CP053417.1|WP_171923144.1|3098851_3100867_+|NAD-dependent-DNA-ligase-LigA MEPIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRDLRELESQRPDLITPDSPTQRVGAAPLTAFNQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSTEKVTWCCELKLDGLAVSILYENGVLVRAATRGDGTTGEDITANVRTIRAIPLKLHGDNIPARLEVRGEVFLPQAGFEKINDEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGELPDTHLGRLLQFKAWGLPVSDRVTLCDSPQAVLDFYHKVEADRPTLGFDIDGVVIKVNSLALQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVQVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPDATRPVVFPAHCPVCGSDVERVEGEAVTRCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEREYVHTPADLFRLTAGKLTGLDRMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALQAATIDELQKVPDVGIVVATHVFNFFAEESNRDVIGQLLAEGVHWPAPVVINVQEIDSPFAGKTVVLTGSLSQMSRDDAKARLAALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGINVIDEAEMLRLLGV >NZ_CP053417.1|WP_171923143.1|3097793_3098780_+|cell-division-protein-ZipA MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRMKSKRDDDSYDDDVEEDEGVGEVRVHRVNHAPGQPQEHDAPRQPPQHQYQPPYASAQPRPAAPPQPQAPMQQPVQQPVQPAPQPQQVQPSAPPVQPPQQQPAPPSQAPQPVAQPAPPPSAQTFQPAEPVVEAEPVVEEAPVVEKPQRKEAVIIMNVAAHHGSELNGEVLLNSIQQSGFKFGDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTDFTTPGVTIFMQVPSYGDALQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDRIREVMDANA >NZ_CP053417.1|WP_171923142.1|3096800_3097562_-|sulfate-transporter-CysZ MVSSSTTVPRSGVYYFSQGWKLVTLPGIRRFVILPLLVNIVLMGGAFWWLFTQLDAWIPSLMSHVPDWLQWLSYLLWPIAVISVLLVFGYFFSTLANWIAAPFNGLLAEQLEARLTGTTPPDAGVLGIMKDIPRIMKREWQKLAWYLPRAIVLLILYFIPGIGQTIAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRVALRGRKVANMQFGALTSLFTMIPVLNLFIMPVAVCGATAMWVDCWRAKHALWK >NZ_CP053417.1|WP_000036904.1|3095665_3096637_-|cysteine-synthase-A MSKIYEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ >NZ_CP053417.1|WP_000487600.1|3095024_3095282_-|phosphocarrier-protein-Hpr MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE >NZ_CP053417.1|WP_000623111.1|3093247_3094975_-|phosphoenolpyruvate-protein-phosphotransferase-PtsI MISGILASPGIAFGKALLLKEDEIVIDRKKISADKVDQEVERFLSGRAKASAQLEAIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAAHEVIEGQATALEELDDEYLKERAADVRDIGKRLLRNILGLAIIDLSAIQDEVILVAADLTPSETAQLNLQKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNGDFIILDAVNNQVYVNPTNEVIDQLRAVQEQVATEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTMDIGGDKELPYMNFPKEENPFLGWRAVRIAMDRKEILRDQVRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVNKFIEEKTIC >NZ_CP053417.1|WP_000522253.1|3092697_3093207_-|PTS-glucose-transporter-subunit-IIA MGLFDKLKSLVSDDKKDTGTIEIVAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGIELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDPVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGETPVIRIKK >NZ_CP053417.1|WP_038392275.1|3092295_3092535_+|hypothetical-protein MKSYRLVVRQQGRIVGHFETSGRDALEDICVARAMFGMAGGYQCELLVSDSERRVLESGPEGMKILMQEKCFRPVTSQL >NZ_CP053417.1|WP_171923146.1|3104245_3105661_+|glutamate--tRNA-ligase MKIKTRFAPSPTGYLHVGGARTALYSWLFARHHGGEFVLRIEDTDLERSTPEAIEAIMDGMNWLNLEWDEGPYFQTKRFDRYNAVIDEMLAAGTAYKCYCSKERLEQLREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQDGSVIFDDQIRGPIEFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALNAPVPLYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSSGDQEIFTREEMIKLFSLGAVSKSASAFNTDKLLWLNHHYINTLAPEYVATHLQWHIEQENIDTRNGPQLAELVKLLGERCKTLKEMAQSCRYFYEDFAEFDADAAKKHLRPVARQPLEVVRDKLAAIGEWTAENIHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGKSRSIERINKALAFIAEREHQQ >NZ_CP053417.1|WP_000826516.1|3105713_3106106_-|putative-DNA-binding-transcriptional-regulator MKRLRSKMTTEELAECLGVARQTVNRWIREQHWKTEKFPGVKGGRARLIHIDASVREFILNIPAFRKLPAFYQAEEPFAEYANAVHSHAYRQIIDAVENMSAQEQEKLALFLSREGIRGFLTRLGINESD >NZ_CP053417.1|WP_079773684.1|3106107_3106470_-|putative-DNA-binding-transcriptional-regulator MFKERMTPEELANLTGYSRQTINKWVRKEGWATSPKPGVQGGKARLVHVNEQVREYIRSAERSVDHQADTFTPAGDASLEALLMTLAKEMTLSEQKQFTSLLVREGITGLLQRLGIRDSK >NZ_CP053417.1|WP_171923147.1|3107073_3109263_+|sensor-domain-containing-phosphodiesterase MPDKYNLLKNIKIFLLALCLTVPAILVSRAISPRATIDSSYIFLAWLPLCVMFAVLFLFGRRGVAPMIVAMTLTNEWNFHLPLPQAMVLLFCQTFPVLLVCAIVRWLLGTRWRYGILNKGIWLRVFWLGLMTPFGIKISMHLAGHYLAFPVTISTFFGTGTAIFSIVDTLSLISAALIFTFFFYYPMRMMASPHYIRIFWRRNVSPYFAREKRLFTFLWFGSLATLLAVLCTPFETKYIAGYLVPVLFIGFTLGVGKIRYPLLNLSWAITALFLLSYNRNFLQGVGSEYSLAFILSVLISFSICLLYMARINQRSEWLNRQWHTQALTDPLTRLPNLRALEQFLLQGAGQSVCYLRMENLEFLSRHYGMQMRVHCERAVFRELQPLLLEKEKIFHLPGSELLLVLTGPETEARLQYMLNVLNNRKIYWNNTGLEMEYGAAWGTFDGRQETLQPLLGQLSWLAEQSCSHHRVLSLTHSVEAASGQTTERVLRLQKIRQALERGALVLYAQPIRDAQGKGYDEILTRLRCDDGMMMPNQFIPLIAQFNLSVRFDMQVMEALLQWLSAHPSADQGARFSVNLMPLTLLQKETAPRIIQLFKRYGVPPAAVIIEITEEQAFSHSEASMHNINQLRKFGLKIAIDDFGTGYANYERLKRLKADIIKIDGCFVKDILTDSLDAMIVKSITDLAKAKSLSVVAEFVETPAQRDLLLQLGVHSLQGYLIGRPRPLGE >NZ_CP053417.1|WP_000376354.1|3109343_3110546_-|nucleoside-permease-NupC MDRVLHFVLALAVVAVLALLVSSDRKKIRIRYVIQLLVIEVLLAWFFLNSNVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFISALIGILQHIRVLPVVIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGKMSRNRMYTMAATAMSTVSMSIVGAYMTMLDPKYVVAALVLNMFSTFIVLSLINPYRVDASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTGWFGYSISFQGILGYIFYPVAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIASTLSPRAEGIISVFLVSFANFSSIGIIAGAIKGLNEEQGNVVSRFGLKLVYGSTLVSVLSASIAALVL >NZ_CP053417.1|WP_171923148.1|3110887_3112129_+|Nramp-family-divalent-metal-transporter MTDNRVENSSGRAARKLRLALMGPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRHGQKPLEKVIGGLLLFVAAAYIVELFFSQPDIAQLGKGMVIPALPDSEAVFLAAGVLGATIMPHVIYLHSSLTQHLHGGTRQQRYSATKWDVVIAMTIAGFVNLAMMATAAAAFHFSGHTGIADLDQAYLTLEPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFVHFHIPLWVRRTITMLPSFIVILLGLDPTRILVMSQVLLSFGIALALVPLLIFTSNRALMGELVNTRRVKQIGWMIVALVVALNLWLLVGTVMGLS >NZ_CP053417.1|WP_000490092.1|3112177_3112504_-|DUF2502-domain-containing-protein MFRSLILAAALLAFTPLAANAGEITLLPSIKLQIGDRDDYGNYWDGGRWRDRDYWHNHYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRNDHRGRGRGHKHHH >NZ_CP053417.1|WP_171923149.1|3112617_3113616_-|L-glyceraldehyde-3-phosphate-reductase MVYQRDENRYHTMEYRRCGRSGIKLPAISLGLWHNFGDATRAENSRALLQRAFDLGITHFDLANNYGPPPGSAEYNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRKYLIASLNQSLKRMGLEYVDIFYHHRPDPETPLEETMKALDHLVRQGKALYVGISNYPAERARQAIDILEDLGTPCLIHQPKYSLFERWVEDELLALLQEKGVGSIAFSPLAGGQLTDRYLNGIPQDSRAASGSRFLKPEHITADKLEKVRQLNDLAARRRQKLAQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLANRHFSSTECAEIDAILNTGL >NZ_CP053417.1|WP_171923150.1|3113794_3115447_+|indolepyruvate-decarboxylase MQTPYTVADYLLDRLAGCGIDHLFGVPGDYNLQFLDHVIDHPTLRWVGCANELNAAYAADGYARMSGAGALLTTFGVGELSAINGIAGSYAEYVPVLHIVGAPCSDAQQRGELMHHTLGDGDFRHFYRMSQAISAASAVLNEQNACYEIDRVLGEMLTAHRPCYILLPADVAKKPAIPPTETLMLPANKAQSSVETAFRYHARQCLMNSRRIALLADFLARRFGLRPLLQRWMVETPIAHATLLMGKGLFNEQHPNFVGTYSAGASSKEVRQAIEDADMVICVGTRFVDTLTAGFTQQLPAERTLEIQPYASRIGDSWFTLPMELAVSILRELCLECAFAPSPTRSSGQSIPVEKGALTQENFWQTLQQFIKPGDIILVDQGTAAFGAAALSLPDGAEVLVQPLWGSIGYSLPAAFGAQTACPDRRVILIIGDGAAQLTIQEMGSMLRDEQAPIILLLNNEGYTVERAIHGAAQRYNDIASWNWTQIPQALSAAQQAECWRVTQAIQLEEILARLARPQRLSLIEVMLPKADLPELLRTVTRALEMRNWG >NZ_CP053417.1|WP_171923151.1|3115467_3116703_-|ion-channel-protein MLHPRARTMLLLSLPALIIGVASSLLLIAAMKIASVFQQFLWQRLPASIGIAYDSPFWMVGILTLTGIVVGLIIRYSPGHAGPDPAIEPLISMPASPSALPGLLLALIIGLAGGVSLGPEHPIMTVNIALAVAFGSRLFPRITALDWTILASAGTIGALFGTPVAAALIFSQTLSGANDVPVWDRLFAPLMAAAAGSLTTSLFFQPHFSLPIAHYTQMRLVDIASGAIVATIAIAAGMVAVWCLPRLHELLHRLKNPVLILGIGGFMLGILGLIGGPLTLFKGLDEMQQMAFSQTLGAGDYFTLAIVKLAALVIAAASGFRGGRIFPAVFIGAALGLMLHAHVDAVPAAITVSCAILGLVLVVTRDGWLSLFMAAVVVPDTNLLPLLCIVMLPAWLLLAGKPLLAANHHEP |
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CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
---|
CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
---|---|---|---|---|---|---|---|---|
NZ_CP053417_1 | 1.10|2698009|28|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2698009-2698036 | 28 | NZ_CP048420 | Sphingomonas insulae strain KCTC 12872 plasmid unnamed2, complete sequence | 2179-2206 | 6 | 0.786 |
NZ_CP053417_1 | 1.4|2697643|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2697643-2697674 | 32 | NZ_CP053574 | Citrobacter sp. TSA-1 plasmid unnamed1, complete sequence | 129359-129390 | 7 | 0.781 |
NZ_CP053417_1 | 1.4|2697643|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2697643-2697674 | 32 | HE858210 | Enterobacteria phage RB43, isolate RB43-GVA complete genome | 77907-77938 | 7 | 0.781 |
NZ_CP053417_1 | 1.4|2697643|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2697643-2697674 | 32 | MT334653 | Buttiauxella phage vB_ButM_GuL6, complete genome | 76988-77019 | 7 | 0.781 |
NZ_CP053417_1 | 1.4|2697643|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2697643-2697674 | 32 | HE981739 | Enterobacteria phage RB43, isolate RB43-GVA orf057::gfp complete genome | 77910-77941 | 7 | 0.781 |
NZ_CP053417_1 | 1.4|2697643|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2697643-2697674 | 32 | NC_007023 | Enterobacteria phage RB43, complete genome | 78305-78336 | 7 | 0.781 |
NZ_CP053417_1 | 1.13|2698188|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2698188-2698219 | 32 | NZ_AP017309 | Leptolyngbya sp. NIES-3755 plasmid plasmid1 DNA, complete genome | 151722-151753 | 7 | 0.781 |
NZ_CP053417_1 | 1.13|2698188|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2698188-2698219 | 32 | NZ_CP017244 | Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence | 1713683-1713714 | 8 | 0.75 |
NZ_CP053417_2 | 2.3|2714525|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2714525-2714556 | 32 | NZ_CP013139 | Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence | 618545-618576 | 8 | 0.75 |
NZ_CP053417_1 | 1.5|2697704|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2697704-2697735 | 32 | LR134125 | Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5 | 727825-727856 | 9 | 0.719 |
NZ_CP053417_1 | 1.12|2698127|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2698127-2698158 | 32 | NZ_CP035508 | Haematobacter massiliensis strain OT1 plasmid pOT1-8, complete sequence | 66938-66969 | 9 | 0.719 |
NZ_CP053417_1 | 1.14|2698249|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2698249-2698280 | 32 | NZ_CP020744 | Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence | 390175-390206 | 9 | 0.719 |
NZ_CP053417_1 | 1.15|2698310|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2698310-2698341 | 32 | NC_006872 | Clostridium perfringens plasmid pBCNF5603 DNA, complete sequence | 10274-10305 | 9 | 0.719 |
NZ_CP053417_1 | 1.16|2698371|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2698371-2698402 | 32 | NC_006872 | Clostridium perfringens plasmid pBCNF5603 DNA, complete sequence | 10274-10305 | 9 | 0.719 |
NZ_CP053417_2 | 2.6|2714708|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2714708-2714739 | 32 | MN693211 | Marine virus AFVG_25M75, complete genome | 30583-30614 | 9 | 0.719 |
NZ_CP053417_2 | 2.6|2714708|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2714708-2714739 | 32 | MN693477 | Marine virus AFVG_25M76, complete genome | 1580-1611 | 9 | 0.719 |
NZ_CP053417_2 | 2.6|2714708|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2714708-2714739 | 32 | MN693434 | Marine virus AFVG_25M407, complete genome | 30374-30405 | 9 | 0.719 |
NZ_CP053417_1 | 1.9|2697948|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2697948-2697979 | 32 | NZ_CP049029 | Fluviibacterium aquatile strain SC52 plasmid pSC52_1, complete sequence | 310272-310303 | 10 | 0.688 |
NZ_CP053417_1 | 1.14|2698249|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2698249-2698280 | 32 | AP014321 | Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C32, *** SEQUENCING IN PROGRESS *** | 24496-24527 | 10 | 0.688 |
NZ_CP053417_2 | 2.2|2714464|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2714464-2714495 | 32 | NZ_CP032696 | Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence | 226161-226192 | 10 | 0.688 |
NZ_CP053417_2 | 2.3|2714525|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2714525-2714556 | 32 | NZ_CP054057 | Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence | 94603-94634 | 10 | 0.688 |
NZ_CP053417_1 | 1.7|2697826|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2697826-2697857 | 32 | NZ_CP024617 | Escherichia coli strain SMN152SH1 plasmid pO177A1, complete sequence | 464-495 | 11 | 0.656 |
NZ_CP053417_2 | 2.2|2714464|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT | 2714464-2714495 | 32 | NC_015223 | Nitrosomonas sp. AL212 plasmid pNAL21201, complete sequence | 62493-62524 | 11 | 0.656 |
1. spacer 1.10|2698009|28|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048420 (Sphingomonas insulae strain KCTC 12872 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.786
cgaggatagttgtaccaggtcaggccag CRISPR spacer cccggatacatgtaccaggtcaggccga Protospacer * ***** ****************..
2. spacer 1.4|2697643|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053574 (Citrobacter sp. TSA-1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781
attatg-gatatattcagcgatatactaacgga CRISPR spacer -ctgcgtaatatattcagagatatactaacggg Protospacer .*..* .********** *************.
3. spacer 1.4|2697643|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to HE858210 (Enterobacteria phage RB43, isolate RB43-GVA complete genome) position: , mismatch: 7, identity: 0.781
attatggatatattcagcgatatactaacgga CRISPR spacer tttcgcgatatattcaacgatatactcacggc Protospacer ** **********.********* ****
4. spacer 1.4|2697643|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to MT334653 (Buttiauxella phage vB_ButM_GuL6, complete genome) position: , mismatch: 7, identity: 0.781
attatggatatattcagcgatatactaacgga CRISPR spacer tttcgcgatatattcaacgatatactcacggc Protospacer ** **********.********* ****
5. spacer 1.4|2697643|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to HE981739 (Enterobacteria phage RB43, isolate RB43-GVA orf057::gfp complete genome) position: , mismatch: 7, identity: 0.781
attatggatatattcagcgatatactaacgga CRISPR spacer tttcgcgatatattcaacgatatactcacggc Protospacer ** **********.********* ****
6. spacer 1.4|2697643|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NC_007023 (Enterobacteria phage RB43, complete genome) position: , mismatch: 7, identity: 0.781
attatggatatattcagcgatatactaacgga CRISPR spacer tttcgcgatatattcaacgatatactcacggc Protospacer ** **********.********* ****
7. spacer 1.13|2698188|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017309 (Leptolyngbya sp. NIES-3755 plasmid plasmid1 DNA, complete genome) position: , mismatch: 7, identity: 0.781
tgcttcggtgtgggattgttcaacatgcgcgg- CRISPR spacer tgcttcggtttgggcttgttcaac-caggcgaa Protospacer ********* **** ********* .. ***.
8. spacer 1.13|2698188|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 8, identity: 0.75
tgcttcggtgtgggattgttcaacatgcgcgg CRISPR spacer ggtttcggtatgggattgctcaacatctgtgc Protospacer *.******.********.******* .*.*
9. spacer 2.3|2714525|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 8, identity: 0.75
ttaccgcattatatccatttaataatagcgtg CRISPR spacer ataagggattatataaatttaataatagcggc Protospacer ** * ******* **************
10. spacer 1.5|2697704|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 9, identity: 0.719
tgggtatgaatgaccaccgccagcgtcaactg CRISPR spacer ggggtttgattgaccaccgccagccgcccgcg Protospacer **** *** ************** * .*
11. spacer 1.12|2698127|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035508 (Haematobacter massiliensis strain OT1 plasmid pOT1-8, complete sequence) position: , mismatch: 9, identity: 0.719
ccggcgatgcgaagagctgccgtcacaattcc CRISPR spacer acggcgatgcgaagagcatccgtcggcagcgc Protospacer **************** *****. * . *
12. spacer 1.14|2698249|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719
aagagattaaaaatttatgcgaaggagttggg CRISPR spacer cagaaattaaaaatttaggcgaagaaataaaa Protospacer ***.************ ******.*.* ...
13. spacer 1.15|2698310|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NC_006872 (Clostridium perfringens plasmid pBCNF5603 DNA, complete sequence) position: , mismatch: 9, identity: 0.719
aataaatgtttcaggcggaaataaagccggga CRISPR spacer tataaatgtttaaggaggaaataagtatggct Protospacer ********** *** ********. .**
14. spacer 1.16|2698371|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NC_006872 (Clostridium perfringens plasmid pBCNF5603 DNA, complete sequence) position: , mismatch: 9, identity: 0.719
aataaatgtttcaggcggaaataaagccggga CRISPR spacer tataaatgtttaaggaggaaataagtatggct Protospacer ********** *** ********. .**
15. spacer 2.6|2714708|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to MN693211 (Marine virus AFVG_25M75, complete genome) position: , mismatch: 9, identity: 0.719
tactgctcatatgcttcatacatacccactat CRISPR spacer cccctataatatgcttcatacatacatactaa Protospacer . *. * ***************** .****
16. spacer 2.6|2714708|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to MN693477 (Marine virus AFVG_25M76, complete genome) position: , mismatch: 9, identity: 0.719
tactgctcatatgcttcatacatacccactat CRISPR spacer cccctataatatgcttcatacatacgtactaa Protospacer . *. * ***************** .****
17. spacer 2.6|2714708|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to MN693434 (Marine virus AFVG_25M407, complete genome) position: , mismatch: 9, identity: 0.719
tactgctcatatgcttcatacatacccactat CRISPR spacer catctataatatgcttcatacatacgtactaa Protospacer .*.. * ***************** .****
18. spacer 1.9|2697948|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049029 (Fluviibacterium aquatile strain SC52 plasmid pSC52_1, complete sequence) position: , mismatch: 10, identity: 0.688
acgctggccgaaaacggattttcaatccgcat CRISPR spacer acgcttgccgaaaccggattttccgtgtctgc Protospacer ***** ******* ********* .* . ...
19. spacer 1.14|2698249|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to AP014321 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C32, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688
aagagattaaaaatttatgcgaaggagttggg CRISPR spacer ttaaagttaaaaatttaggcgaagtagtttat Protospacer .*..*********** ****** **** .
20. spacer 2.2|2714464|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032696 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence) position: , mismatch: 10, identity: 0.688
cagaaaaagacgcattgcgcgaccagctttgc CRISPR spacer gcgcgaaagtcgcgttgcgcgaccagctcaag Protospacer * .**** ***.**************. .
21. spacer 2.3|2714525|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054057 (Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence) position: , mismatch: 10, identity: 0.688
ttaccgcattatatccatttaataatagcgtg CRISPR spacer acagaaaattatattcatttaataaaagcgcc Protospacer .* . *******.********** ****.
22. spacer 1.7|2697826|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024617 (Escherichia coli strain SMN152SH1 plasmid pO177A1, complete sequence) position: , mismatch: 11, identity: 0.656
gaattattccggcaattgggacaccattatgg CRISPR spacer cctgcgttccgtcaaatgggacaccattaata Protospacer ..***** *** ************* .
23. spacer 2.2|2714464|32|NZ_CP053417|PILER-CR,CRISPRCasFinder,CRT matches to NC_015223 (Nitrosomonas sp. AL212 plasmid pNAL21201, complete sequence) position: , mismatch: 11, identity: 0.656
cagaaaaagacgcattgcgcgaccagctttgc CRISPR spacer gctaaaaaaacgaattgcgcgaccaggacaag Protospacer *****.*** ************* . .
Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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DBSCAN-SWA_1 |
3372722 : 3381311
Sequences of DBSCAN-SWA_1
Nucleotide sequences of DBSCAN-SWA_1 >NZ_CP053417|3372722:3381311|DBSCAN-SWA GATGATTGAATTTAACCATGTCAGTAAAACCTTCGGCGATCAGCAGGCCGTCAGCGATCTCAACCTGCACTTTAGCGAAGGCAGCTTTTCGGTACTGATTGGTACTTCCGGCTCAGGAAAGTCAACCACGCTGAAAATGATTAACCGACTGGTGGAACATGACAGTGGGACGATCCGCTTTGCCGGGGAAGAGATCCGCAGTCTGCCGGTGCTTGAACTGCGCCGTCGTATGGGCTATGCCATTCAGTCAATCGGTCTTTTTCCTCACTGGACGGTGGCGCAAAATATCGCCACCGTACCACAACTACAAAAATGGCCGCGTTCGCGGATTAACGATCGTATTGATGAGTTGATGGCTTTATTGGGACTGGAAAGCACGTTGCGTGATCGCTATCCACATCAGCTTTCCGGCGGACAACAGCAGCGGGTCGGCGTCGCGCGGGCCCTGGCCGCCGACCCACAGGTCTTACTGATGGATGAACCTTTCGGTGCGCTGGACCCGGTTACCCGTGGCGCGTTACAACAGGAGATGACGCGCATCCATCGTCTACTGGGGCGCACCATCGTACTGGTAACGCATGATATTGACGAAGCGCTGCGTCTCGCCGACCATCTGGTGCTGATGGATGGCGGCAACGTTATTCAACAGGGATCGCCGCTTTCCATGTTGACCTCCCCTGAAAATGATTTTGTGCAGGCCTTTTTTGGCCGCAGCGAACTGGGTGTAAGGCTGCTTTCGTTGCGCAGCGTAGGCGATTATGTACGACGGCATGAGCAGCTAAGCGGCGACGCATTGGTGGAGGGCATGACGCTACGTGATGCGCTATCGATGTTTGTCGCGCGTCGGTGCGATGTTCTGCCCGTGGCTAATCAGCAGGGCGAACCCTGCGGTACGCTTCATTTCCGCGACTTGCTTTCGGAGACGTCCACCCGTGAAACGACTGGCTGATCCGTTGCTCTGGCTTATTGTTCTGTTTTTACTTCTGTTGTTTGGATTACCCTACAGCCAGCCGCTCTTCGGCGCGCTATTTCCCGATCTACCGCGCCCGGTCTACCAGCAGGAGAGTTTTATCGCCCTCGCACTCGCCCATTTCTGGTTGGTGGGCGTCTCAAGTCTGTTTGCTGTCGCCGTCGGGGTCGGCGCAGGGATTGCGGTCACGCGAGAGGGCGGGAAAGCGTTTCGTCCGCTGGTGGAGACTATCGCCGCCGTCGGGCAGACCTTTCCGCCGGTAGCCGTGCTGGCGATTGCAGTACCCGTAATGGGGTTTGGTCAGCAACCGGCGATTATCGCCTTGATCCTGTATGGCATATTGCCAATTCTGCAGGCAACGTTGGCAGGTCTGGGGGCAGTGCCTGCCAGCGTGATGAGCATTGCCTGCGGTATGGGCATGAGTCGCTGGCAACAGCTGTATCAGGTTGAATTACCGCTGGCCGCGCCGGTGATTCTGGCGGGTATCCGGACTTCGGTGATAATTAATATCGGTACGGCAGCCATTGCCTCAACGGTGGGAGCCAGTACATTAGGCACACCGATCATCATCGGGCTGAGTGGCTTTAATACGGCTTATGTTATTCAGGGGGCGGTGCTGGTTGCGCTGGCGGCGATCATTATCGATCGCCTGTTTGAAAGGCTGGGACACGCGATCACCCGGCATGCAAAATAAACGTATAACCTGCCAGCATCACGCCGCCGACGCCGCCGATAGCCATCAGCAGGAAAAGTGCGATCACACCGATTTTCGCTAAGCGCATTATGTACTCCTTATGTTAACAAAAGGAGTATACAATAAAGCTAATTTGTTAGCTTCTGTTTACGTGCCAAGGGGATAAATGTCGCGCCCCTGGGCGCGCCATGCTGTGAGCTGTTGCTGCTGCGCCAGCGTCTGGTTTTCTCCGCACCACACCAGTAACGTTTTGCCGTCAAACAACTCCGGGCGAAGCTGGTTGAGCGAATGGGCAAGCACATCAATGCGCCACCCTTGCTGGCTGGCGACCCAGCCTTCCAGCCACAGTCGCGTGGTGTCATGAATATTCCAGCCAACCACCAGCGCATCTTTACCTTGCTTTTTACGCGCAGACGCCAGGCAAAGCGCAATATAATTGATCAGTATACCGTCGAGAATCCCCAGTAACGCCTGTAGGGTTGGCTGTTGGCACTGTAATCGCCGCCGTAGAGGAACAAACAGATTAGTGGTCAACGTTTGTGCAGGGTAGTCCTGACCGCGTTCTTTGATCCATAGTCGCAGTCTGTGCAGATTATTGCTTTGTAAGTAGTGCAACAGAATTTCCTGTTGCTCGCGCCAGCCGTTAGGCTGGTCGCTGGTGTCATCGCTGTCGTTACTGAGCAGCACTTTTACCTTGCCGACCTGAACACCGTTATCTATCCAGCGCTTGATTTCGCGAATTCTGTCAATATCGGCATCGTTAAACAGACGGTGGCCGCCATCTGTTCGCTGCGGTTTTAAAAGTCCATAACGTCGCTGCCACGCGCGCAACGTGACAGGATTGATATCACAAAGCAAAGCCACTTCACCAATTGTGTAAAGCGCCATCGTCTCACCCTTGCTCGCGCGGTCCCGGTTTAACTTTAGACGCTCTTTTACGAACCAGGAAGTTTTGCCTGTTTTTTATGCATTAAAACGCGACGTCGCAGCGCGCGGCGGGGTGTTTAAGTGATCGTACTCACGAATTCATATTTTTATGTAACAGTTCAAAGAAAGTTAATCGTACTCAATGTATGTTACGCGCTTTTAATTAAAGTGTGGTTTGTGGGTATGTACGAGTTTAATCTGGTGTTGCTGCTGCTTCAGCAGATGTGCGTGTTTCTGGTCATTGCATGGCTAATGAGTAAAACGCGCCTGTTCATCCCGCTGATGCAGGTAACCGTTCGTCTGCCGCACAAACTCCTGTGCTACGTCACGTTTTCTATCTTCTGCATTATGGGCACGTATTTTGGGCTACATATCGAAGATTCGATTGCCAATACCCGAGCAATTGGCGCGGTAATGGGCGGTTTGCTCGGCGGGCCGATTGTCGGTGGGCTGGTTGGCCTGACCGGCGGATTACATCGGTACTCTATGGGGGGGATGACGGCGTTGAGTTGTATGATCTCCACCATCGTCGAAGGGCTGCTGGGCGGGCTGGTACATAGCGTTTTGATACGCCGTGGACGCCCGGACAAAGTGTTTAGCCCGCTGACGGCGGGGGCGATTACGTTTGTTGCTGAACTGGTGCAGATGCTGATCATTTTATTAATAGCCAGACCGTTTGAAAATGCCCTGCATCTGGTCAGTAATATTGCAGCGCCGATGATGGTGACAAATACCGTCGGCGCCGCGCTGTTCATGCGTATTTTGCTCGATAAGCGCGCCATGTTTGAAAAATATACGTCGGCATTTTCGGCAACCGCGCTGAAGGTCGCCGCGTCCACGGAAGGGATTTTGCGTCAGGGATTTAACGAAGTGAACAGTATGAAAGTGGCGCAGGTGCTATATCAGGAGCTGGATATTGGCGCGGTCGCGATCACCGATCGTGAAAAATTGCTGGCTTTTACCGGCATCGGCGATGATCACCATCTGCCAGGAAAACCCATTTCATCAGGTTATACGCTAAAAGCGATCGAAACCGGAGAAGTGGTTTACGCTGATGGCAATGAGGTGCCGTACCGTTGCTCGCTCCATCCACAGTGTAAACTGGGTTCGACGCTGGTGATCCCCCTGCGTGGCGAAAATCAGCGAGTGATGGGCACCATTAAATTATACGAAGCGAAAAACCGACTTTTCAGTTCAATTAACCGCACGCTGGGGGAAGGGATTGCGCAGCTTTTATCCGCACAGATCCTTGCCGGGCAGTACGAACGGCAGAAGGCGCTGCTGACGCAGTCAGAGATTAAACTGTTGCACGCACAGGTGAATCCACATTTTCTGTTTAACGCGCTAAATACCATTAAAGCGGTGATTCGTCGCGACAGTGAGCAAGCCAGTCAGCTGGTGCAATATCTTTCGACCTTTTTTCGCAAAAATTTAAAACGCCCGTCGGAAATTGTCACCCTGGCTGATGAAATTGAGCATGTAAACGCTTATCTGCAAATTGAGAAAGCGCGTTTTCAGTCGAGCCTGCAAATTCATCTTGATGTTCCACAGACGCTGGCGCACCAGAAATTACCGGCGTTTACGCTACAGCCGATTGTAGAGAACGCGATTAAACACGGTACATCGCAACTGCTTGATACCGGTAAAGTCTCTATTAACGCCCGGCGCGAAGGACAATATCTGATATTAGATATTGAAGATAATGCGGGGTTGTATATGCCTTCCGCCAGCGGCAACGGGTTGGGGATGAGCCTGGTGGATAAACGTCTGCGCGAACATTTTGGCGATGATTATGGCATTAGCGTGGTCTGCGAGCCGGACTGCTTTACCCGAATCACTTTACGACTTCCACTGGAGGAGGACGCATGATTAAAGTGCTGATTGTGGATGATGAGCCGTTAGCGCGAGAAAATCTGCGGGTTCTGCTCCTGGGGCAGGATGATATTGAGATCGTTGGCGAGTGTTCGAATGCGGTTGAAGCGATTGGCGCGGTGCATAAGTTGCGCCCGGATGTTCTGTTTCTGGACATTCAGATGCCGCGTATCAGTGGACTGGAAATGGTAGGAATGCTTGATCCGGAACACCGCCCGTATATCGTCTTTTTGACCGCATTTGATGAATACGCTATCAAAGCCTTTGAAGAGAACGCTTTTGATTATCTGCTCAAACCGATAGAAGAGAAGCGGCTGGAGAAAACGTTACATCGTTTGCGTCAGGAGCGTAGTAAACAGGATGTGTCATTGCTGCCGGAAAACCAACAGGCGCTAAAATTCATCCCCTGTACCGGGCACAGCCGGATCTATTTATTGCAAATGAATGATGTGGCTTTCGTCAGTAGTCGTATGAGTGGGGTCTATGTGACCAGTAGCGAAGGGAAAGAGGGATTTACCGAACTGACGCTGCGAACTCTGGAAAGCCGGACGCCGCTACTGCGCTGCCATCGCCAGTATCTGGTCAATATGGCTCATTTGCAGGAAATCAGACTGGAAGATAATGGGCAGGCAGAGCTGATGCTACGTAATGGTCTGACGGTGCCGGTGAGCCGCCGCTATCTGAAAAGTTTAAAAGAGGCGATTGGCCTGTGAAAGACTGTTAGAATATCGTTTTGCCATAGAAACGACCGAAGGTCTCATGCTGAGTAACGATATTCTGCGTAGCGTGCGCTACATTCTGAAAGCTAATAATACCGATCTGGTGCGCATCATGGCGCTGGGTAACGTTGACGCTACGCCGGAGCAGATTGCAGTCTGGCTGCGCAAAGAAGAGGAAGAGGGGTTTCAGCGTTGCCCGGATATCGTATTGTCCTCTTTTCTTAACGGCCTCATTTACGAAAAACGTGGCAAAGATGAGACGGCGCCAGCGTTGACGCCGGAGCGTCGCATCAACAACAACGTGGTACTGAAAAAGTTGCGTATCGCCTTTTCGCTAAAAACGGATGATATTCTGGCGATACTTACCGGCCAGCAGTTCCGCGTCTCGATGCCGGAGATCACTGCCATGATGCGTGCGCCGGACCACAAAAACTTCCGGGAATGTGGCGACCAGTTCCTGCGTTATTTCCTGCGCGGCCTGGCGGCGCGCGAACATGCGGCGAAAGCCTGAGTTGGACTGCCCGGTGTCGGATAGCAACGTGAGCGTTTTATCCGGCCTGCCAATCATATTTCCGAATGCAGGCCTGATAAGCGCAACGCTATCAGGCAACACAATACAAGGTCTGTTGCCTGCCTGCACGTCTGCCGGTTATTTCGTTTCTTTAAAACCCGCGGCTTCCAGCAGCGTCTGGGTTTGTTTCATGCTGATGCCCTTACTGGTATCGCCGGACACCATCGTCCCTGAAACGCCCTGTAAGGCCTTGAAGTCTACTTTTTCCATATCCACAGAGACGTTTTCCTGGGCATAGGTCTCTTTATAGGTGAGTTTTTCTTCCACTCCGGCGATATTTTTATATTTCGCACTCAACGGATCGAGAATTTTAGCCGCTTCTTCTTTTGTTTTGGCGCCTACCGTGGCATAGCTGATTTTACTTTCAGACGTCTGCTTAAGAATTTTGTCGCCTTTATAGGTATAAGTAATGGAGATTTCTGTACCCGCCAGGTTAGCGTTAAAGGTTTTTGATTCTTCTTTATCGCCGCAACCAGCAAGAGTGAATACCAGTACGGAAGTCAATGCTGCGGATAATAACTTGCCAGAAATTTTCATCTAAAACTCCGTTTTATATAATGATTGGGTTTTTAAAATAATTACAATGAATTAATTTGACCCACAAATAGCAATGTATCAGGGGGAACAGGATATGACTTTTAGCGGTTATTTAGCAGTCCGGATATGGATTATTAACGCTATTGCTTATTAAGGAAAAAATTAAAATGCGCAGGATAGATACTGCCTGAAGCCTGGCTGGATAAGGGGGCGTCGCCACCCGGATGAATCTGATAAAAAAGCCGGAGTATACTCCGGCTGATTGCTTATTTTACTTGCTGACCCGGCTTCGCGCCGTCATCAGGGCTTAACAGGAAGATGTCTTCCCCGCCCGGACCTGCTGCCATTACCATTCCCTCGGAAACGCCAAAGCGCATTTTGCGCGGTGCGAGATTAGCGACCATAACCGTCTGGCGGCCAATCAGCGCCTGCGGGTCCGGGTAGGCGGAGCGGATACCGGAGAAGACGTTACGCTTCTCGCCACCCAGATCCAGCGTCAGACGCAGCAATTTGTCAGAGCCTTCCACCAATTCGGCGTTTTCAATCAATGCTACGCGCAGGTCAACTTTGGCGAAATCGTCAAAGGTGATGGTTTCCTGAATCGGGAAGTCGGCTAACGGGCCGGTAACCGGCGCAGCGGCAGCTTTCACCTCTTCTTTCGACGCTTCAACCAGCGCTTCAACCTGTTTCATGTCGATGCGGTTATACAGCGCCTTGAAGGTATTCACCTTGTGGCCGAGCAGCGGCTGTTGGATGGTATCCCAGCGCAGTTCGCAATTCAGGAACGCCTCTACGCGCTCTGAAAGGGTCGGCAGCACCGGCTTCAGATACGTCATCAGGACGCGGAACAGGTTGATACCCATGGAACAAATGGCTTGCAGATCTGCGTCGCGGCCTTCCTGTTTGGCAACCACCCACGGCGCTTGTTCGTCCACATAGCGGTTAGCCAGGTCAGCCAGCGCCATGATTTCGCGGATCGCCTTACCAAACTCCCGGCTTTCCCACGCTTCGCCAATCCCTGCCGCAGCGTCAGTAAACGTTTTATACAACTGTGGATCGGCCAGATCAGCGGCCAGCACACCGTCAAAACGTTTGTTGATAAAACCGGCGTTACGCGAGGCCAGGTTAACCACTTTATTGACGATATCGGCATTAACGCGCTGCACAAAATCTTCCAGGTTCAGGTCGATGTCATCAATGCGTGAAGAAAGCTTGGCGGCGTAGTAGTAGCGCAGGCTGTCAGCATCAAAGTGTTTCAGCCAGGTGCTGGCTTTAATAAAGGTGCCGCGCGATTTGGACATCTTCGCGCCGTTCACCGTGACGTAACCGTGAACGAACAGGTTGGTCGGCTTACGGAAGTTGCTGCCTTCCAGCATGGCAGGCCAGAACAGGCTGTGGAAGTAGACGATATCTTTGCCGATGAAGTGATACAGCTCGGCATCGGAGTCTTTCTTCCAGTACTCTTCAAAGCGGGTTGTGTCGCCACGCTTATCGCACAGATTTTTGAAGGAACCCATATAACCTATCGGCGCATCCAGCCAGACATAGAAATATTTGCCCGGCGCGTTGGGGATTTCGAAACCAAAGTACGGCGCATCGCGGGAGATATCCCACTGTTGCAGGCCGGATTCAAACCATTCCTGCATTTTGTTGGCGACCTGTTCCTGAAGCGCGCCGCTGCGCGTCCACGCCTGTAGCATTTCGCTGAAAGAGGGAAGGTCAAAGAAGAAGTGTTCGGAATCGCGCATGACCGGCGTCGCGCCAGAAACCACCGATTTCGGTTCGATCAGCTCGGTCGGGCTGTAGGTCGCGCCGCACACTTCGCAGTTGTCGCCGTACTGATCCGCCGCTTTACATTTCGGACAGGTGCCTTTCACAAAACGATCCGGCAGGAACATGCCTTTTTCCGGATCGTAAAGCTGAGAGATGGTGCGGTTTTTAATAAAACCGTTCTCTTTCAGTCGAGTGTAGATAAGCTCTGACAGCTCGCGGTTTTCATCGCTATGGGTAGAGTGATAGTTATCATAGCTAATGTTAAAGCCAGCGAAATCCGTCTGATGCTCCTGGCTCATCTCGCCAATCATCTGCTCAGGCGTAATACCAAGCTGTTGCGCTTTCAGCATAATAGGCGTGCCGTGGGCGTCGTCGGCGCAGATGAAGTTGACCTCGTGGCCGCGCATTCGCTGGTAACGGACCCAGACATCAGCCTGGATGTGCTCCAGCATATGGCCGAGGTGGATAGAGCCGTTGGCGTACGGCAGCGCGCACGTTACCAGAATTTTCTTCGCGACTTGAGTCAT
Protein sequences of DBSCAN-SWA_1 >NZ_CP053417|3372722:3381311|3372722_3373670_+|WP_020844710.1|DBSCAN-SWA MIEFNHVSKTFGDQQAVSDLNLHFSEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGTIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWTVAQNIATVPQLQKWPRSRINDRIDELMALLGLESTLRDRYPHQLSGGQQQRVGVARALAADPQVLLMDEPFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLADHLVLMDGGNVIQQGSPLSMLTSPENDFVQAFFGRSELGVRLLSLRSVGDYVRRHEQLSGDALVEGMTLRDALSMFVARRCDVLPVANQQGEPCGTLHFRDLLSETSTRETTG >NZ_CP053417|3372722:3381311|3375495_3377181_+|WP_000272843.1|DBSCAN-SWA MYEFNLVLLLLQQMCVFLVIAWLMSKTRLFIPLMQVTVRLPHKLLCYVTFSIFCIMGTYFGLHIEDSIANTRAIGAVMGGLLGGPIVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLLGGLVHSVLIRRGRPDKVFSPLTAGAITFVAELVQMLIILLIARPFENALHLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSGYTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQKALLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRPSEIVTLADEIEHVNAYLQIEKARFQSSLQIHLDVPQTLAHQKLPAFTLQPIVENAIKHGTSQLLDTGKVSINARREGQYLILDIEDNAGLYMPSASGNGLGMSLVDKRLREHFGDDYGISVVCEPDCFTRITLRLPLEEDA >NZ_CP053417|3372722:3381311|3378552_3379011_-|WP_079793809.1|DBSCAN-SWA MKISGKLLSAALTSVLVFTLAGCGDKEESKTFNANLAGTEISITYTYKGDKILKQTSESKISYATVGAKTKEEAAKILDPLSAKYKNIAGVEEKLTYKETYAQENVSVDMEKVDFKALQGVSGTMVSGDTSKGISMKQTQTLLEAAGFKETK >NZ_CP053417|3372722:3381311|3377943_3378414_+|WP_020844709.1|DBSCAN-SWA MLSNDILRSVRYILKANNTDLVRIMALGNVDATPEQIAVWLRKEEEEGFQRCPDIVLSSFLNGLIYEKRGKDETAPALTPERRINNNVVLKKLRIAFSLKTDDILAILTGQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAAREHAAKA >NZ_CP053417|3372722:3381311|3374365_3374473_-|WP_001234243.1|DBSCAN-SWA MRLAKIGVIALFLLMAIGGVGGVMLAGYTFILHAG >NZ_CP053417|3372722:3381311|3374532_3375273_-|WP_001240383.1|DBSCAN-SWA MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVGKVKVLLSNDSDDTSDQPNGWREQQEILLHYLQSNNLHRLRLWIKERGQDYPAQTLTTNLFVPLRRRLQCQQPTLQALLGILDGILINYIALCLASARKKQGKDALVVGWNIHDTTRLWLEGWVASQQGWRIDVLAHSLNQLRPELFDGKTLLVWCGENQTLAQQQQLTAWRAQGRDIYPLGT >NZ_CP053417|3372722:3381311|3373653_3374385_+|WP_000824740.1|DBSCAN-SWA MKRLADPLLWLIVLFLLLLFGLPYSQPLFGALFPDLPRPVYQQESFIALALAHFWLVGVSSLFAVAVGVGAGIAVTREGGKAFRPLVETIAAVGQTFPPVAVLAIAVPVMGFGQQPAIIALILYGILPILQATLAGLGAVPASVMSIACGMGMSRWQQLYQVELPLAAPVILAGIRTSVIINIGTAAIASTVGASTLGTPIIIGLSGFNTAYVIQGAVLVALAAIIIDRLFERLGHAITRHAK >NZ_CP053417|3372722:3381311|3379277_3381311_-|WP_171923252.1|tRNA|DBSCAN-SWA MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSDENRELSELIYTRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKAADQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDTTRFEEYWKKDSDAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKMSKSRGTFIKASTWLKHFDADSLRYYYAAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLAADLADPQLYKTFTDAAAGIGEAWESREFGKAIREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPTLSERVEAFLNCELRWDTIQQPLLGHKVNTFKALYNRIDMKQVEALVEASKEEVKAAAAPVTGPLADFPIQETITFDDFAKVDLRVALIENAELVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQALIGRQTVMVANLAPRKMRFGVSEGMVMAAGPGGEDIFLLSPDDGAKPGQQVK >NZ_CP053417|3372722:3381311|3377177_3377897_+|WP_000598645.1|DBSCAN-SWA MIKVLIVDDEPLARENLRVLLLGQDDIEIVGECSNAVEAIGAVHKLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEENAFDYLLKPIEEKRLEKTLHRLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMNDVAFVSSRMSGVYVTSSEGKEGFTELTLRTLESRTPLLRCHRQYLVNMAHLQEIRLEDNGQAELMLRNGLTVPVSRRYLKSLKEAIGL |
9 | Enterobacteria_phage(66.67%) | tRNA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
|
Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
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