CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP034943	Bacillus subtilis subsp. spizizenii ATCC 6633 chromosome, complete genome	2 crisprs	csa3,cas3,DEDDh,WYL,DinG	0	1	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP034943_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034943_1

908775-908887

Orphan

Consensus_repeat	Method
CAAGGTCAATTCGGCACTGAATTTGCTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034943_1

>merge|NZ_CP034943|1|908775-908887|CRISPRCasFinder
CAAGGTCAATTCGGCACTGAATTTGCTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAACAAGGTCAATTCGGCACTGAATTCGCTAG

>NZ_CP034943|1|1|908775-908887|CRISPRCasFinder
CAAGGTCAATTCGGCACTGAATTTGCTAG	CGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCTGCTGGCCAA
CAAGGTCAATTCGGCACTGAATTCGCTAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034943.1\|WP_003223274.1\|910151_911894_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP034943.1\|WP_003223251.1\|902677_905260_+\|YfhO-family-protein	unknown	unknown	gnl\|CDD\|226888
NZ_CP034943.1\|WP_003223288.1\|916331_917216_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379641
NZ_CP034943.1\|WP_003223262.1\|907878_908631_+\|enoyl-[acyl-carrier-protein]-reductase-FabL	unknown	unknown	gnl\|CDD\|236145
NZ_CP034943.1\|WP_003223257.1\|907572_907797_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034943.1\|WP_003223245.1\|899607_900126_+\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|214600
NZ_CP034943.1\|WP_003223278.1\|913249_914539_-\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|183493
NZ_CP034943.1\|WP_003223287.1\|915769_916123_-\|YgzB-family-protein	unknown	unknown	gnl\|CDD\|371346
NZ_CP034943.1\|WP_003223248.1\|900530_901391_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP034943.1\|WP_032727352.1\|900211_900544_+\|SdpI-family-protein	unknown	unknown	gnl\|CDD\|227945
NZ_CP034943.1\|WP_003223253.1\|905256_906240_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP034943.1\|WP_079996308.1\|909046_909391_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372951
NZ_CP034943.1\|WP_003223255.1\|906456_907566_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|130156
NZ_CP034943.1\|WP_003223272.1\|909534_910065_+\|DUF402-domain-containing-protein	unknown	unknown	gnl\|CDD\|184219
NZ_CP034943.1\|WP_003223285.1\|915297_915735_+\|peroxide-responsive-transcriptional-repressor-PerR	unknown	unknown	gnl\|CDD\|223806
NZ_CP034943.1\|WP_003224004.1\|924175_924952_-\|sporulation-control-protein-Spo0M	unknown	unknown	gnl\|CDD\|226776
NZ_CP034943.1\|WP_003223276.1\|911969_913031_-\|aromatic-acid-exporter-family-protein	unknown	unknown	gnl\|CDD\|226614
NZ_CP034943.1\|WP_003223243.1\|899194_899464_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379438
NZ_CP034943.1\|WP_003223250.1\|901615_902605_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030
NZ_CP034943.1\|WP_003223280.1\|914691_915165_+\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|224146

Protein	Function_ID	Function_description	E-value
NZ_CP034943.1\|WP_003223274.1\|910151_911894_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP034943.1\|WP_003223251.1\|902677_905260_+\|YfhO-family-protein	gnl\|CDD\|226888	COG4485, COG4485, Predicted membrane protein [Function unknown].	0
NZ_CP034943.1\|WP_003223288.1\|916331_917216_+\|hypothetical-protein	gnl\|CDD\|379641	pfam14540, NTF-like, Nucleotidyltransferase-like. Structural comparisons with Structure 1kny indicate that this N-terminal domain resembles a nucleotidyltransferase fold.	4.83758e-59
NZ_CP034943.1\|WP_003223262.1\|907878_908631_+\|enoyl-[acyl-carrier-protein]-reductase-FabL	gnl\|CDD\|236145	PRK08063, PRK08063, enoyl-[acyl-carrier-protein] reductase FabL.	2.59874e-172
NZ_CP034943.1\|WP_003224004.1\|924175_924952_-\|sporulation-control-protein-Spo0M	gnl\|CDD\|226776	COG4326, Spo0M, Sporulation control protein [General function prediction only].	3.44854e-151
NZ_CP034943.1\|WP_003223245.1\|899607_900126_+\|SH3-domain-containing-protein	gnl\|CDD\|214600	smart00287, SH3b, Bacterial SH3 domain homologues.	2.33198e-12
NZ_CP034943.1\|WP_003223278.1\|913249_914539_-\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|183493	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional.	0
NZ_CP034943.1\|WP_003223287.1\|915769_916123_-\|YgzB-family-protein	gnl\|CDD\|371346	pfam11023, DUF2614, Zinc-ribbon containing domain. This is a family of proteins conserved in the Bacillaceae family. Some members are annotated as being protein YgzB. The function is not known.	2.97021e-69
NZ_CP034943.1\|WP_003223248.1\|900530_901391_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.95563e-36
NZ_CP034943.1\|WP_032727352.1\|900211_900544_+\|SdpI-family-protein	gnl\|CDD\|227945	COG5658, COG5658, Predicted integral membrane protein [Function unknown].	1.83445e-22
NZ_CP034943.1\|WP_003223253.1\|905256_906240_-\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	3.54944e-44
NZ_CP034943.1\|WP_079996308.1\|909046_909391_+\|hypothetical-protein	gnl\|CDD\|372951	pfam14182, YgaB, YgaB-like protein. The YgaB-like protein family includes the B. subtilis YgaB protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length.	3.29093e-29
NZ_CP034943.1\|WP_003223255.1\|906456_907566_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|130156	TIGR01084, A/G-specific_adenine_glycosylase, A/G-specific adenine glycosylase. This equivalog model identifies mutY members of the pfam00730 superfamily (HhH-GPD: Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate). The major members of the superfamily are nth and mutY. [DNA metabolism, DNA replication, recombination, and repair].	1.65133e-153
NZ_CP034943.1\|WP_003223272.1\|909534_910065_+\|DUF402-domain-containing-protein	gnl\|CDD\|184219	PRK13662, PRK13662, hypothetical protein; Provisional.	7.36814e-127
NZ_CP034943.1\|WP_003223285.1\|915297_915735_+\|peroxide-responsive-transcriptional-repressor-PerR	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	2.19115e-56
NZ_CP034943.1\|WP_003223276.1\|911969_913031_-\|aromatic-acid-exporter-family-protein	gnl\|CDD\|226614	COG4129, COG4129, Predicted membrane protein [Function unknown].	6.50305e-90
NZ_CP034943.1\|WP_003223243.1\|899194_899464_+\|hypothetical-protein	gnl\|CDD\|379438	pfam14043, WVELL, WVELL protein. This family includes the B. subtilis YfjH protein, which is functionally uncharacterized. This is not a homolog of E. coli YfjH, a synonym for IscX, which belongs to pfam04384. This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length and contain a highly conserved WVELL motif.	1.25823e-41
NZ_CP034943.1\|WP_003223250.1\|901615_902605_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	9.15135e-85
NZ_CP034943.1\|WP_003223280.1\|914691_915165_+\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	3.41084e-86

>NZ_CP034943.1|WP_003223262.1|907878_908631_+|enoyl-[acyl-carrier-protein]-reductase-FabL
MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLLV
>NZ_CP034943.1|WP_003223257.1|907572_907797_-|hypothetical-protein
MYVGRDMSELNMVSKEDWKNSELAYFHHAFQQIMPYLNEEGQSKYRELTQEIEARGGMKRNEADYSHGTRVSYD
>NZ_CP034943.1|WP_003223255.1|906456_907566_+|A/G-specific-adenine-glycosylase
MNVLEDKLKQKDIQRFRDDLISWFEREQRVLPWREDQDPYKVWVSEVMLQQTRVETVIPYFLRFVEQFPTVEALADADEEKVLKAWEGLGYYSRVRNLQSAVKEVKQEYGGIVPPDEKDFGSLKGVGPYTKGAVLSIAYNKPIPAVDGNVMRVMSRILSIWDDIAKPKTRTIFEDAVRAFISKEKPSEFNQGLMELGALICTPKSPSCLLCPVQKHCSAFEEGTERELPVKSKKKKPGIKTMAAIVLTDEDGRVFIHKRPSKGLLANLWEFPNLETQKGIKTEREQLTAFLENECGIQADISDLQGVVEHVFTHLVWNISVFFGKVKQVSDTSELKKVTKEELEQFAFPVSHQKIWKMAVEAAAYSAAP
>NZ_CP034943.1|WP_003223253.1|905256_906240_-|metal-dependent-hydrolase
MDTGTHVVMGIALGGIATLDPVVGSDPAMAHAVMIATLAGSQAPDIDTVLKLKNNAVYIRNHRGFTHSIPAVLFWSIIIPAILYLFYPQADFLHLWLWTLLAVVLHVFVDIFNAYGTQAIRPFSKKWVALGLINTFDPFIFISHLAAIAIWYAGGSPGITFLSLYIILAGYYLVRLIMQLRIKRKLHEMIHDEIESIIISPTMKFRQWRIAVTTAHAFYVGRSMEGHVVILDTFNRVPVPETEVMHAAKQDDNIAAFLSFSPVYRWEVDTFKDHYEVRFIDLRYRSKGHYPFVAIVHIGHDLTIRSSYTGWIFSEEKLQKKLKLGSI
>NZ_CP034943.1|WP_003223251.1|902677_905260_+|YfhO-family-protein
MKRKYVMIYAASLLVSVLAHAFFVKEWADGRYMTGPGDGLAQMIVFKKLLYDQYTHGNFFYNYSFGLGGGTFSQLGYYFSASFLFLAVSAAVWLLQAVQLIGEADTLFWAESAVFISIFKLSLIMFTAAAVFHYLLKHRAASFTGAVLYGASIIYFRHEAYWEFFTDTMIWLPLLVLGAEKIIRERRPAWFIIACSLTLINNFYFAYINLIFIGIYVLFRWLIRLEKHEEKRWIQCRTFLVSGLISFGISAVVFVPVVYGYLNNLRPPYSQKIEWLNFDDNILFSSRIIIVPAAFLLFLFLVSFYKNRVFRLFAGLSLLFILFHFSPYAASVFNGFSAPQNRFEYVLAFTIAGAAAAGLSQLSELKWKELLPAIAVVLLLYLYHIQRYKLDIWKPANESILLLLLLTIAALFAAAFAKKRAKVAVYGVIILSSLFVANTYQKYALSEGGGLDSVTKAYLTGEEYKGQESSELIRRLQKEDDDSLMRIDWMNGVRNNTPIIYGFNGFSAYSSILNKHLLTFYWNDLSIDMGRESVSRYASLGDRANLYSLLYGKYYMTEKTNEASVPYGFKKHLESEHYAVYENQYMLPFIKTADAIYSESELDKLPALAKEQAMLKGIVLENPSGKTEQTPKLANLIPKSDTTAKHAQYQNGLLTVTGENGGELIITPKQASSSPGDYYVSFYLKSKAKDKGFTLRVNDYVTTRKSNQSIYKTGVNDITVRVPKSDHISIKLPKGTYELKNIALYEENYQTLKSAVLQNKTDKEDNLKRDKNKLTFAYRLPKNQYIMLPIPYEKGWELKINGKTQTIEKADYAFIAFKAQKGDNHIELAYYPPYFKISALISLVSLLLAVLYIRRKKARL
>NZ_CP034943.1|WP_003223250.1|901615_902605_+|glycosyltransferase-family-2-protein
MKQGLISIIIPSYNEGYNVKLIHESLKKEFKTIHYDYEIFFINDGSVDDTLQQIKDLAAGCSRVKYISFSRNFGKEAAILAGFEHVQGEAVIVMDADLQHPTYLLKEFIKGYEEGYDQVIAQRNRKGDSPVRSLLSSLYYKFINKAVEVDLRDGVGDFRLLSRQAVNALLKLSEGNRFSKGLFCWIGFDQKIVFYENVERKNGTSKWSFSSLFNYGMDGVVSFNHKPLRICFYTGIFILLLSIIYIIATFVKILTNGISVPGYFTIISAVLFLGGVQLLSLGIIGEYIGRIYYETKKRPHYLIKEANIPNKDLPETNELKSMRRLTKMH
>NZ_CP034943.1|WP_003223248.1|900530_901391_+|alpha/beta-hydrolase
MDGVKCHFVKTNGITLHVAAAGPENGQLIVLLHGFPEFWYGWKNQIKPLADAGYRVIAPDQRGYNLSDKPDGIDSYRIDTLRDDIIGLISQFTDEKAIVIGHDWGGAVAWHLASTRPEYLEKLIAINIPHPYIMKTVTPIYPPQWLKSSYIAFFQLPDIPEASLKENDYETLDKAIGLSTRPELFTSEDVSKYKEAWKQPGALTAMLNWYRALRKGSLSEKTTYETAPYRMIWGMEDRFLSRKLAKETERHCTNGHLIFVDEASHWINHEKPAIVNHLILEYLKKQ
>NZ_CP034943.1|WP_032727352.1|900211_900544_+|SdpI-family-protein
MAGLVGGGLMIIAGILIKLFPPEFINSVYGYRTRRSMSDQRLWDEANRYSASLMILSGLVIAGIGLLLRSNLIILQLILLLAACVITFMLTEKRLKNMTYSQGGDISGRS
>NZ_CP034943.1|WP_003223245.1|899607_900126_+|SH3-domain-containing-protein
MKRKQVMLALTAAAGLSLTALYSAPAAKAAPLHDISVSMPSSDSYIIKAGKLNVRTEPNHKGKILGTISSEKKVTVNGFANADWAQIQYKGKKAYISTHFLMKTASQAKTAKQTAFYAPTPENGKAKQLSSGTEVTLLGWGFSENGGFDFTWAFVDYGGVKGYIQTKDLQIR
>NZ_CP034943.1|WP_003223243.1|899194_899464_+|hypothetical-protein
MDTYIEKLTNLLLEKNDMISYIQAKTWVELLWSDFEATYAKAGHAYQGEKMTEKIVTQWIENYGGQLHLFQSSRNDVNDYLNQSRGLLH
>NZ_CP034943.1|WP_079996308.1|909046_909391_+|hypothetical-protein
MSQRVCCIGIEMIKGGFVYIFNRLKEEPMTEFEKLVSEQMKTMDKLLDLQSELDRCKQIEAELRHLERDARLRGIQDEIAVKRKQLADIQDMFQKQTEQVIRSYRSSEKPSSFV
>NZ_CP034943.1|WP_003223272.1|909534_910065_+|DUF402-domain-containing-protein
MGYPKEGETIQIHSYKHNGLIHRIWNETTILKSTEMCVIGANDRTMVTESDGRTWITREPAICYFHARQWFNVIGMLREDGVHYYCNISSPFAYDGEAIKYIDYDLDVKVFPDMTYNILDEDEYDDHRKAMNYPKEIDSILRDYLNTLLHWIHQRQGPFAPEFVDMWYERYLRYTK
>NZ_CP034943.1|WP_003223274.1|910151_911894_+|ABC-transporter-ATP-binding-protein
MGVMKRYMQFVKPYKKQIFVTVLIGIVKFSIPLALPLLLKYVVDDIIQGGGTASDKTTSLFTIMAIMFALFLILRPPVEYYRQYFAQWTASKVLYDIRAKLFDHIQKLSLRFYANTRTGEVISRVINDVEQTKDFVITGLMNIWLDMLTILIVISIMLTLDIKLTLISIVLFPLYGISVKYFYGRLRKLTRERSQALAQVQGHLHERIQGMPVIRSFAIEDHEQANFNEKNSHFLDKAISHTNWNAKTFAVVNTITDLAPLIVIACAGYFVINGPLTVGTMVAFVGYIDRMYNPVRRLINSSTTLTQSIASMDRVFEFIDEPYELTDKPNAIKADQIRGEVEFQNVSFQYEKEKENILHDVSLKVNRGDTVALVGMSGGGKSTLVSLIPRFYDVTSGRLLIDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIMKAAKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVMENGTIIEIGTHDELMDYDSQYKHLFTIQNLS
>NZ_CP034943.1|WP_003223276.1|911969_913031_-|aromatic-acid-exporter-family-protein
MKLGARIFKTGIAITLALYLASWIGLPAPIFAGIAAIFAIQPSIYRSFLIIIDQVQANIIGAVIATVFGLIFGPSPIMIGLTAVIVITIMLKLKIEHTISIALVTVIAILESAGDDFLMFALIRTSTVILGVLSSFIVNLVFLPPKYETKLIHNTVENTEEIMKWIRLSMRQSTEHSILKEDIEKLKEKMIKLDQTYLLYKEERSYFKKTTYVKSRKLVLFRQAIITANRALDTLKKLHRLENEIYHMPEEFQETLTEELDYLLYWHELILMRFVGKIKPHDDADEEGIRYKRLLTKSFLKNQQNTDDELIDYNMLNIMASAVEYREQLEHLETLITSFQTYHPKDCEIETEE
>NZ_CP034943.1|WP_003223278.1|913249_914539_-|glutamate-1-semialdehyde-2,1-aminomutase
MHTKSIELHNEALEHIVGGVNSPSRSYKAVGGGSPVAMEKANGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITEAIKKAAENGVLYGTPTKHEVTFAKMLKEAIPAMDKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIANEVITVPFNDIESYKAALDKWGSEIAAVLVEPIVGNFGIVEPKEGFLEKVNELTHDAGALVIYDEVITAFRFMYGGAQDLLQVKPDLTALGKIIGGGLPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASILSGIACLEVLKEEGVYEKLDHLGAMLEEGILQHAETHGITITVNRLKGALTVYFSDEKVENYEQAERSDGETFATFFKLMLERGINLAPSKYEAWFITTAHTEQDIKDTLAAVEDAFKHLKK
>NZ_CP034943.1|WP_003223280.1|914691_915165_+|thioredoxin-dependent-thiol-peroxidase
MTIEIGQKAPDLELKGDHGETVTLSDYKGKYIVLYFYPKDMTPGCTTEACDFRDSHESFAELDAVIIGVSPDSQEKHGKFKEKHNLPFLLLVDDEHKLAEAFDVWKLKKNFGKEYMGIERSTFLIDKEGRLVKEWRKVKVKDHVAEALQTLKDMSEK
>NZ_CP034943.1|WP_003223285.1|915297_915735_+|peroxide-responsive-transcriptional-repressor-PerR
MAAHELKEALETLKETGVRITPQRHAILEYLVNSMAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGLVKELTYGDASSRFDFVTSDHYHAICENCGKIVDFHYPGLDEVEQLAAHVTGFKVSHHRLEIYGVCQECSKKENH
>NZ_CP034943.1|WP_003223287.1|915769_916123_-|YgzB-family-protein
MAKYSSKINKIRTFALSLVFVGFIIMYIGIFFKESVLLSSLFMILGLLSIGLSTVVYFWIGMLSTKAVRVICPACAKETKVLGRVDMCMHCREPLTLDKGLEGKEFDESYNKKKMSK
>NZ_CP034943.1|WP_003223288.1|916331_917216_+|hypothetical-protein
MDNLLRPIYQERASHPNTLAVIMIERRNKTSSLTDNFDAALLVIVKEADEPVFIKHYEFDQKTASLHVVTDSQIQEWILLGTNRRIIDWIVNGRVLFDRNEYIVELIDRLNTFPFAERKLKIGLEYGKLIRRYVEGKAFFEANQFLDAYNAVVHALHHLARIEVIDRGFHPETTVWSQVRQMEPQVYKLYSELIESHESLEKRLELLFLANDFLIHSKAEIGSAHLFEVMKEKGIWQFGELLQHPDLKHFTQDLGVMLDYLTDKGLINVCQIETKGQAIYHRGYSFKKDIDSDS
>NZ_CP034943.1|WP_003224004.1|924175_924952_-|sporulation-control-protein-Spo0M
MSFFKKLAASAGIGAAKVETILEKDAYYPGEEVRGTVHVKGGKIAQDIRYIDLQLNTRYVIVKDDEEHRKYATIHSFRVTGSFTIQPGEEHQFPFSFTLPLDTPITVGKVEVAVVTDLDIQGGIDKSDHDRIFVEAHPWIESVLEAFENLGFRLNEADCEQAPYFQRRLPFVQEFEFIPTSGYYRQMLDELELIFLLDEDGLDIIFEVDRRARGLRGWLEEMYNDGEQLVRVRFSQSELEDAEELKEVLEEIIDQYAE

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Crispr_ID: NZ_CP034943_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034943_2

2976001-2976107

Orphan

Consensus_repeat	Method
TGATGGGAATCGAACCCACGACAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034943_2

>merge|NZ_CP034943|2|2976001-2976107|CRISPRCasFinder
TGATGGGAATCGAACCCACGACATCAGCTTGGAAGGCTGAGGTTTTACCACTAAACTACACCCGCAATTTTATTTGGGGCGATTGATGGGAATCGAACCCACGAATG

>NZ_CP034943|2|2|2976001-2976107|CRISPRCasFinder
TGATGGGAATCGAACCCACGACAT	CAGCTTGGAAGGCTGAGGTTTTACCACTAAACTACACCCGCAATTTTATTTGGGGCGAT
TGATGGGAATCGAACCCACGAATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034943.1\|WP_003219296.1\|2964490_2965624_-\|spore-coat-protein-CotSA	unknown	unknown	gnl\|CDD\|340831
NZ_CP034943.1\|WP_003219288.1\|2967474_2969871_-\|glycogen/starch/alpha-glucan-phosphorylase	unknown	unknown	gnl\|CDD\|340853
NZ_CP034943.1\|WP_003222737.1\|2988989_2990462_-\|betaine-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143437
NZ_CP034943.1\|WP_003219279.1\|2973501_2975385_-\|1,4-alpha-glucan-branching-enzyme	unknown	unknown	gnl\|CDD\|273667
NZ_CP034943.1\|WP_003219290.1\|2966978_2967446_+\|TspO/MBR-family-protein	unknown	unknown	gnl\|CDD\|226007
NZ_CP034943.1\|WP_003219297.1\|2963420_2964476_-\|spore-coat-protein-CotS	unknown	unknown	gnl\|CDD\|131952
NZ_CP034943.1\|WP_003222741.1\|2991405_2991951_+\|biofilm-surface-layer-protein-BslA	unknown	unknown	gnl\|CDD\|379999
NZ_CP034943.1\|WP_003222735.1\|2987765_2988974_-\|choline-dehydrogenase	unknown	unknown	gnl\|CDD\|341481
NZ_CP034943.1\|WP_003222724.1\|2983812_2984334_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP034943.1\|WP_003219286.1\|2969857_2971312_-\|glycogen-synthase-GlgA	unknown	unknown	gnl\|CDD\|234809
NZ_CP034943.1\|WP_079996441.1\|2965813_2966887_+\|spore-coat-kinase-CotI	unknown	unknown	gnl\|CDD\|131952
NZ_CP034943.1\|WP_003219299.1\|2962996_2963419_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034943.1\|WP_003222729.1\|2985908_2986433_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376684
NZ_CP034943.1\|WP_003222726.1\|2984358_2985888_-\|flotillin-lipid-rafts-scaffold-protein-FloT	unknown	unknown	gnl\|CDD\|225177
NZ_CP034943.1\|WP_003222739.1\|2990656_2991199_+\|transcriptional-regulator-GbsR	unknown	unknown	gnl\|CDD\|224427
NZ_CP034943.1\|WP_003222733.1\|2987096_2987678_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377051
NZ_CP034943.1\|WP_003222731.1\|2986602_2987091_+\|DinB-family-protein	unknown	unknown	gnl\|CDD\|378981
NZ_CP034943.1\|WP_003219281.1\|2972362_2973505_-\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|179997
NZ_CP034943.1\|WP_003219283.1\|2971308_2972340_-\|glucose-1-phosphate-adenylyltransferase-subunit-GlgD	unknown	unknown	gnl\|CDD\|273966
NZ_CP034943.1\|WP_013308037.1\|2983192_2983771_+\|energy-coupled-thiamine-transporter-ThiT	unknown	unknown	gnl\|CDD\|226377

Protein	Function_ID	Function_description	E-value
NZ_CP034943.1\|WP_003219296.1\|2964490_2965624_-\|spore-coat-protein-CotSA	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.5689e-71
NZ_CP034943.1\|WP_003219288.1\|2967474_2969871_-\|glycogen/starch/alpha-glucan-phosphorylase	gnl\|CDD\|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0
NZ_CP034943.1\|WP_003222737.1\|2988989_2990462_-\|betaine-aldehyde-dehydrogenase	gnl\|CDD\|143437	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.	0
NZ_CP034943.1\|WP_003219279.1\|2973501_2975385_-\|1,4-alpha-glucan-branching-enzyme	gnl\|CDD\|273667	TIGR01515, branching_enzym, alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. This model describes the glycogen branching enzymes which are responsible for the transfer of chains of approx. 7 alpha(1--4)-linked glucosyl residues to other similar chains (in new alpha(1--6) linkages) in the biosynthesis of glycogen. This enzyme is a member of the broader amylase family of starch hydrolases which fold as (beta/alpha)8 barrels, the so-called TIM-barrel structure. All of the sequences comprising the seed of this model have been experimentally characterized. This model encompasses both bacterial and eukaryotic species. No archaea have this enzyme, although Aquifex aolicus does. Two species, Bacillus thuringiensis and Clostridium perfringens have two sequences each which are annotated as amylases. These annotations are aparrently in error. GP\|18143720 from C. perfringens, for instance, contains the note "674 aa, similar to gp:A14658_1 amylase (1,4-alpha-glucan branching enzyme (EC 2.4.1.18) ) from Bacillus thuringiensis (648 aa); 51.1% identity in 632 aa overlap." A branching enzyme from Porphyromonas gingivales, OMNI\|PG1793, appears to be more closely related to the eukaryotic species (across a deep phylogenetic split) and may represent an instance of lateral transfer from this species' host. A sequence from Arabidopsis thaliana, GP\|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP034943.1\|WP_003219290.1\|2966978_2967446_+\|TspO/MBR-family-protein	gnl\|CDD\|226007	COG3476, COG3476, Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) [Signal transduction mechanisms].	1.16796e-39
NZ_CP034943.1\|WP_003219297.1\|2963420_2964476_-\|spore-coat-protein-CotS	gnl\|CDD\|131952	TIGR02906, Spore_coat_protein_S, spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers. [Cellular processes, Sporulation and germination].	8.18658e-127
NZ_CP034943.1\|WP_003222741.1\|2991405_2991951_+\|biofilm-surface-layer-protein-BslA	gnl\|CDD\|379999	pfam17735, BslA, Biofilm surface layer A. This family includes members such as BslA (previously called YuaB). Secreted BslA from Bacillus subtillis has been shown to form surface layers around the biofilm self-assembling at interfaces of B. subtilis biofilms, forming an elastic film. structural analysis revealed that BslA consists of an Ig-type fold with the addition of an unusual, extremely hydrophobic cap region. The hydrophobic cap exhibits physiochemical properties similar to the hydrophobic surface found in fungal hydrophobins; thus, BslA is defined as member of a class of bacterially produced hydrophobins.	1.54556e-46
NZ_CP034943.1\|WP_003222735.1\|2987765_2988974_-\|choline-dehydrogenase	gnl\|CDD\|341481	cd08551, Fe-ADH, iron-containing alcohol dehydrogenases (Fe-ADH)-like. This family contains large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases, insect-type, or short-chain alcohol dehydrogenases, iron-containing alcohol dehydrogenases, among others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.	7.19529e-175
NZ_CP034943.1\|WP_003219286.1\|2969857_2971312_-\|glycogen-synthase-GlgA	gnl\|CDD\|234809	PRK00654, glgA, glycogen synthase GlgA.	0
NZ_CP034943.1\|WP_079996441.1\|2965813_2966887_+\|spore-coat-kinase-CotI	gnl\|CDD\|131952	TIGR02906, Spore_coat_protein_S, spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers. [Cellular processes, Sporulation and germination].	1.44221e-128
NZ_CP034943.1\|WP_003222724.1\|2983812_2984334_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	9.40128e-11
NZ_CP034943.1\|WP_003222729.1\|2985908_2986433_-\|hypothetical-protein	gnl\|CDD\|376684	pfam01957, NfeD, NfeD-like C-terminal, partner-binding. NfeD-like proteins are widely distributed throughout prokaryotes and are frequently associated with genes encoding stomatin-like proteins (slipins). There appear to be three major groups: an ancestral group with only an N-terminal serine protease domain and this C-terminal beta sheet-rich domain which is structurally very similar to the OB-fold domain, associated with its neighboring slipin cluster; a second major group with an additional middle, membrane-spanning domain, associated in some species with eoslipin and in others with yqfA; a final 'artificial' group which unites truncated forms lacking the protease region and associated with their ancestral gene partner, either yqfA or eoslipin. This NefD, C-terminal, domain appears to be the major one for relating to the associated protein. NfeD homologs are clearly reliant on their conserved gene neighbor which is assumed to be necessary for function, either through direct physical interaction or by functioning in the same pathway, possibly involve with lipid-rafts.	0.000385488
NZ_CP034943.1\|WP_003222726.1\|2984358_2985888_-\|flotillin-lipid-rafts-scaffold-protein-FloT	gnl\|CDD\|225177	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown].	2.01864e-121
NZ_CP034943.1\|WP_003222739.1\|2990656_2991199_+\|transcriptional-regulator-GbsR	gnl\|CDD\|224427	COG1510, COG1510, Predicted transcriptional regulators [Transcription].	1.04457e-70
NZ_CP034943.1\|WP_003222733.1\|2987096_2987678_-\|MOSC-domain-containing-protein	gnl\|CDD\|377051	pfam03473, MOSC, MOSC domain. The MOSC (MOCO sulfurase C-terminal) domain is a superfamily of beta-strand-rich domains identified in the molybdenum cofactor sulfurase and several other proteins from both prokaryotes and eukaryotes. These MOSC domains contain an absolutely conserved cysteine and occur either as stand-alone forms or fused to other domains such as NifS-like catalytic domain in Molybdenum cofactor sulfurase. The MOSC domain is predicted to be a sulfur-carrier domain that receives sulfur abstracted by the pyridoxal phosphate-dependent NifS-like enzymes, on its conserved cysteine, and delivers it for the formation of diverse sulfur-metal clusters.	4.02927e-06
NZ_CP034943.1\|WP_003222731.1\|2986602_2987091_+\|DinB-family-protein	gnl\|CDD\|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	7.66024e-17
NZ_CP034943.1\|WP_003219281.1\|2972362_2973505_-\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP034943.1\|WP_003219283.1\|2971308_2972340_-\|glucose-1-phosphate-adenylyltransferase-subunit-GlgD	gnl\|CDD\|273966	TIGR02092, Glycogen_biosynthesis_protein_GlgD, glucose-1-phosphate adenylyltransferase, GlgD subunit. This family is GlgD, an apparent regulatory protein that appears in an alpha2/beta2 heterotetramer with GlgC (glucose-1-phosphate adenylyltransferase, TIGR02091) in a subset of bacteria that use GlgC for glycogen biosynthesis. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP034943.1\|WP_013308037.1\|2983192_2983771_+\|energy-coupled-thiamine-transporter-ThiT	gnl\|CDD\|226377	COG3859, COG3859, Predicted membrane protein [Function unknown].	3.58791e-73

>NZ_CP034943.1|WP_003219279.1|2973501_2975385_-|1,4-alpha-glucan-branching-enzyme
MAAASPTAHDVYLFHEGSLFKSYQLFGSHYRELNGQSGYEFCVWAPQASEVRVAGDFNSWSGEQHVMHRVNESGIWTLFIPDLGEKERYKYEIVTKSGEIRLKADPYATYSEIRPNTASLTYDLAGYSWQDQKWQKKQKANTLYEKPVFIYELHLGSWKKHSDGRHYSYKELSQSLIPYIKEHGFTHIELLPVYEHPYDRSWGYQGTGYYSPTSRFGTPHDLMKFVDECHQENIGVILDWVPGHFCKDAHGLYMFDGEPLYEYQEERDRENWLWGTANFDLGKPEVHSFLISNALYWAELYHIDGFRVDAVANILYWPNQDEHHTNPYAVEFLKKLNQTMREAYPHVMMIAEDSTEWPQVTGTVEEGGLGFHFKWNMGWMNDVLTYMETPPEERRYCHQLISFSLLYAFSEHFVLPFSHDEVVYGKKSLLNKMPGDYWQKFAQYRLLLGYMTAHPGKKLIFMGSEFAQFDEWKDTEQLDWFLDSFPMHQKASVFTQDLLRFYQKSKILYEHDHRAQSFEWIDVHNDEQSIFSFIRYGKRHGEALVIICNFTPAVYHQYDVGVPFLTQYIEMLNSDSETYGGSGQINKKPLAAKKGALHQKPCHITMTIPPYGISILRAVKKRGEIKR
>NZ_CP034943.1|WP_003219281.1|2972362_2973505_-|glucose-1-phosphate-adenylyltransferase
MKKQCVAMLLAGGKGSRLSELTKNMAKPAVSFGGKYRIIDFTLSNCSNSGIDTVGILTQYQPLELNSYIGIGSAWDLDRYNGGVTVLPPYAESSEVKWYKGTASAIYENLNYLNQYDPEYVLILSGDHIYKMDYGKMLDFHIEKKADVTISVIEVSWEEASRFGIMKTDADGTITHFDEKPKFPKSNLASMGIYIFNWPLLKQYLEMDDRNPYSSHDFGKDIIPLLLEEKKKLSAYPFKGYWKDVGTVQSLWEANMDLLKEDSELKLFERKWKIYSVNPNQPPQFISSDAQVHDSLVNEGCVVYGNVSHSVLFQGVTVGKHATVTSSVIMPDVTIGEHVVIENAIVPKGLVLPDGAVIRSEKDIQEVLLVSEEFVEKELI
>NZ_CP034943.1|WP_003219283.1|2971308_2972340_-|glucose-1-phosphate-adenylyltransferase-subunit-GlgD
MFNNQMLGVIDETTYKHSLQDLTAQRSLGAIPFAGRYRLIDFMLSNMVNADIRSVAIFPKYRYRSLMDHLGAGKEWDLHRKKDGLFFFPSPHLHQEYDEFGSFRQFSDHLDYFHRSTQQYAVISNSHTVCNIQFQYVLKRHQEVGCDVTEVFQDGQSLQIYIMSTTLLKDLIYGHSEKGYKTIQEAVEKESSSLTICPYEYSGYAAVIDSVDKYYTHSMELIQPRFWQQVFLPQQPIYTKVKDEPPTKYGKQSTVKNSLVANGCVLEGEVENCILFRAVHIGKGTKLKNCIIMQKTQIGEDCQLEQVISDKDVKIGNATEAAGTAEQPLVLRKGLVQGELMNS
>NZ_CP034943.1|WP_003219286.1|2969857_2971312_-|glycogen-synthase-GlgA
MKVLFAVSECIPFVKSGGLADVAGALPKALARLGNEVAVMLPKYSQIPERWKKRMEKTAECTVAVGWRQQYCGIEHMAEGDVNYYFIDNEYYFNRDSLYGHYDDGERFAFFSRAVLEAAEAVNIQADIVHTHDWHTAMVNYLLKEEYRKHPFYEQMRSILTIHNLQFQGIFPPDVTHDLLGLEMDHFHYERLEYNGFVNFMKAGIIAADHVTTVSPTYRNEILTPYYGEQLEQVLRYRENDVTGILNGIDDTFYQPKSDPYIETHYDSEHLACKEENKTKLQRRMGLPERSDIPLISMVTRLTKQKGLDLVRRIMHELLEEQDIQLVVLGTGEREFEDYFRYAEFAFHEKCRAYIGFDEPLAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGSIPIVRETGGLYDTVRSYQEEEGTGNGFTFSAFNAHDLKFTIERALSFYRQKDVWKSIMKTAMNADYSWEQSAKEYQRIFEHVTRSGRDVLE
>NZ_CP034943.1|WP_003219288.1|2967474_2969871_-|glycogen/starch/alpha-glucan-phosphorylase
MFSSKERFAALFLKRLEMTCGKSFKDSAKLDQYKTLGNMVREYISADWIQTNEKSRSNSGKQTYYLSIEFLLGQLLEQNLMNLGVRDVVEAGLKEIGINLEEILQVESDAGLGNGGLGRLAACFLDSLASLNLPGHGMGIRYKHGLFEQKIVDGHQVELPEQWLKNGNVWEVRNADQAVDVPFWGEVHMTEKSGRLHFRHEQATIVTAVPYDIPIIGYETGTVNTLRLWNAEPYAHYHGGNILSYKRETEAVSEFLYPDDTHDEGKILRLKQQYFLVCASLKSIVNNYRKTNKSLSGLHKKVSIHINDTHPALAVPELMRILLDEENMSWEEAWHITVHTISYTNHTTLSEALEKWPIHLFKPLLPRMYMIIEEINERFCRAVWGKYPGDWKRIEDMAITAHGVVKMAHLAIVGSYSVNGVAKIHSDILKEREMRDFHLLFPNRFNNKTNGIAHRRWLLKANPGLSAIITEAIGNEWVKQPESLIRLEPYASDPGFIEQFQNNKNRKKQELADLIFCTAGVAVNPDSIFDVQVKRLHAYKRQLLNVLHIMYLYNRLKEDSGFSIYPQTFIFGAKASPSYYYAKKIIKLIHSVAEKVNYDPAVKQLIKIVFLENYRVSMAERIFPASDVSEQISTASKEASGTGNMKFMMNGALTIGTHDGANIEILERVGPDCIYTFGLKADEVLSYQENGGYRSREYYQHDRRIRQVADQLINGFFEGEANEFESIYDSLLPHNDEYFVLKDFSSYADAQERIQADYRDRRKWSERSILNIAHSGYFSSDRTIREYAKNIWGIRPMM
>NZ_CP034943.1|WP_003219290.1|2966978_2967446_+|TspO/MBR-family-protein
MKKIVGAIVVFVITYALFSAADYLFPIDQEWYNSLKKPDWTPPGSAIGIIWAILFALISLSAAIVYAAFSFKNAKSFWFALLINYILNQAFSYFQFTQKNLLAASIDCLLVAITAIVLMIIAKKYSRAASYLLLPYFLWSAFATFLSFTIYSMNL
>NZ_CP034943.1|WP_079996441.1|2965813_2966887_+|spore-coat-kinase-CotI
MCPLMAENQEVIEEGNSSELPLSAEDEKKLTELAENVLQGWDVQTEKIDVIQGNQMALVWKVHTGSGAVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGIIPNKKGSLYSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPVFTKLGRWPNHYTKRCKQMETWKLMAQMEKEDPFSQLYLQEIDSFIEDGLSIKDRLMHSSYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDEETFHVMLNAYESRAPLTDEQKQVMFIDMLFPYELYDVIREKYVRKSALPKEELESAFEYERIKANALQQLI
>NZ_CP034943.1|WP_003219296.1|2964490_2965624_-|spore-coat-protein-CotSA
MKIALIATEKLPVPSVRGGAIQIYLEAVAPLIAKKHEVTVFSIKDPNLADRETADGVHYVHLDEDRYEDAVGEELKKGRFDLVHVCNRPSWVPKLKKQAPNAVFILSVHNEMFAYDKVSQTEGERCIDSVAQIVTVSDYIGRTITSRFPAARSKTKTVYSGVDLKAYHPRWTKEGQRAREDMRSELDLHGKKIVLFVGRLSKVKGPHILLQALPDIIEEHPDVMMVFIGSKWFGDNELNNYVKHLHTLGAMQKDHVTFIQFVKPKDIPRLYTMSDVFVCSSQWQEPLARVHYEAMAAGLPIITSNRGGNPEVIEEGKNGYIIHDFENPKQYAGYINDLLLSSEKRERLGKYSRRVAESQFGWQRVAENLLSVYEKNR
>NZ_CP034943.1|WP_003219297.1|2963420_2964476_-|spore-coat-protein-CotS
MYQKEHEEQIVSDILNYYPFHIEHVALKSNKSGRKIWEIQTDQGLKLLKEAQMKPERMLFITQAHAHLQEKGLPVAPIHQTKNGGSCLGTDRVSYSLYDKVTGKEMIYYDAEQMKKVMSFAGHFHHASKGYVCTDESKKRSRLGKWHKLYRWKLQELEGNMQIAASYPDDLFSQTFLKHADKMLARGKEALQALDESEYENWTKETLEHGGFCFQDFTLARLTEIDGEPFLKELHSITYDLPSRDLRILLNKVMVKLSVWDTDFMVALLAAYDAVYPLTEKQYEVVWIDLAFPHLFCAIGHKYYLKQKKTWSDEKYNWALQNMISVEESKDAFLDKMPELYKKIKAYREAN
>NZ_CP034943.1|WP_003219299.1|2962996_2963419_-|hypothetical-protein
MRSSRQKASISKLDLDQFVFTPPGSMGWQAHDTSSAEKEEEEKHLAVGSIRELPNINAPKEFQEETKETETDHKVMDDKETKLETIIEPEEEHDSKRSEPPIEEEDEEPDLVEEARVEIIVLPSESAPAPWFSQTVKRKA
>NZ_CP034943.1|WP_013308037.1|2983192_2983771_+|energy-coupled-thiamine-transporter-ThiT
MNQSKQLVRLIEIAIMTAAAVILDIVSGMFLRMPQGGSVSIMMIPIFLISFRWGVKAGLTTGLLTGLVQIAIGNLFAQHPIQLLLDYIVAFAAIGISGCFASSVRKAAVSKTKGKLIISVVSAVFIGSFLRYAAHVISGAVFFGSYAPKGTPVWIYSLTYNATYMVPSFIICGIVLCLLFMTAPRLLKTDKV
>NZ_CP034943.1|WP_003222724.1|2983812_2984334_-|GNAT-family-N-acetyltransferase
MATVREAKLEDIKDIAKVHVDSWRTTYQGIVEAEYLKSLSCKEFEDKWKSRSLKGVFVARDEKGSIFGFASFGPIRSEQEGYDGELYAIYLLEEHQRQGAGRALLAKGVEFLLHHGFSSMFVWVIEKNPSITFYEAYSPERIAEDSFEIAGDSLKEVGFGWPDLSALKTALNR
>NZ_CP034943.1|WP_003222726.1|2984358_2985888_-|flotillin-lipid-rafts-scaffold-protein-FloT
MTMPIIIVIGVVFFLLIALIAVFITKYRTAGPDEALIVTGSYLGNKNVHVDEGGNRLKIVRGGGTFVLPVFQQAEPLSLLSSKLDVSTPEVYTEQGVPVMADGTAIIKIGGSIGEIATAAEQFLGKSKDDREQEAREVLEGHLRSILGSMTVEEIYKNREKFSQEVQRVASQDLAKMGLVIVSFTIKDVRDKNGYLESLGKPRIAQVKRDADIATAEADKETRIKRAEADKDAKKSELERATEIAEAEKINQLKMAEYRREQDTAKANADQAYDLETARARQQVTEQEMQVKIIERQKQIELEEKEILRRERQYDSEVKKKADADRYSVEQSAAAEKAKQLAEADAKKYSIEAMAKAEAEKVRIDGLAKAEAEKAKGETEAEVIRLKGLAEAEAKEKIAAAFEQYGQAAIFDMIVKMLPEYAKQAAAPLSNIDKITVVDTGGSGESSGANKVTSYATNLMSSLQESLKASSGIDVKEMIENFSGKGNVKQSINELTNEIKEAKTVQKPE
>NZ_CP034943.1|WP_003222729.1|2985908_2986433_-|hypothetical-protein
MELFGVPIHTIYLYTLIIAGSLTLLFVFFGDVFAGLSEGIPFLNPTLLLAFFTCFSASGYIGELILPLSSLLIALLSCILSIMLVVLLHIFVLVPLSSAEESLVYIEDDLRGRVGKVITAVPVDGFGEVVIEGIGGTISKSAVSFDNEQISYGTAVLVVDVNNGVLSVTPHEPI
>NZ_CP034943.1|WP_003222731.1|2986602_2987091_+|DinB-family-protein
MSIFNEARLETWNEVKGLSDEKLNQKPSAEEWSIREVLDHLKKIDMAAQKMLKERVKEAPVKKVEEKQLEVAQDRNNRRKAPSHLEPEHDFISGSQMKRELDVVREQLTAAIASLKEEDFERVLPHPVFQELTVRQWIDFIGHHEKRHLSQIKEIKERIERA
>NZ_CP034943.1|WP_003222733.1|2987096_2987678_-|MOSC-domain-containing-protein
MWKRMAAKAEGVYIADTESFVTKQMDKLDFDYGGIPGDLHFGLTKKAGAREPMFSRGTEIFNRRQISIVSIEECDEIALKMGVPSILPEWLGANVAVSGIPDLTSLKEGSRLIFPSGAALLCEGENDPCIQPGEVIQSYYPDKPKLAPAFVRHALGIRGIVCIVERPGAVYAGDEIDVHSYQRKAKPRKAERV
>NZ_CP034943.1|WP_003222735.1|2987765_2988974_-|choline-dehydrogenase
MTLNMKIESMHKFHTFEIPTVIKHGIGAVKNTGEEVAALGVSKALLVTDPGIYKAGVVDPVIESLKEAGIEVVLFNKVEPNPPVRLVNEGSELYKKENCNGLVAVGGGSSMDTAKAIGVEATHEGSVLDYEAADGKKPLENRIPPLTTIPTTAGTGSEVTQWAVITDEEREFKFNTGGPLIAAHLTIIDPELHISMPPHVTAMTGIDALAHAIECYTMKFAQPITDAVALMAIEYAAHYIKRAFADGEDLEARYGMAQAAMLAGLSYGSESAGAAHAMSQTLGGIIPVAHGQGVAAMMGPVMEYNWKGYPEKFARIAKAFGIDTSNMTTEEAAKASVNWMYDLVEDLEVPTLEEQGVSPDMIERLSKEAMKDPQTFGNPRDLNEKAYNWIYKRCFNLTPKTV
>NZ_CP034943.1|WP_003222737.1|2988989_2990462_-|betaine-aldehyde-dehydrogenase
MSQTLYIDGEWVSAEKEQIRSIINPFNQEEIAIVSEGGREDAIKAIAAARRAFDKGEWSSLPGLERGKNVLKIAELIRRDLDELAELESLDTGKTLEESKADMDDIANVFQYYAGLADKDGGEIISSPIPDSESKIIREPIGVCGQITPWNYPLLQASWKIAPALAAGNTIVMKPSEITPLTTIKVFKLMEEAGVPKGVANLVLGPGATVGDELAVNKDVDLISFTGGIETGKKIMQAASGNVKKIALELGGKNPNIVFKDADLEVAVDQALNAVFFHAGQVCSAGSRLLVEDAIHDQFLAELVKRAKRIKLGNGFHAETESGPLISAEHRAKVEKYVEIGIKEGAKLETGGKRPKDPALQNGFFYEPTIFSNCKSDMRIVQEEVFGPVLTVETFSSEKEVIALANDTIYGLAGAVWSKDIEKCERVAARLRMGTVWINDFHPYFAQAPWGGYKQSGFGRELGKIGLEEYTEVKHVYRNTKPAAVNWFNS
>NZ_CP034943.1|WP_003222739.1|2990656_2991199_+|transcriptional-regulator-GbsR
MDENPEVAAIEQARDLVIDSIAETMDLYGITRSVGILYGTMYMRDEMTLDEMREELQMSKPSMSTGVKKLQDLNVVKKTFHRGIRKHTFVAEKDFFKFFTNFFPPKWEREVQVNVAAIEEAQADLQEVLNKEGLNEDIKNEALQLYEQLESSKAYYDWLKRLAESVQSGEIFKFIPIETK
>NZ_CP034943.1|WP_003222741.1|2991405_2991951_+|biofilm-surface-layer-protein-BslA
MKRKLLSSLAISALSLGLLVSAPSASFAAESKSTSAHTESTMKTQSTASLFATITGASKTEWSFSDIELTYRPNTLLSLGVMEFTLPSGFTANTKDTMNGRALRETQILNNGKTVRIPLALDLLGAGEFKLKLNNKTLPAAGTYTFRAENKSLSIGNKFYAEASIDVAKRSTPPTQPCGCN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP034943_2	2.1\|2976025\|59\|NZ_CP034943\|CRISPRCasFinder	2976025-2976083	59	NZ_CP015439	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence	255887-255945	7	0.881
NZ_CP034943_2	2.1\|2976025\|59\|NZ_CP034943\|CRISPRCasFinder	2976025-2976083	59	NZ_CP010587	Bacillus megaterium Q3 plasmid p1, complete sequence	838-896	8	0.864
NZ_CP034943_2	2.1\|2976025\|59\|NZ_CP034943\|CRISPRCasFinder	2976025-2976083	59	NZ_CP023319	Bacillus megaterium strain A plasmid p2, complete sequence	75825-75883	8	0.864
NZ_CP034943_2	2.1\|2976025\|59\|NZ_CP034943\|CRISPRCasFinder	2976025-2976083	59	NZ_CP024037	Bacillus aryabhattai strain K13 plasmid unnamed2	10418-10476	8	0.864
NZ_CP034943_2	2.1\|2976025\|59\|NZ_CP034943\|CRISPRCasFinder	2976025-2976083	59	NZ_CP026740	Bacillus megaterium strain YC4-R4 plasmid unnamed4	70765-70823	8	0.864
NZ_CP034943_2	2.1\|2976025\|59\|NZ_CP034943\|CRISPRCasFinder	2976025-2976083	59	NC_017139	Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence	1319-1377	8	0.864
NZ_CP034943_2	2.1\|2976025\|59\|NZ_CP034943\|CRISPRCasFinder	2976025-2976083	59	NC_020451	Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence	1961-2019	9	0.847
NZ_CP034943_2	2.1\|2976025\|59\|NZ_CP034943\|CRISPRCasFinder	2976025-2976083	59	NZ_CP015440	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence	64774-64832	11	0.814
NZ_CP034943_2	2.1\|2976025\|59\|NZ_CP034943\|CRISPRCasFinder	2976025-2976083	59	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	483791-483849	13	0.78
NZ_CP034943_2	2.1\|2976025\|59\|NZ_CP034943\|CRISPRCasFinder	2976025-2976083	59	NZ_LR134399	Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence	57361-57419	14	0.763

1. spacer 2.1|2976025|59|NZ_CP034943|CRISPRCasFinder matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 7, identity: 0.881

cagcttggaaggctgaggttttaccactaaactacacccgcaattttatttggggcgat-	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgc-atattatatacgacggtt	Protospacer
***************************************** ** **** *. *.**.*

2. spacer 2.1|2976025|59|NZ_CP034943|CRISPRCasFinder matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.864

cagcttggaaggctgaggttttaccactaaactacacccgcaattttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatattttaaagtggcggt	Protospacer
******************************************  ***    * ****.*

3. spacer 2.1|2976025|59|NZ_CP034943|CRISPRCasFinder matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.864

cagcttggaaggctgaggttttaccactaaactacacccgcaattttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatattttaaagtggcggt	Protospacer
******************************************  ***    * ****.*

4. spacer 2.1|2976025|59|NZ_CP034943|CRISPRCasFinder matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 8, identity: 0.864

cagcttggaaggctgaggttttaccactaaactacacccgcaattttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatattttaaagtggcggt	Protospacer
******************************************  ***    * ****.*

5. spacer 2.1|2976025|59|NZ_CP034943|CRISPRCasFinder matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 8, identity: 0.864

cagcttggaaggctgaggttttaccactaaactacacccgcaattttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatattttaaagtggcggt	Protospacer
******************************************  ***    * ****.*

6. spacer 2.1|2976025|59|NZ_CP034943|CRISPRCasFinder matches to NC_017139 (Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence) position: , mismatch: 8, identity: 0.864

cagcttggaaggctgaggttttaccactaaactacacccgcaattttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatattttaaagtggcggt	Protospacer
******************************************  ***    * ****.*

7. spacer 2.1|2976025|59|NZ_CP034943|CRISPRCasFinder matches to NC_020451 (Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence) position: , mismatch: 9, identity: 0.847

cagcttggaaggctgaggttttaccactaaactacacccgcaattttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcattttagttatggcccgg	Protospacer
****************************************** *** .**  ** * .

8. spacer 2.1|2976025|59|NZ_CP034943|CRISPRCasFinder matches to NZ_CP015440 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence) position: , mismatch: 11, identity: 0.814

cagcttggaaggctgaggttttaccactaaactacacccgcaattttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcataataatatataccatt	Protospacer
******************************************   * ** *. . *. *

9. spacer 2.1|2976025|59|NZ_CP034943|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 13, identity: 0.78

cagcttggaaggctgaggttttaccactaaactacacccgc---------aattttattt	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcatggttaaaagttttgcc-	Protospacer
*****************************************         *.****...

10. spacer 2.1|2976025|59|NZ_CP034943|CRISPRCasFinder matches to NZ_LR134399 (Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence) position: , mismatch: 14, identity: 0.763

cagcttggaaggctgaggttttaccactaaactacacccgc------aattttatttggg	CRISPR spacer
cagcttggaaggctgtagttttaccactaaactacacccgcatagtaagtagttcttag-	Protospacer
*************** .************************      *.*  * .**.*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

679590 : 687956

Synechococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003219407.1\|679590_680886_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	2.2e-18	25.4
WP_003219408.1\|680960_681686_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3G7P8	Synechococcus_phage	9.2e-46	44.1
WP_003219409.1\|681678_681933_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003219410.1\|681929_682613_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_003219411.1\|682596_684825_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	6.5e-159	40.1
WP_032727235.1\|684800_686231_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.0e-52	32.5
WP_003219413.1\|686331_687372_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	2.8e-64	41.4
WP_003219414.1\|687368_687956_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	5.4e-28	41.0

DBSCAN-SWA_2

1282909 : 1358482

Bacillus_phage(23.26%)

terminase,protease,tail,holin,portal,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013307962.1\|1282909_1284181_+	ATPase YjoB	A0A1V0SEI6	Indivirus	5.6e-14	36.4
WP_079288553.1\|1284325_1285462_+	response regulator aspartate phosphatase RapA	A0A1P8CWN8	Bacillus_phage	3.7e-94	47.4
WP_003220543.1\|1285451_1285586_+	phosphatase RapA inhibitor PhrA	NA	NA	NA	NA
WP_003220545.1\|1285617_1285872_-	hypothetical protein	NA	NA	NA	NA
WP_003220547.1\|1285995_1286949_+	LysM peptidoglycan-binding domain-containing protein	A0A218KC88	Bacillus_phage	2.8e-66	74.2
WP_003220548.1\|1286985_1287363_-	PH domain-containing protein	A5GYQ0	Lactococcus_phage	7.9e-17	42.3
WP_003220550.1\|1287469_1288072_+	poly-gamma-glutamate hydrolase family protein	A0A0Y0AJU6	Bacillus_phage	7.9e-43	47.8
WP_003220552.1\|1288146_1288983_+	manganese catalase	NA	NA	NA	NA
WP_003220554.1\|1289027_1289624_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	5.6e-41	53.0
WP_003220555.1\|1289785_1290127_-	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	5.9e-19	45.8
WP_003220557.1\|1290306_1290486_+	hypothetical protein	NA	NA	NA	NA
WP_003220558.1\|1290472_1291309_+	hypothetical protein	S6BFM4	Thermus_phage	3.7e-22	30.1
WP_079996342.1\|1291208_1292009_+	ATP-binding protein	A6XMI1	Bacillus_virus	1.6e-62	53.0
WP_003220561.1\|1292008_1292176_+	hypothetical protein	NA	NA	NA	NA
WP_003220565.1\|1292260_1292620_+	hypothetical protein	NA	NA	NA	NA
WP_003220566.1\|1292606_1292813_+	phage-like element PBSX protein XtrA	A0A2H4J4M6	uncultured_Caudovirales_phage	7.1e-12	48.5
WP_003220567.1\|1292927_1293437_+	sigma-70 family RNA polymerase sigma factor	A0A1L2JY33	Aeribacillus_phage	1.4e-21	38.0
WP_003220569.1\|1293554_1294349_+\|terminase	terminase	A0A0S2MVB6	Bacillus_phage	3.0e-58	49.8
WP_003220571.1\|1294345_1295647_+\|terminase	PBSX family phage terminase large subunit	A0A2P1JTW5	Anoxybacillus_phage	2.2e-154	60.7
WP_079996578.1\|1295650_1297138_+\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	2.9e-139	55.5
WP_003220576.1\|1297157_1297985_+\|portal	phage portal protein	A0A1B1P7E4	Bacillus_phage	6.1e-54	58.7
WP_003220578.1\|1298009_1298945_+\|portal	phage portal protein	A0A1B1P7E3	Bacillus_phage	8.6e-105	63.8
WP_003220581.1\|1298966_1299350_+	DUF3199 family protein	A0A1B1P7D6	Bacillus_phage	2.4e-13	39.6
WP_003220584.1\|1299346_1299703_+	YqbH/XkdH family protein	NA	NA	NA	NA
WP_003220585.1\|1299699_1300185_+	HK97 gp10 family phage protein	A0A249XXA4	Clostridium_phage	8.0e-38	46.5
WP_003220587.1\|1300197_1300638_+	hypothetical protein	NA	NA	NA	NA
WP_003220589.1\|1300641_1300860_+	hypothetical protein	NA	NA	NA	NA
WP_003220591.1\|1300856_1302257_+\|portal	phage portal protein	A0A0A7RTT5	Clostridium_phage	2.2e-80	40.0
WP_003220592.1\|1302258_1302702_+\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	1.1e-25	45.2
WP_003220594.1\|1302792_1303239_+\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	7.7e-11	36.8
WP_003220596.1\|1303280_1303421_+	hypothetical protein	NA	NA	NA	NA
WP_013307966.1\|1303421_1308431_+	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	3.6e-40	44.0
WP_003218424.1\|1308423_1309083_+	LysM peptidoglycan-binding domain-containing protein	G3MBQ1	Bacillus_virus	1.8e-08	44.2
WP_003218425.1\|1309098_1310076_+\|portal	phage portal protein	H7BV96	unidentified_phage	8.6e-39	32.3
WP_003218427.1\|1310075_1310342_+	DUF2577 family protein	S6C459	Thermus_phage	8.4e-05	35.2
WP_003218430.1\|1310398_1310824_+	DUF2634 domain-containing protein	A0A0A7RTU4	Clostridium_phage	2.1e-13	37.5
WP_003218432.1\|1310816_1311863_+\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	9.8e-73	43.8
WP_003218434.1\|1311846_1312425_+	YmfQ family protein	A0A2H4J717	uncultured_Caudovirales_phage	3.9e-15	33.1
WP_003218436.1\|1312421_1312694_+	hypothetical protein	NA	NA	NA	NA
WP_003218438.1\|1312696_1315138_+	hypothetical protein	A0A2H4J4R1	uncultured_Caudovirales_phage	1.1e-13	52.7
WP_003218439.1\|1315155_1315482_+\|portal	phage portal protein	NA	NA	NA	NA
WP_003218441.1\|1315478_1315643_+	XkdX family protein	A0A2H4JAA1	uncultured_Caudovirales_phage	4.2e-15	66.0
WP_003218443.1\|1315687_1316527_+	hypothetical protein	NA	NA	NA	NA
WP_003218444.1\|1316579_1316849_+	protein xhlA	A0A2H4JD40	uncultured_Caudovirales_phage	2.5e-25	67.0
WP_003218447.1\|1316861_1317125_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	3.6e-24	65.5
WP_003218449.1\|1317137_1318031_+	LysM peptidoglycan-binding domain-containing protein	Q9ZXD7	Bacillus_phage	1.7e-81	67.9
WP_136654612.1\|1318068_1318206_-	hypothetical protein	NA	NA	NA	NA
WP_003218451.1\|1318291_1318462_-	type II toxin-antitoxin system SpoIISB family antitoxin	NA	NA	NA	NA
WP_003218453.1\|1318461_1319208_-	toxin-antitoxin-antitoxin system toxin SpoIISA	NA	NA	NA	NA
WP_003218455.1\|1319317_1320319_-	inorganic phosphate transporter	NA	NA	NA	NA
WP_003218470.1\|1320331_1320949_-	DUF47 domain-containing protein	NA	NA	NA	NA
WP_003218471.1\|1321225_1322542_-	serine/threonine exchanger	NA	NA	NA	NA
WP_003218472.1\|1322924_1323875_+	ring-cleaving dioxygenase	NA	NA	NA	NA
WP_003218473.1\|1323975_1324122_+	hypothetical protein	NA	NA	NA	NA
WP_003218474.1\|1324129_1326316_+	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_003218475.1\|1326327_1327299_+	glycosyltransferase family 2 protein	I1TED8	Salmonella_phage	5.5e-62	41.3
WP_003218476.1\|1327794_1329153_-\|protease	serine protease HtrA	A0A1B1IT49	uncultured_Mediterranean_phage	1.9e-23	33.0
WP_003218477.1\|1329325_1330144_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
WP_003218479.1\|1330272_1331097_+	D-aminopeptidase DppA	NA	NA	NA	NA
WP_003218480.1\|1331112_1332039_+	dipeptide ABC transporter permease DppB	NA	NA	NA	NA
WP_003218481.1\|1332044_1333007_+	dipeptide ABC transporter permease DppC	NA	NA	NA	NA
WP_003218482.1\|1333011_1334019_+	dipeptide ABC transporter ATP-binding subunit DppD	G9BWD6	Planktothrix_phage	5.2e-15	28.3
WP_079996581.1\|1334021_1335671_+	dipeptide ABC transporter substrate-binding protein DppE	NA	NA	NA	NA
WP_003218484.1\|1335758_1336718_+	LD-carboxypeptidase	NA	NA	NA	NA
WP_003218485.1\|1336714_1337815_+	dipeptide epimerase	NA	NA	NA	NA
WP_003218486.1\|1337811_1338702_+	C40 family peptidase	A0A0A8WIF2	Clostridium_phage	8.4e-17	43.9
WP_003218487.1\|1338714_1339704_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	3.2e-17	34.5
WP_003218488.1\|1339743_1340790_-	6-phosphogluconolactonase	NA	NA	NA	NA
WP_003218490.1\|1340877_1341738_-	hypothetical protein	NA	NA	NA	NA
WP_014476577.1\|1341897_1342416_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_003218494.1\|1342653_1343853_+	NO-inducible flavohemoprotein	NA	NA	NA	NA
WP_003218495.1\|1343925_1344156_-	hypothetical protein	NA	NA	NA	NA
WP_003218496.1\|1344309_1345041_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_003218497.1\|1345133_1345661_+	DinB family protein	NA	NA	NA	NA
WP_003218498.1\|1345650_1346166_+	GNAT family N-acetyltransferase	G9BWD5	Planktothrix_phage	1.9e-13	30.1
WP_003218499.1\|1346388_1346727_+	multidrug efflux SMR transporter subunit YkkC	NA	NA	NA	NA
WP_003218500.1\|1346726_1347044_+	multidrug efflux SMR transporter subunit YkkD	NA	NA	NA	NA
WP_003218501.1\|1347114_1348017_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_003218502.1\|1348377_1349475_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.3e-72	42.6
WP_003218503.1\|1349486_1350734_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	4.7e-98	50.1
WP_003218504.1\|1350862_1351288_+	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_003218505.1\|1351320_1351764_-	organic hydroperoxide resistance transcriptional regulator OhrR	NA	NA	NA	NA
WP_003218506.1\|1351905_1352316_+	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_013307967.1\|1352440_1353544_+	glycosyltransferase	NA	NA	NA	NA
WP_003218510.1\|1353549_1354020_-	nucleoside deaminase	S4VYZ2	Pandoravirus	1.4e-26	45.8
WP_003218512.1\|1354154_1354781_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_003218515.1\|1354819_1357108_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_003218517.1\|1357522_1358482_-\|protease	serine protease Isp	A0A127AWU5	Bacillus_phage	2.3e-76	50.5

DBSCAN-SWA_3

1837350 : 1844076

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003221104.1\|1837350_1837743_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	G3MBF1	Bacillus_virus	3.8e-30	59.1
WP_003221106.1\|1837702_1839805_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	U5PY35	Bacillus_phage	0.0e+00	86.8
WP_003221108.1\|1839822_1840812_+	class 1b ribonucleoside-diphosphate reductase subunit beta	F8WQ21	Bacillus_phage	5.1e-156	84.1
WP_003221111.1\|1840860_1841481_+	hypothetical protein	A0A127AYS1	Bacillus_phage	5.4e-47	49.3
WP_003221113.1\|1841544_1842312_-	N-acetylmuramoyl-L-alanine amidase	E5DV68	Deep-sea_thermophilic_phage	5.3e-52	49.6
WP_032727209.1\|1842873_1843077_+	hypothetical protein	NA	NA	NA	NA
WP_019714490.1\|1843107_1844076_+	stage V sporulation protein K	G3MAX6	Bacillus_virus	2.3e-52	40.5

DBSCAN-SWA_4

1966709 : 2006258

Bacillus_phage(71.79%)

terminase,head,protease,tail,holin,capsid,portal,integrase,plate

attL 1984027:1984041|attR 2016339:2016353

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003220196.1\|1966709_1967273_+	hypothetical protein	Q9ZXD6	Bacillus_phage	8.0e-21	37.0
WP_003220197.1\|1967370_1967559_+	hypothetical protein	A0A2H4J4T3	uncultured_Caudovirales_phage	9.4e-11	50.0
WP_003220199.1\|1967929_1968487_+	hypothetical protein	NA	NA	NA	NA
WP_003220201.1\|1968553_1969531_-	LysM peptidoglycan-binding domain-containing protein	A0A218KC88	Bacillus_phage	3.1e-65	62.3
WP_003220203.1\|1969588_1969852_-\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	3.2e-25	69.0
WP_003220204.1\|1969864_1970077_-	hypothetical protein	A0A290GDY2	Caldibacillus_phage	1.4e-15	59.4
WP_003220205.1\|1970132_1970306_-	XkdX family protein	Q9ZXD9	Bacillus_phage	1.6e-17	71.9
WP_003220206.1\|1970305_1970677_-	hypothetical protein	Q9ZXE0	Bacillus_phage	3.9e-24	50.8
WP_003220207.1\|1970689_1972480_-\|plate	phage baseplate upper protein	M4ZRP1	Bacillus_phage	4.6e-46	46.0
WP_003220211.1\|1972659_1972968_-	hypothetical protein	NA	NA	NA	NA
WP_003220213.1\|1972983_1974879_-	hypothetical protein	A0A185AMX0	Staphylococcus_phage	3.5e-44	32.5
WP_003220214.1\|1974915_1976622_-	alkaline phosphatase	D6R400	Bacillus_phage	1.8e-270	82.4
WP_032727204.1\|1976633_1977473_-\|tail	phage tail family protein	D6R3Z9	Bacillus_phage	5.0e-136	82.8
WP_003220218.1\|1977472_1981351_-\|tail	phage tail tape measure protein	D6R3Z8	Bacillus_phage	0.0e+00	81.2
WP_013307994.1\|1981363_1981543_-	hypothetical protein	D6R3Z7	Bacillus_phage	4.3e-13	70.4
WP_003220222.1\|1981545_1981884_-	hypothetical protein	Q9ZXE8	Bacillus_phage	3.0e-39	70.5
WP_003220224.1\|1981938_1982553_-	hypothetical protein	Q9ZXE9	Bacillus_phage	3.3e-97	88.1
WP_003220225.1\|1982556_1982934_-	DUF3168 domain-containing protein	Q9ZXF0	Bacillus_phage	1.1e-39	66.1
WP_003220228.1\|1982930_1983314_-	HK97 gp10 family phage protein	Q9ZXF1	Bacillus_phage	9.4e-58	85.0
WP_003220230.1\|1983306_1983678_-\|head	phage head closure protein	Q9ZXF2	Bacillus_phage	1.0e-40	65.9
WP_003220232.1\|1983610_1983958_-\|head,tail	phage gp6-like head-tail connector protein	Q9ZXF3	Bacillus_phage	7.0e-52	87.8
WP_003220234.1\|1983973_1984465_-	collagen-like protein	D6R3Z0	Bacillus_phage	5.1e-24	66.3
1984027:1984041	attL	NA	NA	NA	NA
WP_003220237.1\|1984492_1984810_-	hypothetical protein	Q9ZXF5	Bacillus_phage	4.9e-36	77.0
WP_003220239.1\|1984821_1986015_-\|capsid	phage major capsid protein	Q9ZXF6	Bacillus_phage	1.0e-214	96.2
WP_003220242.1\|1986051_1986678_-\|head,protease	HK97 family phage prohead protease	Q9ZXF7	Bacillus_phage	1.8e-106	92.8
WP_032727203.1\|1986667_1987915_-\|portal	phage portal protein	D6R3Y6	Bacillus_phage	3.6e-215	85.8
WP_013307997.1\|1987920_1988139_-	hypothetical protein	Q9ZXF9	Bacillus_phage	8.3e-27	83.3
WP_003220248.1\|1988151_1989861_-\|terminase	terminase large subunit	D6R3Y4	Bacillus_phage	0.0e+00	92.8
WP_003220250.1\|1989860_1990394_-\|terminase	phage terminase small subunit P27 family	Q9ZXG2	Bacillus_phage	5.7e-69	80.8
WP_003220252.1\|1990465_1990807_-	hypothetical protein	Q9T203	Bacillus_phage	3.5e-40	68.5
WP_003220254.1\|1990775_1991150_-	HNH endonuclease	Q38456	Bacillus_phage	1.2e-62	83.9
WP_003220256.1\|1991256_1992012_-	hypothetical protein	NA	NA	NA	NA
WP_003220259.1\|1992074_1992413_-	hypothetical protein	NA	NA	NA	NA
WP_003220262.1\|1992606_1993359_-	hypothetical protein	NA	NA	NA	NA
WP_003220264.1\|1993591_1994134_-\|integrase	tyrosine-type recombinase/integrase	D2XR58	Bacillus_phage	5.8e-61	63.9
WP_003220267.1\|1994133_1994583_-	ArpU family transcriptional regulator	S6AVV9	Thermus_phage	9.7e-38	56.6
WP_003220270.1\|1994822_1995506_-	hypothetical protein	NA	NA	NA	NA
WP_003220272.1\|1995532_1996039_-	hypothetical protein	NA	NA	NA	NA
WP_003220275.1\|1996091_1996988_-	DNA (cytosine-5-)-methyltransferase	A8YQM6	Lactobacillus_phage	1.4e-64	47.1
WP_003220277.1\|1997000_1997249_-	hypothetical protein	A0A2H4JA61	uncultured_Caudovirales_phage	7.8e-05	49.2
WP_003220279.1\|1997245_1997473_-	hypothetical protein	NA	NA	NA	NA
WP_003220281.1\|1997469_1997787_-	hypothetical protein	NA	NA	NA	NA
WP_003220282.1\|1997829_1998027_-	hypothetical protein	NA	NA	NA	NA
WP_003220287.1\|1998272_1998413_-	BH0509 family protein	NA	NA	NA	NA
WP_003220290.1\|1998520_1999069_-	hypothetical protein	A0A0K2CYJ0	Paenibacillus_phage	4.6e-05	39.3
WP_003220295.1\|1999384_2000215_-	ATP-binding protein	F0PII2	Enterococcus_phage	2.2e-27	35.9
WP_003220297.1\|2000198_2001071_-	replication protein	V9QKF6	Oenococcus_phage	4.5e-47	41.4
WP_003220299.1\|2001063_2001282_-	hypothetical protein	NA	NA	NA	NA
WP_003220300.1\|2001296_2001626_-	DUF771 domain-containing protein	A0A1B1IME6	Lactococcus_phage	2.3e-12	39.8
WP_003220302.1\|2001760_2001964_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003220304.1\|2002129_2002528_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003220308.1\|2002611_2002812_+	hypothetical protein	NA	NA	NA	NA
WP_003220312.1\|2002964_2004065_-	transcriptional regulator	NA	NA	NA	NA
WP_003220314.1\|2004319_2005429_+\|integrase	site-specific integrase	Q5YAA6	Bacillus_phage	1.1e-114	57.5
WP_003220317.1\|2005712_2006258_-\|integrase	site-specific integrase	A0A0S2GLG4	Bacillus_phage	1.0e-41	50.8
2016339:2016353	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2294577 : 2300669

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003223904.1\|2294577_2295171_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.0e-14	35.4
WP_032727417.1\|2295160_2295916_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	5.5e-09	28.3
WP_003223908.1\|2296192_2296717_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_003223910.1\|2296730_2297105_-	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA
WP_003223915.1\|2297217_2297682_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.5e-44	60.0
WP_003223917.1\|2297714_2298911_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	9.0e-115	54.7
WP_003223919.1\|2298925_2299573_-	riboflavin synthase subunit alpha	A0A2H4PQS5	Staphylococcus_phage	3.2e-42	45.4
WP_003223921.1\|2299583_2300669_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	4.6e-57	36.6

DBSCAN-SWA_6

2937415 : 2988974

Staphylococcus_phage(30.0%)

holin,coat,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_113737815.1\|2937415_2938566_-\|transposase	IS3-like element ISBsu1 family transposase	A0A0N9SIX5	Staphylococcus_phage	1.0e-38	61.9
WP_003219367.1\|2938676_2939153_-	nucleoside triphosphatase YtkD	NA	NA	NA	NA
WP_003219365.1\|2939364_2939769_-\|holin	holin family protein	NA	NA	NA	NA
WP_079996439.1\|2939749_2939938_+	hypothetical protein	NA	NA	NA	NA
WP_003219364.1\|2939934_2940372_-	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	2.2e-47	61.4
WP_072181969.1\|2940467_2940644_+	YtzI protein	NA	NA	NA	NA
WP_003219362.1\|2940637_2941078_-	FixH family protein	NA	NA	NA	NA
WP_003219361.1\|2941197_2941671_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_003219349.1\|2941798_2942026_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	1.4e-24	70.3
WP_003219348.1\|2942022_2942586_-	carbonic anhydrase	NA	NA	NA	NA
WP_003219346.1\|2942704_2942953_-	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_003219340.1\|2943158_2944490_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_003219339.1\|2944532_2945573_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_003219337.1\|2945626_2945785_+	DUF1540 domain-containing protein	NA	NA	NA	NA
WP_003219335.1\|2945803_2946691_-	manganese ABC transporter permease MntD	NA	NA	NA	NA
WP_032727293.1\|2946680_2947988_-	metal ABC transporter permease	NA	NA	NA	NA
WP_003219331.1\|2947993_2948746_-	manganese ABC transporter ATP-binding protein MntB	A0A1V0SE00	Indivirus	3.0e-15	26.1
WP_003219328.1\|2948764_2949685_-	manganese ABC transporter substrate-binding protein/adhesin MntA	NA	NA	NA	NA
WP_003219326.1\|2949965_2951081_-	o-succinylbenzoate synthase	NA	NA	NA	NA
WP_003219324.1\|2951077_2952538_-	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	6.3e-78	33.5
WP_003219322.1\|2952628_2953447_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_003219320.1\|2953460_2954309_-	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA
WP_003219317.1\|2954296_2956039_-	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA
WP_003219315.1\|2956035_2957451_-	isochorismate synthase MenF	NA	NA	NA	NA
WP_003219313.1\|2957742_2958462_+	yteA family sporulation protein	NA	NA	NA	NA
WP_003219310.1\|2958485_2959289_-	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	2.1e-51	44.1
WP_003219306.1\|2959460_2960747_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	2.3e-71	36.1
WP_003219304.1\|2960743_2961694_+	NAD-dependent epimerase/dehydratase family protein	A0A1V0SAI6	Catovirus	4.2e-30	30.2
WP_032727292.1\|2961696_2962920_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_003219299.1\|2962996_2963419_-	hypothetical protein	NA	NA	NA	NA
WP_003219297.1\|2963420_2964476_-\|coat	spore coat protein CotS	NA	NA	NA	NA
WP_003219296.1\|2964490_2965624_-\|coat	spore coat protein CotSA	NA	NA	NA	NA
WP_079996441.1\|2965813_2966887_+\|coat	spore coat kinase CotI	NA	NA	NA	NA
WP_003219290.1\|2966978_2967446_+	TspO/MBR family protein	NA	NA	NA	NA
WP_003219288.1\|2967474_2969871_-	glycogen/starch/alpha-glucan phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	2.6e-12	39.2
WP_003219286.1\|2969857_2971312_-	glycogen synthase GlgA	NA	NA	NA	NA
WP_003219283.1\|2971308_2972340_-	glucose-1-phosphate adenylyltransferase subunit GlgD	NA	NA	NA	NA
WP_003219281.1\|2972362_2973505_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_003219279.1\|2973501_2975385_-	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA
WP_013308037.1\|2983192_2983771_+	energy-coupled thiamine transporter ThiT	NA	NA	NA	NA
WP_003222724.1\|2983812_2984334_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003222726.1\|2984358_2985888_-	flotillin lipid rafts scaffold protein FloT	A0A2I2L4B2	Orpheovirus	2.7e-07	27.5
WP_003222729.1\|2985908_2986433_-	hypothetical protein	NA	NA	NA	NA
WP_003222731.1\|2986602_2987091_+	DinB family protein	NA	NA	NA	NA
WP_003222733.1\|2987096_2987678_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_003222735.1\|2987765_2988974_-\|holin	choline dehydrogenase	NA	NA	NA	NA

DBSCAN-SWA_7

3280937 : 3288790

Organic_Lake_phycodnavirus(33.33%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003220066.1\|3280937_3281609_-\|holin	choline ABC transporter permease OpuBD	NA	NA	NA	NA
WP_003220068.1\|3281625_3282546_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003220070.1\|3282557_3283211_-\|holin	choline ABC transporter permease OpuBB	NA	NA	NA	NA
WP_003220072.1\|3283225_3284371_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	1.6e-15	32.7
WP_003220076.1\|3284655_3285189_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
WP_138920936.1\|3285248_3286399_-\|transposase	IS3 family transposase	A0A0N9SIX5	Staphylococcus_phage	1.3e-38	61.2
WP_003219981.1\|3286513_3287188_-\|holin	glycine betaine/carnitine/choline/choline sulfate ABC transporter permease OpuCD	G3M9Y4	Bacillus_virus	7.3e-05	25.6
WP_003219979.1\|3287205_3288123_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003219978.1\|3288136_3288790_-\|holin	glycine betaine/carnitine/choline/choline sulfate ABC transporter permease OpuCB	NA	NA	NA	NA

DBSCAN-SWA_8

3661219 : 3757046

100

Bacillus_phage(26.67%)

bacteriocin,lysis,tRNA,protease,holin,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003221993.1\|3661219_3662890_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_003221995.1\|3662886_3663315_-	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_003222002.1\|3663628_3663760_+\|bacteriocin	subtilosin A family bacteriocin	NA	NA	NA	NA
WP_003222004.1\|3663904_3665251_+	subtilosin maturase AlbA	NA	NA	NA	NA
WP_003222006.1\|3665263_3665425_+\|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbB	NA	NA	NA	NA
WP_003222008.1\|3665421_3666141_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-19	28.1
WP_003222009.1\|3666133_3667444_+\|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbD	NA	NA	NA	NA
WP_079996665.1\|3667433_3668594_+	insulinase family protein	NA	NA	NA	NA
WP_003222013.1\|3668598_3669882_+	insulinase family protein	NA	NA	NA	NA
WP_003222015.1\|3669878_3670580_+\|bacteriocin	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	NA	NA	NA	NA
WP_003222017.1\|3670716_3672072_-	YncE family protein	NA	NA	NA	NA
WP_003222019.1\|3672068_3672296_-	hypothetical protein	NA	NA	NA	NA
WP_003222022.1\|3672298_3673444_+	response regulator aspartate phosphatase RapF	A0A1P8CWN8	Bacillus_phage	1.0e-78	44.0
WP_003222023.1\|3673427_3673547_+	phosphatase RapF inhibitor PhrF	NA	NA	NA	NA
WP_003222025.1\|3673699_3674572_-	agmatinase	NA	NA	NA	NA
WP_003222027.1\|3674632_3675463_-	spermidine synthase	NA	NA	NA	NA
WP_003222029.1\|3675664_3677740_+	penicillin-binding protein	NA	NA	NA	NA
WP_003222031.1\|3677678_3677924_-	hypothetical protein	NA	NA	NA	NA
WP_003222033.1\|3678060_3678579_-	hypothetical protein	NA	NA	NA	NA
WP_003222035.1\|3678591_3679251_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_003222038.1\|3679359_3679548_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_003222040.1\|3679591_3680011_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003222042.1\|3680130_3682047_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.8e-141	42.4
WP_032727277.1\|3682655_3682811_-	hypothetical protein	NA	NA	NA	NA
WP_003222046.1\|3682949_3683450_-	YwgA family protein	NA	NA	NA	NA
WP_003222047.1\|3683485_3684787_-	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	5.5e-25	28.9
WP_003222050.1\|3684948_3685173_-	DUF1450 domain-containing protein	NA	NA	NA	NA
WP_003222052.1\|3685387_3686173_+	prespore-specific transcription regulator RsfA	A0A1D6X8E5	Bacillus_phage	7.7e-06	50.0
WP_003222054.1\|3686316_3687207_-	DMT family transporter	NA	NA	NA	NA
WP_003222057.1\|3687375_3688221_-	octanoyl-[GcvH]:protein N-octanoyltransferase	NA	NA	NA	NA
WP_003222059.1\|3688268_3689168_-	cysJI operon transcriptional regulator CysL	A0A2H4J8I9	uncultured_Caudovirales_phage	3.6e-07	42.5
WP_003222061.1\|3689314_3690286_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_003222063.1\|3690555_3691320_+	heme-dependent peroxidase	NA	NA	NA	NA
WP_003222065.1\|3691452_3692232_+	NADPH-dependent reductase BacG	NA	NA	NA	NA
WP_003222068.1\|3692246_3693446_-	transaminase BacF	NA	NA	NA	NA
WP_032727276.1\|3693446_3694631_-	bacilysin exporter BacE	NA	NA	NA	NA
WP_003222079.1\|3694627_3696046_-	alanine--anticapsin ligase	NA	NA	NA	NA
WP_003222081.1\|3696064_3696826_-	dihydroanticapsin 7-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	8.8e-23	32.0
WP_003222084.1\|3696828_3697536_-	3-((4R)-4-hydroxycyclohexa-1, 5-dien-1-yl)-2-oxopropanoate isomerase	NA	NA	NA	NA
WP_003222086.1\|3697525_3698140_-	prephenate decarboxylase	NA	NA	NA	NA
WP_003222088.1\|3698292_3699531_-	MFS transporter	NA	NA	NA	NA
WP_003222090.1\|3699747_3701160_-	amino acid permease	NA	NA	NA	NA
WP_003222092.1\|3701159_3702860_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_003222094.1\|3702932_3704480_-	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_003222096.1\|3704718_3705993_-	glutamate dehydrogenase	NA	NA	NA	NA
WP_003222098.1\|3706166_3706631_-	biofilm-surface layer protein BslB	NA	NA	NA	NA
WP_003222100.1\|3706955_3707411_-\|coat	spore coat protein	NA	NA	NA	NA
WP_003222102.1\|3707403_3708255_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	8.9e-40	39.3
WP_003222104.1\|3708268_3709216_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.0e-72	44.4
WP_003222106.1\|3709215_3709956_-	NTP transferase domain-containing protein	I7I009	Enterobacteria_phage	1.7e-47	41.5
WP_003222108.1\|3709980_3711000_-\|coat	spore coat protein	NA	NA	NA	NA
WP_003222110.1\|3711002_3711725_-\|coat	spore coat protein	NA	NA	NA	NA
WP_003222112.1\|3711717_3712839_-\|coat	spore coat protein	NA	NA	NA	NA
WP_003222114.1\|3712838_3713708_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003222116.1\|3713708_3714878_-	DegT/DnrJ/EryC1/StrS aminotransferase family protein	A0A1D8KU11	Synechococcus_phage	1.0e-14	25.3
WP_003222118.1\|3714898_3716323_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA
WP_003222120.1\|3716327_3717098_-\|coat	spore coat dTDP-glycosyltransferase SpsA	A0A0F7L2F7	uncultured_marine_virus	3.4e-06	28.6
WP_032727274.1\|3717063_3717270_-	hypothetical protein	NA	NA	NA	NA
WP_003222122.1\|3717417_3717963_+\|coat	spore coat protein GerQ	NA	NA	NA	NA
WP_003222123.1\|3718006_3718378_-	DUF423 domain-containing protein	NA	NA	NA	NA
WP_003222125.1\|3718439_3719762_-	purine permease	NA	NA	NA	NA
WP_003222126.1\|3719780_3720098_-	YwdI family protein	NA	NA	NA	NA
WP_003222131.1\|3720265_3721636_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_003222133.1\|3721661_3722339_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	9.2e-48	46.6
WP_003222135.1\|3722352_3723159_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_003222137.1\|3723248_3723782_-	hypothetical protein	NA	NA	NA	NA
WP_003222138.1\|3723829_3724465_-	hypothetical protein	NA	NA	NA	NA
WP_003222139.1\|3724457_3724796_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_003222141.1\|3724939_3725755_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_003222143.1\|3725843_3726092_-	hypothetical protein	NA	NA	NA	NA
WP_003222146.1\|3726184_3727624_-	sucrose-6-phosphate hydrolase	S6ATV4	Bacillus_phage	1.6e-20	26.7
WP_003222147.1\|3727620_3729006_-	PTS system sucrose transporter subunit IIBC	NA	NA	NA	NA
WP_003222150.1\|3729306_3730077_+	formate/nitrite transporter family protein	NA	NA	NA	NA
WP_003222152.1\|3730115_3730946_-	sac operon transcriptional antiterminator SacT	NA	NA	NA	NA
WP_003222155.1\|3730985_3731288_-	hypothetical protein	NA	NA	NA	NA
WP_003222157.1\|3731816_3734237_+\|protease	serine protease Vpr	A0A217EQY2	Bacillus_phage	2.0e-20	38.2
WP_003222159.1\|3734274_3735276_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_003222161.1\|3735451_3736201_-	oxygen-insensitive NADPH nitroreductase	NA	NA	NA	NA
WP_032727272.1\|3736306_3737491_-	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA
WP_003227411.1\|3739070_3739334_+	spore morphogenesis/germination protein YwcE	NA	NA	NA	NA
WP_003222169.1\|3739574_3739949_-	cytochrome aa3 quinol oxidase subunit IV	NA	NA	NA	NA
WP_003222171.1\|3739950_3740565_-	cytochrome aa3 quinol oxidase subunit III	NA	NA	NA	NA
WP_003222173.1\|3740578_3742528_-	cytochrome aa3 quinol oxidase subunit I	NA	NA	NA	NA
WP_079996670.1\|3742555_3743521_-	cytochrome aa3 quinol oxidase subunit II	NA	NA	NA	NA
WP_003222176.1\|3744034_3744280_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_003222177.1\|3744349_3745891_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA
WP_003222180.1\|3745894_3747067_-	galactokinase	NA	NA	NA	NA
WP_032727269.1\|3747151_3747535_-	GtrA family protein	NA	NA	NA	NA
WP_003222184.1\|3747552_3748224_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003222186.1\|3748576_3748735_+	DNA-binding anti-repressor SinI	NA	NA	NA	NA
WP_003222190.1\|3749174_3749483_+	DUF485 domain-containing protein	NA	NA	NA	NA
WP_003222192.1\|3749479_3751021_+	cation acetate symporter	NA	NA	NA	NA
WP_003222194.1\|3751053_3751653_-	DsbA family protein	NA	NA	NA	NA
WP_003222196.1\|3751741_3752992_-	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA
WP_003222198.1\|3753010_3753349_-	hypothetical protein	NA	NA	NA	NA
WP_003222200.1\|3753504_3754167_-	thiamine phosphate synthase	NA	NA	NA	NA
WP_003222202.1\|3754163_3754982_-	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_003222204.1\|3754989_3755895_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003222205.1\|3756000_3756387_+\|holin	CidA/LrgA family holin-like protein	NA	NA	NA	NA
WP_003222208.1\|3756368_3757046_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP034943

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection