CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP040694	Elizabethkingia sp. JS20170427COW chromosome, complete genome	2 crisprs	cas3,cas9,cas1,cas2,DEDDh,cas12a	0	18	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP040694_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040694_1

244568-246741

TypeII

Consensus_repeat	Method
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	PILER-CR
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CRISPRCasFinder

28 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP040694_1

>merge|NZ_CP040694|1|244568-246741|PILER-CR,CRISPRCasFinder
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACCAACTCCGAGAATCAAAGGTTTTGCAATGGGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACCAGCTGCATCTACTACAGATGTCTGCAAAAGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACAATGGTCTTGTTTCTACATTTCTTGAAAGCGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACGCTCGCACGGATAGAGCTTCTCAGGCTATTGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACGCTCGCACGGATAGAGCTTCTCAGGCTATTGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACTGTCTTAAAGTGGCTTTTTTCGGTCTTTCAGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACATCTTCCGGAGTTGACAAAAAGTCAAGAAGGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACGCAATAGTGTGATTGATTATAGTAGCCGTTGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACGTGATTTTAAAGTTTTCATTTTGTAAAATTGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACTTTTATCCTTTACTTTCTTTCTTATTACCTGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACGCACTTTATTGCAGGCCTGATGTATCCAAAGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACTCATTATTAGTTGTAAAGATAAAGAAGAAAGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACGAAATGTACAATATACAATTTCGCCTGAAGGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACCTCAAAATGCTTTAGGATTAGCGCAAACACGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACAGGAAAACTCTTCTAGCTTGAAATTTTCTGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACTCGCAATGTAAAGTGGTGCGTCTAATTCTTGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACGAATTTCTCCAGTTAAAGCCTTTACTGTTTGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACTATTGACGGTTTCTACTTGGCGCCCAATTTGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACCGGTATTAGTACAGCGCTCATCTATAAATAGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACAAAGAACATCGCCACCAAAAAGGACAGCTTGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACCTCTTATATCATAATGTATAAAAGATTTATGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACTGAAGCCGTTTTACAAAGTTGGGCGTAATGGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACCAGCACAATTAATTAACGATGGCAGAACCAGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACCCTTAGCGATTTCTTTCAAAGCATCGATAAGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACTGCGTACAGTTGCTCCTGAACGTGTTTTTGGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACTAGAGTTGCTCTTCGCTGCTTGTTTATATCCGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACCCTTTTACTTCCCTTCCTAATTCATCTTTGGTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAACGACCAGATTAGGAGTCTTTTTAGGCTTATGGTTGCGACGTATCGCGAATTTAAAAATTTTGAAATCCAAGCTAAAG

>NZ_CP040694|1|1|244568-246512|PILER-CR
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CAACTCCGAGAATCAAAGGTTTTGCAATGG
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CAGCTGCATCTACTACAGATGTCTGCAAAA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	AATGGTCTTGTTTCTACATTTCTTGAAAGC
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GCTCGCACGGATAGAGCTTCTCAGGCTATT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GCTCGCACGGATAGAGCTTCTCAGGCTATT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TGTCTTAAAGTGGCTTTTTTCGGTCTTTCA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	ATCTTCCGGAGTTGACAAAAAGTCAAGAAG
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GCAATAGTGTGATTGATTATAGTAGCCGTT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GTGATTTTAAAGTTTTCATTTTGTAAAATT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TTTTATCCTTTACTTTCTTTCTTATTACCT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GCACTTTATTGCAGGCCTGATGTATCCAAA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TCATTATTAGTTGTAAAGATAAAGAAGAAA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GAAATGTACAATATACAATTTCGCCTGAAG
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CTCAAAATGCTTTAGGATTAGCGCAAACAC
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	AGGAAAACTCTTCTAGCTTGAAATTTTCT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TCGCAATGTAAAGTGGTGCGTCTAATTCTT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GAATTTCTCCAGTTAAAGCCTTTACTGTTT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TATTGACGGTTTCTACTTGGCGCCCAATTT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CGGTATTAGTACAGCGCTCATCTATAAATA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	AAAGAACATCGCCACCAAAAAGGACAGCTT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CTCTTATATCATAATGTATAAAAGATTTAT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TGAAGCCGTTTTACAAAGTTGGGCGTAATG
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CAGCACAATTAATTAACGATGGCAGAACCA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CCTTAGCGATTTCTTTCAAAGCATCGATAA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TGCGTACAGTTGCTCCTGAACGTGTTTTTG
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC

>NZ_CP040694|1|1|244568-246741|CRISPRCasFinder
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CAACTCCGAGAATCAAAGGTTTTGCAATGG
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CAGCTGCATCTACTACAGATGTCTGCAAAA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	AATGGTCTTGTTTCTACATTTCTTGAAAGC
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GCTCGCACGGATAGAGCTTCTCAGGCTATT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GCTCGCACGGATAGAGCTTCTCAGGCTATT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TGTCTTAAAGTGGCTTTTTTCGGTCTTTCA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	ATCTTCCGGAGTTGACAAAAAGTCAAGAAG
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GCAATAGTGTGATTGATTATAGTAGCCGTT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GTGATTTTAAAGTTTTCATTTTGTAAAATT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TTTTATCCTTTACTTTCTTTCTTATTACCT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GCACTTTATTGCAGGCCTGATGTATCCAAA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TCATTATTAGTTGTAAAGATAAAGAAGAAA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GAAATGTACAATATACAATTTCGCCTGAAG
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CTCAAAATGCTTTAGGATTAGCGCAAACAC
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	AGGAAAACTCTTCTAGCTTGAAATTTTCT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TCGCAATGTAAAGTGGTGCGTCTAATTCTT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GAATTTCTCCAGTTAAAGCCTTTACTGTTT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TATTGACGGTTTCTACTTGGCGCCCAATTT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CGGTATTAGTACAGCGCTCATCTATAAATA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	AAAGAACATCGCCACCAAAAAGGACAGCTT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CTCTTATATCATAATGTATAAAAGATTTAT
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TGAAGCCGTTTTACAAAGTTGGGCGTAATG
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CAGCACAATTAATTAACGATGGCAGAACCA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CCTTAGCGATTTCTTTCAAAGCATCGATAA
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TGCGTACAGTTGCTCCTGAACGTGTTTTTG
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	TAGAGTTGCTCTTCGCTGCTTGTTTATATCC
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	CCTTTTACTTCCCTTCCTAATTCATCTTTG
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAAGCAATTCACAAC	GACCAGATTAGGAGTCTTTTTAGGCTTATG
GTTGCGACGTATCGCGAATTTAAAAATTTTGAAATCCAAGCTAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040694.1\|WP_138981312.1\|249966_250194_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040694.1\|WP_138981319.1\|262176_262476_+\|integration-host-factor-subunit-beta	unknown	unknown	gnl\|CDD\|259858
NZ_CP040694.1\|WP_138981303.1\|229506_229851_+\|50S-ribosomal-protein-L20	unknown	unknown	gnl\|CDD\|179959
NZ_CP040694.1\|WP_138981316.1\|255866_258437_-\|DUF5117-domain-containing-protein	unknown	unknown	gnl\|CDD\|379818
NZ_CP040694.1\|WP_138983308.1\|234825_237249_-\|transketolase	unknown	unknown	gnl\|CDD\|223101
NZ_CP040694.1\|WP_138981310.1\|243768_244107_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP040694.1\|WP_138981307.1\|233986_234817_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|181618
NZ_CP040694.1\|WP_138981311.1\|247137_247707_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040694.1\|WP_138983310.1\|247713_249837_+\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|223551
NZ_CP040694.1\|WP_138981313.1\|250293_251058_-\|response-regulator	unknown	unknown	gnl\|CDD\|225818
NZ_CP040694.1\|WP_138981314.1\|251189_252509_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|373012
NZ_CP040694.1\|WP_138981308.1\|237769_242179_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|375967
NZ_CP040694.1\|WP_138981306.1\|232225_233278_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|366736
NZ_CP040694.1\|WP_138981304.1\|229936_231316_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP040694.1\|WP_138983309.1\|242878_243787_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP040694.1\|WP_138981309.1\|242271_242862_+\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP040694.1\|WP_138981315.1\|252522_255861_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP040694.1\|WP_138981305.1\|231302_232220_+\|dTDP-glucose-pyrophosphorylase	unknown	unknown	gnl\|CDD\|133024
NZ_CP040694.1\|WP_138981317.1\|258542_260120_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|377675
NZ_CP040694.1\|WP_138981318.1\|261088_262129_-\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115

Protein	Function_ID	Function_description	E-value
NZ_CP040694.1\|WP_138981319.1\|262176_262476_+\|integration-host-factor-subunit-beta	gnl\|CDD\|259858	cd13836, IHF_B, Beta subunit of integration host factor (IHFB). This subfamily consists of the beta subunit of integration host factor (IHF) and IHF-like domains. IHF is a nucleoid-associated protein (NAP) that binds and sharply bends many DNA targets in a sequence specific manner. It is a heterodimeric protein composed of two highly homologous subunits IHFA (IHF-alpha) and IHFB (IHF-beta). It is known to act as a transcription factor at many gene regulatory regions in E. coli. IHF is an essential cofactor in phage lambda site-specific recombination, having an architectural role during assembly of specialized nucleoprotein structures (snups). IHF is also involved in formation as well as maintenance of bacterial biofilms since it is found in complex with extracellular DNA (eDNA) within the extracellular polymeric substances (EPS) matrix of many biofilms.	1.72517e-31
NZ_CP040694.1\|WP_138981303.1\|229506_229851_+\|50S-ribosomal-protein-L20	gnl\|CDD\|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	4.2345e-63
NZ_CP040694.1\|WP_138981316.1\|255866_258437_-\|DUF5117-domain-containing-protein	gnl\|CDD\|379818	pfam16313, DUF4953, Met-zincin. This is a family of uncharacterized proteins that carry the highly characteristic met-zincin mmotif HExxHxxGxxH, the extended zinc-binding domain of metallopeptidases.	2.80487e-139
NZ_CP040694.1\|WP_138983308.1\|234825_237249_-\|transketolase	gnl\|CDD\|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	1.93019e-69
NZ_CP040694.1\|WP_138981310.1\|243768_244107_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	4.542e-23
NZ_CP040694.1\|WP_138981307.1\|233986_234817_-\|OmpA-family-protein	gnl\|CDD\|181618	PRK09038, PRK09038, flagellar motor protein MotD; Reviewed.	3.1443e-30
NZ_CP040694.1\|WP_138983310.1\|247713_249837_+\|cation:proton-antiporter	gnl\|CDD\|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	1.83325e-60
NZ_CP040694.1\|WP_138981313.1\|250293_251058_-\|response-regulator	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	2.20017e-26
NZ_CP040694.1\|WP_138981314.1\|251189_252509_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|373012	pfam14322, SusD-like_3, Starch-binding associating with outer membrane. SusD is a secreted polysaccharide-binding protein with an N-terminal lipid moiety that allows it to associate with the outer membrane. SusD probably mediates xyloglucan-binding prior to xyloglucan transport in the periplasm for degradation. This domain is found N-terminal to pfam07980.	5.78577e-36
NZ_CP040694.1\|WP_138981308.1\|237769_242179_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|375967	pfam18541, RuvC_III, RuvC endonuclease subdomain 3. Cas9 proteins are abundant across the bacterial kingdom, but vary widely in both sequence and size. All known Cas9 enzymes contain an HNH domain that cleaves the DNA strand complementary to the guide RNA sequence (target strand), and a RuvC nuclease domain required for cleaving the noncomplementary strand (non-target strand), yielding double-strand DNA breaks (DSBs). The crystal structures of type II-A and II-C Cas9 proteins highlight the features in Cas9 enzymes that support their function as RNA-guided endonucleases. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. The RuvC domain forms the structural core of the nuclease lobe, a six-stranded beta sheet surrounded by four alpha helices, with all three conserved subdomains (I, II, III) contributing catalytic residues to the active site.	1.79311e-54
NZ_CP040694.1\|WP_138981306.1\|232225_233278_+\|phosphotransferase	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	4.55417e-10
NZ_CP040694.1\|WP_138981304.1\|229936_231316_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.8883e-18
NZ_CP040694.1\|WP_138983309.1\|242878_243787_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.43623e-89
NZ_CP040694.1\|WP_138981309.1\|242271_242862_+\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.000504706
NZ_CP040694.1\|WP_138981315.1\|252522_255861_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_CP040694.1\|WP_138981305.1\|231302_232220_+\|dTDP-glucose-pyrophosphorylase	gnl\|CDD\|133024	cd04181, NTP_transferase, NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.	1.75914e-18
NZ_CP040694.1\|WP_138981317.1\|258542_260120_-\|histidine-kinase	gnl\|CDD\|377675	pfam06580, His_kinase, Histidine kinase. This family represents a region within bacterial histidine kinase enzymes. Two-component signal transduction systems such as those mediated by histidine kinase are integral parts of bacterial cellular regulatory processes, and are used to regulate the expression of genes involved in virulence. Members of this family often contain pfam02518 and/or pfam00672.	4.09068e-25
NZ_CP040694.1\|WP_138981318.1\|261088_262129_-\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	4.24488e-102

>NZ_CP040694.1|WP_138981310.1|243768_244107_+|CRISPR-associated-endonuclease-Cas2
MESERLNAYRIMWVMVLYDLPTETKAMRKAANLFRKKLEDDGFALFQFSIYIRHCPSRENANVHIERVKKMLPKAGKVAIMCITDKQFGDIEIFSAQSKEEPPPTWQQLELF
>NZ_CP040694.1|WP_138983309.1|242878_243787_+|type-II-CRISPR-associated-endonuclease-Cas1
MITRSIYIGNPAYLKLKDEQMYILDPSTHAMKGKIAVEDLGVLMLDHFQITLTHQLIQRMMENNVVVISCNYYHLPHGIMLPLYGHTEHSQKVKFQLEASEPLKKQLWKQTVEAKIENQKHVLKRLGNYYEPMEYYLQNVKSGDTTNMEGIAAQHYWKYLISLDFIRDRYGDYPNLFFNFGYSVLRSMIARAIVETGLLPVLGIFHKNKYNPYCLADDLMEPYRPFADLLVMQWIEKSPTVEELNQDFKAYILRIATMDVRINDKMRPLMVGIKITTSSLYKCYTGEKRLIAYPELPWNPND
>NZ_CP040694.1|WP_138981309.1|242271_242862_+|transposase
MIPLEFGRYYHIYNHANGEDLLFREEKNYTFFLEKYHKYLDSVVETIAWCLMPNHFHLLVRIKSDEEIADHPGFENLDGLSDKEKSNLISKQFSNFFNSYTKAFNKVYQRRGSLFLKNFKRKEITDDKYFRNLILYLHNNPVHHRFTTDFEKYPWTSYQSFIHQQSDYLIQYFDDVKNYHHAHKIYHTTIEMEFEE
>NZ_CP040694.1|WP_138981308.1|237769_242179_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MAKKILGLDLGTNSIGWALVNLEEQKILGMGSRIIPMDAGDMGKFAEGGSISQTAKRTGYRGVRRLRERHLLRRERLHRVLHILKFLPTHFDAQIDFEKRFGKIKPGIEPKIAFSKDGFLFKDSFNKMLEDFKTRQPDFLKGKNGEDVLVPYDWTIYYLRKKALTQKIEKEELAWIILNFNQKRGYYQLRGESEDEDKKEIKEFCKLLKVVAIEKGDVDKKNNKKSWYKLIFDNGWEYSATFSTEPNWINSEREFLITEEYDENNNIKIVKDKRSDKTGKEKRRITPLPSFDEINLMSKKDQDKIYKKIKARTEFTIRNSNTTVGTYIYDHLLLNPKQKIKGKLVRTIERKFYKEELKQILIKQKDFHPELQDENLLMDCIRELYKNNKQHQQQLSSKDFVHLFLEDIIFYQRPLRSQKSLISNCSLESRTYTDKEGKEHLQPLKVVSKSNPYFQEFRLLQWLQNLAFYKKEDDTNVTSELLPSSRDWEELLDFLNQRKEVDQKQILDFLLKKKLDVKKLPKGETEKYRWNYVEDKTYPCNETRYLIQSKLDKVQEVLSGFLTFEKEMELWHIIYSVNDKIEYEKALRKFAAKNNLDEASFVDSFKKFPPFKSDYGSFSEKALKKLLPLMRFGSSWSWDSISKESQARIEKIITGEVDDKIADKIRDLALKHQLVNEQDFQGLPLWLAQYIVYGRHSEATISGKWNSPTELEAFLKNFKQHSLRNPIVEQVITETLRVVKDIWSYYGSGAKDYFSEIHIELGRDMKNTAEERKRLTNQVTENENTNLRIKALLAEMALDGNVENVRPYSPSQQEILKIYEEGALNSDIEIDEAILKISKTPQPSSSDLKRYKLWLEQKYRSPYTGQIIPLNKLFTSSYEVEHIIPQSRYFDDSFSNKVICEAEVNKLKDKQIGLEFIKNHHGEKVTIGNKTVQILEVSAYEDFVKKNYAKNRSKRNKLLLEDIPEKMIERQMNDTRYISKYISNLLSNIVRDERPGANDDGFNSKNLIPGNGKITTRLKQDWGLEAVWNELILPRFERMNTLTKTNDFTKWNEKYQKFLPTVPLELSKGFSKKRIDHRHHAMDALVIACASRDHINLLNNESALPKKNRSKEEQKKFRIDLQKKLRNQESYLDKDGVKRTSFTEFYKPWENFTVDAKNALENIVVSFKQNTRVINKATNYYEKYVEKNGEMIKTKVPQEGINWAIRKPLHKETVSGKIHLDYVKVAKGKILTATRKSLDTTFNEKTILSITDTGIQKILLNYLKAKGSPELAFSPEGIEELNENIKSYNDGKYHQPIFKVRIFEQGSKFPLGETGNKQAKFVEAAKGTNLFFAVYADENGKRSFDTIPLNIVIERQKQGLSSVPEINEKGDRLLFHLSPNDLVYIPTDDRFDNLNSNNIYKMVSCTGSECHFIPFRIASLIKNYDAKTKVGEFGSLNKQELSESLLNPVRVKEKCIKLKVDRLGNISNA
>NZ_CP040694.1|WP_138983308.1|234825_237249_-|transketolase
MENSQVTFEDFKNQILEDYKLSRISREMSLLGRREVLTGKAKFGIFGDGKELPQIAMSRVFRNGDFRSGYYRDQTFAMAVGALTPESFFASLYADTSVERDPASGGRQMNGHYATRSLNEDGSWKDLTQIKNISSDISPTAGQMPRLLGLAAASNYYQNNTFPGSERFSKGGKEVAFGTIGDASTAEGHFWETINAACALQVPMVMSIWDDGYGISVPTQNQRAKADLSEMLQGFQRKAGGNQGCEIIKVKAWDYPALQEAYQKAEYYAREERVPVIVHVTEVTQPQGHSTSGSHERYKSTERLAWEADHDGLKKFREWILNYEIEIDGNKITLATNEDLDAIEKEAKKITKNSQKSAWEAYQNSIKEIKEKALPCVEKLALASKNSEKVNAELEKFKNLISIAKKEIFHLVRRSLWVTRGEDLQERVALKAIYTEMAEVEEDNYSSHLYSESQWKATNIAEVKPKYEENSQWVDGRIVVRDNFDKILEKYPEFLIFGEDSGNIGDVNQGLEGLQQKYGADRVADTGIREATILGQGIGLAMRGLRPVAEIQYLDYILYCLQGMSDDLATVHYRTKGGQKAPVIIRTRGHRLEGIWHSGSPMAGILNLVKGIYVLVPRDLTKAAGFYNTMMQSDDPCLIVEPLNGYRLKEKMPSNIGEFTVPVGKVEVTKEGKDVTVVTYGSTWRIVMEAAKELENLGIEIEVIDAQSLMPFDIEHKIVESLKKTNRLVVIDEDVAGGTTAYMLQHIIEQQGGFRYLDSAPLTISAKEHRPAYASDGDYFSKPSADEMIEKIYGLMNESNPVKYPKI
>NZ_CP040694.1|WP_138981307.1|233986_234817_-|OmpA-family-protein
MKNLIRTVLVGGVALTLASCGTQKKLDALQLNYQQCLETAGQKESTIQTQKVKITSLEDQLALLKDQNGILKQSLADCAATSSKGSTNIAQLISQIKESQDYIKRLQDARSKQDSLNLAISNKLKRSLDNLNDQDVDVKVQKGVVFISLSDNMLYKSGSYEILPTAENVLSKVATVINDYSDYDVLVEGHTDTDAMKPNALIKDNWDLSALRATSVVRTLQTKFGVNPSRMTAGARSQYVPKADNNTAAGKAANRRTEIIVLPKLEQFMELINAKR
>NZ_CP040694.1|WP_138981306.1|232225_233278_+|phosphotransferase
MNYSTILNTFITTQESDNVSIQAITDGHINTTLQVSILENGDTKHYILQKINHYIFKNPKAIMNSIEVVNQHLHQNGYPYERLETIPNLKGELLSIDENGNYWRMTKYIPNTYCVTKVENKEQAYEAAQTLSVFYSKILDLNPELIESSIPGFIDFEKRINDYKKALEAASDSRIQEAQSEIDFINLHLDLPNRFVENQKNGNFPLRVVHADPKISNVLFDNDSHKGRCVIDLDTLMPATILYDFGDMVRSYTNLREEDDPIADNIFSKEYFDAVKEGFLSHTSESLTDFEKQNLDYAGQVVVFIQAVRFLTDFLDNDQYYKINYPTHNLDRTKNQINLVKELLKLEPAL
>NZ_CP040694.1|WP_138981305.1|231302_232220_+|dTDP-glucose-pyrophosphorylase
MKTTKNATLLVLAGGLGSRYKGKKQIDPMGPSGECLMEYSIYDAARAGFTQLVLIINDYFNQETKDHFQQIADNAGIQLDFVVQRLNTKLPIHHEDKLENRVKPWGTGHAILAAKDVIKNPFVVINADDYYNRHAFEKAYELIASDKINEHQYGMVSYPLSATLSENGSVSRGVCTINNGQLVTVVEHTNINKEGDKIICTLDDNSKKELAPETLVSMNFWVLDPSIFNVLERKFDQFLSNLKSEKAEFFIPFVIDEMVHEEGLKVVVETSKDKWFGVTYPEDKQLAINSIQELVSNGVYPSALW
>NZ_CP040694.1|WP_138981304.1|229936_231316_+|Gfo/Idh/MocA-family-oxidoreductase
MKNSVNRRDFLKTTSMAGLGALIPAHSLFDSSSFNAKKVRIGFIAVGLRGQTHVYNMAKRDDVEIVAFADPDPKMVEMAQKILKDNGKPAAKVYGNGDYDYRNLLKDKKIDAVFVSSPWNWHRAHGVEAMKAGKIVGMEVSGAINMDECWDYVDTSEKTGVPLMALENVCYRRDVMAVLNMVRKGMFGELVHGTGGYQHDLRPVLFTKGKDGKGVAFGEDGYSESKWRTQHHIDRNGDLYPTHGLGPLHTMMDINKGNRLVRLSSFASKARGLHQYIVDKAGEDHPNAKIQWKKGDIVTTTIQCHNGETIVLTHDVSLQRPYNLGFKVQGTRGLWEDIGWGDFNQGFIYFEKLMNHSHKWESSEKWMKENDHPMWKKYEEKAKGAGHGGMDYFLDNTFIECIKRNEPFPLDVYDLATWYAITPLSEKSVAENGTVQEIPDFTRGKWKTAKNIFAINEDY
>NZ_CP040694.1|WP_138981303.1|229506_229851_+|50S-ribosomal-protein-L20
MPRSVNAVASRARRKKVLKQAKGFFGRRKNVWTVAKNAVEKAMQYAYRGRKEKKRNFRSLWITRINAGAREHGMSYSQFMGALKKNNIELNRKVLADLAMNHPEAFKAVVDQIK
>NZ_CP040694.1|WP_138981311.1|247137_247707_+|hypothetical-protein
MKYTIPSFILVLTMISCNNVEKEKILHKREKDLAEREALLSKKEALFQSLLKMRDSIQSVSQKDSTQTSILPSELLGEWSSKIICYETNCPEYAIGDNRVESWFFTNDSLGSYVKSIHNKQERLYSVQSNDRQILLNYSSVPAPNRKVNVNINLNEISPNKIKGTKIISLEDGKCNSKFSVELTKTQKL
>NZ_CP040694.1|WP_138983310.1|247713_249837_+|cation:proton-antiporter
MHLLNIHSLTLPLEDPILKFLVVLIIILSAPLLLNKIKVPHLLGLIIAGAVIGPNGLNILPRDSSIVVSGTTGLLYIMFLAGLEIDMGDFKKNKWKSLTFGLYTFCIPLGLGILLSHYILGFPYLTSLIFASIFSTHTLISYPIVGKLGLVKNRAVNITVGGTMITDIFALLILAVVVGVTQGDVNTAFWVKMAVSFTIFGIVVLGGFPIIGRWFFKKVQDKISQYIFVLVMIYLAALFAEIAGLEAIIGAFFAGLALNRLIPHTSILMNRIEFVGNAIFIPFFLISVGMLIDFSVFFKDAETIKVIVLMTVVAVVSKYIAALLTQKTFKFNPLERGLIFGLSTSHAAATLAVVMVGYNIIIGETDSGKPIRLLDESVLNGSIVLILISCTLSSFITQSAGEKMLLEDDEEKINDTNQPNENILLALSYDNTVDPMVNLGVSMKSKNQERKLYALNVINDAQEESSEKHSEKLLKKATDNASAIDIQVNTMKRYDDNIMRGISNVVKEQKISDLIFGLEKNKGFSPSFLLNFYNSKLFEAETNIFIYHAFQPMATIKKYTIVIPPNSEKNRGFLSSLLKIWNLAKNSGAKFVFLTTENIIQLLKRIIAKSNIDAEFKVHNQWRNLEPIMKQKTENHAFVFFMFKPEPNLFFFRMKNIPEMINKNLTESNYLLVYPYSTPFVDEDSKLVSNHGDYVKIGNMISSLFRT
>NZ_CP040694.1|WP_138981312.1|249966_250194_-|hypothetical-protein
MREKMWVPVYEGELLEEVEKLKRKLEENEISTELEKGPMSFPFSSENDSFKLKVEVHDEAKAFQIIDDFFNENTN
>NZ_CP040694.1|WP_138981313.1|250293_251058_-|response-regulator
MRVAIIEDELLALNYLKNIVEEQNIIQVIEIVALRSKKQAIDFFSKNEVDLIFMDIHLGDGKSFEIFEQVELFTPIIFITAYDEYALKVFRHFTIDYLLKPFEEDDLYRALHKFASIRENYSPNTTLQGMSKLVNHHDEVNRFLVNDGNKLVSLREEDIAYFFASGKYLFITTREGKTYLYEDTIKDIITKLNPLLFFKINRKYIVHIDAIQEVIKHSSQKIELKLNPIPEVRDEVYVSKIQIPEWKVWMYDRV
>NZ_CP040694.1|WP_138981314.1|251189_252509_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKKIITILGVIALSFTVTSCDRFLDITPEGKVIPTTVEDYQKVLVSAYAKYPTHKSLTALRTDELVLDNNSMDFASLREIAMWKDSNLDQVTTEFPWVSFYTVNFYLNQIINEGSKTMAGGNERNQILAEAYALRAYTYFDLVNLYGKPYNSTTASSDRGVPISLEIDLEKVLPASSVQEVYQQIHADLTKAEELMITEKQVAGENFHFSKVALKALQARVALYQQDWQKALDYANQALAINNQLVDLNSSDVIPNRYDAAESILALDLALNNSVQNVGYASQDLLNSYTDSDKRFDLYFERNGDQYKVKKGGSTDYRVSFRTAELYFIKSEALLKLNKLQEAKEALLPVLKTRYNATGYAELQSQVNAMNNSAFMSFILEERFREFALEGQRWYDLRRANQKTITHEVNGKEYILQQNDVRYTIEIPQSAKKNNPYLQ
>NZ_CP040694.1|WP_138981315.1|252522_255861_-|SusC/RagA-family-TonB-linked-outer-membrane-protein
MKKSLVLLPLLAASFAYAQEKRVITGTVQDGATSKGLVGASVKIDAQTVSSSTQQKGIIESVSVGTITTKNGQFSLEIPADTKSVSISFPGYEAENIEILSGQDHYTVKLMSVQTSKKEGNIQEVVLTGYQKIEKRKLTSAINTVKMDDIQQAGVASVDQLLNGQIAGVAVTPETGAPGSPAKIRIRGTASLSGPQDPLWVIDGLPLEGNDVPDFSDKENIDQLQNFSIAGLNPNDIEDITILKDAAATAIYGARAANGVISITTKKGRKGSMRINFNADTFINFRPDFEKLNLLNASEKVDLELMLAKRTDLTYRTDKGEVMRILTENNQLDAFRNGGLEALNPLTLQQLNTLRNSNTDWGKLLYKTAINKQYGVSLSGGSDRSDYYFSVGYYDEEGTTIGTGFERLNLTLKNNYKVTDNLNLGISIFGTDSEKTSFMSDADASANPVNYSRNANPYLKPFNADGSHNYDKDIDGFEDRYIPFNFLEERNNTSYSLKSRSLKAILDLEYKLAKGLKITSQLGVQYDSNKTEKFAGQETYFTRKMKENTRYYQNGAYKYFLPDGAIKQNWDNDFYQYNWKLQALYSTKIGSRHEIDLMAGSEIRKTEDRTTVTRAFGYNPETGRATAIEFPSSSFASDKRYETYREMPVMENAYASWYATASYTLDKKYTVFGSVRYDGTNLFGVNKKYRYLPIWAASASWLVSKENFMQNVDFISNLRLRASYGLQGNIDRNTSPFFIGEYSDTTILPGNKQDIINVLSPPNGKLRWEKTTNTNFGLDLGLFNNRINITADVYNRKGTDMISMKETPLETGFEYSMVNWGSLTNKGFELALTTRNINHDKFKWTTTINFAHNKSEVLDEQVRDNSLLPSRVGLPVNAVFALKTAGIDANGNPLFWKGDQKVSAEEFFKLYDQWADFYPGQLVGSELTNKETRDLFTYIGDKDPKFTGGIINNFKFSNFDLTISAAFNLKQTVMKTPSYRGMELDPGRNYTQDIWQAGITLPGITSPDNYANPDGWMANKWFAGNNANTYSLLDIWAKEISYLRISSIRLGYTIPKEFTRNLGISNVRLSIEGRNLFVFSNGYDGYFDPETYGNIYAQPITKSVTFGVNVSF
>NZ_CP040694.1|WP_138981316.1|255866_258437_-|DUF5117-domain-containing-protein
MNMMKHYRLAIYLGLALSTTTVYAQKKDDVKSDKDKTEKTDSSKKIKKIEDLIKKGTYKKGMFNTITKDTDVYFEIPDSLMGRQFLVVNKISQVPMQVNEAGLNKGMNYENKVITFHHDKVAKKVWVKTSTPKVSSPENDAITLSVKENFAESIIEVFDVEAQNADSTSVAIKVNKIFDGNKKSFNDVLANTGLGGSVKSDLSKIDAVKTFPENVVVKSQLTTSVNEGGVDLPVTLGVTSNIVLLSEKPMQPRFADNRVGYFTESHWYFNDGQQKMEDKKLITRWRLEPKDEDKEKYLRGELVEPKKPIVYYIDPATPKQWRDKIIAGVYDWQVAFEKAGFKNAVIAKMPDENDKNFDIDDVRYSVITYVASPKANAMGPSVVDPRSGEILESDIVWWHNVMTSLHDWMRIQTGPIDPKARGNKFSDEHMGEAIRFVSSHEVGHTFGLKHNMGASFAYPVESLRSKEFTDKMGGTAPSIMDYARYNYVAQPEDGVTAITPKIGVYDKYAIEWGYRWYPDQNTEKVALKKMIEAHQDDPLYFYGEQQAFLDTVDPRSQSEDLGNDAVLASEYGMKNLKRVLDNLLSWTYEEGKSYEDAGKLYFGVVGQWDTYNHHVMANVGGIYLDQPVFGNQKKAYEAVPAAMQRKAVHYLTRNVIDLPKWLFFNPILEKTYAIKKSPMGPYEQSPYTLAREMQYSVIYYLFTDDRLLRMLENELKKEELGTKEEVYTVTDLFNQVREAAFDKKGSLSILERMTQKNYVDALIVSTNKLFEKTTMKGITIDGNLQIPTLCMHDEEEHGLRNINYSSMKRVSEVTSYKRAELQAVLKLVNKKKNSGDATTQAHYADLITRINEALKQ
>NZ_CP040694.1|WP_138981317.1|258542_260120_-|histidine-kinase
MQLKLKHSLSQKSIYLIALVVGVLVVCSLAVLSFLISRESRKNNEDFAMKSFERKYEALEREFLGIEEYQQLLKSLAERNNIEKPNNHFSILNELNHYQKLKRFNWAFQLNTAGKEELQKQILQQAIPKNQKGDFKWVKTYGSQTIPNLLVDYQDSLYWVNFDSLRSSQKTVYFGSTLNLDDLHEYLAKANQSQNNYAYIFTKNGICITHPEQKFIGKDVFSFTTLTAKDTLTHATSLGFTQGKTNSEYLNLEVTRFIKPLKTANFDGYIAVNYVNLLIDENVNVVRKYVAFFFIATFLLIVIVFVLFHKATNEAYLEKEKVEKEKNKLLIDNEKMHKKNAFIQLQQLKNQINPHFLFNSLNSLYMLIALDKVKAQRFTMNLSKIYRYLIVPPKGNLVQLKEELDFINQYMDLQKSRFQDELSFHVNINAEKALEKKLPYLALQVIVENALKHNIATIDQPLEIFIEINSDGLFVKNTYQLKHEFQQGEKFGLEYLQKTYSFFNKSKFYARKEGRYFICYLPLVE
>NZ_CP040694.1|WP_138981318.1|261088_262129_-|A/G-specific-adenine-glycosylase
MKNNIEKALFVKLTWKIISWYLFHGRKLPWRETKDPYKIWISEIILQQTRVTQGMQHYLNFIERFPTVEDLHNASNDEVMLYWKGLGYYSRALNLHAASHQIVEEYQGEFPTSFLDLQQLKGVGKYTAAAIASICFQEKVPAIDGNFYRFFSRIFADGFDISSPKAYSYFYELILPYVPEIEPGDFNQAIMDLGATICKPKNPECEICPVKEDCLASQIGKVDAYPVKTKKVKAQDLDLTYYLIKNKEYFLARKRGDDFIWKNLYELAPSIPDDWQDNIVSYKNIKHKLTHKNLNIDLYVVEIEDEDFHQFAKDASYIIMTWEESHQFSFPKPLEMVLELYSEVEN
>NZ_CP040694.1|WP_138981319.1|262176_262476_+|integration-host-factor-subunit-beta
MTKAELVNTISNKLGVEKNDTQKVIEAFMQEIKTSLYNNDNVYLRGFGSFVIKTRAAKTGRNISKNTAIEIPAHNIPSFKPSKMFAEKVKTKVKVENEK

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Crispr_ID: NZ_CP040694_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040694_2

1566837-1566960

Orphan

Consensus_repeat	Method
GGTCCTGTTGAAAACAAAGGATGCCCTTGGCCAGATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040694_2

>merge|NZ_CP040694|2|1566837-1566960|CRISPRCasFinder
GGTCCTGTTGAAAACAAAGGATGCCCTTGGCCAGATACTGATGGTGATGGTGTATTAGACAAAGATGATAAATGTGTAGACGTAGCAGGTCCTGTTGAAAACCAAGGATGCCCTTGGCCAGATA

>NZ_CP040694|2|2|1566837-1566960|CRISPRCasFinder
GGTCCTGTTGAAAACAAAGGATGCCCTTGGCCAGATA	CTGATGGTGATGGTGTATTAGACAAAGATGATAAATGTGTAGACGTAGCA
GGTCCTGTTGAAAACCAAGGATGCCCTTGGCCAGATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040694.1\|WP_138982389.1\|1565500_1565959_+\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|376590
NZ_CP040694.1\|WP_138982388.1\|1563790_1565413_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|237894
NZ_CP040694.1\|WP_138982387.1\|1562939_1563653_-\|3-ketoacyl-ACP-reductase	unknown	unknown	gnl\|CDD\|236074
NZ_CP040694.1\|WP_138982399.1\|1576111_1576858_+\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP040694.1\|WP_138982382.1\|1558115_1558649_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040694.1\|WP_138982398.1\|1575100_1576087_-\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|376676
NZ_CP040694.1\|WP_138982394.1\|1571234_1572242_-\|AAA-domain-containing-protein	unknown	unknown	gnl\|CDD\|223786
NZ_CP040694.1\|WP_168186893.1\|1562236_1562398_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040694.1\|WP_138982391.1\|1567596_1568343_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NZ_CP040694.1\|WP_168186891.1\|1557938_1558112_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040694.1\|WP_138982395.1\|1572245_1573376_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040694.1\|WP_138982386.1\|1561987_1562188_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040694.1\|WP_168186892.1\|1559289_1559811_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP040694.1\|WP_138982392.1\|1568441_1569776_-\|trigger-factor	unknown	unknown	gnl\|CDD\|272913
NZ_CP040694.1\|WP_138982385.1\|1559800_1561912_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|225183
NZ_CP040694.1\|WP_138982383.1\|1558786_1559290_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040694.1\|WP_138982393.1\|1569896_1571228_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP040694.1\|WP_138982400.1\|1576924_1577230_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379642
NZ_CP040694.1\|WP_138982397.1\|1574159_1575104_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040694.1\|WP_138982396.1\|1573417_1574170_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP040694.1\|WP_138982389.1\|1565500_1565959_+\|SsrA-binding-protein-SmpB	gnl\|CDD\|376590	pfam01668, SmpB, SmpB protein.	2.36355e-74
NZ_CP040694.1\|WP_138982388.1\|1563790_1565413_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
NZ_CP040694.1\|WP_138982387.1\|1562939_1563653_-\|3-ketoacyl-ACP-reductase	gnl\|CDD\|236074	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional.	3.40351e-124
NZ_CP040694.1\|WP_138982399.1\|1576111_1576858_+\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	1.65707e-16
NZ_CP040694.1\|WP_138982398.1\|1575100_1576087_-\|stage-II-sporulation-protein-M	gnl\|CDD\|376676	pfam01944, SpoIIM, Stage II sporulation protein M. SpoIIM is on e of four stage II sporulation proteins that is necessary for the forespore inside the mother-cell to be properly internalized through the breakdown of peptidoglycans trapped between the membranes of the septum separating the forespore and the mother-cell. The four proteins working in sequence are SpoIIB, pfam05036, SpoIIM, SpoIIP, pfam07454, and finally SpoIID, pfam08486. D, M and P are in a complex with each other and the complex assembles in a hierarchical manner such that M, which serves as a membrane anchor, recruits P to the septum and P, in turn, recruits D to the septum.	4.99723e-26
NZ_CP040694.1\|WP_138982400.1\|1576924_1577230_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379642	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase. This family of GCN5-related N-acetyl-transferases bind both CoA and acetyl-CoA. They are characterized by highly conserved glycine, a cysteine residue in the acetyl-CoA binding site near the acetyl group, their small size compared with other GNATs and a lack of of an obvious substrate-binding site. It is proposed that they transfer an acetyl group from acetyl-CoA to one or more unidentified aliphatic amines via an acetyl (cysteine) enzyme intermediate. The substrate might be another macromolecule.	2.72133e-13
NZ_CP040694.1\|WP_138982391.1\|1567596_1568343_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	1.67162e-110
NZ_CP040694.1\|WP_138982394.1\|1571234_1572242_-\|AAA-domain-containing-protein	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.42652e-99
NZ_CP040694.1\|WP_138982392.1\|1568441_1569776_-\|trigger-factor	gnl\|CDD\|272913	TIGR00115, tig, trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome. [Protein fate, Protein folding and stabilization].	1.5615e-39
NZ_CP040694.1\|WP_138982385.1\|1559800_1561912_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|225183	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms].	3.28849e-133
NZ_CP040694.1\|WP_168186892.1\|1559289_1559811_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	7.88595e-12
NZ_CP040694.1\|WP_138982393.1\|1569896_1571228_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.17823e-48

>NZ_CP040694.1|WP_138982389.1|1565500_1565959_+|SsrA-binding-protein-SmpB
MKIERTVNIVNRRARFEYEILEEYEAGIVLYGTEIKSLRSSKASIAESFCEIKNGELWVVNMMIDEYKMGSFYNHKAKRDRKLLLHRQEIMRLEKKVKDVGFTIIPLKLYINNNGKAKLLIGFGRGKKLYDKRETIKKRESDRNLDRIRKNF
>NZ_CP040694.1|WP_138982388.1|1563790_1565413_-|ATP-binding-cassette-domain-containing-protein
MLTVSNLSLQFGKRVLFDDVNIKFTKGNCYGIIGANGAGKSTFLKILSGVQESTTGHVSLEPGKRMSVLEQDHFAYDEFTVLETVLRGNKKLFEIKEEMDALYMKPDFSDEDGIKAGELGVIYEEMGGWTAETDAQSMLSNVGIKEDAHYKMMSELENQDKVRVLLAQALFGNPDVLILDEPTNDLDIDTIAWLEDFLAGYENTVIVVSHDRHFLDAVCTHIGDLDYSKLNLYTGNYSFWYQASQLATKQRQQANKKAEEKKKELQDFIARFSSNVAKAKQATARKKMIDKLNIEDIKPSSRRYPAIIFEQEREAGDQILEVKDLEKTKDGELLFSKVDLNLKKGDKIAVLSRNSMAITEFMEIITGNDTADKGSFQWGVTTKQSYMPLDNSEFFKDDISLVDWLRQFVQTDEERHEEYVRGFLGKMLFSGDEALKSCTVLSGGEKMRCMFSRMMLQKANILVLDEPTNHLDLESITTLNNSLENFKGTVLLSSHDHEMLQTVCNRVIELTPKGIIDRYMTYDEYLSDKKVKELREQYYA
>NZ_CP040694.1|WP_138982387.1|1562939_1563653_-|3-ketoacyl-ACP-reductase
MTLNGKNAIITGGSRGLGKAVATLLAKEGVNIGISGRNEESLKSAVAELEQLGIKAFYAVFNVDEEAEVKKGIALLAEKLGSIDILINNAGIGTFGKLAEMPSQDWEQVIKTNLFGVYYTAQAVHPYMKENGSGDIINVASTAGLKGGAGMSAYAASKAAVISLSQSMMAEWRKENIRVITLTPSTIATDMSIDGGLTDGNPDKVLQPEDFAEWVRDILKMNRRALIANGSIFSTNP
>NZ_CP040694.1|WP_168186893.1|1562236_1562398_+|hypothetical-protein
MQNIEGSGFIDGVCIGIGVVSAVSMFTPAAPAGITALGVASGMCTGYAIYQIL
>NZ_CP040694.1|WP_138982386.1|1561987_1562188_+|hypothetical-protein
MKKLEVLQMENLQGGVDCFTGLGISVGLILGGALLTSTAFGAGVGMYMVGAGSLMLSGGNCVGAFN
>NZ_CP040694.1|WP_138982385.1|1559800_1561912_+|ATP-binding-cassette-domain-containing-protein
MGNKKLVEKTFSLQKDLTDCGVGCLQSLMRYYGGDISLETLREKSGTAKTGTTLLGLYQCANEIGFKAEGCEADVNALIEHGEPVILHVILENKYEHYVVCYFRIDSKDNQFLIGDPAKGIETWSQEYLEEVWKTKTCLTLKPKENFVKVSETKKEKLKWLKELIIRDKEAVYTIIILGAIFTLLGMAMSIFSQKLIDDILPKRKINVLMLSIGFLGFLLLGRVVVQALRELYIIKQSKEFNQRINLKFYSSLLNLPKLFFDTRKVGDFVARLNDTQRIQNVIRTLITNTATDVLGVLISIGFLFYYSWKLALFCLLVSPLVFYLIFRFNKKIIESQRNVMQAYSGNEANYIDSIRGIDVVKGFSKQNLFLKRNEIFYKNFQNKIFELGKLNLKITLYSGIALVFILLGILAFSSYNVLTGETKVGELMAIIGIASSLLGSITNLALVSIPIQEARVAFDRMFEYSSLEKEKTEGEIITELNSVEIKNLDFRFNGRSRLLNNISLKLEKGKIICLLGESGSGKTTLTEILQKNYFPENGNIIVNDQKDLNNVSLGSWRNLISIVPQNIQLFNGNVLENIILDDQLDDKKLQSIASLGFDKFIHSLPQGFMTLVGEEGINLSGGQKQLLGWMRALYHQPKFLILDEPTSSLDLINRNFIYDLIKKLKEEVVIFIISHHSEDVSKIADDIFVLENTQISKLSMVY
>NZ_CP040694.1|WP_168186892.1|1559289_1559811_+|TlpA-family-protein-disulfide-reductase
MKNKKLLGISAILIPVVLIGILIYLYAGLQKKKEKIEALNKIPTFSVQDINGATVTEKNIPEGNKVLVYFNSECGYCQMEMQELSQINEKHQDINWIMFTDKPLKEIQQFAEKYHLDKVKNVKWCNDPKSEVYLKFAMTGIPYFLGYNAENKLVHRSTGATKIEKILTDFDGK
>NZ_CP040694.1|WP_138982383.1|1558786_1559290_+|hypothetical-protein
MESQKKWWWVSYAVMPLLIGIKVLLVAFCLNFIKLFDLPGLEKVEFKDFLFIVLVAEFIFIIAGFYKFVNFYWIEPNFTLEDLQTYYPISLINLREYISTEKWMAYPLQITNLFEVFYWVILVYGITELSENKVKFGKAFSLVSITYGVGLLFWVGIVCFIILSAQY
>NZ_CP040694.1|WP_138982382.1|1558115_1558649_+|hypothetical-protein
MQEKELQVYNKKFTKVKAFLGYYYMPFSLEELFLFFPYLALILIIILSTFFADIKILIKIFVILVHVFLFFYIILGRFFKILKTNLSQDINRNIINIILDKEIVFDNQNNDLFMIKNTTGRFLGNEYIVVMCRNNYIYIKNSYTRTIFPYKSKKIRGITNGIKILVKNYKKKQLHKF
>NZ_CP040694.1|WP_168186891.1|1557938_1558112_+|hypothetical-protein
MKKLDVVQMESLQGGKAKPKCDDWGYVGAAAGVSALACVASGPLGFATFAAFMMACD
>NZ_CP040694.1|WP_138982391.1|1567596_1568343_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRAFEYRKATKMARWDKMAKTFSKIGKDIALAVKAGGPDPDSNPALRRCIQNAKGANMPKDNVERAIKKASGADADNYEEITYEGYGQGGVAFFVECTTNNPTRTVANVRAVFNKFDGNLGKNGELSFLFDRKGIFTLDKAQIKGEWDDFEMEMIDGGAEEIEIDEEENIVHITTAFEDFGTLSHKLEELGVEATSSELQRIPNMYKEVSLEQGLSNLKMLNRFMEDDDVQNVYHNMEMTDELLDAQ
>NZ_CP040694.1|WP_138982392.1|1568441_1569776_-|trigger-factor
MKVTNINHDEVSALLTVTLDKSDYKEKVDKTLLNYAKSANIPGFRKGKAPLSMIRRQYEAGVAYEEINKQVNDALNNYINENNLRLVGQPIPQPVDEFDYNKDQISVSFEVGYEPNITIDLAKYEAPHYKVEASDKEINQSIENMQKRFAERVAQEKITKDSYIALQIEQVVEEDAEGEHQHAPKHVTINKDNKETFALVKGLKAEGSVNVTKEDLAAKEDLAKELGFTVAEVEHLHHNEVKVSVKEIYSLDLAELNQDLFDKVYGAETISSEEELKAKVKEELDEYFQQNADVHYVNKMLEQIVEKEEIQLPETFLKKWLMFNNQNIQSEEQAQEILENEKPTIKYQIIEGKLMNDNDVKIDYSDILAQSEQLVKNQLAIYGIHHLSDEEIQKYAVEMLKDQEQVRQISSEVAMAKLKDVILEKGGKKEEAISHDQFLEEIKK
>NZ_CP040694.1|WP_138982393.1|1569896_1571228_-|DUF58-domain-containing-protein
MFRNLFLLPKIFVILTIVGIGYILAFFYPILLNGVHGASILFLAMVAVDIFLLFRATEGIEATRILPDKLSNGDENTISFHLKNNYPFTSHLEIIDELPIQFQIRDFQLFKKIQPKKSLSFSYPLYPKERGIYTFGKLNIYAQSPLGLVSKRYQFSNQQNLSCYPSFIHLKKYEMISLKSNQLMGNLKKQRKIGHSSEFEQIREYVTGDNIKNINWKATGKQNKLMVNQYQEEKSQRIYLFIDKGRSMKTPFDGLSLLDYSINAAMALSHIILKKQDRAGMVSFSKKVENMVVADHKNGQLKRIAEGLFNIKTNFSESDFNRLYIETQHKITQRSFILLFTNFETLDALKRQLPYLRGIAKKHLLLIVFFKNSLLQELKNPKENTHTALEVYDEIIAEKFDFEKKLIQQELLKYGIYSLYTLPHELNLELIHQYLEIKSRGSL
>NZ_CP040694.1|WP_138982394.1|1571234_1572242_-|AAA-domain-containing-protein
MEHYQPENTNATSADFTNRIDLKPLHEKINQIKGEISKVIVSQESMINQLIVALLSNGHVLLEGVPGVAKTITAKLLAKTIDVGFSRIQFTPDLMPTDILGTAVFNVKQTEFEFKKGPIFSNLILIDEINRAPAKTQSALFEVMEERQITMDGNTYHMEEPFLVIATQNPIEQEGTYRLPEAQLDRFLFKVNIGYPGLQEEIEIVKKQHQLHNDNKVDLINTIISANELKEYQQLIKKIIIEEKLLEYIAQITVNTREHRFLYLGASPRASIALLNASKGFAALYGRDFVTPDDIKEAANAVLCHRVILSPEREMEGMKVEEVIQQIVNSIEIPR
>NZ_CP040694.1|WP_138982395.1|1572245_1573376_-|hypothetical-protein
MILLAVLQLNKKPIIDWNRNFGLQNKAPFGLSIFNHEANDLFQNKIIRINQQAHDFYSESNHLKKHNILIVPRRTESIDTESWKIILKKVKEGSNLMILTYEIPETLSQELEIDHYNLSFIEGKENILHFTDASRSSQLMMNRLPFGLGLMKLGNPHTKILGTVSSQNNPYQLANFILIPKGKGKIYLHLEPLFITNYYLLQNHQYAEDVFSYLPLDLETYWFIRKKEAHNPSPLGFILQNPALKYTWYLLLAGSLFFIIFHAKRKQRVIPILPKVENTSVEFVRNISNLYLNEGNAEEMMYKKTLYFLHKIREELLIDTSILDEEFAHKLHVKTNAPTEQITAAIIMIKEVLERKHQYQEKDLISYNQLLNQIYH
>NZ_CP040694.1|WP_138982396.1|1573417_1574170_-|hypothetical-protein
MKNKLFIFFILYGFFFGFSQRTTPPQHQPEKTLYSVDSILQENYKTEEKKFSHHFQKNFTKKYKGNEYDYQITKSKESLWEKLIRQLKKWLSTRGMEKQFAWGIFKFLAFAILAIVLFFILKIIWAKQGNWVFSKKNKTINTPELYFDENIYDLQLDHLITESENKQNYRLAIRYLYLSDLTYLDSIGEIDLQQKLSNREYLWSIKSPRYRKDWTQLILIFENIWYGERNISLESYLKYKKAFEQFSQEK
>NZ_CP040694.1|WP_138982397.1|1574159_1575104_-|hypothetical-protein
MITFYKKRKFDALLSDTFTFVKIYGKSYFKNYFAINGIIISLLLIIISLGYGEIIQQYLSGNANGEIYLFEQYLDHNKLLLGISTTISVILFLIFSIINYSFPILYIKRLAETKVSKISLAESTQDLKTNFLSLILFFITTLLFIGVLSVFLFAISSYSALFTVVFFLLLLALPVLINIINFAFYDYIFAKRSIISSFIKACNIQFSKNFGKYYLSTLLLYFIIQIILSIFTFIPLLLSMFLSLSIVDFSQKPDASAEFLMMIVIVIYLISITGGIILGNLLYINTGLMYFDSREDLHQKEALQEIEMIGNNEK
>NZ_CP040694.1|WP_138982398.1|1575100_1576087_-|stage-II-sporulation-protein-M
MREIAFIKQNKEKWLEVENFILGKVKKNPDELSSLYINLINDLSYSQTFYPKSKTTVYLNYLSTQIYQKIYKTQRVKENRIKAFFATEVPLIVYENRKTLALSFIIFSLFVAIGMLSTLYDPEFSTSILGEDYINMTIENIKSGNPVGVYQSGSNWGTAFGIIQNNLAVSAKLFIYGIFGGLGTLYILMNNGIMLGTFQTLFYQYQSLGQSMRGIWIHGAFEIFAIVIDGFAGLVLGAFILFPKTYSRLHSFKSGFNKAFKIYLSTVPFIIVAGILEGFITRYALKMNIVLNLIIILGSFAFIGYYYLIYPKIVFQKTSKNFSQKTKS
>NZ_CP040694.1|WP_138982399.1|1576111_1576858_+|RDD-family-protein
MNSVEINTSQNVKLKFEIAGIGSRMMAFIIDMLIKLAYLIVMWMVWTKFFNFNTLSKNIGNWEIMAIIGMITMPINFYSLAFESLMEGQTPGKMLMKIKVIQIDGYQAHFSSYLSRWFFRLVDIMVGAGIIGFIAILVDKYNRRLGDMVAGTAVISLKNRFNINHTILVNLEEDYVPRFPQVIALSDDDIRIVKDNLQRYSAQKNGEVMAKLSSKIKEITQISYDPEEFTDKAFIYKVIQDYNFYSSK
>NZ_CP040694.1|WP_138982400.1|1576924_1577230_+|GNAT-family-N-acetyltransferase
MENHEVKFETIQTQNGGYISAVGHQSNEIGKLTFTIVPETQTMVISYVMVFPKYEGKGYGKVLVMEAVQYARKHKYSIQPHCSFSKSVLNRMKEEVKDVYL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP040694_1	1.21\|246133\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246133-246162	30	AP013358	Uncultured Mediterranean phage uvMED DNA, complete genome, group G1, isolate: uvMED-CGR-U-MedDCM-OCT-S27-C45	11285-11314	3	0.9
NZ_CP040694_1	1.12\|245450\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245450-245479	30	MT774409	CrAssphage cr131_1, complete genome	80286-80315	4	0.867
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	CP033552	Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-2, complete sequence	67255-67284	5	0.833
NZ_CP040694_1	1.10\|245298\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245298-245327	30	MN693654	Marine virus AFVG_250M1181, complete genome	55206-55235	5	0.833
NZ_CP040694_1	1.12\|245450\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245450-245479	30	NZ_CP034818	Paracoccus sp. Arc7-R13 plasmid unnamed8, complete sequence	8521-8550	5	0.833
NZ_CP040694_1	1.21\|246133\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246133-246162	30	AP013515	Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-U-MedDCM-OCT-S27-C25	28353-28382	5	0.833
NZ_CP040694_1	1.27\|246590\|30\|NZ_CP040694\|CRISPRCasFinder	246590-246619	30	NZ_MG973074	Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence	109119-109148	5	0.833
NZ_CP040694_1	1.6\|244994\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	244994-245023	30	NC_014841	Pantoea sp. At-9b plasmid pPAT9B04, complete sequence	89019-89048	6	0.8
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	MN693375	Marine virus AFVG_25M113, complete genome	13068-13097	6	0.8
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	NZ_CP024249	Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence	138633-138662	6	0.8
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	AP014272	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S46-C191, * SEQUENCING IN PROGRESS *	6252-6281	6	0.8
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	MN693547	Marine virus AFVG_25M424, complete genome	24649-24678	6	0.8
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	MN693598	Marine virus AFVG_25M403, complete genome	21780-21809	6	0.8
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	MN693297	Marine virus AFVG_25M423, complete genome	20744-20773	6	0.8
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	MN693353	Marine virus AFVG_25M425, complete genome	6083-6112	6	0.8
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	MN693440	Marine virus AFVG_25M540, complete genome	20669-20698	6	0.8
NZ_CP040694_1	1.10\|245298\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245298-245327	30	MN694724	Marine virus AFVG_250M441, complete genome	5902-5931	6	0.8
NZ_CP040694_1	1.10\|245298\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245298-245327	30	MK250029	Prevotella phage Lak-C1, complete genome	142744-142773	6	0.8
NZ_CP040694_1	1.10\|245298\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245298-245327	30	MK250019	Prevotella phage Lak-A2, complete genome	105598-105627	6	0.8
NZ_CP040694_1	1.21\|246133\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246133-246162	30	MN855959	Siphoviridae sp. isolate 167, complete genome	16240-16269	6	0.8
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NC_018278	Burkholderia phage KL1, complete genome	24753-24782	6	0.8
NZ_CP040694_1	1.27\|246590\|30\|NZ_CP040694\|CRISPRCasFinder	246590-246619	30	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	469766-469795	6	0.8
NZ_CP040694_1	1.3\|244766\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	244766-244795	30	NC_006909	Leptospirillum ferrooxidans ATCC 49879 plasmid p49879.2, complete sequence	14107-14136	7	0.767
NZ_CP040694_1	1.7\|245070\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245070-245099	30	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	424232-424261	7	0.767
NZ_CP040694_1	1.7\|245070\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245070-245099	30	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	220909-220938	7	0.767
NZ_CP040694_1	1.7\|245070\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245070-245099	30	NC_018689	Bacillus thuringiensis MC28 plasmid pMC429, complete sequence	361279-361308	7	0.767
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	AP014344	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S38-C30, * SEQUENCING IN PROGRESS *	28424-28453	7	0.767
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	NZ_CP040842	Leptospira weilii strain CUDO6 plasmid pDO6, complete sequence	89193-89222	7	0.767
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	NZ_CP024873	Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence	31633-31662	7	0.767
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	85309-85338	7	0.767
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	LC081338	Vibrio sp. 04Ya108 plasmid pSEA1 DNA, complete genome	233491-233520	7	0.767
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	NC_016983	Photobacterium damselae subsp. damselae plasmid pAQU1, complete sequence	145232-145261	7	0.767
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	NZ_CP040845	Leptospira weilii strain CUD13 plasmid pD13, complete sequence	95444-95473	7	0.767
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	MN693005	Marine virus AFVG_117M50, complete genome	43598-43627	7	0.767
NZ_CP040694_1	1.10\|245298\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245298-245327	30	MT774405	CrAssphage cr115_1, complete genome	98911-98940	7	0.767
NZ_CP040694_1	1.10\|245298\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245298-245327	30	MT774396	CrAssphage cr53_1, complete genome	38288-38317	7	0.767
NZ_CP040694_1	1.12\|245450\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245450-245479	30	MT410774	Psychrobacillus phage Spoks, complete genome	17529-17558	7	0.767
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	AP013754	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C20-MedDCM-OCT-S24-C67, * SEQUENCING IN PROGRESS *	5475-5504	7	0.767
NZ_CP040694_1	1.15\|245678\|29\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245678-245706	29	AP013432	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-U-MedDCM-OCT-S25-C65	18603-18631	7	0.759
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	83296-83325	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP019993	Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence	76636-76665	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP033207	Enterococcus faecium strain RBWH1 plasmid pRBWH1.1, complete sequence	141457-141486	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP018129	Enterococcus faecium strain A_020709_82 plasmid unnamed1, complete sequence	108068-108097	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	LT603679	Enterococcus faecium isolate Ef_DMG1500501 genome assembly, plasmid: 2	181692-181721	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP041262	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence	156537-156566	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP027498	Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence	145943-145972	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135333	Enterococcus faecium isolate E7471 plasmid 3	90377-90406	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135244	Enterococcus faecium isolate E6988 plasmid 2	126590-126619	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135294	Enterococcus faecium isolate E7237 plasmid 2	169003-169032	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135255	Enterococcus faecium isolate E7098 plasmid 2	106343-106372	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP019209	Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence	31948-31977	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP019989	Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence	160685-160714	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135227	Enterococcus faecium isolate E7025 plasmid 2	109196-109225	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135489	Enterococcus faecium isolate E8414 plasmid 2	130344-130373	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135415	Enterococcus faecium isolate E8328 plasmid 2	139233-139262	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135395	Enterococcus faecium isolate E8290 plasmid 2	139233-139262	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135325	Enterococcus faecium isolate E7654 plasmid 2	123980-124009	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135358	Enterococcus faecium isolate E7948 plasmid 2	254127-254156	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135409	Enterococcus faecium isolate E8284 plasmid 2	139233-139262	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135385	Enterococcus faecium isolate E7933 plasmid 2	137751-137780	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP044265	Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence	155806-155835	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_LR135318	Enterococcus faecium isolate E7663 plasmid 2	123951-123980	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP014530	Enterococcus faecium strain E745 plasmid pl1, complete sequence	109743-109772	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP023424	Enterococcus faecium strain K60-39 plasmid pTT39_p1, complete sequence	156825-156854	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NC_017963	Enterococcus faecium DO plasmid 3, complete sequence	157383-157412	7	0.767
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP041271	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence	156546-156575	7	0.767
NZ_CP040694_1	1.27\|246590\|30\|NZ_CP040694\|CRISPRCasFinder	246590-246619	30	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	10592-10621	7	0.767
NZ_CP040694_1	1.27\|246590\|30\|NZ_CP040694\|CRISPRCasFinder	246590-246619	30	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	46738-46767	7	0.767
NZ_CP040694_1	1.3\|244766\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	244766-244795	30	MG592485	Vibrio phage 1.111.B._10N.286.45.E6, partial genome	9160-9189	8	0.733
NZ_CP040694_1	1.3\|244766\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	244766-244795	30	MG592484	Vibrio phage 1.111.A._10N.286.45.E6, partial genome	9169-9198	8	0.733
NZ_CP040694_1	1.3\|244766\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	244766-244795	30	NZ_CP012988	Klebsiella pneumoniae strain KpN01 plasmid pKpN01-CTX, complete sequence	150332-150361	8	0.733
NZ_CP040694_1	1.3\|244766\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	244766-244795	30	NZ_CP043384	Enterobacter hormaechei subsp. xiangfangensis strain WCHEX045001 plasmid p1_045001, complete sequence	62829-62858	8	0.733
NZ_CP040694_1	1.3\|244766\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	244766-244795	30	NZ_CP012993	Klebsiella pneumoniae strain KpN06 plasmid pKpN06-CTX, complete sequence	150332-150361	8	0.733
NZ_CP040694_1	1.8\|245146\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245146-245175	30	NZ_AP018282	Chondrocystis sp. NIES-4102 plasmid plasmid1 DNA, complete genome	52609-52638	8	0.733
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	MK295204	Shigella phage vB_SdyM_006, complete genome	146015-146044	8	0.733
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	MG696114	Proteus phage phiP4-3, complete genome	18440-18469	8	0.733
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	NZ_CP017573	Bacillus thuringiensis strain SCG04-02 plasmid PSCG61, complete sequence	46127-46156	8	0.733
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	MN693026	Marine virus AFVG_117M72, complete genome	53958-53987	8	0.733
NZ_CP040694_1	1.12\|245450\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245450-245479	30	NZ_CP012100	Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence	96358-96387	8	0.733
NZ_CP040694_1	1.12\|245450\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245450-245479	30	MT773554	Myoviridae sp. isolate BML_2 genomic sequence	211328-211357	8	0.733
NZ_CP040694_1	1.12\|245450\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245450-245479	30	MH616672	Microviridae sp. isolate ctcj37, complete genome	2460-2489	8	0.733
NZ_CP040694_1	1.15\|245678\|29\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245678-245706	29	MK490927	Phage Altai3, complete genome	10440-10468	8	0.724
NZ_CP040694_1	1.16\|245753\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245753-245782	30	MK415409	Phage YS1-2_2434, complete genome	26006-26035	8	0.733
NZ_CP040694_1	1.17\|245829\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245829-245858	30	JN638751	Bacillus phage G, complete genome	395398-395427	8	0.733
NZ_CP040694_1	1.20\|246057\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246057-246086	30	NZ_CP034999	Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence	613878-613907	8	0.733
NZ_CP040694_1	1.20\|246057\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246057-246086	30	NC_004041	Rhizobium etli CFN 42 plasmid p42d, complete sequence	224203-224232	8	0.733
NZ_CP040694_1	1.20\|246057\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246057-246086	30	NZ_CP021027	Rhizobium sp. TAL182 plasmid pRetTAL182c, complete sequence	295483-295512	8	0.733
NZ_CP040694_1	1.20\|246057\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246057-246086	30	NZ_CP013633	Rhizobium sp. N324 plasmid pRspN324c, complete sequence	299003-299032	8	0.733
NZ_CP040694_1	1.20\|246057\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246057-246086	30	NZ_CP020950	Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence	328127-328156	8	0.733
NZ_CP040694_1	1.20\|246057\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246057-246086	30	NZ_CP017243	Rhizobium etli 8C-3 plasmid pRsp8C3b, complete sequence	295297-295326	8	0.733
NZ_CP040694_1	1.27\|246590\|30\|NZ_CP040694\|CRISPRCasFinder	246590-246619	30	MN694159	Marine virus AFVG_250M1044, complete genome	6544-6573	8	0.733
NZ_CP040694_1	1.27\|246590\|30\|NZ_CP040694\|CRISPRCasFinder	246590-246619	30	NZ_CP044515	Leptospira interrogans serovar Canicola strain 611 plasmid p1, complete sequence	71209-71238	8	0.733
NZ_CP040694_1	1.27\|246590\|30\|NZ_CP040694\|CRISPRCasFinder	246590-246619	30	NC_025136	Leptospira interrogans serovar Canicola strain Gui44 plasmid pGui1, complete sequence	70262-70291	8	0.733
NZ_CP040694_1	1.27\|246590\|30\|NZ_CP040694\|CRISPRCasFinder	246590-246619	30	NZ_CP044511	Leptospira interrogans serovar Canicola strain LJ178 plasmid p1, complete sequence	71136-71165	8	0.733
NZ_CP040694_1	1.28\|246666\|30\|NZ_CP040694\|CRISPRCasFinder	246666-246695	30	MN693260	Marine virus AFVG_25M320, complete genome	5167-5196	8	0.733
NZ_CP040694_1	1.28\|246666\|30\|NZ_CP040694\|CRISPRCasFinder	246666-246695	30	MN693027	Marine virus AFVG_117M71, complete genome	7613-7642	8	0.733
NZ_CP040694_1	1.28\|246666\|30\|NZ_CP040694\|CRISPRCasFinder	246666-246695	30	MN693700	Marine virus AFVG_250M620, complete genome	7623-7652	8	0.733
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	95614-95643	9	0.7
NZ_CP040694_1	1.9\|245222\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245222-245251	30	MT909815	Enterococcus phage iF6, complete genome	152674-152703	9	0.7
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	MG592576	Vibrio phage 1.206.O._10N.222.51.B10, partial genome	33268-33297	9	0.7
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	MG592502	Vibrio phage 1.131.O._10N.222.49.A8, partial genome	32937-32966	9	0.7
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	MG592597	Vibrio phage 1.233.A._10N.261.51.E6, partial genome	33112-33141	9	0.7
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	MG592535	Vibrio phage 1.168.O._10N.261.52.A10, partial genome	33936-33965	9	0.7
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	MG592593	Vibrio phage 1.226.O._10N.261.48.E5, partial genome	32515-32544	9	0.7
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	MG592605	Vibrio phage 1.239.O._10N.261.52.F6, partial genome	35969-35998	9	0.7
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	MG592442	Vibrio phage 1.064.O._10N.261.52.E2, partial genome	32012-32041	9	0.7
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	MG592534	Vibrio phage 1.167.O._10N.261.51.F2, partial genome	32358-32387	9	0.7
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	MG592482	Vibrio phage 1.108.O._10N.222.51.A4, partial genome	31620-31649	9	0.7
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	MG592503	Vibrio phage 1.132.O._10N.222.49.F8, partial genome	32354-32383	9	0.7
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	MG592631	Vibrio phage 1.266.O._10N.286.52.F9, partial genome	31408-31437	9	0.7
NZ_CP040694_1	1.14\|245602\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	245602-245631	30	MG592598	Vibrio phage 1.233.B._10N.261.51.E6, partial genome	33113-33142	9	0.7
NZ_CP040694_1	1.23\|246285\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246285-246314	30	NC_014502	Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence	226624-226653	9	0.7
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP037749	Campylobacter helveticus strain 2013D-9613 plasmid unnamed1	44113-44142	9	0.7
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NZ_CP020479	Campylobacter helveticus strain ATCC 51209 plasmid pHELV-1, complete sequence	22887-22916	9	0.7
NZ_CP040694_1	1.2\|244690\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	244690-244719	30	MN694051	Marine virus AFVG_250M33, complete genome	18857-18886	10	0.667
NZ_CP040694_1	1.20\|246057\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246057-246086	30	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	2115517-2115546	10	0.667
NZ_CP040694_1	1.23\|246285\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246285-246314	30	NC_014502	Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence	76433-76462	10	0.667
NZ_CP040694_1	1.24\|246361\|30\|NZ_CP040694\|PILER-CR,CRISPRCasFinder	246361-246390	30	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1113014-1113043	10	0.667

1. spacer 1.21|246133|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to AP013358 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G1, isolate: uvMED-CGR-U-MedDCM-OCT-S27-C45) position: , mismatch: 3, identity: 0.9

ctcttatatcataatgtataaaagatttat	CRISPR spacer
ctcttatatcataatgtacaaaagaattgt	Protospacer
******************.****** **.*

2. spacer 1.12|245450|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MT774409 (CrAssphage cr131_1, complete genome) position: , mismatch: 4, identity: 0.867

-tcattattagttgtaaagataaagaagaaa	CRISPR spacer
ttcattg-tacttgtaaagatacagaagaaa	Protospacer
 *****. ** *********** ********

3. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to CP033552 (Acinetobacter nosocomialis strain 2014S01-097 plasmid p2014S01-097-2, complete sequence) position: , mismatch: 5, identity: 0.833

gtgattttaaagttttcattttg---taaaatt	CRISPR spacer
atgattttaaatttttcattttgctctaaa---	Protospacer
.********** ***********   ****

4. spacer 1.10|245298|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MN693654 (Marine virus AFVG_250M1181, complete genome) position: , mismatch: 5, identity: 0.833

ttttatcctttactttctttcttattacct-	CRISPR spacer
ctttatcctttattttctttc-tattatata	Protospacer
.***********.******** *****. *

5. spacer 1.12|245450|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP034818 (Paracoccus sp. Arc7-R13 plasmid unnamed8, complete sequence) position: , mismatch: 5, identity: 0.833

tcattattagttgtaaagataaagaagaaa	CRISPR spacer
taattattggttgtaaagataaagagaaca	Protospacer
* ******.****************..* *

6. spacer 1.21|246133|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to AP013515 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-U-MedDCM-OCT-S27-C25) position: , mismatch: 5, identity: 0.833

ctcttatatcataatgtataaaagatttat	CRISPR spacer
ctcttatatcataatgaacaaaagtatcat	Protospacer
**************** *.*****  *.**

7. spacer 1.27|246590|30|NZ_CP040694|CRISPRCasFinder matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 5, identity: 0.833

ccttttacttcccttcctaattcatctttg	CRISPR spacer
tcttttacttcccttactgattcatcttcc	Protospacer
.************** **.*********.

8. spacer 1.6|244994|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NC_014841 (Pantoea sp. At-9b plasmid pPAT9B04, complete sequence) position: , mismatch: 6, identity: 0.8

tgtcttaaagtggcttttttcggtctttca	CRISPR spacer
aattttaaagtggattttttcggtatttta	Protospacer
 .*.********* ********** ***.*

9. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MN693375 (Marine virus AFVG_25M113, complete genome) position: , mismatch: 6, identity: 0.8

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
atgattttaaaattttcattttgtttatta	Protospacer
.**********.************  * *

10. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP024249 (Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
gatactttaaagttttcattgtgtaaatat	Protospacer
*  *.*************** ******  *

11. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to AP014272 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S46-C191, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
atgattgtaaagttttctttttgtgatctt	Protospacer
.***** ********** ******.*  **

12. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MN693547 (Marine virus AFVG_25M424, complete genome) position: , mismatch: 6, identity: 0.8

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
atgattgtaaagttttctttttgtgatctt	Protospacer
.***** ********** ******.*  **

13. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MN693598 (Marine virus AFVG_25M403, complete genome) position: , mismatch: 6, identity: 0.8

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
atgattgtaaagttttctttttgtgatctt	Protospacer
.***** ********** ******.*  **

14. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MN693297 (Marine virus AFVG_25M423, complete genome) position: , mismatch: 6, identity: 0.8

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
atgattgtaaagttttctttttgtgatctt	Protospacer
.***** ********** ******.*  **

15. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MN693353 (Marine virus AFVG_25M425, complete genome) position: , mismatch: 6, identity: 0.8

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
atgattgtaaagttttctttttgtgatctt	Protospacer
.***** ********** ******.*  **

16. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MN693440 (Marine virus AFVG_25M540, complete genome) position: , mismatch: 6, identity: 0.8

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
atgattgtaaagttttctttttgtgatctt	Protospacer
.***** ********** ******.*  **

17. spacer 1.10|245298|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MN694724 (Marine virus AFVG_250M441, complete genome) position: , mismatch: 6, identity: 0.8

ttttatcctttactttctttcttattacct-	CRISPR spacer
cttgatcctttactttctttc-tattgtata	Protospacer
.** ***************** ****.. *

18. spacer 1.10|245298|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 6, identity: 0.8

ttttatcctttactttctttcttattacct	CRISPR spacer
ttttatcctgtactttctttcctttaatat	Protospacer
********* ***********.* * *. *

19. spacer 1.10|245298|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 6, identity: 0.8

ttttatcctttactttctttcttattacct	CRISPR spacer
ttttatcctgtactttctttcctttaatat	Protospacer
********* ***********.* * *. *

20. spacer 1.21|246133|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MN855959 (Siphoviridae sp. isolate 167, complete genome) position: , mismatch: 6, identity: 0.8

ctcttat-atcataatgtataaaagatttat	CRISPR spacer
-taacataatcataattcataaaagatttat	Protospacer
 *  .** ******** .*************

21. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NC_018278 (Burkholderia phage KL1, complete genome) position: , mismatch: 6, identity: 0.8

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
cgatgccgatttcttccaaagcttcgataa	Protospacer
*  *. *********.****** *******

22. spacer 1.27|246590|30|NZ_CP040694|CRISPRCasFinder matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 6, identity: 0.8

ccttttacttcccttcctaattcatctttg	CRISPR spacer
gctcctacttcccatcctaatttatctttt	Protospacer
 **..******** ********.******

23. spacer 1.3|244766|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NC_006909 (Leptospirillum ferrooxidans ATCC 49879 plasmid p49879.2, complete sequence) position: , mismatch: 7, identity: 0.767

aatggtcttgtttctacatttcttgaaagc	CRISPR spacer
gctctttttatttctgcatttcttgaaagc	Protospacer
. *  *.**.*****.**************

24. spacer 1.7|245070|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 7, identity: 0.767

atcttc----cggagttgacaaaaagtcaagaag	CRISPR spacer
----tcaagacggaggtgacaaaaagtcatgaaa	Protospacer
    **    ***** ************* ***.

25. spacer 1.7|245070|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 7, identity: 0.767

atcttc----cggagttgacaaaaagtcaagaag	CRISPR spacer
----tcaagacggaggtgacaaaaagtcatgaaa	Protospacer
    **    ***** ************* ***.

26. spacer 1.7|245070|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 7, identity: 0.767

atcttc----cggagttgacaaaaagtcaagaag	CRISPR spacer
----tcaagacggaggtgacaaaaagtcatgaaa	Protospacer
    **    ***** ************* ***.

27. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to AP014344 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S38-C30, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
acttttttaaagttttcattttgtaacgct	Protospacer
..  ********************** ..*

28. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP040842 (Leptospira weilii strain CUDO6 plasmid pDO6, complete sequence) position: , mismatch: 7, identity: 0.767

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
ttttttttaaagtattaattttgtaaagtg	Protospacer
 *  ********* ** **********.*

29. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP024873 (Leptospira mayottensis 200901116 plasmid p1_L200901116, complete sequence) position: , mismatch: 7, identity: 0.767

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
ttttttttaaagtattaattttgtaaagtg	Protospacer
 *  ********* ** **********.*

30. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 7, identity: 0.767

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
ataagattaacattttcattttgtaaaatg	Protospacer
.*.*  **** .*****************

31. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to LC081338 (Vibrio sp. 04Ya108 plasmid pSEA1 DNA, complete genome) position: , mismatch: 7, identity: 0.767

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
ataagattaacattttcattttgtaaaatg	Protospacer
.*.*  **** .*****************

32. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NC_016983 (Photobacterium damselae subsp. damselae plasmid pAQU1, complete sequence) position: , mismatch: 7, identity: 0.767

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
ataagattaacattttcattttgtaaaatg	Protospacer
.*.*  **** .*****************

33. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP040845 (Leptospira weilii strain CUD13 plasmid pD13, complete sequence) position: , mismatch: 7, identity: 0.767

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
ttttttttaaagtattaattttgtaaagtg	Protospacer
 *  ********* ** **********.*

34. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MN693005 (Marine virus AFVG_117M50, complete genome) position: , mismatch: 7, identity: 0.767

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
atcattttaaagttttctttttgttcatta	Protospacer
.* ************** ******  * *

35. spacer 1.10|245298|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MT774405 (CrAssphage cr115_1, complete genome) position: , mismatch: 7, identity: 0.767

ttttatcctttactttctttcttattacct	CRISPR spacer
tctaatcctttatcttctttcttattatgc	Protospacer
*.* ********..*************. .

36. spacer 1.10|245298|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MT774396 (CrAssphage cr53_1, complete genome) position: , mismatch: 7, identity: 0.767

ttttatcctttactttctttcttattacct	CRISPR spacer
tctaatcctttatcttctttcttattatgc	Protospacer
*.* ********..*************. .

37. spacer 1.12|245450|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MT410774 (Psychrobacillus phage Spoks, complete genome) position: , mismatch: 7, identity: 0.767

tcattattagttgtaaagataaagaagaaa	CRISPR spacer
attttattatttttaaagataaagaagtga	Protospacer
 . ****** ** ************** .*

38. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to AP013754 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C20-MedDCM-OCT-S24-C67, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
ctcaagacgctttaggattagcgatgatgc	Protospacer
*****.*.***************  .*..*

39. spacer 1.15|245678|29|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to AP013432 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-U-MedDCM-OCT-S25-C65) position: , mismatch: 7, identity: 0.759

aggaaaactcttctagcttgaaattttct	CRISPR spacer
tcgtaaattcttctagcttgaaatgtttg	Protospacer
  * ***.**************** **.

40. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP046076 (Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

41. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP019993 (Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

42. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP033207 (Enterococcus faecium strain RBWH1 plasmid pRBWH1.1, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

43. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP018129 (Enterococcus faecium strain A_020709_82 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

44. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to LT603679 (Enterococcus faecium isolate Ef_DMG1500501 genome assembly, plasmid: 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

45. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP041262 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

46. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP027498 (Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

47. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135333 (Enterococcus faecium isolate E7471 plasmid 3) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

48. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135244 (Enterococcus faecium isolate E6988 plasmid 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

49. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135294 (Enterococcus faecium isolate E7237 plasmid 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

50. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135255 (Enterococcus faecium isolate E7098 plasmid 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

51. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP019209 (Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

52. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP019989 (Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

53. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135227 (Enterococcus faecium isolate E7025 plasmid 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

54. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135489 (Enterococcus faecium isolate E8414 plasmid 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

55. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135415 (Enterococcus faecium isolate E8328 plasmid 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

56. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135395 (Enterococcus faecium isolate E8290 plasmid 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

57. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135325 (Enterococcus faecium isolate E7654 plasmid 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

58. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135358 (Enterococcus faecium isolate E7948 plasmid 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

59. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135409 (Enterococcus faecium isolate E8284 plasmid 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

60. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135385 (Enterococcus faecium isolate E7933 plasmid 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

61. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP044265 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

62. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR135318 (Enterococcus faecium isolate E7663 plasmid 2) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

63. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP014530 (Enterococcus faecium strain E745 plasmid pl1, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

64. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP023424 (Enterococcus faecium strain K60-39 plasmid pTT39_p1, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

65. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NC_017963 (Enterococcus faecium DO plasmid 3, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

66. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP041271 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence) position: , mismatch: 7, identity: 0.767

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gcatagcgatttctttcaaatcaccgactt	Protospacer
 * ***************** **.***.

67. spacer 1.27|246590|30|NZ_CP040694|CRISPRCasFinder matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 7, identity: 0.767

ccttttacttcccttcctaattcatctttg	CRISPR spacer
ctaataacttctcttcctaatttatctttt	Protospacer
*.  * *****.**********.******

68. spacer 1.27|246590|30|NZ_CP040694|CRISPRCasFinder matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 7, identity: 0.767

ccttttacttcccttcctaattcatctttg	CRISPR spacer
ctaataacttctcttcctaatttatctttt	Protospacer
*.  * *****.**********.******

69. spacer 1.3|244766|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592485 (Vibrio phage 1.111.B._10N.286.45.E6, partial genome) position: , mismatch: 8, identity: 0.733

aatggtcttgtttctacatttcttgaaagc	CRISPR spacer
cgtaatcttgtttctgcattgcttgaaacg	Protospacer
 .*..**********.**** *******

70. spacer 1.3|244766|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592484 (Vibrio phage 1.111.A._10N.286.45.E6, partial genome) position: , mismatch: 8, identity: 0.733

aatggtcttgtttctacatttcttgaaagc	CRISPR spacer
cgtaatcttgtttctgcattgcttgaaacg	Protospacer
 .*..**********.**** *******

71. spacer 1.3|244766|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP012988 (Klebsiella pneumoniae strain KpN01 plasmid pKpN01-CTX, complete sequence) position: , mismatch: 8, identity: 0.733

--aatggtcttgtttctacatttcttgaaagc	CRISPR spacer
ccaaca--ctggtttctacatttcttgaaccg	Protospacer
  **..  ** ******************

72. spacer 1.3|244766|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP043384 (Enterobacter hormaechei subsp. xiangfangensis strain WCHEX045001 plasmid p1_045001, complete sequence) position: , mismatch: 8, identity: 0.733

--aatggtcttgtttctacatttcttgaaagc	CRISPR spacer
ccaaca--ctggtttctacatttcttgaaccg	Protospacer
  **..  ** ******************

73. spacer 1.3|244766|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP012993 (Klebsiella pneumoniae strain KpN06 plasmid pKpN06-CTX, complete sequence) position: , mismatch: 8, identity: 0.733

--aatggtcttgtttctacatttcttgaaagc	CRISPR spacer
ccaaca--ctggtttctacatttcttgaaccg	Protospacer
  **..  ** ******************

74. spacer 1.8|245146|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_AP018282 (Chondrocystis sp. NIES-4102 plasmid plasmid1 DNA, complete genome) position: , mismatch: 8, identity: 0.733

gcaatagtgtgattgattatagtagccgtt	CRISPR spacer
tcgataatttgattgattatagtagcaaga	Protospacer
 *.***.* ***************** .

75. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MK295204 (Shigella phage vB_SdyM_006, complete genome) position: , mismatch: 8, identity: 0.733

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
gtgtttttaaagttttcatattgttctcac	Protospacer
*** *************** ****     .

76. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG696114 (Proteus phage phiP4-3, complete genome) position: , mismatch: 8, identity: 0.733

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
gtgtttttaaagttttcatattgttctcac	Protospacer
*** *************** ****     .

77. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP017573 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG61, complete sequence) position: , mismatch: 8, identity: 0.733

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
atatttttaaagtttttattttataaagaa	Protospacer
.*. ************.*****.****.

78. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MN693026 (Marine virus AFVG_117M72, complete genome) position: , mismatch: 8, identity: 0.733

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
aaagttttaaagatttcattttgtatagct	Protospacer
. ..******** ************ *..*

79. spacer 1.12|245450|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 8, identity: 0.733

tcattattagttgtaaagataaagaagaaa	CRISPR spacer
tatttattagttgtgaagatatagaaagtg	Protospacer
*  ***********.****** ****.. .

80. spacer 1.12|245450|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MT773554 (Myoviridae sp. isolate BML_2 genomic sequence) position: , mismatch: 8, identity: 0.733

tcattattagttgtaaagataaagaagaaa	CRISPR spacer
ttattattagatctaaagataaagattttc	Protospacer
*.******** * ************

81. spacer 1.12|245450|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MH616672 (Microviridae sp. isolate ctcj37, complete genome) position: , mismatch: 8, identity: 0.733

tcattattagttgtaaagataaagaagaaa	CRISPR spacer
agttgattagttggaaagataaagaaacag	Protospacer
   * ******** ************. *.

82. spacer 1.15|245678|29|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MK490927 (Phage Altai3, complete genome) position: , mismatch: 8, identity: 0.724

aggaaaactcttctagcttgaaattttct	CRISPR spacer
ccagtaactcttttagcttgaaattatcc	Protospacer
  .. *******.************ **.

83. spacer 1.16|245753|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MK415409 (Phage YS1-2_2434, complete genome) position: , mismatch: 8, identity: 0.733

tcgcaatgtaaagtggtgcgtctaattctt	CRISPR spacer
ccgcaaggtgaagtggtgcgtctatcggat	Protospacer
.***** **.************** .   *

84. spacer 1.17|245829|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 8, identity: 0.733

gaatttctccagttaaagcctttactgttt	CRISPR spacer
aaatttctccagttaaaagctttattacac	Protospacer
.****************. *****.*.. .

85. spacer 1.20|246057|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP034999 (Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence) position: , mismatch: 8, identity: 0.733

aaagaacatcgccaccaaaaaggacagctt	CRISPR spacer
caagaacatcgccaccaagaagggttcgtg	Protospacer
 *****************.****..   *

86. spacer 1.20|246057|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NC_004041 (Rhizobium etli CFN 42 plasmid p42d, complete sequence) position: , mismatch: 8, identity: 0.733

aaagaacatcgccaccaaaaaggacagctt	CRISPR spacer
caagaacatcgccaccaagaagggttcgtg	Protospacer
 *****************.****..   *

87. spacer 1.20|246057|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP021027 (Rhizobium sp. TAL182 plasmid pRetTAL182c, complete sequence) position: , mismatch: 8, identity: 0.733

aaagaacatcgccaccaaaaaggacagctt	CRISPR spacer
caagaacatcgccaccaagaagggttcgtg	Protospacer
 *****************.****..   *

88. spacer 1.20|246057|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP013633 (Rhizobium sp. N324 plasmid pRspN324c, complete sequence) position: , mismatch: 8, identity: 0.733

aaagaacatcgccaccaaaaaggacagctt	CRISPR spacer
caagaacatcgccaccaagaagggttcgtg	Protospacer
 *****************.****..   *

89. spacer 1.20|246057|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP020950 (Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence) position: , mismatch: 8, identity: 0.733

aaagaacatcgccaccaaaaaggacagctt	CRISPR spacer
caagaacatcgccaccaagaagggttcgtg	Protospacer
 *****************.****..   *

90. spacer 1.20|246057|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP017243 (Rhizobium etli 8C-3 plasmid pRsp8C3b, complete sequence) position: , mismatch: 8, identity: 0.733

aaagaacatcgccaccaaaaaggacagctt	CRISPR spacer
caagaacatcgccaccaagaagggttcgtg	Protospacer
 *****************.****..   *

91. spacer 1.27|246590|30|NZ_CP040694|CRISPRCasFinder matches to MN694159 (Marine virus AFVG_250M1044, complete genome) position: , mismatch: 8, identity: 0.733

ccttttacttcccttcctaattcatctttg	CRISPR spacer
tcttttacttcacttcctatttcaaatagt	Protospacer
.********** ******* ****  *

92. spacer 1.27|246590|30|NZ_CP040694|CRISPRCasFinder matches to NZ_CP044515 (Leptospira interrogans serovar Canicola strain 611 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

ccttttacttcccttcctaattcatctttg	CRISPR spacer
cggattacttcgcttcttaattcatctaca	Protospacer
*   ******* ****.********** ..

93. spacer 1.27|246590|30|NZ_CP040694|CRISPRCasFinder matches to NC_025136 (Leptospira interrogans serovar Canicola strain Gui44 plasmid pGui1, complete sequence) position: , mismatch: 8, identity: 0.733

ccttttacttcccttcctaattcatctttg	CRISPR spacer
cggattacttcgcttcttaattcatctaca	Protospacer
*   ******* ****.********** ..

94. spacer 1.27|246590|30|NZ_CP040694|CRISPRCasFinder matches to NZ_CP044511 (Leptospira interrogans serovar Canicola strain LJ178 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

ccttttacttcccttcctaattcatctttg	CRISPR spacer
cggattacttcgcttcttaattcatctaca	Protospacer
*   ******* ****.********** ..

95. spacer 1.28|246666|30|NZ_CP040694|CRISPRCasFinder matches to MN693260 (Marine virus AFVG_25M320, complete genome) position: , mismatch: 8, identity: 0.733

gaccagattaggagtctttttaggcttatg	CRISPR spacer
aggatgattaggagtccttttaggcttgtt	Protospacer
..   ***********.**********.*

96. spacer 1.28|246666|30|NZ_CP040694|CRISPRCasFinder matches to MN693027 (Marine virus AFVG_117M71, complete genome) position: , mismatch: 8, identity: 0.733

gaccagattaggagtctttttaggcttatg	CRISPR spacer
agggtgatttggagtcttcttaggcttatt	Protospacer
..   **** ********.**********

97. spacer 1.28|246666|30|NZ_CP040694|CRISPRCasFinder matches to MN693700 (Marine virus AFVG_250M620, complete genome) position: , mismatch: 8, identity: 0.733

gaccagattaggagtctttttaggcttatg	CRISPR spacer
agggtgatttggagtcttcttaggcttatt	Protospacer
..   **** ********.**********

98. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 9, identity: 0.7

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
tcctccttaaaggtttcattttgtaaacta	Protospacer
 .  ..****** ************** *

99. spacer 1.9|245222|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MT909815 (Enterococcus phage iF6, complete genome) position: , mismatch: 9, identity: 0.7

gtgattttaaagttttcattttgtaaaatt	CRISPR spacer
cttcttttaaagttttcattttttagttcc	Protospacer
 *  ****************** **.  ..

100. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592576 (Vibrio phage 1.206.O._10N.222.51.B10, partial genome) position: , mismatch: 9, identity: 0.7

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
atcaaagtgctttaggatttgcgcccttgt	Protospacer
 *****.************ ****   ...

101. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592502 (Vibrio phage 1.131.O._10N.222.49.A8, partial genome) position: , mismatch: 9, identity: 0.7

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
atcaaagtgctttaggatttgcgcccttgt	Protospacer
 *****.************ ****   ...

102. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592597 (Vibrio phage 1.233.A._10N.261.51.E6, partial genome) position: , mismatch: 9, identity: 0.7

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
atcaaagtgctttaggatttgcgcccttgt	Protospacer
 *****.************ ****   ...

103. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592535 (Vibrio phage 1.168.O._10N.261.52.A10, partial genome) position: , mismatch: 9, identity: 0.7

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
atcaaagtgctttaggatttgcgcccttgt	Protospacer
 *****.************ ****   ...

104. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592593 (Vibrio phage 1.226.O._10N.261.48.E5, partial genome) position: , mismatch: 9, identity: 0.7

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
atcaaagtgctttaggatttgcgcccttgt	Protospacer
 *****.************ ****   ...

105. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592605 (Vibrio phage 1.239.O._10N.261.52.F6, partial genome) position: , mismatch: 9, identity: 0.7

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
atcaaagtgctttaggatttgcgcccttgt	Protospacer
 *****.************ ****   ...

106. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592442 (Vibrio phage 1.064.O._10N.261.52.E2, partial genome) position: , mismatch: 9, identity: 0.7

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
atcaaagtgctttaggatttgcgcccttgt	Protospacer
 *****.************ ****   ...

107. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592534 (Vibrio phage 1.167.O._10N.261.51.F2, partial genome) position: , mismatch: 9, identity: 0.7

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
atcaaagtgctttaggatttgcgcccttgt	Protospacer
 *****.************ ****   ...

108. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592482 (Vibrio phage 1.108.O._10N.222.51.A4, partial genome) position: , mismatch: 9, identity: 0.7

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
atcaaagtgctttaggatttgcgcccttgt	Protospacer
 *****.************ ****   ...

109. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592503 (Vibrio phage 1.132.O._10N.222.49.F8, partial genome) position: , mismatch: 9, identity: 0.7

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
atcaaagtgctttaggatttgcgcccttgt	Protospacer
 *****.************ ****   ...

110. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592631 (Vibrio phage 1.266.O._10N.286.52.F9, partial genome) position: , mismatch: 9, identity: 0.7

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
atcaaagtgctttaggatttgcgcccttgt	Protospacer
 *****.************ ****   ...

111. spacer 1.14|245602|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MG592598 (Vibrio phage 1.233.B._10N.261.51.E6, partial genome) position: , mismatch: 9, identity: 0.7

ctcaaaatgctttaggattagcgcaaacac	CRISPR spacer
atcaaagtgctttaggatttgcgcccttgt	Protospacer
 *****.************ ****   ...

112. spacer 1.23|246285|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NC_014502 (Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence) position: , mismatch: 9, identity: 0.7

cagcacaattaattaacgatggcagaacca	CRISPR spacer
aggtttaattaattaacgatgtcagaaaat	Protospacer
 .*. .*************** *****

113. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP037749 (Campylobacter helveticus strain 2013D-9613 plasmid unnamed1) position: , mismatch: 9, identity: 0.7

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
ttttagcgatttctttaatagcatcagctt	Protospacer
..************** * ******...

114. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP020479 (Campylobacter helveticus strain ATCC 51209 plasmid pHELV-1, complete sequence) position: , mismatch: 9, identity: 0.7

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
ttttagcgatttctttaatagcatcagctt	Protospacer
..************** * ******...

115. spacer 1.2|244690|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to MN694051 (Marine virus AFVG_250M33, complete genome) position: , mismatch: 10, identity: 0.667

cagctgcatctactacagatgtctgcaaaa	CRISPR spacer
cagctacatctactacagatgctactggtg	Protospacer
*****.***************..  ... .

116. spacer 1.20|246057|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 10, identity: 0.667

aaagaacatcgccaccaaaaaggacagctt	CRISPR spacer
cgttgcgatcgccacgaaaaaggacagcgg	Protospacer
 .  .  ******** ************

117. spacer 1.23|246285|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NC_014502 (Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence) position: , mismatch: 10, identity: 0.667

cagcacaattaattaacgatggcagaacca	CRISPR spacer
agctttaattaattaacgatgtcagaaaat	Protospacer
 . . .*************** *****

118. spacer 1.24|246361|30|NZ_CP040694|PILER-CR,CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 10, identity: 0.667

ccttagcgatttctttcaaagcatcgataa	CRISPR spacer
gtaagtcgatgtctttcaaagcatcgagcg	Protospacer
 .  . **** ****************  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

667980 : 674349

Enterobacteria_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138981653.1\|667980_668628_+	HD domain-containing protein	A0A1D6Y7U0	Golden_Marseillevirus	2.3e-16	31.7
WP_138983332.1\|668763_669288_+	hypothetical protein	NA	NA	NA	NA
WP_138981654.1\|669292_669868_+	sugar transferase	NA	NA	NA	NA
WP_138981655.1\|669900_670341_+	adenylyltransferase/cytidyltransferase family protein	A0A218MN49	uncultured_virus	7.3e-38	52.4
WP_138981656.1\|670350_670896_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.8e-46	51.6
WP_138981657.1\|670905_671988_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	9.7e-84	46.6
WP_138981658.1\|672000_672861_+	glucose-1-phosphate thymidylyltransferase RfbA	H9NC64	Sphingomonas_phage	5.9e-100	63.2
WP_138981659.1\|672988_674092_+	P-loop NTPase	NA	NA	NA	NA
WP_138981660.1\|674103_674349_+	NifU family protein	A0A0K0KWE8	Prochlorococcus_phage	3.7e-07	35.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP040694

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection