CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP040892	Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_4, complete sequence	0 crisprs	NA	4
NZ_CP040894	Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_3, complete sequence	0 crisprs	RT	1
NZ_CP040893	Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_2, complete sequence	0 crisprs	NA	3
NZ_CP040890	Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_6, complete sequence	0 crisprs	NA	0
NZ_CP040889	Leclercia adecarboxylata strain Z96-1 chromosome, complete genome	2 crisprs	WYL,DEDDh,cas3,RT,DinG,csa3	5
NZ_CP040895	Leclercia adecarboxylata strain Z96-1 plasmid pIMP-Z96-1, complete sequence	0 crisprs	RT	1
NZ_CP040891	Leclercia adecarboxylata strain Z96-1 plasmid pMCR-Z96-1, complete sequence	0 crisprs	NA	0
NZ_CP040888	Leclercia adecarboxylata strain Z96-1 plasmid pZ96-1_1, complete sequence	0 crisprs	RT,csa3	3

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 4478

Enterobacteria_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_117242818.1\|660_1896_+	hypothetical protein	NA	NA	NA	NA
WP_001549947.1\|1948_3052_+	ring-opening amidohydrolase	NA	NA	NA	NA
WP_100160450.1\|3167_4478_+	purine permease	Q9KX94	Enterobacteria_phage	4.4e-30	27.2

DBSCAN-SWA_2

11535 : 12516

Escherichia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_119735251.1\|11535_12516_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	99.1

DBSCAN-SWA_3

17588 : 22497

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044715191.1\|17588_19910_-	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	4.1e-39	26.6
WP_050886235.1\|19911_20568_-	hypothetical protein	NA	NA	NA	NA
WP_044715189.1\|20570_21227_-	hypothetical protein	NA	NA	NA	NA
WP_044715185.1\|21238_22012_-	hypothetical protein	NA	NA	NA	NA
WP_044715183.1\|22026_22497_-	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	1.6e-19	40.0

DBSCAN-SWA_4

46087 : 47734

Burkholderia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044715119.1\|46087_46750_-	P-loop NTPase	E5FFJ3	Burkholderia_phage	6.5e-06	25.1
WP_024262784.1\|47086_47734_+	recombinase family protein	M9Q1K0	Clostridium_phage	6.1e-09	29.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP040894

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8731 : 40491

Salmonella_phage(25.0%)

integrase,transposase

attL 33818:33833|attR 48824:48839

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000427623.1\|8731_9736_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_047721423.1\|11187_12312_-	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
WP_004118036.1\|12323_12593_-	metal-sensing transcriptional repressor	NA	NA	NA	NA
WP_004118039.1\|12765_13455_-	hypothetical protein	NA	NA	NA	NA
WP_047721424.1\|13468_14206_-	HupE/UreJ family protein	NA	NA	NA	NA
WP_004118043.1\|14250_14634_-	hypothetical protein	NA	NA	NA	NA
WP_045270074.1\|14781_15423_-	recombinase family protein	NA	NA	NA	NA
WP_139565654.1\|15590_18578_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.4e-297	53.7
WP_000427623.1\|18656_19661_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_139565655.1\|19905_20118_+	hypothetical protein	NA	NA	NA	NA
WP_058663152.1\|21268_21763_+	hypothetical protein	NA	NA	NA	NA
WP_139565656.1\|21999_24702_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_072207057.1\|26427_26736_-	hypothetical protein	NA	NA	NA	NA
WP_109873927.1\|27127_28813_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	6.9e-161	52.8
WP_139565657.1\|29416_29659_-	Hok/Gef family protein	NA	NA	NA	NA
WP_139565658.1\|29874_30237_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	8.9e-42	70.0
WP_139565659.1\|31212_31830_+	ParA family protein	D4HTX7	Vibrio_phage	3.9e-21	35.3
WP_117087790.1\|31882_32122_+	DNA partition complex ParG	NA	NA	NA	NA
WP_139565660.1\|32644_33517_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	2.1e-65	46.0
WP_139565661.1\|33803_34571_-\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	2.4e-28	60.8
33818:33833	attL	NA	NA	NA	NA
WP_139565662.1\|34989_35769_-\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	3.0e-50	88.4
WP_111969899.1\|35765_36587_-	hypothetical protein	NA	NA	NA	NA
WP_007374408.1\|37865_38774_+	HNH endonuclease	NA	NA	NA	NA
WP_088569307.1\|39404_40491_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.4e-45	39.2
48824:48839	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP040889

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP040889_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040889_1

870786-870864

Orphan

Consensus_repeat	Method
GCCGGGGGCGCTTCGCTTGCCCGGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040889_1

>merge|NZ_CP040889|1|870786-870864|CRISPRCasFinder
GCCGGGGGCGCTTCGCTTGCCCGGCCTGGAAGGTCTGAGGATGATGCCTAACGCCGGGGGCGCTTCGCTTGCCCGGCCT

>NZ_CP040889|1|1|870786-870864|CRISPRCasFinder
GCCGGGGGCGCTTCGCTTGCCCGGCCT	GGAAGGTCTGAGGATGATGCCTAAC
GCCGGGGGCGCTTCGCTTGCCCGGCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040889.1\|WP_139563465.1\|872469_875247_+\|BapA-prefix-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|375438
NZ_CP040889.1\|WP_139563463.1\|869439_870774_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP040889.1\|WP_139565423.1\|896007_897177_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP040889.1\|WP_052246187.1\|867682_869443_+\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|226969
NZ_CP040889.1\|WP_139563464.1\|871193_871754_+\|YceI-family-protein	unknown	unknown	gnl\|CDD\|377274
NZ_CP040889.1\|WP_139563456.1\|854932_855847_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP040889.1\|WP_138371028.1\|860461_861247_-\|transcriptional-regulator-NanR	unknown	unknown	gnl\|CDD\|235166
NZ_CP040889.1\|WP_139565424.1\|898891_899587_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040889.1\|WP_139563468.1\|897469_898177_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040889.1\|WP_139563461.1\|859437_860337_-\|N-acetylneuraminate-lyase	unknown	unknown	gnl\|CDD\|179749
NZ_CP040889.1\|WP_039030048.1\|892407_893808_+\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP040889.1\|WP_139563459.1\|857151_857841_-\|putative-N-acetylmannosamine-6-phosphate-2-epimerase	unknown	unknown	gnl\|CDD\|225555
NZ_CP040889.1\|WP_139563462.1\|862203_867630_+\|heme-peroxidase	unknown	unknown	gnl\|CDD\|188653
NZ_CP040889.1\|WP_139563460.1\|857859_859350_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|179668
NZ_CP040889.1\|WP_139563467.1\|893804_895997_+\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|274550
NZ_CP040889.1\|WP_139563466.1\|876142_892330_+\|BapA-prefix-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|375438
NZ_CP040889.1\|WP_139563458.1\|856279_857155_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|235338
NZ_CP040889.1\|WP_139563470.1\|899590_900286_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040889.1\|WP_139563469.1\|898180_898888_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040889.1\|WP_139563457.1\|855800_856283_-\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345

Protein	Function_ID	Function_description	E-value
NZ_CP040889.1\|WP_139563465.1\|872469_875247_+\|BapA-prefix-like-domain-containing-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.53855e-23
NZ_CP040889.1\|WP_139563463.1\|869439_870774_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	2.99677e-101
NZ_CP040889.1\|WP_139565423.1\|896007_897177_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	2.87041e-101
NZ_CP040889.1\|WP_052246187.1\|867682_869443_+\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|226969	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only].	0
NZ_CP040889.1\|WP_139563464.1\|871193_871754_+\|YceI-family-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	4.99185e-32
NZ_CP040889.1\|WP_139563456.1\|854932_855847_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.341e-64
NZ_CP040889.1\|WP_138371028.1\|860461_861247_-\|transcriptional-regulator-NanR	gnl\|CDD\|235166	PRK03837, PRK03837, transcriptional regulator NanR; Provisional.	5.49696e-128
NZ_CP040889.1\|WP_139563461.1\|859437_860337_-\|N-acetylneuraminate-lyase	gnl\|CDD\|179749	PRK04147, PRK04147, N-acetylneuraminate lyase; Provisional.	4.4235e-178
NZ_CP040889.1\|WP_039030048.1\|892407_893808_+\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	4.59104e-97
NZ_CP040889.1\|WP_139563459.1\|857151_857841_-\|putative-N-acetylmannosamine-6-phosphate-2-epimerase	gnl\|CDD\|225555	COG3010, NanE, Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism].	1.99367e-125
NZ_CP040889.1\|WP_139563462.1\|862203_867630_+\|heme-peroxidase	gnl\|CDD\|188653	cd09821, An_peroxidase_bacterial_2, Uncharacterized bacterial family of heme peroxidases. Animal heme peroxidases are diverse family of enzymes which are not restricted to metazoans; members are also found in fungi, and plants, and in bacteria - like this family of uncharacterized proteins.	0
NZ_CP040889.1\|WP_139563460.1\|857859_859350_-\|MFS-transporter	gnl\|CDD\|179668	PRK03893, PRK03893, putative sialic acid transporter; Provisional.	0
NZ_CP040889.1\|WP_139563467.1\|893804_895997_+\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|274550	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP040889.1\|WP_139563466.1\|876142_892330_+\|BapA-prefix-like-domain-containing-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.96659e-18
NZ_CP040889.1\|WP_139563458.1\|856279_857155_-\|ROK-family-protein	gnl\|CDD\|235338	PRK05082, PRK05082, N-acetylmannosamine kinase; Provisional.	9.44412e-168
NZ_CP040889.1\|WP_139563457.1\|855800_856283_-\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	7.3253e-54

>NZ_CP040889.1|WP_139563463.1|869439_870774_+|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MKNDNKSSAMPDAEIVDINIWPPLIRGLAVIIIAVGGFLLWAVKAPLDAGVVADGTVTVSSNRKTIQHLSGGRVTDIYMKEGEVVKKNQVLMRLDTLQLDMRYSALSAQYISAKTSEDRLLAERNGDDTITFSDGLVKNFAGNKRLAESQQLQAKLFETRRKNIQDELSMIDESLDGLVGQTENLNKIKGYREHQFTLINKELGAIRALSEKNYYPKAQLMVLEREAAEISSTVSEDILNIAKLKSQQNELRIKAYQVQHQYLREVESELTLKQKEVAMLEDELQSTRHELDNTVIRSPIDGVVLDVKVSTVGGVIQPGEHLMDIVAAGQPLQIDAKIPVQAIDKMAPGLTVDVMFPALNHALLPTVPARVLTVSADRLTDKVTQQPYYLAEVQVSPEGVRLLRDHKIKAGMPASVTIKTGERTFLSYLFKPLMARLELAFKEI
>NZ_CP040889.1|WP_052246187.1|867682_869443_+|type-I-secretion-system-permease/ATPase
MPRQYKSTELKNALRGTRPAFITLLFFGSVINMLMLAPAIYMLQVYDRVLASQNTTTLLMLTLLIVGLYVVIGMIEFARSSVMTRLGNRLDVKLNQLVFNAAFKRKIATGDNNPAQALNELAQIRQILSGNSLFALLDIPWTPFYLLVAFLVHPLLGYLSLGGILILLCLTVLTELSTKTPIQQAHMLSVSNSIILNKQLQNSDTIEAMGMLATLKNHWLEGHSKVMVLQTRIADKSAVYSSLSRFVRVLLQSISLGAGALLVIAGEITPGLMIAASIILGRVLSPVEQIIGSWKQFVQFRSAWKQLTKLLEEYPAPKANLTLPTPKGIISVEGIFAAPPGQKIATLRNVSFQLEQGEVLGIIGPSASGKSSLAKLLVGVWHPLSGKVRLDGADICQWDKNLLGPSMGYLPQDVELFDGSIAQNIARFGPADSELIVAAAQLAGVHEMILRLPQGYDTPLGASGHQLSGGQRQRIGLARAVYNNPAFIVLDEPNANLDDAGEMALIKAITVLRERGQTVVLISHRPTLLGVVNKVLLINEGAVQAFGPREQVFANLRQANMLKSVPVAPAAEGQPETQQPPREALS
>NZ_CP040889.1|WP_139563462.1|862203_867630_+|heme-peroxidase
MAEQYDFTVTLHDLEFILKQIKISESATKADGTIDGDALRDAVGDPLLPYGIRTVDGSWNNLIPGQEMYGSADQNMPRLVPLDLEAIKNDPELAKYLTASGPNSMVTDSDPRTISNIISDQTASNPAAVEAAEGLKDAPGGGTSENGSLSIPNLSPDVGLSPAFNGWMTFFGQFFDHGLDLIPKEGNGIVFIPLMPDDPLYVPGSPTNFMLLTRAKVDATHNTVNTTTPWIDQNQTYTSHPSHQIFLREYTFIDGKPEPTGHLLDGVHGMATWGEVKAHALQFLGIQLTDADIFNVPLLATDRYGNLMLSASGKVQIVTAHGLVEADGGRLPPDTLRTGHAFLDDIAHTAVPKLDANGNLLADTNDVIGGAPEAGTYDNELLDRHFITGDGRGNENIGLTAVHSVFHDEHNRLVEQYKATILGSGDISVINQWLMPNHQITEIPADTSTLVWNGEYLFQAGRFTTEMEYQHLVFEEFARTVQPAVDPFVFSNTADINPAIFAEFAHVVYRFGHSMLTETVDRTTFDMQSDDLGLIQAFLNPLAFDNNGSLDNQAAIGAIVRGMTRQVGNEIDEFLTGALRNNLVGLPLDLGALNIARGRDTFMPTLNQAREQFFTLTGNSELKPYESWADFAANLKNTASILNFMAAYGQHQLILNATTIAEKRAAVEFLLFGPADDATRADAFDFFNSTGAWATKESGLNMVDFWIGGLAERKMEFGGMLGSTFNFVFETQMEMLQDGDRFYYLSRTQGLNMLNQLEANSFAALVMRNSDLGDEGSSHVHAKLFMTPDHVLEVNTGVQLGADPKWGNALKDLLTPLVIRKAAGADVDGDGKADGAYLKYSGPGHVVLGGSAGNDTLIGGLGIDSLWGDGGNDRLDGGDEADTVHGGDGDDIITDTGTPVGGADFLHGDAGNDVIFSGNGNDLSFGGSGQDFIVVGEDAQEVFGGLDNDFILGGSGGDALLGNEGDDWIEGGDGFDSLTGENSELFFNSTIVGHDVLNGQGNDTDYDGEAGDDIMVQGAGIQRNNGMAGFDWAIHKGDVVGANSDLGIPIFVNQQEFILRDRFDLVEGLSGWKFDDVLTGTDQPVGTAPVQGTPLSNNLTLEGVARINGLDKVVGSTLINGAVDGVVLNPDNGADILLGGGGSDRIMGKAGDDIIDGDAWLNVRIEVRDKLDPTKVIKSVDSMNELKAEMLNGTLNPGQLHIVREILYDGNKGETDVALYRDVNGNYNFTRNVDGSLTVNHATVSANLPLGDGTDRLLNIEQLEFGDGVKLKVAAEKATGNVNISSQAPGVGDLLRVNTVDLLDANGLADNLPITYTWQALINGEWRDQATGTEFRVGNGLAGRQLRVTASFTDRMGDAESLVSAVTSAVGPRDQPTQGVPVISDLTPTRTLALTADVSGITDGDGLTNGNNFRYQWQVSLGLGFVNIAGATAATYTPTQAMVEQRLRVIVTVTDDEGNPSVTLTSAPTQAVGNMLVGTNGANTLFGTAGSDYIDGGAGNDTLFGLAGDDVLIGGTGNDALDGGAGADQMTGGVGNDTYYVDDAGDVIIEGVNEGTDSVNVTAASYVMGNNLENLTYTGTGNFNGTGNALANTMTGGRGNDTLNGMDGDDTLFGLAGNDTLIGGNGNDGIDGGQGADAMTGGLGNDTYTVDNAGDTVVEGANGGNDAVRTTLTTYTLAENVEVLSFTGIGGFNATGNAQANTITGGTGVDRINGGGGNDTLTGNGGNDVFAFGASFGQDVITDFDSNAAGGQDFINLAGRGLTAGNYLNSISVTASGTSTVLNFASGERITLMNTTVSAITATDFQFS
>NZ_CP040889.1|WP_138371028.1|860461_861247_-|transcriptional-regulator-NanR
MTLSSEKQTEISSETIGRTLRRRPLARKKLSEMVEEELEQMIRRREFAEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQIQNGERARISRPSADTIISELSGMAKDFLAHPGGIAHFEQLRLFFESSLVRHAAQHASDEQIALLEKALELNSQSLDDNALFIRSDVEFHRVLAEIPNNPIFMSIHVALIDWLIAARPAVPEQALHEHNNTSYQQHIAIFNAIRSRDPDAAEQALQAHLTSVFATWHAFEQGKKRRK
>NZ_CP040889.1|WP_139563461.1|859437_860337_-|N-acetylneuraminate-lyase
MSVTLKGVMPALLTPFDRQQKLDTQSLRQLVRFNIAQGIDGLYVGGSTGEAFVQNSAERQEVLEIVAEEAKGKVTLIAHVGTVSTHESQQLAQVASRFGYDAVSAVTPFYYPFSFEEHCDHYRGIIDSADGLPMVVYNIPALSGVKLSLDQINTLVTLPGVGALKQTSGDLFQMEQIRRAHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIATASALQTKCNEVIDLLIKVGVFRGLKTVLHYMDVIDVPLCRKPFSPVDEKYLPELRALAQLLQQEQEQQ
>NZ_CP040889.1|WP_139563460.1|857859_859350_-|MFS-transporter
MNTMTQNVPWYRCLNRQQWRAFSAAWVGYVLDGFDFVLIALVLTDIKTEFGLTTLHAASLISAAFISRWFGGLVLGAMGDRYGRRLAMVSSIVLFSVGTLACGLAQGYTTMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVAAQVYSLVVPEWGWRALFFIGILPIVFALWLRKNIPEAEDWKEKQQSNTPVKTMVDILYRGEHRFINIAMTLVAAVSLWFCFAGQLESAAIVAILGLLCAGIFISFMVQSSGKRWPTGVTLMVVVLFAFLYSWPIQALLPTYLKTDLAYDPATVAQVLFFSGFGAAAGCCAGGFLGDWLGTRKAYVCSLLASQLLIVPVFTIGGSSVWVLGLLLFFQQMLGQGISGILPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPVLGAFIAQRLDLGTALCSLSFGLTFVVILLIGFDMPSRVQRWLHPEALRTHDAIDGKPFSGAIIAGDKASQLARHKG
>NZ_CP040889.1|WP_139563459.1|857151_857841_-|putative-N-acetylmannosamine-6-phosphate-2-epimerase
MSFLDELDANVKARGGLIVSCQPVPNSPLDKPEIVAAMALAAEQAGAVGLRIEGIENLRAVRAVVSVPVIGIVKRDLPDTPVRITPWLEDVDALAEAGASIIAFDGTQRPRPVPVEALLARIRHHQLIAMADCSSEQDGLYCRQLGVELIGTTLSGYTSDVTPVEPDLALVSTLSQAGCRVVAEGRYNSPELAAQAIEHGAWAVTVGSAITRLEHICQWYRDALQGATK
>NZ_CP040889.1|WP_139563458.1|856279_857155_-|ROK-family-protein
MITLAMDIGGTKLAAALVDSELKIIERREIPTPASKTPDALEAAMSELVTPLYPRAQHFAVASTGIIQEGVLTSINPANLGGLSHFPLVKYLSALTGLPGVALNDAQAAALAEYQHMPHAVRDMVFITVSTGVGGGVVHNGKLVTGSGGLTGHCGHTLADPNGPRCGCGRIGCVEAIASGRGIAAAAEGELCGLDAKAIFAHAAEGHAQAVALIARSARTLARLIADLKALTDCQRVVIGGSIGLADGYLSQVQHYLAQEPGVYQTELCSARHRGDAGLLGAALWAKGAWQ
>NZ_CP040889.1|WP_139563457.1|855800_856283_-|YhcH/YjgK/YiaL-family-protein
MILGDINRMQAAGLSAVFCQAIDQVLSAGLSQLAPGSYPLQGEEMWVNVMQFATQRAEEKRAELHRAYIDIQILLEGEEHIYFGLAGSARDCDEWHEEEDYQLCDRIEHQQSVTLKPGMFAIFMPGEPHKPGCFTTHPGTVKKAVIKLHHRALTDLHSTL
>NZ_CP040889.1|WP_139563456.1|854932_855847_+|LysR-family-transcriptional-regulator
MFRLEDLLLFVRVSALSSFSDAAREAGVQPAQVSSAIKRLESSLGIRLFARSTRSLRLTPEGEAWLPYARQMLDAMYAGMQKIRAPEEEISGTLQIAVPSDLGRHLLLPVFQAFDQRYPALRLRIFFSDQVADVFKDPVDIAFRYGTPEDASYISLPVAPDNRRVLVASPEWVARHGEPSHPDELSRVNALTFVLRGRLHDRWTFFRDGETHSVSVSGTMMSDDAEVIRRLAVSGAGVAYKSRLDVAEDLRAGRLQILMKGYEGESVPLNMICPHRKQLSAGVRLLYEAVKACCEGQSAHDDVI
>NZ_CP040889.1|WP_139563464.1|871193_871754_+|YceI-family-protein
MLRLVLLLVVTLVCPSLYAAPLVYTIDTQKTAIKLSWRAFGGIPSWANLNGVTGTVTLNPDNEFDDRIQVTVPVATLKASNNLLTWQLKSNMFFDAARYPTITFSSTRVVKLKEDHYRAFGTLTVRDLSRPVILEATLDPLPGEAIALHATTAISRSAYKMDRFALVVDDRIAIAIDIQAKPSRAL
>NZ_CP040889.1|WP_139563465.1|872469_875247_+|BapA-prefix-like-domain-containing-protein
MSKFTVISRLTHQETVAEGNQIVLGEDSVIKLQAGRGDIASYSRSNNDLLVRMTNGETVTLKNYYVNNHKLVLDENGALWWIDDPLAVERYQSIPSTDALIAGNVSNSSSDTPIWPWVLGGVAAAGGIALAAGGGGGGGGGGGSDRIDPGPAVLDTTPPGAPTNLHFANGNTQLLGSAEANSTVTITDASGNVVGKAKTNGNGEFTVELGTPYTNGETLTAKATDGSGNVSPPTSITAADTTAPDAPMIIIADDDVGSITGALNSGATTDDPRPVFSGSGEAGSTITLYDNGKNIGSTVVNSDGSWTFTPTSDLAEGLHQITASATDPAGNTGPDSEDFILTIDTIAPDAPVLQVMDSVGNIQGFVTSGGFTDATQPVLSGTGDPGSTITLYHNELLLAEIIVPDNGSWSYTPVEPLIEGEHSFTLTETDVAGNLSPTSAPFEFTVDRTPPAAPSGLAINATGTILTGSAEPNSTVTVTNNLGESLGTATADVNGAFTLTLTTPQTNGETLSAVATDRAGNEGPEAPLIVPDTTAPAAPTALVVAETGDSVSGEAEANARISIRDATGQEIGTGTVEADGKFTVNISPNQLNGEVLTVYAFDTANNQSPPAQATANDSTPPAPPAGLDVSDDGLALTGTAEAGSTVVIMEGTNKLGEVVVSETGSFSFTLPVAKLNGEIMSLTATDHAGNTSDPSTVEADDITPPATPIITNVADNVPDITGTVVSGTLTDDRTPLISGTGEIGTKIFVYSEAIQIGMTEVDSSGNWSFQVPASLTDGIHSLTADAVDRRGNHSLISETWTIDVDPAAPNPPTTTTTAAAFALNAEPTGETLIYNVLSDNGGDHVSNFSLAEGDKIDISQLLVGWNGDRGTLGEYLQVNSSDGNTVISIDRDGTGTSYAPATLVTLDDVQTTYEELVNQNHIITG
>NZ_CP040889.1|WP_139563466.1|876142_892330_+|BapA-prefix-like-domain-containing-protein
MSKITVISKLTHVETVTDGSQVTLNDSSIVKINAERADILEYNRNGNDLIIKLVDGETITVKNFYVSGDQGISQLVLEENNGALWWIADPMAGESYQSIASIDALLAGTTASTSEGAAIWPWALGGVAVAGGIALAAGGGGGGGGGGSDSDGGNNNGGGGDNGNGNGGNPTLPGTDPNDTTPPGAAGNLRFSADGTKLSGSAEANSTITVTDANGNVIGRGQTNGNGEFTVDLGKPYTNGETVTVTPTDGAGNVGPGTPVTAADTTPPVAPVVASVTDDVGSVTGSLTSGQTTDDARPTFSGSGEPGSTITIYDNGNAIGTAQVNTDGSWTFTPATALGDGAHQITTRATDSAGNTGPASPAFSLTVDTVAPNAPSGVTVNDTTGSVQGQLTAGQSTDANRPSLNGTGEAGSTIRIYDNGQLVGQATVGEDGKWSFTPDNPLADGPHAITLTETDLAGNTSAASEPFAFTIDRTPPALPTISLIPGGTEVIGTAEPGSTITITNGAGQEIGTGITDANGEFRVELSEAQTEGNTLNVVATDAAGNASQPANVVVGDVTPPLAPTDLAISEDGSSVTGRAEAGSTVTIRDGDDVIGRGVADADGNFDIILSTPRLNGEELAVTATDAAGNTGPENTVTAPDVTPPEAPVITSVVDNEDDITGVVLDGQVTNDTHPVISGTGEPGTTIYIYSGEDQVGFAEVDAEGNWSTELLLVDDGGYVLRAEAVDRYNNHSQPSNTWSIIVDATAPDAPAITQVINDLPDSAGVITNNSTTNDNRPTLYGTGEAGSTISIRVDGVEVGTAQVGNGGEWSFTPATALEDGPHDIRVVAKDAAGNSSAESGAFTLTVDTTAPEVPVITRVEDNTGSVQGDVTNNVPTDETRPVIHGTGPANSQISLYEGTTLLGTVTTNGDGVWSLQLATPLVNGTHAIVATVTDAVGNTSTSESFNLVVDTLAPGTPALPTITVNPDGGEQQPLSPGGSTRDTTPTLSGTGTEGDVVTIYNGTTPIGETTVQPDGTWTWTPPDGLPNGTYDLSLTVTNKDGAGNESAPSQSVSITIDTEAPDQPDAPVITDNVSEITGPVGNNGATNDTRPVISGTGTPDDIISIYDQTAAGNVKVGEAVVDVNGNWSWRPADELAQGQHSFTVTATDEAGNVSVVSNTVTVTVDSQIPAIPTIGSVDDNVGPVTGNIPAGSSSNGNTPTVTGTGENGTTVILYSNGVEVGRGLVTNGSWSITTPELKDGPTTLTVAAVDAAGNVSGQGSDFAFTVDTVPPGIPQLLEISNSILADGTLYVNNATPTLSGSGEPLSTITVFIDGNSVGQVQANAEGQWTLPLPEGTVLANDNHTITVVASDAAGNTSESTPVSVVVDTLPPADPVVTGIVSGGTPLNGTAEAGSTVTVTGPGGVVLGTGVANEQGEFSVALTPPQSDAVTLSVTASDPAGNVSDAVDFDVPATPPLPAVPVINEILDDNGTAGDVNVKGGSSNDTTPTLTGTAIAGSLVTIYLDGSATPLGTVTADAETGAWTFPIETALSAGNHSFTVTATVGAETSGQSPGATVNIDLTAPTAPAFGTVIDDVGTVSGAIVSGRATDDDLPTFNGTATPGDVITLYSGDTVLGTATVGNTGAWSITLAQPLDDDTYSLTLTATDPAGNESPRSAPFTLVVDTTAGEVLITGASDNVDPVSGNVADGGSTNDNTPTLTGTAEAGSSVAIYDGIKLLGTVTASAQGTWTFTPTSVLAEGQHVFTAVATDSAGNVTPVSGTYTLTVDMTPPATPAIVSISDDVEGSTGLLTNGQVTNDTRPELTGTGVAGSTVHILDNGLEIGTALVSSTGNWSFTPASDLAPGPHDLRVSATDAAGNVSGTSPVFSINIDTAAPLAPVLLTAVDDVGTTTSTLASGDTTNDARPTFTGSGEVGATIHIIVDEQEIGTAVVNATGSWTFTPEAPLGEGTRSIRFTATDTAGNTGEASEPFILTVDTVAPAAPTLTAISDNVGPIQTPIATSGQTTDDTTPTLTGRAEANATVTIYDNGAVLDTVQANETGDWTYTPAEALSSGSHTFTTRATDAAGNLSELSPGFTLIVDTLKPVAPTIALAQDDVAPVTGSLTSGSSTNDNLPVLTGTSEPNARVQIFEGDTLLAEGVADASGNWSIPLTEALSDDQHTFTAVAIDAAGNASDPSATFILTVDTVTPEAPVLVSVTDDVGTTVVLDNGQLTNDANPTLRGTAEAGSTVSVYDGTTLLGTALVGADNAWIFTPLSPLGDGEHTLTVTTTDAAGNVSPPTGGFVINVDATAPVAPAIVSIVDDTGSVQGPVLSGAPTNDTRPTLNGTAEAGAIVRIYDGDTLVGETIANGEGQWTLTQTTTTLTDGVHNFTATATDPAGNISPASPVTSITVDTIAPGAPDSFTILNNGNTLTGRGEVGSTITVRDGDTVVGTGVVNDDGSFSLTLTTPKLNGELLTVTATDIAGNTGAEGQVTAPDTTPPAVPVITDVVDNVTDFTGTVNDGQTTNDNTPLVRGTGVANATILLYSGTELIGTTQVSAGGTWEIQLTAPLPDGGHVLTAQSADAAGNNSAPSNSWSIVVDATAPDAPVITQAINDLSGTPVAIGNNTATNDTRPTLSGTREAGTTLSIRVDGVEVGTTQVGAGGEWTFTPEDPLGEGLRVITVVAKDAAGNTGEPSVAFNITIDTVPPAAPVITLAEDTTGTVTGDVVSDQPTDETQPLIRGTGPANSQINLYEGTTLLGTATTSATGAWSIQLATPLGNGTHALTATVTDAAGNTATSGTFNLVIDNVPPATPDIPAITVNPDGGGETTLTGGGSTRDTTPTLSGTGNEGDIVTIYNGTDPIGQTTVQPGGTWTWTPPDGLPNGTYDLSLTVTNSDGAGNQSAPSQPISITIDTEAPDAPELPVVTDNVSDITGPVDNNGATNDTRPVLSGTGTPDDVITIYDQTTTGNLAVGEVVVDINGNWTWRPDLPLSEGSHSFTLTATDPAGNESPVSGAMTVTVDSLVPDIPVISSVNDNVGPVTGNVTANGSSNDNTPTVTGTGENGTTVILYSNGVEVGRGLVSGGTWTITSTALRDGPTTLTVAALDAAGNRSEAGSNFAFTLDTVPPAIPQLLDISDSTLAGGQLYANSSTPTLSGTGEPLSTISVYADNTLIGEVQTNAQGQWTLPVPAGTPLTDNPHTLTLVASDAAGNTSQSTPVNVIIDTQAPGVPVVTGIVSGGTPLNGTAEAGSTITVTGPGGAVLGTGVTNDQGQFSIALTPPQSDAVTLSLTASDVAGNASLPGSYEVPATPALPDVPVIDAIVDDNGTGGGVNVKGLSSNDATPTVTGTAIPGSVVSVYLDGSTTPLGTVTADATTGAWSFPITTALAEGNHSFSVTATVGAETSGQSPGATVNIDLTPPAAPTLGSLVDNVGTVTGSVVSGTPTNDNQPTLNGTATPGDVITIYSGDTVLGTVPVSATGAWSFTPPAALDDGTYTLLITATDPAGNQSPPSAPFSLVVDTVTATPVITGANDDVGPVTGNVASGGVTNDNTPTLSGSAEAGSSVSIYEGTRLLGTVVANDSGIWSFTPTVVLAEGLHSFTAIATDVAGNVSTASGAYTLTVDMTPPATPVLVSVNDDVAGNTGVLVSGQLTNDARPELIGTGVAGSTVHILDNGQEIGTVLVDGTGNWRFTPTSDLAQGPHELRISATDAAGNLSGTSPAFSLTVDTVAPLAPVLATVVDDVGTVTGPVNNGGVTNDTRPTFNGTGEAGSIVSILVDGQAIGTAVVNASGSWTFTPDTALAEGLRSVTLTATDPAGNTGPASAAFTLTVDTTAPTAPTIVAAADNVGSIQTPITVSGQVTDDATPTLTGRAAASATVTLYDNGVLLGTVQASAAGDWTFTPENALGNGSHTFTASATDAAGNLSEASAGFTLIVDTVKPLAPVITLAQDDVGTVTGSLISGQRTDDTLPVLTGTSEANARVQVFEGDTLLGTATADASGNWTLPLTTPLTNATHNFTAVATDAAGNVSDPSSTFSLTVDTLPPAVPVLVSVVDDVGTVTTLTSGQLTNDAKPTLSGTAEAGSTVSIYDGALLLGSVVADANSAWSFTPANPLADGLHSLTVTATDAVGNVSLATAGFTVNVDATAPTAPVITSVVDDVGTIQGPVLNGNPTNDTRLTLNGTAEANSVVRIYDGTTLVGEVTANAQGQWTLAQTTTTLTDGVHNFTATATDAAGNLSAASPVTAITVDTIAPGAPGGFSVLESGGRVNGTAEAGSTVTILGTDNVTVLGSGVADASGRFSIALTTPQVNAELLHVFATDRAGNAGLTVDLRMPYSVIPTAPVITSVNDNVGSIIGNLLNGQSTDDTTPTLTGTAQPLSTITLYDNNVLLATVTTNAAGVWTYTPTVPLGNGSHAFTATAGNAVGTSPVTPLSTVIVDTVAPGTPQGTFNADGSVLSGTAEAGSTITLLLSDNSVVTTTANAQGGWSYTFLDKQSEGERITLSATDAAGNTSATGTVIAPNLPLSASDNVVGLALTTNATTSTAQYSDYGVQLVGGVGNVLSLLGDNSAQVTFTVPTGGSADMEINASATGIVLSLLNTLEIIVQRWNGTTWTTEVDTGLPQFANLLTLGASGVTLNLTGMQGGQYRVLSYNSNLLATGSYTSLDVDVVQTTAGTLSGSLVTSGNVITDTDPVSGSDSAPNGTVVTSITNASGVTVNVAAGAAGTTINGLYGTLTLHADGSYTYTLTNTSASVLGRTDTFTYNIAGKGATDDARLVITLGENTVRNSVTAVDDTASLTFGTEVHAIDYGPSSQGGFTVVGVNLGNVLNLNLLDDRSESVKYSVAEGTTRTMTIQSTVGGVALASVFDLYIYKFNPATQSYERMRTEAGWLRAPLLGGSSAPLTLTLPAGDYIFLLNTVSGITALTGYRLNVLEDHVYAVTSTTAATTGDVLQSDIVPAGTHVTQVNGVDVNATGTTRIDGQYGTLLIDADGKYTYTLRAGVGADLISTPDTFVYTVTAPNGDKDTASLNITPTPVALDAVNDVSREMVVDATPQVAAYRDDTVGVATWNAALLASTSGRGSGTFEVAANTALHDVVLHFNVASLLSLGGLNVTWTITGAGVTRSGSFNGGLLLGGTATINLPDLDLNAGTYTLSFTGSMGPLGVGQISITPYVTGTTLYLNNELTTAGHTVTGNIFDGTDSLGVLDQVHSVDSRLSITGYNGTTTTLDPYTTATATATVQGHYGVLTIGVDGNYTYALNSGVSLASMTSKETFTYKLTGDNGTSDTATLTINMAPKFVSSEHNDTFTGSAYGDTLIYEVLNNTAGNGTAGNGGNDHWTNFSLTQGDKIDISDLLVGWNGDNATLGNYLHVTNSNGNTVISVDRDGAANTYTNTTLVTLDNVQTTYEELVNQNHIITG
>NZ_CP040889.1|WP_039030048.1|892407_893808_+|TolC-family-outer-membrane-protein
MNKVPCWWLGCCLLSAQVLAADSPAVISFGQLNEDRELPALDGRVALPTSQAAPGTLTLGDAVTRAVNWHPTIREAVGKLYEQIQQVDVAKSKYYPQISAGLDNGYSNNSSDTGFTPSVVVSLSQMLYDFGKVASQVRAEDAGVVQQQANVLLSIDTIARDTATALVQVQMWQQMVETAQEQLEALGAIGSLTRQRNDEGATSLSDVVQTDARIEGARSQLMQYQANLDSARATLMSNLGWSNLNGVSNAFPEKLTRSCDIKEPDDRLVPAVLASWAQANVAQANLDYANAQMTPTVSLEPQVRHYMNNRYPGHDTLDKTQYNVSVNVEMPIYQGGGLNARRNAASHAVEAAQSNIQRTRLDVRQKLLESKSQVMSLMSTLQIQSRQETLSQRTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFTQWQTAGQLRQLQINCLYNTGRMRNAFGLENHTIQSVEIQP
>NZ_CP040889.1|WP_139563467.1|893804_895997_+|type-I-secretion-system-permease/ATPase
MIRDDILYEDTLTQEALEHWAQAFGYVATRYRVACSPGALVAGAPWLQGKSKIPALTGLAREAGLSFQLLTNGQESINSWRLPVVVELDDGKIGVIEHFDGEDMLDVCFFDGKAQTNRISLAKMLPAIHQVVALRPLAALKDSRVDAYISKYRPDWLYRLVMRDLRPYTYVMLAALFINLLSLAGILFSMQVYDRVIPAQSYPTLYVLTIGVLIATLFGFILRIARSHIMDLLGKRADMRVSDRVFGHALRLRNSAVPRSTGSFISQLRELEQIREMVTSSTISTIVDLPFFFLFVIVLAIIAPSLAWIAPVAAVLMVLPGLLLQKKLAALAKQSAHESTLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIQITAESGLKTRELTQGLISWGMTIQSLVYTAVIVVGAPMVIEGEMTTGAVVAASMLASRMIAPMATLCGVLARWQQVKAAKEGLDNIMQLPTENQREETPIRQDVLRGHYFFDQAQFAYAGEVQTPALRINRLEIKPGEHVAILGRNGAGKSTLLQAMVGGMDLIGGELRLDNLSLPHLDMADVRHNVGLMSQNARLFYGTLRENITLGMPRATDEEIFAVLEMCGAASFVQKLAKGLDHPIMENGVGLSGGQRQSILLARMFLRDPNVVLLDEPTASLDEHTEREFIQRLGQWLGNRTLIVATHRVPMLELVDRVVVLKEGMLVMDAPKAQALSNSRMQQQQQANGREWKNENQSA
>NZ_CP040889.1|WP_139565423.1|896007_897177_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MDDLDNALGSESGYTGARSIVLFSLLLFVAAGVWAWFSILDEVSTGTGKVIPSSREQVLQSLDGGILAELKVHEGDQVQAGQVLARLDPTRSESNVGESAARYRASLASSARLHAEVNDLPLTFPAELKKWPDLIAAETRLYNSRREQLEDSRRELRQALELVNAELAITQRLVKTGAASHVEALRLQRQKSDLELKLTDLRSQYYVQAREALSKSNAEVDMLSAVLKGREDSVTRLTMTSPVRGIVKNIKVTTIGGVIPPNGEVMEIVPVDDHLLIETRLSPRDIAFIHPGQKALVKITAYDYAIYGGLDGVVETISPDTIQDEAKPEVFYYRVFIRTSQDYLVNKAGRHFSIVPGMIATVDIKTGEKSVMDYMIKPFNRAKEALRER
>NZ_CP040889.1|WP_139563468.1|897469_898177_-|hypothetical-protein
MKGLCAVLAVMTILLTAKGIAKEPPTQVVYRFDNHRYLELKGWDCQGELWYTDTKRGIHSQPYFQFYRIFTRKFIHPSERYISIPNWEVDGFLVSKDYGETWRAVGFAPGHNEPNGDNRAPAEDAVSFTVVNDQGFLQTKHRLYMSSKPFEDPRILPGGPGIKYTVDDGMGNNVHGKLEPQSPGWSWGMIYMTKQGLEGSSQQLKTNWQDLPDTVPEVKNYTGWDRMRCDMDVGR
>NZ_CP040889.1|WP_139563469.1|898180_898888_-|hypothetical-protein
MKGLCIVFAVATILLTANSLAKEPPTQVVYRFDDHRYLELKGWGCEGELWYTDTKRGIHSQPYFQFYRIFTRKFIHPSERYISIPNWEVDGFLVSKDYGQTWRAVGFAPGHNEPNGDNRAPAEDAVSFTVVNDQGFLQTKHRLYMSSKPFEDPRILPGGPGIEYTVDDGMGGTVHGKLKLGSSGLAWGLDYITKQALKDDTAQFKVNYQGLPDKVPEVKNYTGWDRMRCDMDAGR
>NZ_CP040889.1|WP_139565424.1|898891_899587_-|hypothetical-protein
MKGLCIVFAVATILLTANSFAKEPPTQVVYRFDDHRYLELKGWGCEGELWYTDTKRGIHSQPYFQFYRIFTSKFIHPSERYISIPNWEVDGFLVSKDYGETWRAVGFAPGHNEPNGDDYAPAEDVLSFTVVNDQGFLQTKHRLYMSSKPFDDPRVVSGGPGITYTLEDGTVQSISPDFPGWKWGMVYFTKGWLEGKVVSHEQNYQGLPDKVPEVKGYTGWDRMRCDMDAGR
>NZ_CP040889.1|WP_139563470.1|899590_900286_-|hypothetical-protein
MKGLCIVFAVATILLTANSFAKEPPTQVVYRFDDHRYLELKGWDCEGELWYTDTRKKIRSQIFSQFYRLFTRKFIHPSERYIAITGWGADGFRVSKDYGKTWAGVRFAPGHNEPNGDDYAPYEDVLSFTVVNDQGFLQTKHRLYMSSKPFDDPRVVSGGPGITYTLEDGTVQSISPDFPGWKWGMVYFTKGWLEGKVVSHEQNYQGLPDKVPEVKGYTGWDRMRCDMDAGR

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Crispr_ID: NZ_CP040889_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040889_2

3343687-3343782

Orphan

Consensus_repeat	Method
CTGGAAGTGAACGGAACCACCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040889_2

>merge|NZ_CP040889|2|3343687-3343782|CRISPRCasFinder
CTGGAAGTGAACGGAACCACCACCGTAGCCGCATATTCCCCTCAACTCTGAGGCAGATGAACCTCAGCAGCAACTGAAAGTGAACGGAACCACCAC

>NZ_CP040889|2|2|3343687-3343782|CRISPRCasFinder
CTGGAAGTGAACGGAACCACCAC	CGTAGCCGCATATTCCCCTCAACTCTGAGGCAGATGAACCTCAGCAGCAA
CTGAAAGTGAACGGAACCACCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040889.1\|WP_139564518.1\|3329195_3329717_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040889.1\|WP_139564527.1\|3351767_3352562_-\|iron-enterobactin-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182336
NZ_CP040889.1\|WP_139564521.1\|3336575_3338798_+\|carbamoyltransferase-HypF	unknown	unknown	gnl\|CDD\|223146
NZ_CP040889.1\|WP_139564528.1\|3352558_3353548_-\|iron-enterobactin-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182463
NZ_CP040889.1\|WP_139564525.1\|3346344_3347550_+\|enterochelin-esterase	unknown	unknown	gnl\|CDD\|236695
NZ_CP040889.1\|WP_138369621.1\|3356002_3356962_-\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236806
NZ_CP040889.1\|WP_139564526.1\|3347770_3351637_+\|enterobactin-non-ribosomal-peptide-synthetase-EntF	unknown	unknown	gnl\|CDD\|236668
NZ_CP040889.1\|WP_139564522.1\|3338812_3339832_+\|HoxN/HupN/NixA-family-nickel/cobalt-transporter	unknown	unknown	gnl\|CDD\|225911
NZ_CP040889.1\|WP_039031405.1\|3357149_3358325_+\|isochorismate-synthase-EntC	unknown	unknown	gnl\|CDD\|184977
NZ_CP040889.1\|WP_139564520.1\|3334421_3336572_+\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|130652
NZ_CP040889.1\|WP_039031412.1\|3347561_3347774_+\|MbtH-family-NRPS-accessory-protein	unknown	unknown	gnl\|CDD\|225790
NZ_CP040889.1\|WP_138369623.1\|3353547_3354552_-\|Fe(3+)-siderophore-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182464
NZ_CP040889.1\|WP_082019595.1\|3343225_3343501_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040889.1\|WP_139564529.1\|3354663_3355911_+\|enterobactin-transporter-EntS	unknown	unknown	gnl\|CDD\|236700
NZ_CP040889.1\|WP_039031415.1\|3342842_3343304_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040889.1\|WP_139564517.1\|3328446_3328902_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040889.1\|WP_139564519.1\|3333837_3334383_+\|electron-transport-protein-HydN	unknown	unknown	gnl\|CDD\|182382
NZ_CP040889.1\|WP_139564524.1\|3343848_3346089_-\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|237410
NZ_CP040889.1\|WP_139564523.1\|3339982_3342130_+\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|130652
NZ_CP040889.1\|WP_139565453.1\|3329940_3331011_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380205

Protein	Function_ID	Function_description	E-value
NZ_CP040889.1\|WP_139564527.1\|3351767_3352562_-\|iron-enterobactin-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182336	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein.	0
NZ_CP040889.1\|WP_139564521.1\|3336575_3338798_+\|carbamoyltransferase-HypF	gnl\|CDD\|223146	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP040889.1\|WP_139564528.1\|3352558_3353548_-\|iron-enterobactin-ABC-transporter-permease	gnl\|CDD\|182463	PRK10440, PRK10440, iron-enterobactin ABC transporter permease.	0
NZ_CP040889.1\|WP_139564525.1\|3346344_3347550_+\|enterochelin-esterase	gnl\|CDD\|236695	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional.	0
NZ_CP040889.1\|WP_138369621.1\|3356002_3356962_-\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236806	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional.	0
NZ_CP040889.1\|WP_139564526.1\|3347770_3351637_+\|enterobactin-non-ribosomal-peptide-synthetase-EntF	gnl\|CDD\|236668	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF.	0
NZ_CP040889.1\|WP_139564522.1\|3338812_3339832_+\|HoxN/HupN/NixA-family-nickel/cobalt-transporter	gnl\|CDD\|225911	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism].	2.68425e-142
NZ_CP040889.1\|WP_039031405.1\|3357149_3358325_+\|isochorismate-synthase-EntC	gnl\|CDD\|184977	PRK15016, PRK15016, isochorismate synthase EntC; Provisional.	0
NZ_CP040889.1\|WP_139564519.1\|3333837_3334383_+\|electron-transport-protein-HydN	gnl\|CDD\|182382	PRK10330, PRK10330, electron transport protein HydN.	3.60351e-107
NZ_CP040889.1\|WP_139564520.1\|3334421_3336572_+\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|130652	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type. This model describes a subset of formate dehydrogenase alpha chains found mainly archaea but also in alpha and gamma proteobacteria and a small number of gram positive bacteria. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The enzyme's purpose is to allow growth on formate in some circumstances and, in the case of FdhH in gamma proteobacteria, to pass electrons to hydrogenase (by which process acid is neutralized). This model is well-defined, with only a single fragmentary sequence falling between trusted and noise. The alpha subunit of a version of nitrate reductase is closely related.	0
NZ_CP040889.1\|WP_039031412.1\|3347561_3347774_+\|MbtH-family-NRPS-accessory-protein	gnl\|CDD\|225790	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown].	4.5321e-27
NZ_CP040889.1\|WP_138369623.1\|3353547_3354552_-\|Fe(3+)-siderophore-ABC-transporter-permease	gnl\|CDD\|182464	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease.	6.20984e-174
NZ_CP040889.1\|WP_139564529.1\|3354663_3355911_+\|enterobactin-transporter-EntS	gnl\|CDD\|236700	PRK10489, PRK10489, enterobactin transporter EntS.	0
NZ_CP040889.1\|WP_139564524.1\|3343848_3346089_-\|TonB-dependent-siderophore-receptor	gnl\|CDD\|237410	PRK13524, PRK13524, FepA family TonB-dependent siderophore receptor.	0
NZ_CP040889.1\|WP_139564523.1\|3339982_3342130_+\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|130652	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type. This model describes a subset of formate dehydrogenase alpha chains found mainly archaea but also in alpha and gamma proteobacteria and a small number of gram positive bacteria. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The enzyme's purpose is to allow growth on formate in some circumstances and, in the case of FdhH in gamma proteobacteria, to pass electrons to hydrogenase (by which process acid is neutralized). This model is well-defined, with only a single fragmentary sequence falling between trusted and noise. The alpha subunit of a version of nitrate reductase is closely related.	0
NZ_CP040889.1\|WP_139565453.1\|3329940_3331011_-\|hypothetical-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	1.15912e-18

>NZ_CP040889.1|WP_082019595.1|3343225_3343501_-|hypothetical-protein
MRLAPAYRKRLSDFQPDQGAAVSLLFLCDYFIALTFIAPGLVGRVRRSRHPALLRRAALRLPGLQTQFFNASIATRPSGVCSQRGALSVSA
>NZ_CP040889.1|WP_039031415.1|3342842_3343304_+|hypothetical-protein
MATTPTQAHPLFTVPFSHNTDFTVLANHCERFAYTLLETDEPAEKLALCARLCACLALLQPTLNEPIPAHMVEQFTLNDLPSRLPAFEPESDQLGIYCQTVTQLLISNVLPPEMARVMEGLLYDLVSFYADTLNAPRWLQTPDGRVAIDALKN
>NZ_CP040889.1|WP_139564523.1|3339982_3342130_+|formate-dehydrogenase-subunit-alpha
MKKVVTVCPYCASGCKINLVVNNGKVVKAEAAQGKTNQGDLCLKGYYGWDFINDTKILTPRLKSPMIRRERGGKLEAVSWDEALDYVAGKLSAIKAEHGPDAIMTTGSSRGTGNETNYIMQKFARAAVGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNSIVGIENADMVFIFGYNPADSHPIVANRVIKAKRNGAKIIVCDPRKIETARIADMHLALKNGSNIALLNAMGHVIIEEQLYDRAFVAARTEGFEEYRKIVEGYTPESVEAVTGVSAAEIRQAARMYAAAENAAILWGMGVTQFYQGVETVRSLTSLALLTGNLGKPSAGVNPVRGQNNVQGACDMGALPDTYPGYQYINKPENRAKFAKAWGVDSLPAHTGYRISELPHRVAHGEVRAAYIMGEDPLQTDAELSAVRKAFEELELVIVQDIFMTKTAAAADVILPSTSWGEHEGVYTAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYSNTQEIWDELRHLCPDFYGATYEKMGELGYIQWPCRDESEADQGTDYLFEKEFSTPNGLGQLYTCDWVAPIDKLTEEYPLVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTADAERLGIEDEALVWVTSRKGKVITRAQVSDRPNKGAVYMTYQWWIGACNELVTENLSPITKTPEYKYCAVRVEPIADQQAAEQYVIDEYHKLKKHLRELAVG
>NZ_CP040889.1|WP_139564522.1|3338812_3339832_+|HoxN/HupN/NixA-family-nickel/cobalt-transporter
MYMKYFNNHPKAMALMLALIATNILAWALAFYLFHATPSLLAASLLAWCYGLRHAVDADHIAAIDNVTRKMMQQGKRPCGVGAWFSLGHSTIVVLASIAIAATATAFSRNMEWFHETGGTIGTAVSAFFLLAMALVNLVILRDVWGSFNKMKRGESVPDAVSFAQGGVMNWLFRSAFRLVTRSWHMYLVGFLFGLGFDTATEIGVLGISAAGASSGMSVWAIMVFPLLFTSGMAMIDTLDNLIMVGAYGWAFNKPQRKLYYNMTITGTSVVVALFIGGLEALGLLADKLGLEGGLWNGVAALNDNLGNAGFIVVGLFVACWLISLINYRFKGYDALIVR
>NZ_CP040889.1|WP_139564521.1|3336575_3338798_+|carbamoyltransferase-HypF
MSTNGTLVRIRGKVQGVGFRPWVWQVAQQLELKGDVCNDGDGVEVRLVGEAQAFIRQLAAGCPPLARIDDISQQPWRWAQRPVDFTIRASAHGQMTTQVVPDAATCPACLAEMNDPHERRYRYPFINCTHCGPRFTIIRAMPYDRPATTMAAFALCPACEAEYRNPADRRFHAQPVACPDCGPQISWVSGAAREEREPALQAAVSMLKQGGIVAIKGLGGFHLACDAQNPAAVNTLRERKRRPTKPLAVMIPERLAVWLPADVQALLRSPAAPVVLVAKHTLFCEAIAPGLNEVGVMLAANPLQHLLMQDLDRPLVMTSGNLNGCPPALTNDKALRDLAGIADGWLLHNRDIVQRMDDSVMRASGEMLRRARGFVPDALPLPPGFEHAPSLLCLGADRKNTFCLVRGGQAVLSQHLGDLHDDDAQAQWQQALTAIQDIWQFTPERVVTDAHPGYRSTQLGEAMPCPQHRVLHHHAHAAACMAEHGWPRDGGDVIALVLDGIGQGENGALWGGECLRVNYRTCEKLGGLPAMALPGGDLAARQPWRNLLAQWQAFVPEWPTLPQTALLENKPWQPLARAIERGINAPLASSAGRLFDAVAAALNCAPEQISYEGEAACRLEALALSAAPQSHPVTMPVRDGELDMATFWRQWLSWQASDAERAWAFHDALAKGLATLAGEHARQHQLSTIVCSGGVLHNRLLRERLQFWLSDFTVLFPGRLPAGDGAVAFGQAVIAAAIFS
>NZ_CP040889.1|WP_139564520.1|3334421_3336572_+|formate-dehydrogenase-subunit-alpha
MKKITSVCPYCGAGCKLKLVVENNKIVRAEAAEGVTNQNQLCLKGYYGWDFLNDTRILTPRLTQPMIRYQKGGKFEPVSWEEAIRYTARRLGEIKAKYGPRAIMTTGSSRGTGNETNYVMQKFARGVLNTNNVDCCARVCHGPSVAGLQETLGNGAMSNSISDIEHSKCLLIFGYNCADSHPIVARRVIKAKQNGAKVIVCDPRKIETARIADRHLQINNGCNMALVNAFIYTLLEENLYNSDYVARYTDGLETLRETVRDYAPENVESITGVSARQIRDAMRIYAAAPSATVMWGMGVTQFGQAVDVVKGLSTLALLTGNLGREHVGVGPVRGQNNVQGACDMGVIPNQFPGYQDVTDPQVREKFARAWGVDPERMDDQVGVRITEVPHLALEGKVKAYYIMGEDPLQTEADLGLVRKGFAALDFVVVQDIFMTKTAEAADVLLPATSWGEHGGVFTCADRGFQRFEKAVEPKYDVKRDWEIVSLIATEMGYPMHYRDNQQIWDEMRELCPLFYGVTYEKMGDMGHVQWPCPTLDHPGTPWLYEGNRFDTPNGKGQLFAAPWRKPAEMPDADYPLVLCTVREVGHYSCRSMTGNCAALQALADEPGFVQMNPQDAAKLGIQDRQLVWVSSRRGKVISRADVNERINQGAVYMTYQWWIGACNELTQDNLDPISKTPETKYCAVKIDAIADQPWAENYAQTTYHDMKSRLREAVES
>NZ_CP040889.1|WP_139564519.1|3333837_3334383_+|electron-transport-protein-HydN
MNRFIIADASKCIGCRTCEVACVVSHHDTQDCASLTPQNFLPRIHVIKGVNVSTATMCRQCEDAPCATVCPNGAITRDNNFVHVHQERCIGCKTCVVACPYGAMEVVLRPVVRSIGSGLNVMSEKAEANKCDLCHHQPDGPACVQACPTNAIVCIDRKKLEQLSLEKRRRAALDNVSSMML
>NZ_CP040889.1|WP_139565453.1|3329940_3331011_-|hypothetical-protein
MDRVEHLDFYDVLEEQGFAAIVARNTGLTNLPEDIFGTSQLGKPPVVANNNLVLNGGNGNDILNGGIGHDVLNGGAGNDTLNGGAGNDSLNGGSGNDTLDGGDGADILQGGTGNDKLTGGAGNDRLEGGAGADTMAGGAGDDIYLVDNTKDIVKEDLNSGTNDVVQTTLNNYTLTTSVETLVFTGTGAFTGKGNATANTITGGSGNDSLYGMGGNDQLNGGAGNDSLDGGDGADNLQGGAGNDKLTGGAGNDRLEGGQGDDILNGGAGNDTFVFSAGFGRDRITGGFDSNPSGGQDYLDLSALGISAANFASSVSIAGGAGNSTLITLGNPANGNIITLENVKANTVDMHDFVLIG
>NZ_CP040889.1|WP_139564518.1|3329195_3329717_-|hypothetical-protein
MKLNKTLTLAIISVGLTGCAKVLPFDYDNYTGKDAATLYVLNRAGNVGTIYLGSYTLNSKDNCYDMSDRYELDSNVFQAKGNIVVSKVKPDVLYSVSQLESSGQFIQSTHSSIIPEAGKYYYIVSGNKAVQVPADFVPDAAVNSDEVVNKYGNNQVKYWNVKKICSRPFWKIG
>NZ_CP040889.1|WP_139564517.1|3328446_3328902_-|hypothetical-protein
MATIQILTYCHSDEIVNDHLTIMPLTAEADIFEVADHCAALVSILIETDDSSSRTALCERLLHALRQLRELCDADLPRHLLAHLIQGETLTSCMPDCWQDTAPQVDYALALVQAILGGTLAASVEKELAGLLHDLVWLLDEFVKEPYITMH
>NZ_CP040889.1|WP_139564524.1|3343848_3346089_-|TonB-dependent-siderophore-receptor
MNNKLHSLALLVNLGIYGVALPAMAAETAGHEDTMVITAAEQNLQAPGVSTITADEIRKNPSARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSIRLGWRGERDTRGDTGWVPPEMIERIEVIRGPAAARYGNGAAGGVVNIITKKVSNEWHGSWNTYLNAPEHNEEGSTKRTNFSLSGPLGDAFSFRLYGNLDKTQADAWDINQGHESERTGAYADTLPAGREGVENKDVNGVLRWEFAPMQALQFEAGYSRQNNLYAGDTQNTNNDNSSNGLVKKNYGKETNRIYRQNFALTWTGGWDNGITTNNWAQYEHTRNSRLGEGLAGGLEGLFNSDKFTDTDLSDVMLHSEINLPIDFIVNQNLTLGTEWDQQRMKDMSSNGQALQGGAIPGMTDNRSPYSDAEIFSLFAENNMELTDSTMLTPALRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPSLYQTNPNYLLYSKGQGCYASADGVGCYMLGNEDLKAETSINKEIGLEWKRDGWLAGVTWFRNDYRDKIEAGYAPIGQTSAGKTKTDIYQWENVPKAVVEGLEGTLNVPVSDAINWTNNITYMLQSKNKETGDRLSIIPEYTLNSTLSWQVQQDVSLQSTFTWYGKQQPKKYNYKGEPAVGSETDEVSPYSIVGLSATWDVTKYVSLTGGVDNVFDKRQWRAGNAQTTGNTTTGAYMYGAGAYTYNEPGRTWFMSVNTRF
>NZ_CP040889.1|WP_139564525.1|3346344_3347550_+|enterochelin-esterase
MTTLETGSDAWWQSKQGPEGVREGDHYRVTFYWRDPNGTEQASPLKRVWLYITGVTDHHHNARPQTLVRISGTDVWQWQGEFSPNWRGSYCFIPSEHDDDFADAVFATDPPDRMALREGWRKLLPKAIADPRNRQHWRGGRGHPVSALEMPEAPLQPGWDRPETPYQPAQCITWQSAKLGNTRRVWIFTTGEQTPHERPLAVLLDGQFWAESMPVWPALTALTLDGQLPPAVYVLIDVIDTAHRTRELPCNPDFWLAVQDELLPQVQALAPFSERADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSFWWPHRGGQQDGVIIEQLKNQQLSAQGLRIVLEAGRREPLIFRACEALYAGLQQTQQPVFWRPVDGGHDALCWRGGLTQGLMTLWQPLIQ
>NZ_CP040889.1|WP_039031412.1|3347561_3347774_+|MbtH-family-NRPS-accessory-protein
MEFSNPFDDPQGLFTIVQNAQQQYSLWPQQCALPDGWRVACEPQSQEACQQWLAAHWQTLIPAHFAQVKS
>NZ_CP040889.1|WP_139564526.1|3347770_3351637_+|enterobactin-non-ribosomal-peptide-synthetase-EntF
MSAQRPLVAAQPGIWMAEQLSDLPNAWSVAHYVELTGPVDAPLLAKAVVAGMMQADTLRTRFSEDNGEIGQWIDDSLILPEPHILDLRADGDPHAAALAVMHADLNQNLRVDSGQPTAFHLLIQVADNRWYWYQRYHHLVVDGFSFPAITRQIAAIYRAWLKGDATPDSPFTPFAEVVEEYQRYRDSEAYARDGAFWAEQRKQLPPPVSLSSAPLPGRAATTDILRLKLTADRHAFSQLANASQSQRTDLALALVALWLARLTGRMNYAAGFIFMRRMGSAALTATGPVLNVLPLAVNINPLETLPELAQRLAGQMKKMRRHQHYDAEQIVRDSGRAASDEALFGPVFNVKVFDYQLDIDGVQAVTHTLATGPVNDLEMALFPDEQGGLSIEILANKQRYDEATLVRHVERLHGLLAQFAANSDLRCGEAETVSDDEYRLLEKINQTAVPLPLTTLSALVAEQAAKTPDAPALADAHVELTYRQMREQVVALANQLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLQMMIEDAKPSLLITTDDQRPRFDHLPVTIFSYNTLLPAADSEPLHLSRPEQTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTAEDVVAQKTPCSFDVSVWEFWWPFIAGAKLVMAEPEAHRDPLAMQDFFAKYGVTTTHFVPSMLAAFVASLTPENVACCASLKQVFCSGEALPTELCREWEQLTHAPLHNLYGPTEAAVDVSWYPAYGPELAAVTGNSVPIGFPVWNTGLRILDAMMRPVPFGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFVPGERMYRTGDVARWLDNGAEEYLGRSDDQLKIRGQRIELGEIDRAMLTLPDVAQAVTHACVINQAAATGGDARQLVGYVVSESGLPLDRDALLAALKTRLPPHMVPVVILQLSALPLSANGKLDRKALPLPELTVKAQGRAPETDAEWTIAAAFSALLGCEINDTEADFFALGGHSLLAMRLAATLSRHFARQVTPGQVMVASTVGKLSALLSSEMSDEQAQRLGYETILPLRESHGPTLFCFHPASGFAWQFSVLARYLSPRWSITGIQSPRPGPMQDCATLDEVIEQHLATLRAQQPHGPYYLFGYSLGGTLAQGIAARLRAQGEAVAFLGLLDTWPPETQNWSEKEANGLDPEVLAEIERERQAFLAAQQGQASGELFSAIEGNYSDAVRLLTTAHSSSFDGKATLFVAERTRTMDPHKAWATWVEELEVYAQDCAHVDIISPQAFEQIGPVLKEILG
>NZ_CP040889.1|WP_139564527.1|3351767_3352562_-|iron-enterobactin-ABC-transporter-ATP-binding-protein
MTETATRLRGENLTLGYGKKTVAENLQVAIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPLHGNVFLDGEQIQRFASKEVARRVGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEAAVTKAMQATGITDLAAQSVDTLSGGQRQRAWIAMVLAQETSIMLLDEPTTWLDISHQIDLLELLSDLNRTQGFTLAAVLHDLNQACRYATHLIALRDGKIVAEGAPKEIVSPELIERIYGMRCMIIDDPVAGTPLVVPLGRR
>NZ_CP040889.1|WP_139564528.1|3352558_3353548_-|iron-enterobactin-ABC-transporter-permease
MAPSRRLVFSCLLLVLVSLGVAILSLKSGAVMLDFTQVLDALTGSAPRNITMVVNEWRLPRLTMALLVGAALGISGAIFQSLMRNPLGSPDVMGFNTGAWSGVLVAMVLFGQHLTAITLAAMAGGILTSLVVWALAWRDGIETFRLIIIGIGMRAMLMAFNTWLLLQASLETSLSAGLWFAGSLNGLTWAKTLPAAPLIVLMFICALLLVKRMRLLEMGDDSACALGVSVERSRLMLMLVAVVLTAAATAIAGPISFIALVAPHIARRLSGTARWGLTQSALCGSLLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLVQESRKK
>NZ_CP040889.1|WP_138369623.1|3353547_3354552_-|Fe(3+)-siderophore-ABC-transporter-permease
MSYSLSASRAVAVPGLLLLLTLAIALSLLVGAKPLPFSVVVDAFSATCQSADCTIVRDARLPRTLAGLLAGAALGLAGALMQTLTRNPLADPGILGVNAGASFAIVLGAALFGFSSPGEQLVMALCGAFAASLLVAFTGSQGGGQLSPVRLTLAGVALGAVLDGLSNGIALLNPDVYDQLRFWQAGSLDIRTLQTLQVVSVPVLIAAAVALLLSRALNSLSLGSDTATALGSRVARTQLLGLLTITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADILGRLLVPGELRVSVVSAFIGAPVLIFLVRRQRGGAL
>NZ_CP040889.1|WP_139564529.1|3354663_3355911_+|enterobactin-transporter-EntS
MTRQSWLLNLSLLKTHPAFRAVFIARFISILSLGLLGVAVPVQIQMMTHSSWLVGLSVTLTGGAMFIGLMVGGVLADRYERKTLILLARGTCGVGFVGLCLNAMLPEPSLIAIYALGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMVGGLLLGTGNVAWNYGLAAAGTFITTLTLLRLPLLPPPPQPREHPLKSLLAAIRFLFSNPLIGGIALMGGLLTMASAVRVLYPALALEWQMSVSQIGLLYAAIPLGAAFGALTSGNLAQSARPGLIMLLATLASFIAIGFFSLMPVWALGVVCLALFGWLSAVSSLLQYTLIQTQTPEAMLGRINGLWTAQNVTGDAMGAAILGGLGAIMTPVASASSSGFVLALVGVMLLVVLAELRRFRQEPMVIEKVS
>NZ_CP040889.1|WP_138369621.1|3356002_3356962_-|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein
MKLPAACRNTLLLISLLLSGLTSAVAADWPRQVTDSRGTHTLESKPTRIVSTSVTLTGSLLAIDAPVVASGATTPNNRVADDRGFLRQWGDIAKQRKLARLYIGEPSAEAVAAQMPDLILISATGGDSAVALYDQLSAIAPTLIINYDDKSWQALLTQLGTITGQEKQAATRIAEFDKQLARVKQQMKLPPQPVNAIVYTAAAHSANLWTAESAQGKLLQQLGFSLATLPAGLNPSQSQGKRHDIVQLGGENLAAGLNGEGLFLFAGDQKDVDAIYANPLLAHLPAVQNKRVWALGTETFRLDYFSATRVLERLETLFK
>NZ_CP040889.1|WP_039031405.1|3357149_3358325_+|isochorismate-synthase-EntC
MDTSLAEDVQHTATRLQKDSFFFMSPYRSFTTSGCFARFTTPAVNGDDPASAFQQQLAQAFADAKAAGIANPVMVGAIPFDTRQPSSLFIPQQWQNFARPARQQSARYAARSTPLTVKSRTEIPAQLAFEDMVARAAALTATPRVNKVVLSRLIDIATAENIDSSALLEKLIAQNPASFNFHVPLEDGGVLLGASPELLLRKEGAHFSSLPLAGSARRQPDDILDREAGNKLLASEKDRHEHDLVTQAMKAVLAPRSHQLTMPASPQLVTTPTLWHLATPVEGEAREHENALTLACLLHPTPALSGFPHQAAKELIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCARIQANSVRLFAGAGIVPASSPVAEWRETGVKLTTMLNVFGLH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

25211 : 74544

Enterobacteria_phage(28.89%)

tRNA,protease,holin,tail,terminase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039030830.1\|25211_26984_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_039030831.1\|27224_27791_+	hydrolase	NA	NA	NA	NA
WP_139563082.1\|27896_27989_-	preprotein translocase subunit SecY	NA	NA	NA	NA
WP_139563083.1\|28617_30123_+	hypothetical protein	NA	NA	NA	NA
WP_139563084.1\|30125_30482_+	GtrA family protein	NA	NA	NA	NA
WP_139563085.1\|30496_31441_+	glycosyltransferase	A8CG95	Salmonella_phage	3.7e-55	42.1
WP_139563086.1\|32886_33285_+	hypothetical protein	NA	NA	NA	NA
WP_139565404.1\|33523_34279_-	hypothetical protein	K7P6M1	Enterobacteria_phage	2.7e-80	60.3
WP_139563087.1\|34388_34691_-	hypothetical protein	NA	NA	NA	NA
WP_139563088.1\|34690_36556_-	hypothetical protein	A0A1V0E5M2	Salmonella_phage	8.7e-32	53.3
WP_139563089.1\|36634_37300_-	hypothetical protein	O64337	Escherichia_phage	3.4e-71	62.7
WP_139563090.1\|37296_37599_-	hypothetical protein	C0LP47	Escherichia_virus	5.0e-38	72.0
WP_139563091.1\|37598_40982_-	DUF1983 domain-containing protein	Q9MCU0	Escherichia_phage	0.0e+00	77.6
WP_139563092.1\|41034_41634_-\|tail	tail assembly protein	K7PM97	Enterobacterial_phage	6.8e-79	76.5
WP_139563093.1\|43520_43859_-	hypothetical protein	NA	NA	NA	NA
WP_139563094.1\|43882_44593_-	peptidase P60	K7PGV2	Enterobacterial_phage	3.1e-131	87.3
WP_139563095.1\|44594_45350_-\|tail	phage minor tail protein L	K7PKU0	Enterobacteria_phage	1.1e-129	88.4
WP_139563096.1\|45346_45694_-\|tail	phage tail protein	K7P7G7	Enterobacteria_phage	6.8e-39	66.1
WP_139563097.1\|45693_48198_-\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	5.2e-298	66.6
WP_139563098.1\|48178_48487_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.3e-22	54.1
WP_139563099.1\|48507_48918_-\|tail	phage minor tail protein G	M9NZD7	Enterobacteria_phage	6.4e-20	43.8
WP_139563100.1\|48959_49697_-\|tail	phage tail protein	M9NYX0	Enterobacteria_phage	1.5e-96	73.1
WP_139563101.1\|49704_50103_-\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	1.2e-44	62.8
WP_139563102.1\|50099_50654_-\|tail	phage tail protein	K7PKQ5	Enterobacteria_phage	1.9e-43	62.7
WP_139563103.1\|50664_50940_-	ATP-binding protein	K7PH43	Enterobacteria_phage	1.2e-14	44.0
WP_139563104.1\|50932_51256_-	DUF2190 family protein	NA	NA	NA	NA
WP_139563105.1\|51336_53397_-\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	86.2
WP_139563106.1\|53278_54784_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	2.0e-212	72.5
WP_139563107.1\|54780_55002_-	hypothetical protein	A5LH28	Enterobacteria_phage	3.8e-19	69.0
WP_139563108.1\|54998_57101_-\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	80.7
WP_097455171.1\|57100_57589_-	DUF1441 family protein	K7PJY2	Enterobacterial_phage	4.9e-67	79.6
WP_139563109.1\|57830_58172_-	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	3.2e-09	36.9
WP_139563110.1\|58852_59089_+	hypothetical protein	NA	NA	NA	NA
WP_139563111.1\|59252_59432_-	hypothetical protein	K7PM01	Enterobacterial_phage	3.7e-17	90.9
WP_139563112.1\|59376_59652_-	hypothetical protein	G8C7W1	Escherichia_phage	9.8e-25	70.0
WP_139563113.1\|59659_60289_-	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	4.2e-103	88.0
WP_126125766.1\|60288_60570_-\|holin	phage holin family protein	A0A0U2SHD1	Escherichia_phage	2.7e-17	46.0
WP_063136051.1\|60556_60943_-	hypothetical protein	A0A192Y8P2	Salmonella_phage	3.3e-58	95.3
WP_139563114.1\|61086_62007_+	hypothetical protein	A0A1B5FPA3	Escherichia_phage	3.5e-58	74.8
WP_139563115.1\|62118_62955_-	antitermination protein	A0A1B5FPA5	Escherichia_phage	3.2e-111	80.4
WP_139563116.1\|62951_63923_-	DNA primase	F1C597	Cronobacter_phage	8.0e-162	84.0
WP_139563117.1\|63919_65530_-	DEAD/DEAH box helicase family protein	F1C598	Cronobacter_phage	1.5e-277	86.8
WP_139563118.1\|65955_66252_-	hypothetical protein	A0A286S2B5	Klebsiella_phage	3.9e-27	76.5
WP_139563119.1\|66235_66466_-	helix-turn-helix domain-containing protein	A0A2H4JEY0	uncultured_Caudovirales_phage	2.7e-12	52.1
WP_139563120.1\|66585_67275_+	helix-turn-helix domain-containing protein	F1C5C2	Cronobacter_phage	7.3e-85	66.2
WP_139563121.1\|67457_67778_+	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.3e-23	54.9
WP_139563122.1\|67767_67965_+	hypothetical protein	NA	NA	NA	NA
WP_139563123.1\|68144_68369_+	hypothetical protein	NA	NA	NA	NA
WP_139563124.1\|68369_68750_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	1.0e-40	68.6
WP_139563125.1\|68727_68970_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	6.9e-22	64.3
WP_139563126.1\|68941_69160_+	hypothetical protein	A0A286S1P6	Klebsiella_phage	5.2e-21	72.2
WP_139563127.1\|69156_69663_+	hypothetical protein	F1C5A2	Cronobacter_phage	2.5e-50	53.6
WP_139563128.1\|69674_70424_+	ORF6N domain-containing protein	A0A1B5FPC0	Escherichia_phage	3.8e-119	86.7
WP_139563129.1\|70426_70849_+	hypothetical protein	NA	NA	NA	NA
WP_139563130.1\|70949_71195_+	DUF1233 family excisionase	Q8W657	Enterobacteria_phage	6.5e-36	85.5
WP_139563131.1\|71250_72564_+	DUF3596 domain-containing protein	Q8W658	Enterobacteria_phage	2.4e-222	84.6
WP_139563132.1\|72542_73316_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	1.8e-60	83.5
WP_138369354.1\|73367_73763_+	hypothetical protein	NA	NA	NA	NA
WP_039030834.1\|73803_74544_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	1.8e-25	31.7

DBSCAN-SWA_2

749660 : 834585

Shigella_phage(23.21%)

tRNA,protease,holin,tail,terminase,head,portal,plate,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039029773.1\|749660_750761_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_039029774.1\|750967_751387_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	7.0e-14	35.4
WP_139563385.1\|751458_752157_+	DTW domain-containing protein	NA	NA	NA	NA
WP_139563386.1\|752192_754856_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_039029777.1\|754966_756322_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_139565418.1\|756365_756689_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_139563387.1\|756685_757993_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.3e-42	30.1
WP_039029779.1\|758146_758602_-	DUF4385 domain-containing protein	A0A0C5AAP9	Cyanophage	2.7e-35	49.3
WP_039030107.1\|764137_766711_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	7.1e-125	34.9
WP_139563388.1\|766840_767572_-	polyphenol oxidase	NA	NA	NA	NA
WP_039030105.1\|767568_768549_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_039030104.1\|768679_769417_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_032613238.1\|769688_770030_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_139563389.1\|770288_771449_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_139563390.1\|771445_772318_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_139563391.1\|772378_773500_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_039030100.1\|773510_774581_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	6.9e-90	51.8
WP_139563392.1\|774795_775170_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_139563393.1\|775260_775854_+	DUF4154 domain-containing protein	NA	NA	NA	NA
WP_139563394.1\|775846_777067_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_139563395.1\|777080_777563_+	OmpA family protein	NA	NA	NA	NA
WP_139563396.1\|777567_778935_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_139565419.1\|778987_779314_-	DUF2946 family protein	NA	NA	NA	NA
WP_002914145.1\|779513_779861_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_039030094.1\|779902_780670_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_039030123.1\|780714_781248_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003863133.1\|781266_781515_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_039030093.1\|781762_783124_-	signal recognition particle protein	NA	NA	NA	NA
WP_039030092.1\|783290_784082_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_039030091.1\|784100_785387_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_072036665.1\|785437_786031_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_039030089.1\|786152_787031_+	NAD(+) kinase	NA	NA	NA	NA
WP_139563397.1\|787116_788778_+	DNA repair protein RecN	NA	NA	NA	NA
WP_039030087.1\|788929_789271_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_139565420.1\|789368_789641_-	RnfH family protein	NA	NA	NA	NA
WP_139563398.1\|789645_790122_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_039030084.1\|790239_790722_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.0e-28	46.2
WP_139563399.1\|791344_792265_+	hypothetical protein	NA	NA	NA	NA
WP_139563400.1\|792726_793200_+	hypothetical protein	NA	NA	NA	NA
WP_139563401.1\|793323_793638_-	hypothetical protein	K7PGV5	Enterobacterial_phage	4.1e-19	49.0
WP_139563402.1\|793637_793877_-	hypothetical protein	K7P7N3	Enterobacteria_phage	2.0e-26	66.7
WP_139563403.1\|793941_794367_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	7.5e-40	58.2
WP_139563404.1\|794967_795549_-	DUF2313 domain-containing protein	O22003	Shigella_phage	3.2e-89	78.2
WP_139563405.1\|795539_796598_-\|plate	baseplate J/gp47 family protein	M1FQW3	Enterobacteria_phage	1.6e-160	76.4
WP_139563406.1\|796590_797010_-\|tail	phage tail protein	U5P0R9	Shigella_phage	1.6e-58	77.7
WP_139563407.1\|797012_797555_-\|plate	phage baseplate assembly protein V	U5P081	Shigella_phage	4.9e-68	70.6
WP_139563408.1\|797554_798625_-\|plate	baseplate protein	U5P0H6	Shigella_phage	5.2e-170	81.6
WP_139563409.1\|798627_798912_-	hypothetical protein	A0A2R4ALX6	Aeromonas_phage	7.8e-09	38.4
WP_139563410.1\|798911_800435_-	hypothetical protein	A0A0F7L427	uncultured_marine_virus	1.3e-25	36.6
WP_139563411.1\|800443_801865_-	DNA circularization protein	M1FPN5	Enterobacteria_phage	2.9e-168	67.7
WP_084832589.1\|801913_802342_-	PH domain-containing protein	A0A249Y2R5	Serratia_phage	1.5e-19	40.9
WP_032675069.1\|802398_804180_-\|tail	phage tail tape measure protein	Q8W620	Enterobacteria_phage	3.5e-115	57.7
WP_071882587.1\|804166_804349_-	hypothetical protein	NA	NA	NA	NA
WP_032675070.1\|804297_804585_-\|tail	phage tail assembly protein	M1FPE4	Enterobacteria_phage	1.3e-22	60.9
WP_032675071.1\|804584_804941_-\|tail	tail protein	A0A192Y8K0	Salmonella_phage	2.8e-48	78.8
WP_139563412.1\|804940_806437_-\|tail	phage tail protein	U5P0H3	Shigella_phage	6.2e-214	74.9
WP_032675073.1\|806433_806616_-	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	7.0e-11	71.1
WP_139563413.1\|806624_807185_-	hypothetical protein	S5FM61	Shigella_phage	1.2e-85	80.6
WP_139563414.1\|807181_807688_-	hypothetical protein	Q8SBH5	Shigella_phage	1.7e-78	85.1
WP_139563415.1\|807662_808076_-\|head	phage head closure protein	M1FJ87	Enterobacteria_phage	2.5e-48	70.1
WP_139563416.1\|808072_808396_-\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	8.0e-34	63.6
WP_139563417.1\|808470_809697_-\|capsid	phage major capsid protein	A0A1W6JP20	Morganella_phage	5.0e-169	76.0
WP_114386596.1\|809706_810306_-\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.8e-87	79.0
WP_139563418.1\|810298_811525_-\|portal	phage portal protein	Q8SBI0	Shigella_phage	6.6e-222	90.7
WP_139563419.1\|811672_813406_-\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	0.0e+00	94.7
WP_139563420.1\|813402_813897_-\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	8.4e-83	92.1
WP_139563421.1\|814027_814378_-	HNH endonuclease	Q8HA82	Salmonella_phage	6.4e-53	80.2
WP_139563422.1\|814472_814673_-	hypothetical protein	K7PHC3	Enterobacterial_phage	1.5e-14	65.1
WP_139563423.1\|814839_815190_-	hypothetical protein	R9TPM9	Aeromonas_phage	3.9e-10	38.8
WP_139563424.1\|815186_815801_-	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	1.2e-91	79.3
WP_032651393.1\|815809_816145_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	9.5e-30	57.0
WP_139563425.1\|816449_816929_+	hypothetical protein	F1C594	Cronobacter_phage	1.6e-38	53.7
WP_139563426.1\|817048_817870_-	antitermination protein	K7P7B9	Enterobacteria_phage	4.1e-58	47.2
WP_139563427.1\|817887_818877_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	6.7e-132	66.6
WP_139563428.1\|818873_819599_-	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	8.9e-57	54.1
WP_139563429.1\|819614_820001_-	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	1.1e-58	83.7
WP_139563430.1\|819997_820246_-	hypothetical protein	NA	NA	NA	NA
WP_139563431.1\|820255_822553_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1B0V7P0	Salmonella_phage	1.2e-184	46.3
WP_139563432.1\|822549_823404_-	GntR family transcriptional regulator	A0A1C9IHW0	Salmonella_phage	4.9e-38	59.4
WP_139563433.1\|823400_823568_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_139563434.1\|823807_824278_-	hypothetical protein	K7PJS5	Enterobacterial_phage	4.4e-73	91.7
WP_139563435.1\|824348_824594_-	helix-turn-helix domain-containing protein	K7PHA1	Enterobacteria_phage	4.7e-18	63.0
WP_139565421.1\|824699_825374_+	LexA family transcriptional regulator	A0A2H4J176	uncultured_Caudovirales_phage	5.7e-50	53.8
WP_114316997.1\|825865_826237_+	hypothetical protein	Q8HAA1	Salmonella_phage	1.2e-44	71.5
WP_139563436.1\|826267_827092_+	DUF2303 family protein	Q8SBF9	Shigella_phage	1.2e-102	68.2
WP_139563437.1\|827224_827761_+	HD family hydrolase	A5LH62	Enterobacteria_phage	1.1e-67	69.7
WP_139563438.1\|827751_828216_+	hypothetical protein	A0A0F6N6A6	Escherichia_phage	1.8e-07	44.3
WP_139563439.1\|828217_828973_+	hypothetical protein	A0A1R3Y5Q7	Salmonella_virus	3.8e-143	93.2
WP_139565422.1\|829334_829682_+	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	1.7e-42	82.3
WP_103822585.1\|829776_829983_+	excisionase	I6PBM8	Cronobacter_phage	1.7e-21	68.9
WP_139563440.1\|829943_831134_+	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	5.6e-149	67.6
WP_139563441.1\|831331_832594_-	allantoate amidohydrolase	NA	NA	NA	NA
WP_138371004.1\|832590_833832_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA
WP_039030081.1\|833847_834585_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-35	42.4

DBSCAN-SWA_3

2541798 : 2607054

uncultured_Caudovirales_phage(20.0%)

tRNA,transposase,protease,integrase

attL 2534627:2534642|attR 2595740:2595755

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2534627:2534642	attL	NA	NA	NA	NA
WP_139564065.1\|2541798_2543151_+\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_039030613.1\|2543205_2543589_+	cytochrome b562	NA	NA	NA	NA
WP_039030612.1\|2543657_2543813_-	Hok/Gef family protein	NA	NA	NA	NA
WP_039030611.1\|2544232_2544571_+	glycine dehydrogenase	NA	NA	NA	NA
WP_032616243.1\|2544581_2544944_+	hypothetical protein	NA	NA	NA	NA
WP_006810338.1\|2544946_2545246_+	DUF4312 family protein	NA	NA	NA	NA
WP_039030609.1\|2545268_2546045_+	DUF4311 domain-containing protein	NA	NA	NA	NA
WP_039030608.1\|2546058_2546700_+	DUF4310 family protein	NA	NA	NA	NA
WP_139564066.1\|2546742_2547876_+	amidohydrolase/deacetylase family metallohydrolase	NA	NA	NA	NA
WP_039030606.1\|2547859_2548978_+	DgaE family pyridoxal phosphate-dependent ammonia lyase	NA	NA	NA	NA
WP_138370111.1\|2548974_2549715_+	KDGP aldolase family protein	NA	NA	NA	NA
WP_139564067.1\|2549815_2550904_+	beta-propeller fold lactonase family protein	NA	NA	NA	NA
WP_139564068.1\|2550923_2552834_+	PRD domain-containing protein	NA	NA	NA	NA
WP_039030603.1\|2552911_2553154_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	A0A2H4JBG1	uncultured_Caudovirales_phage	2.5e-16	52.5
WP_139564069.1\|2553143_2553428_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	A0A2H4JBF4	uncultured_Caudovirales_phage	1.8e-29	66.0
WP_139564070.1\|2553431_2553896_-	anaerobic ribonucleoside-triphosphate reductase-activating protein	K4F9T1	Cronobacter_phage	1.6e-51	55.8
WP_139564071.1\|2554070_2556209_-	anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	5.9e-266	64.2
WP_139564072.1\|2556581_2558237_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_139564073.1\|2558286_2559708_-	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
WP_139564074.1\|2559835_2560783_-	HTH-type transcriptional regulator TreR	C6ZCU4	Enterobacteria_phage	2.7e-13	22.0
WP_139564075.1\|2561170_2563873_+	magnesium-translocating P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	1.4e-43	25.7
WP_139564076.1\|2564084_2566469_+	family 20 glycosylhydrolase	NA	NA	NA	NA
WP_138370118.1\|2566576_2568028_-	N-acetylglucosamine-binding protein GbpA	A0A0K1Y848	Apis_mellifera_filamentous_virus	1.7e-22	36.3
WP_039030594.1\|2568212_2568599_-	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA
WP_039030593.1\|2568671_2569133_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
WP_139564077.1\|2569145_2570078_-	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	3.8e-52	39.9
WP_138370120.1\|2570112_2570217_-	PyrBI operon leader peptide	NA	NA	NA	NA
WP_039030591.1\|2570420_2570873_+	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA
WP_039030590.1\|2571221_2572130_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_139564078.1\|2572145_2574113_+	xylonate dehydratase YagF	NA	NA	NA	NA
WP_139564079.1\|2574341_2575724_+	MFS transporter	NA	NA	NA	NA
WP_139564080.1\|2575736_2577350_+	family 43 glycosylhydrolase	NA	NA	NA	NA
WP_139564081.1\|2577354_2578113_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_139564082.1\|2578306_2579311_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_139564083.1\|2579475_2579901_+	ribonuclease E inhibitor RraB	NA	NA	NA	NA
WP_139564084.1\|2579946_2580705_+\|tRNA	tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE	NA	NA	NA	NA
WP_139564085.1\|2580721_2581441_+	topoisomerase II	NA	NA	NA	NA
WP_139564087.1\|2581839_2583087_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	1.1e-83	40.4
WP_139564089.1\|2583260_2585753_-	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_139564091.1\|2585811_2587047_-	restriction endonuclease	E5E3X4	Burkholderia_phage	1.3e-76	41.7
WP_139564093.1\|2587141_2588578_-	DNA (cytosine-5-)-methyltransferase	E5E3X6	Burkholderia_phage	8.3e-107	51.2
WP_139564095.1\|2589527_2590193_+	hypothetical protein	NA	NA	NA	NA
WP_139564097.1\|2590179_2591301_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_139564099.1\|2591514_2591823_+	hypothetical protein	NA	NA	NA	NA
WP_139564101.1\|2591895_2592468_-	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_088569307.1\|2592643_2593731_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.4e-45	39.2
WP_139564103.1\|2594215_2595805_-	type I restriction-modification system methyltransferase	NA	NA	NA	NA
2595740:2595755	attR	NA	NA	NA	NA
WP_000427620.1\|2599405_2600410_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_139564105.1\|2600930_2601509_-	methyltransferase domain-containing protein	A0A2H4J5G6	uncultured_Caudovirales_phage	4.8e-13	46.2
WP_139564107.1\|2601508_2602522_-	HNH endonuclease	NA	NA	NA	NA
WP_087794475.1\|2602949_2604097_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.8e-148	93.0
WP_139564109.1\|2604231_2605893_+	hypothetical protein	NA	NA	NA	NA
WP_103255452.1\|2605885_2607054_-\|transposase	IS3-like element ISEc52 family transposase	Q716C2	Shigella_phage	3.6e-177	96.1

DBSCAN-SWA_4

4170491 : 4274890

113

Enterobacteria_phage(30.91%)

tRNA,protease,holin,tail,terminase,head,lysis,portal,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139564885.1\|4170491_4171766_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	7.7e-88	43.5
WP_139564886.1\|4171829_4172690_+	pyridoxal kinase PdxY	NA	NA	NA	NA
WP_039029158.1\|4172777_4173383_-	glutathione transferase GstA	NA	NA	NA	NA
WP_039029159.1\|4173491_4175000_-	dipeptide/tripeptide permease DtpA	NA	NA	NA	NA
WP_039029160.1\|4175615_4176251_-	endonuclease III	NA	NA	NA	NA
WP_039029161.1\|4176250_4176934_-	electron transport complex subunit E	NA	NA	NA	NA
WP_139564887.1\|4176936_4177557_-	electron transport complex subunit RsxG	NA	NA	NA	NA
WP_139564888.1\|4177567_4178620_-	electron transport complex subunit RsxD	NA	NA	NA	NA
WP_039029164.1\|4178620_4180738_-	electron transport complex subunit RsxC	NA	NA	NA	NA
WP_139564889.1\|4180730_4181309_-	electron transport complex subunit RsxB	NA	NA	NA	NA
WP_039029166.1\|4181308_4181890_-	electron transport complex subunit RsxA	NA	NA	NA	NA
WP_039029167.1\|4181966_4182407_-	DUF2569 domain-containing protein	NA	NA	NA	NA
WP_039029168.1\|4182490_4182706_-	transcription modulator YdgT	NA	NA	NA	NA
WP_039029169.1\|4182908_4183079_-	division septum protein Blr	NA	NA	NA	NA
WP_138368844.1\|4183311_4184352_+	oxidoreductase	NA	NA	NA	NA
WP_138368845.1\|4184383_4185385_-	adenosine deaminase	NA	NA	NA	NA
WP_139564890.1\|4185481_4186654_-	putative C-S lyase	NA	NA	NA	NA
WP_139564891.1\|4188151_4189432_-	DUF3596 domain-containing protein	B6DZ48	Enterobacteria_phage	8.7e-124	51.2
WP_054830143.1\|4189464_4189713_-	excisionase family protein	S4TND0	Salmonella_phage	4.9e-15	51.4
WP_139564892.1\|4189817_4190003_-	DUF551 domain-containing protein	V5KST2	Escherichia_phage	3.0e-09	47.5
WP_139564893.1\|4190012_4190252_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	4.6e-10	42.9
WP_139564894.1\|4190214_4190934_-	DNA cytosine methyltransferase	Q6UAU0	Klebsiella_phage	2.4e-94	70.2
WP_139564895.1\|4191251_4191548_-	DUF4406 domain-containing protein	A0A222YYT7	Escherichia_phage	3.9e-27	65.2
WP_139564896.1\|4191544_4191763_-	hypothetical protein	NA	NA	NA	NA
WP_139564897.1\|4191759_4192419_-	DNA methyltransferase	G8C7S6	Escherichia_phage	4.6e-121	93.2
WP_139565470.1\|4192415_4192595_-	hypothetical protein	G8C7S7	Escherichia_phage	1.2e-15	76.0
WP_139564898.1\|4192905_4193388_-	siphovirus Gp157 family protein	G8C7S9	Escherichia_phage	3.7e-67	81.2
WP_139564899.1\|4193384_4194281_-	DNA recombinase	G8C7T0	Escherichia_phage	1.8e-120	71.4
WP_139564900.1\|4194304_4194589_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.7e-43	88.3
WP_139565471.1\|4194661_4194859_-	hypothetical protein	NA	NA	NA	NA
WP_032612224.1\|4194890_4195100_-	cell division protein FtsZ	M9NZE2	Enterobacteria_phage	1.6e-27	82.6
WP_139564901.1\|4196520_4196718_+	hypothetical protein	G8C7T7	Escherichia_phage	5.4e-09	45.3
WP_139564902.1\|4196863_4197673_-	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_139565472.1\|4197669_4198497_-	HipA domain-containing protein	NA	NA	NA	NA
WP_139564903.1\|4198614_4199307_-	helix-turn-helix domain-containing protein	G8C7U1	Escherichia_phage	4.9e-97	79.7
WP_062937898.1\|4199412_4199643_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	4.5e-23	68.0
WP_139564904.1\|4199769_4200309_+	regulator	M9NZI6	Enterobacteria_phage	1.5e-64	70.6
WP_139564905.1\|4200556_4201387_+	replication of DNA	K7P7N8	Enterobacteria_phage	3.7e-107	70.3
WP_139564906.1\|4201383_4202751_+	AAA family ATPase	A0A1V0E5J4	Salmonella_phage	2.3e-199	77.5
WP_139564907.1\|4202747_4203080_+	hypothetical protein	NA	NA	NA	NA
WP_139564908.1\|4203076_4203397_+	hypothetical protein	NA	NA	NA	NA
WP_139564909.1\|4203650_4204088_+	recombination protein NinB	G8C7V3	Escherichia_phage	2.6e-59	77.9
WP_139564910.1\|4204087_4204258_+	NinE family protein	G8C7V4	Escherichia_phage	2.3e-16	73.2
WP_139564911.1\|4204250_4204850_+	recombination protein NinG	A0A1P8DTE0	Proteus_phage	2.1e-67	71.1
WP_139564912.1\|4204846_4205230_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	1.3e-19	42.9
WP_139564913.1\|4205226_4205343_+	hypothetical protein	NA	NA	NA	NA
WP_139564914.1\|4205339_4206119_+	antitermination protein	Q76H66	Enterobacteria_phage	1.2e-107	79.8
WP_061353777.1\|4206472_4206871_+	hypothetical protein	NA	NA	NA	NA
WP_113382985.1\|4206867_4207149_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	1.4e-10	41.0
WP_139564915.1\|4207145_4207541_+	M15 family metallopeptidase	E7C9S9	Salmonella_phage	8.5e-62	90.0
WP_139564916.1\|4207537_4207996_+\|lysis	lysis protein	E7C9T0	Salmonella_phage	2.4e-31	55.3
WP_139564917.1\|4208263_4208788_+	Rha family transcriptional regulator	G8C7W4	Escherichia_phage	1.6e-71	75.7
WP_139564918.1\|4208910_4209267_+	HNH endonuclease	A0A1B5FP94	Escherichia_phage	8.2e-48	75.0
WP_139564919.1\|4209283_4209838_+	HNH endonuclease	A0A0A0RV67	Bacillus_phage	2.2e-07	27.6
WP_139564920.1\|4209962_4210436_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	9.2e-71	79.6
WP_139564921.1\|4210435_4212166_+\|terminase	terminase large subunit	K7PKT2	Enterobacteria_phage	8.1e-290	81.3
WP_139564922.1\|4212165_4213470_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	8.9e-217	84.8
WP_139564923.1\|4213481_4214330_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	5.2e-109	74.2
WP_139564924.1\|4214339_4215560_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	1.0e-206	92.4
WP_139564925.1\|4215612_4215798_+	hypothetical protein	K7PHI6	Enterobacteria_phage	1.5e-13	66.2
WP_139564926.1\|4215807_4216134_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	4.7e-26	51.9
WP_012124231.1\|4216130_4216472_+\|head	phage head closure protein	NA	NA	NA	NA
WP_139564927.1\|4216468_4216918_+	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	7.1e-65	85.2
WP_139564928.1\|4216914_4217244_+	DUF3168 domain-containing protein	A0A1P8DTJ3	Proteus_phage	1.1e-22	51.8
WP_015386561.1\|4217302_4217758_+	hypothetical protein	A0A1W6JP06	Morganella_phage	3.6e-56	75.7
WP_103826542.1\|4217808_4218204_+\|tail	phage tail protein	F1C576	Cronobacter_phage	9.1e-56	85.4
WP_103826543.1\|4218227_4218497_+	DUF4035 domain-containing protein	K7PLY6	Enterobacterial_phage	3.4e-22	62.1
WP_139564929.1\|4218622_4222129_+\|tail	phage tail tape measure protein	A0A2H4JHR1	uncultured_Caudovirales_phage	0.0e+00	79.1
WP_103826545.1\|4222128_4222467_+\|tail	phage tail protein	K7PHJ6	Enterobacteria_phage	6.6e-55	88.4
WP_139564930.1\|4222463_4223219_+\|tail	phage minor tail protein L	K7PKU0	Enterobacteria_phage	1.2e-136	92.4
WP_139564931.1\|4223220_4223931_+	peptidase P60	K7PGV2	Enterobacterial_phage	5.0e-145	97.0
WP_139564932.1\|4223960_4224386_+	hypothetical protein	K7PLY8	Enterobacterial_phage	4.6e-13	37.0
WP_139564933.1\|4224441_4225029_+\|tail	tail assembly protein	K7PM69	Enterobacteria_phage	1.4e-73	72.3
WP_139564934.1\|4225066_4225339_+	hypothetical protein	NA	NA	NA	NA
WP_008323354.1\|4225307_4225568_-	hypothetical protein	NA	NA	NA	NA
WP_139564935.1\|4225734_4230645_+	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	9.1e-12	41.9
WP_139564936.1\|4232391_4232694_+	hypothetical protein	NA	NA	NA	NA
WP_139564937.1\|4232705_4233524_+\|tail	tail fiber domain-containing protein	H6WRW6	Salmonella_phage	3.8e-32	38.6
WP_139564938.1\|4233673_4233988_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.1e-19	52.0
WP_139564939.1\|4234500_4235529_+	Mal regulon transcriptional regulator MalI	NA	NA	NA	NA
WP_139564940.1\|4235537_4236428_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_139564941.1\|4236536_4237517_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_139564942.1\|4237532_4238387_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_139564943.1\|4238425_4239988_-	DUF945 family protein	NA	NA	NA	NA
WP_039029179.1\|4240089_4241262_-	mannose-6-phosphate isomerase	NA	NA	NA	NA
WP_139564944.1\|4241461_4243108_+	class I fumarate hydratase	NA	NA	NA	NA
WP_139564945.1\|4243302_4244697_+	class II fumarate hydratase	NA	NA	NA	NA
WP_039029182.1\|4244697_4245627_-	DNA replication terminus site-binding protein	NA	NA	NA	NA
WP_139564946.1\|4245700_4246999_-	two-component system sensor histidine kinase RstB	W8CYF6	Bacillus_phage	3.2e-17	24.2
WP_039029184.1\|4247078_4247849_-	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	4.1e-12	24.3
WP_139565473.1\|4248179_4248590_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_139564947.1\|4248729_4249446_-	two-component system response regulator RstA	NA	NA	NA	NA
WP_039029187.1\|4249574_4249910_+	GlpM family protein	NA	NA	NA	NA
WP_138368855.1\|4249906_4250629_-	dihydromonapterin reductase	NA	NA	NA	NA
WP_139564948.1\|4250668_4252051_-	amino acid permease	NA	NA	NA	NA
WP_039029190.1\|4252236_4253190_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_139564949.1\|4253726_4255256_+	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA	NA	NA	NA
WP_039029192.1\|4255266_4256655_+	Re/Si-specific NAD(P)(+) transhydrogenase subunit beta	NA	NA	NA	NA
WP_138368857.1\|4256769_4257888_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_039029194.1\|4259841_4260792_-	universal stress protein UspE	NA	NA	NA	NA
WP_032617879.1\|4260928_4261681_-	FNR family transcription factor	NA	NA	NA	NA
WP_139564950.1\|4261863_4262379_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	5.4e-24	44.3
WP_139564951.1\|4262389_4263916_-	p-aminobenzoyl-glutamate transporter	NA	NA	NA	NA
WP_139564952.1\|4263963_4265409_-	amidohydrolase	NA	NA	NA	NA
WP_139564953.1\|4265408_4266719_-	amidohydrolase	NA	NA	NA	NA
WP_139564954.1\|4266893_4267802_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_138368863.1\|4268158_4268722_+	DNA endonuclease SmrA	NA	NA	NA	NA
WP_139564955.1\|4268734_4269679_+	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_139564956.1\|4269682_4270720_-	AI-2E family transporter	NA	NA	NA	NA
WP_039029203.1\|4271139_4271502_+	multidrug/spermidine efflux SMR transporter subunit MdtJ	NA	NA	NA	NA
WP_139564957.1\|4271488_4271818_+	multidrug/spermidine efflux SMR transporter subunit MdtI	NA	NA	NA	NA
WP_138368866.1\|4271904_4274067_+	bifunctional diguanylate cyclase/phosphodiesterase	G3MA91	Bacillus_virus	2.5e-14	28.8
WP_039029206.1\|4274068_4274890_-\|protease	serine protease	NA	NA	NA	NA

DBSCAN-SWA_5

4312378 : 4382779

Escherichia_phage(44.68%)

holin,tail,coat,transposase,terminase,integrase

attL 4301572:4301588|attR 4382226:4382242

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4301572:4301588	attL	NA	NA	NA	NA
WP_139564979.1\|4312378_4313710_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_009653620.1\|4314059_4316087_+	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_009653617.1\|4316083_4317418_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_009653619.1\|4317418_4320676_+	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_009653618.1\|4320680_4321949_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	5.2e-60	34.7
WP_139564980.1\|4322294_4322774_+	hypothetical protein	NA	NA	NA	NA
WP_139565474.1\|4323399_4324137_+	KilA-N domain-containing protein	NA	NA	NA	NA
WP_139564981.1\|4324138_4324345_+	hypothetical protein	NA	NA	NA	NA
WP_139564982.1\|4325041_4326031_+	hypothetical protein	NA	NA	NA	NA
WP_139564983.1\|4326701_4328162_-	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	5.5e-122	49.7
WP_103824474.1\|4328310_4328616_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_139564984.1\|4328716_4329427_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_139564985.1\|4329466_4329796_-	DUF1283 family protein	NA	NA	NA	NA
WP_039029242.1\|4329943_4330270_+	YnfA family protein	A0A218MNG8	uncultured_virus	9.3e-22	54.5
WP_139563168.1\|4331115_4332283_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	3.6e-177	96.1
WP_139564986.1\|4332714_4333404_+	phage replication protein	G8C7U6	Escherichia_phage	6.0e-79	60.7
WP_139564987.1\|4333416_4334106_+	DUF1627 domain-containing protein	A0A088CE47	Shigella_phage	3.6e-15	26.9
WP_139564988.1\|4334095_4334407_+	hypothetical protein	NA	NA	NA	NA
WP_139564989.1\|4334403_4335024_+	hypothetical protein	H6WRY2	Salmonella_phage	5.5e-15	43.9
WP_139564990.1\|4335157_4335697_+	hypothetical protein	NA	NA	NA	NA
WP_139564991.1\|4335895_4336183_-	hypothetical protein	NA	NA	NA	NA
WP_139564992.1\|4337257_4337854_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	1.1e-100	91.3
WP_114315063.1\|4337858_4338059_+	hypothetical protein	S4TNP0	Salmonella_phage	2.2e-13	53.0
WP_139564993.1\|4338061_4338667_+	recombination protein NinG	A0A1P8DTE0	Proteus_phage	1.7e-53	64.8
WP_114315061.1\|4338663_4338804_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	6.1e-07	73.7
WP_139564994.1\|4338800_4339583_+	antitermination protein	K7PKS8	Enterobacteria_phage	2.7e-107	73.6
WP_103179507.1\|4340518_4340704_+	hypothetical protein	NA	NA	NA	NA
WP_103179202.1\|4340865_4341189_+	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_139564995.1\|4341690_4341936_+	hypothetical protein	NA	NA	NA	NA
WP_087794475.1\|4341937_4343085_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.8e-148	93.0
WP_139564996.1\|4343317_4343596_+\|holin	phage holin family protein	A0A0A0YPY6	Escherichia_phage	2.8e-11	42.5
WP_139564997.1\|4343592_4344135_+	hypothetical protein	A0A0U2I1S0	Escherichia_phage	4.9e-76	72.3
WP_139564998.1\|4344131_4344404_+	hypothetical protein	G8C7W1	Escherichia_phage	9.2e-07	42.9
WP_139564999.1\|4344360_4344558_+	hypothetical protein	K7PM01	Enterobacterial_phage	3.6e-13	70.0
WP_139565000.1\|4344703_4345039_+	hypothetical protein	S0A240	Cellulophaga_phage	2.9e-10	36.5
WP_139565001.1\|4345120_4345732_-	hypothetical protein	NA	NA	NA	NA
WP_139565002.1\|4345840_4346924_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.5e-44	46.6
WP_139565003.1\|4346950_4347523_+\|terminase	terminase small subunit	I6PDJ6	Cronobacter_phage	5.9e-64	79.9
WP_139565004.1\|4347519_4349091_+\|terminase	terminase	G8C7P3	Escherichia_phage	9.5e-306	92.4
WP_139565005.1\|4349095_4350499_+	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	2.3e-242	90.3
WP_139565006.1\|4350500_4351607_+	hypothetical protein	G8C7P5	Escherichia_phage	3.0e-189	90.8
WP_032617992.1\|4351610_4351820_+	hypothetical protein	A0A2H4J0Y9	uncultured_Caudovirales_phage	2.2e-16	60.6
WP_139565007.1\|4351926_4352679_+	hypothetical protein	G8C7P6	Escherichia_phage	6.3e-114	84.8
WP_032617994.1\|4352695_4353832_+\|coat	coat protein	G8C7P7	Escherichia_phage	5.4e-194	92.1
WP_139565008.1\|4354215_4354698_+	hypothetical protein	G8C7P9	Escherichia_phage	5.7e-76	83.1
WP_139565009.1\|4354699_4355053_+	hypothetical protein	G8C7Q0	Escherichia_phage	6.0e-51	88.0
WP_139565010.1\|4355055_4355655_+	hypothetical protein	G8C7Q1	Escherichia_phage	8.6e-98	87.9
WP_139565011.1\|4355644_4356094_+	hypothetical protein	G8C7Q2	Escherichia_phage	1.4e-73	90.6
WP_103792442.1\|4356140_4357073_+\|tail	phage tail protein	G8C7Q3	Escherichia_phage	7.4e-157	92.6
WP_103792441.1\|4357114_4357453_+	hypothetical protein	G8C7Q5	Escherichia_phage	8.3e-50	84.8
WP_103792440.1\|4357470_4357758_+	hypothetical protein	I6PD79	Cronobacter_phage	6.4e-19	64.6
WP_139565012.1\|4357757_4360811_+\|tail	phage tail tape measure protein	G8C7Q6	Escherichia_phage	0.0e+00	72.7
WP_139565013.1\|4360907_4361735_+	hypothetical protein	A0A2H4J8D6	uncultured_Caudovirales_phage	6.6e-56	50.6
WP_139565475.1\|4361997_4362369_-	hypothetical protein	A0A077K9U2	Edwardsiella_phage	2.3e-16	40.7
WP_139565014.1\|4364039_4364813_+\|tail	phage minor tail protein L	G8C7R1	Escherichia_phage	6.2e-133	88.3
WP_139565015.1\|4364825_4365557_+	peptidase P60	G8C7R2	Escherichia_phage	3.1e-142	90.5
WP_139565016.1\|4366173_4370340_+	DUF1983 domain-containing protein	G8C7R4	Escherichia_phage	5.2e-16	43.3
WP_139565017.1\|4370391_4370823_+	hypothetical protein	NA	NA	NA	NA
WP_139565018.1\|4370928_4371459_-	hypothetical protein	NA	NA	NA	NA
WP_139565019.1\|4371457_4372654_+	hypothetical protein	A0A0F7L427	uncultured_marine_virus	1.4e-27	37.2
WP_139565020.1\|4372653_4372956_+	hypothetical protein	NA	NA	NA	NA
WP_139565021.1\|4372946_4373966_+\|tail	tail fiber domain-containing protein	O64338	Escherichia_phage	9.3e-44	49.0
WP_139565022.1\|4374415_4374952_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_139565023.1\|4374982_4375408_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.6e-48	69.3
WP_139565024.1\|4375420_4376710_-	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	3.8e-167	70.4
WP_139565025.1\|4376754_4377075_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	1.2e-21	47.6
WP_114387384.1\|4377160_4377859_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	2.2e-89	68.5
WP_139565026.1\|4378137_4379433_+	MFS transporter	Q6JIH2	Burkholderia_virus	2.9e-26	26.3
WP_138368889.1\|4379553_4381098_+	MFS transporter	NA	NA	NA	NA
WP_139565027.1\|4381315_4382779_+	fructuronate reductase	H8ZJP8	Ostreococcus_tauri_virus	3.0e-43	33.0
4382226:4382242	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP040893

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 70888

Escherichia_phage(68.0%)

holin,head,portal,lysis,tail,plate,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139565500.1\|769_949_-	hypothetical protein	NA	NA	NA	NA
WP_139565501.1\|1055_1298_-	hypothetical protein	NA	NA	NA	NA
WP_139565502.1\|1362_1944_-	VRR-NUC domain-containing protein	A0A1B0VBR8	Salmonella_phage	1.9e-46	51.1
WP_139565503.1\|2491_2671_-	hypothetical protein	NA	NA	NA	NA
WP_139565504.1\|2832_3087_-	hypothetical protein	NA	NA	NA	NA
WP_139565505.1\|3096_3531_-	olxA	A0A222YZ35	Escherichia_phage	4.8e-42	59.4
WP_139565507.1\|3566_10409_-	N-6 DNA methylase	A0A222YYH3	Escherichia_phage	0.0e+00	52.6
WP_139565508.1\|10496_12182_+\|portal	phage portal protein	A0A222YXQ7	Escherichia_phage	2.6e-200	62.6
WP_139565510.1\|12192_13218_+\|head	head processing protein	A0A222YWA7	Escherichia_phage	9.8e-102	58.1
WP_139565512.1\|13804_14722_+	hypothetical protein	NA	NA	NA	NA
WP_139565514.1\|14750_15242_-	TIGR02594 family protein	A0A222YWL8	Escherichia_phage	7.6e-60	70.9
WP_139565516.1\|15331_15622_-	hypothetical protein	Q1MVN0	Enterobacteria_phage	2.3e-08	38.0
WP_139565518.1\|18754_19093_-	ddrA	NA	NA	NA	NA
WP_139565519.1\|19089_21030_-\|head	head protein	A0A1B0V7H1	Salmonella_phage	3.4e-119	41.4
WP_139565642.1\|21026_21653_-	hypothetical protein	A0A222YXB2	Escherichia_phage	1.6e-41	60.5
WP_139565521.1\|21639_22095_-\|lysis	lysis protein	A0A222YXP5	Escherichia_phage	1.7e-34	49.3
WP_139565523.1\|22091_22406_-\|holin	holin	A0A222YZ46	Escherichia_phage	3.3e-16	46.3
WP_139565525.1\|22912_23200_-	hypothetical protein	NA	NA	NA	NA
WP_139565527.1\|23199_26148_-	hypothetical protein	A0A0E3M0V5	Enterobacteria_phage	3.8e-37	31.5
WP_139565528.1\|26158_26440_-	hypothetical protein	NA	NA	NA	NA
WP_139565530.1\|26439_28575_-	hypothetical protein	A0A222YWB9	Escherichia_phage	1.3e-39	38.9
WP_139565644.1\|28571_28727_-\|tail	phage tail protein	A0A222YXS1	Escherichia_phage	3.5e-11	71.7
WP_139565532.1\|30901_32350_-\|plate	baseplate protein	A0A222YWB2	Escherichia_phage	3.3e-143	54.0
WP_139565534.1\|32358_32721_-	hypothetical protein	A0A222YXD0	Escherichia_phage	2.7e-30	52.1
WP_139565535.1\|32723_37247_-	hypothetical protein	A0A222YXR4	Escherichia_phage	1.0e-86	30.0
WP_139565536.1\|37363_38182_-	hypothetical protein	A0A222YZ63	Escherichia_phage	2.3e-93	60.4
WP_139565538.1\|38376_39075_-\|tail	phage tail protein	A0A222YY05	Escherichia_phage	9.4e-64	55.5
WP_139565540.1\|39177_39729_-	hypothetical protein	A0A222YWE3	Escherichia_phage	1.2e-53	59.9
WP_139565542.1\|39733_40225_-\|plate	baseplate protein	A0A222YWE4	Escherichia_phage	1.9e-71	74.8
WP_139565543.1\|40300_40891_-	hypothetical protein	A0A222YY02	Escherichia_phage	3.6e-64	62.6
WP_139565645.1\|40940_41648_-	hypothetical protein	A0A222YXT7	Escherichia_phage	8.7e-33	42.7
WP_139565545.1\|41663_43247_-\|tail	phage tail protein	A0A222YWC8	Escherichia_phage	5.1e-174	57.0
WP_139565547.1\|43287_45039_-\|capsid	capsid protein	A0A222YWC7	Escherichia_phage	7.3e-206	62.6
WP_139565548.1\|45100_45595_+	hypothetical protein	NA	NA	NA	NA
WP_139565549.1\|45711_46146_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.2e-27	48.5
WP_139565551.1\|46145_47417_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	3.2e-150	61.1
WP_139565552.1\|47904_48771_+	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	2.0e-116	71.6
WP_139565553.1\|48846_49782_+	hypothetical protein	NA	NA	NA	NA
WP_139565555.1\|49943_50456_-	hypothetical protein	A0A222YWG1	Escherichia_phage	1.7e-09	34.3
WP_139565556.1\|50458_51226_-	hypothetical protein	A0A222YXK1	Escherichia_phage	2.5e-25	32.7
WP_139565558.1\|51225_51510_-	alanine racemase	Q1MVI7	Enterobacteria_phage	1.2e-30	66.0
WP_139565559.1\|51595_51970_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_139565561.1\|52118_52373_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5NR91	Burkholderia_phage	4.1e-09	35.4
WP_139565646.1\|52646_52799_+	hypothetical protein	NA	NA	NA	NA
WP_139565563.1\|52840_53092_+	hypothetical protein	NA	NA	NA	NA
WP_139565565.1\|53201_53828_+	AAA family ATPase	E5FFJ3	Burkholderia_phage	5.0e-16	26.8
WP_139565567.1\|53824_54115_+	hypothetical protein	NA	NA	NA	NA
WP_139565568.1\|54259_54712_+	hypothetical protein	NA	NA	NA	NA
WP_139565570.1\|54849_55473_-	adenylosuccinate synthase	A0A1I9KFG5	Aeromonas_phage	1.6e-54	50.2
WP_139565647.1\|55469_57566_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	Q1MVI4	Enterobacteria_phage	2.3e-190	49.2
WP_139565572.1\|57562_58798_-	site-specific DNA-methyltransferase	A0A1P8DTZ3	Salmonella_phage	4.8e-87	45.7
WP_139565574.1\|58769_59678_-	recombination-associated protein RdgC	A0A222YY21	Escherichia_phage	1.9e-85	50.3
WP_139565648.1\|59742_60348_-\|plate	baseplate protein	A0A222YWF1	Escherichia_phage	5.7e-65	76.9
WP_139565576.1\|60391_61372_-\|tail	tail length tape measure protein	A0A222YXZ0	Escherichia_phage	1.7e-103	53.7
WP_139565578.1\|61374_62139_-\|plate	baseplate	A0A222YWF4	Escherichia_phage	5.1e-63	51.4
WP_139565580.1\|62135_62870_-\|tail	phage tail protein	A0A222YXU3	Escherichia_phage	5.6e-59	51.5
WP_139565582.1\|62866_64072_-\|tail	phage tail protein	A0A222YXT1	Escherichia_phage	5.5e-120	62.1
WP_139565584.1\|64064_64391_-\|plate	baseplate protein	A0A222YYR0	Escherichia_phage	2.3e-36	67.0
WP_139565585.1\|64387_65044_-	maturation control protein	A0A222YZ79	Escherichia_phage	1.4e-61	54.2
WP_139565587.1\|65217_65451_-	hypothetical protein	NA	NA	NA	NA
WP_139565649.1\|65450_65951_-	recombination enhancement function domain protein	Q71TG3	Escherichia_phage	1.6e-36	59.1
WP_139565588.1\|66200_66731_+	polynucleotide kinase	E1Y3U0	Pantoea_phage	1.6e-26	44.8
WP_139565590.1\|66754_67105_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_139565592.1\|67101_67803_+	hypothetical protein	Q71T76	Escherichia_phage	2.6e-77	58.0
WP_139565594.1\|67799_68114_+	hypothetical protein	A0A1P8DTU9	Salmonella_phage	3.0e-38	67.3
WP_139565596.1\|68110_68752_+	hypothetical protein	Q1MVG0	Enterobacteria_phage	3.3e-87	65.7
WP_139565598.1\|68748_69066_+	hypothetical protein	NA	NA	NA	NA
WP_139565650.1\|69122_69350_+	hypothetical protein	NA	NA	NA	NA
WP_139565600.1\|69339_69576_+	hypothetical protein	NA	NA	NA	NA
WP_139565601.1\|69578_69977_+	hypothetical protein	NA	NA	NA	NA
WP_139565602.1\|69960_70233_+	hypothetical protein	NA	NA	NA	NA
WP_139565604.1\|70232_70523_+	hypothetical protein	NA	NA	NA	NA
WP_139565605.1\|70519_70888_+	hypothetical protein	G8CTB7	Vibrio_phage	3.7e-11	43.8

DBSCAN-SWA_2

77172 : 81525

Enterobacteria_phage(66.67%)

terminase,integrase

attL 75786:75803|attR 82836:82853

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
75786:75803	attL	NA	NA	NA	NA
WP_139565622.1\|77172_77493_-	hypothetical protein	A0A222YYS6	Escherichia_phage	1.6e-10	36.8
WP_139565652.1\|77573_78506_-\|integrase	tyrosine-type recombinase/integrase	Q5QBN6	Enterobacteria_phage	2.4e-62	44.4
WP_139565623.1\|78995_80030_+	hypothetical protein	NA	NA	NA	NA
WP_139565653.1\|80061_81525_-\|terminase	terminase	Q5QBP2	Enterobacteria_phage	1.1e-157	57.2
82836:82853	attR	NA	NA	NA	NA

DBSCAN-SWA_3

85662 : 87746

Erwinia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139565634.1\|85662_85944_-	hypothetical protein	A0A1S6L2Z2	Erwinia_phage	5.9e-09	43.9
WP_139565636.1\|86288_87002_-	hypothetical protein	NA	NA	NA	NA
WP_139565638.1\|87269_87746_-	hypothetical protein	A0A2I7R6T4	Vibrio_phage	7.4e-12	36.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_CP040895

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2995 : 51499

Escherichia_phage(41.18%)

integrase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067855.1\|2995_3700_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_111969876.1\|3952_4171_+	hypothetical protein	NA	NA	NA	NA
WP_047352390.1\|4123_5545_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	6.2e-30	30.4
WP_017341082.1\|6062_7355_-	group II intron reverse transcriptase/maturase	H7BVN7	unidentified_phage	6.3e-21	26.6
WP_077750296.1\|8086_9412_-	OprD family porin	NA	NA	NA	NA
WP_111969894.1\|10222_10612_-	plasmid stability protein	A0A222YWJ6	Escherichia_phage	5.0e-06	39.0
WP_095661882.1\|10683_11956_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.4e-145	81.4
WP_111969896.1\|13153_13789_+	AAA family ATPase	A0A222YXS3	Escherichia_phage	4.0e-45	46.9
WP_111969897.1\|13790_14084_+	hypothetical protein	NA	NA	NA	NA
WP_111969898.1\|14238_15018_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	2.7e-51	89.4
WP_111969899.1\|15014_15836_-	hypothetical protein	NA	NA	NA	NA
WP_139565671.1\|16794_18603_-	DUF87 domain-containing protein	NA	NA	NA	NA
WP_139565672.1\|18599_19646_-	hypothetical protein	NA	NA	NA	NA
WP_039032651.1\|20001_20232_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_103793600.1\|20228_20645_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_103793601.1\|20833_21160_+	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_103793602.1\|22455_22641_+	general stress protein	NA	NA	NA	NA
WP_139565673.1\|24120_24357_+	glycogen synthase	NA	NA	NA	NA
WP_001067855.1\|24302_25007_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_032650439.1\|25103_25709_+	hypothetical protein	NA	NA	NA	NA
WP_080298889.1\|25753_26332_-	DUF2913 family protein	NA	NA	NA	NA
WP_080298888.1\|26367_26823_-	hypothetical protein	NA	NA	NA	NA
WP_139565674.1\|27976_28840_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_139565675.1\|29133_29334_-	hypothetical protein	NA	NA	NA	NA
WP_139565676.1\|29997_30270_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_001067855.1\|30306_31011_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_092234813.1\|31191_31518_+	hypothetical protein	NA	NA	NA	NA
WP_139565677.1\|32885_34154_-	hypothetical protein	NA	NA	NA	NA
WP_072657383.1\|34822_35740_+\|transposase	IS5-like element ISEc35 family transposase	A0A1V0E8E1	Vibrio_phage	3.3e-101	59.5
WP_139565678.1\|36611_36785_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_000427623.1\|37049_38054_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_003100881.1\|38132_41099_-\|transposase	Tn3-like element ISPa38 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.2
WP_001247892.1\|41257_41548_+	nucleotidyltransferase	NA	NA	NA	NA
WP_001293886.1\|41544_41946_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_003465043.1\|41935_42292_+	cupin domain-containing protein	NA	NA	NA	NA
WP_003100858.1\|42546_42873_+	hypothetical protein	NA	NA	NA	NA
WP_003100856.1\|42869_43370_+	hypothetical protein	NA	NA	NA	NA
WP_003100853.1\|43366_43738_+	hypothetical protein	NA	NA	NA	NA
WP_003100847.1\|43731_44289_+	recombinase family protein	A0A0C4UR34	Shigella_phage	3.3e-59	63.2
WP_001067855.1\|44477_45182_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_004163135.1\|45072_46032_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.7e-47	40.5
WP_015060105.1\|46184_46925_+	subclass B1 metallo-beta-lactamase IMP-4	NA	NA	NA	NA
WP_044067521.1\|47014_48364_-	group II intron reverse transcriptase/maturase	H7BV81	unidentified_phage	3.3e-12	28.3
WP_139565679.1\|48386_48587_-	hypothetical protein	NA	NA	NA	NA
WP_097432954.1\|48497_49617_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	4.1e-45	40.5
WP_001144737.1\|50325_50592_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_001389365.1\|50734_51499_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_CP040888

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

118172 : 157187

Stx2-converting_phage(27.27%)

transposase,integrase

attL 115241:115254|attR 160171:160184

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
115241:115254	attL	NA	NA	NA	NA
WP_139563066.1\|118172_119420_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_007897920.1\|119406_121173_+	hypothetical protein	NA	NA	NA	NA
WP_017384059.1\|121160_123278_+	hypothetical protein	NA	NA	NA	NA
WP_017384060.1\|123281_123710_+	hypothetical protein	NA	NA	NA	NA
WP_088728459.1\|123800_124947_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	6.6e-147	92.2
WP_017384068.1\|125295_126429_+	alcohol dehydrogenase catalytic domain-containing protein	E3SJ82	Synechococcus_phage	1.7e-09	28.9
WP_003846919.1\|127283_127454_-	hypothetical protein	NA	NA	NA	NA
WP_003846917.1\|127510_128764_-	lactose permease	NA	NA	NA	NA
WP_007894989.1\|128815_131890_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.8
WP_007851507.1\|132008_133091_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	6.5e-189	98.1
WP_007901308.1\|134684_135608_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	1.5e-173	97.4
WP_016151369.1\|137770_138121_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	9.6e-41	65.5
WP_000227969.1\|139660_140737_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_012561110.1\|141323_142160_-	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_012561111.1\|142224_142623_-	VOC family protein	NA	NA	NA	NA
WP_017384070.1\|142666_143776_-	S-(hydroxymethyl)glutathione dehydrogenase	E3SJ82	Synechococcus_phage	4.9e-30	28.3
WP_017384071.1\|143810_144086_-	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA
WP_021567584.1\|146706_147057_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	3.3e-41	66.4
WP_048242260.1\|147053_147461_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	5.2e-14	37.0
WP_017384073.1\|147934_148231_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_139563067.1\|149089_151543_+	hypothetical protein	NA	NA	NA	NA
WP_045892447.1\|151551_152364_+	hypothetical protein	NA	NA	NA	NA
WP_000140246.1\|152568_152898_+	hypothetical protein	NA	NA	NA	NA
WP_001180999.1\|154713_154953_+	hypothetical protein	NA	NA	NA	NA
WP_000172888.1\|155015_155327_+	hypothetical protein	NA	NA	NA	NA
WP_000159617.1\|155323_155518_+	hypothetical protein	NA	NA	NA	NA
WP_000241452.1\|155572_156106_+	HNH endonuclease	E7EKU5	Edwardsiella_phage	6.8e-46	65.2
WP_134871661.1\|156266_157187_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.2e-172	98.7
160171:160184	attR	NA	NA	NA	NA

DBSCAN-SWA_2

215292 : 233287

uncultured_Caudovirales_phage(75.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_119735251.1\|215292_216273_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	99.1
WP_001118616.1\|216455_217379_-\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	1.1e-176	99.3
WP_001100610.1\|218016_218322_-	hypothetical protein	NA	NA	NA	NA
WP_000785965.1\|218344_218662_-	hypothetical protein	NA	NA	NA	NA
WP_001567368.1\|218876_220280_+\|transposase	ISNCY-like element ISKpn21 family transposase	NA	NA	NA	NA
WP_001567369.1\|220308_220941_-	hypothetical protein	NA	NA	NA	NA
WP_058687697.1\|221138_222542_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_000130816.1\|222574_223279_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	8.8e-86	72.9
WP_000941305.1\|223365_223686_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	1.7e-20	53.7
WP_054628791.1\|223731_225021_+	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	5.8e-168	71.4
WP_000065802.1\|225033_225459_+	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.6e-50	70.7
WP_001066652.1\|225518_226346_-	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	4.9e-43	37.2
WP_139563070.1\|226364_227843_-	STAS domain-containing protein	A0A2H4J153	uncultured_Caudovirales_phage	3.3e-199	74.6
WP_008786701.1\|228332_229736_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_032941654.1\|229766_230633_-	hypothetical protein	NA	NA	NA	NA
WP_008786703.1\|230687_231686_-	hypothetical protein	NA	NA	NA	NA
WP_080398136.1\|231940_233287_+\|transposase	ISNCY family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

273268 : 317006

Shigella_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000427623.1\|273268_274273_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_003100847.1\|274351_274909_-	recombinase family protein	A0A0C4UR34	Shigella_phage	3.3e-59	63.2
WP_021243030.1\|274902_275274_-	hypothetical protein	NA	NA	NA	NA
WP_003100856.1\|275270_275771_-	hypothetical protein	NA	NA	NA	NA
WP_003100858.1\|275767_276094_-	hypothetical protein	NA	NA	NA	NA
WP_003465043.1\|276348_276705_-	cupin domain-containing protein	NA	NA	NA	NA
WP_001293886.1\|276694_277096_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_001247892.1\|277092_277383_-	nucleotidyltransferase	NA	NA	NA	NA
WP_001173919.1\|277517_278093_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	5.6e-46	52.7
WP_021140470.1\|278219_278648_-	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA
WP_004099027.1\|279247_279736_+	DUF417 family protein	NA	NA	NA	NA
WP_004357657.1\|279794_279977_+	hypothetical protein	NA	NA	NA	NA
WP_026227539.1\|280212_280788_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004357654.1\|281184_282210_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_025760400.1\|282209_282803_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_004357650.1\|282805_284038_-	OsmC family protein	NA	NA	NA	NA
WP_018716209.1\|284182_285142_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004099035.1\|285288_285732_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_004099036.1\|285733_286273_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_004099038.1\|286405_287110_+	glutathione S-transferase	NA	NA	NA	NA
WP_011191347.1\|287106_288075_+	magnesium and cobalt transport protein CorA	NA	NA	NA	NA
WP_004099040.1\|288166_288739_+	hypothetical protein	NA	NA	NA	NA
WP_004099042.1\|288826_289276_+	hypothetical protein	NA	NA	NA	NA
WP_004099044.1\|289382_289784_+	hypothetical protein	NA	NA	NA	NA
WP_094935733.1\|289814_291086_-	MFS transporter	NA	NA	NA	NA
WP_004357637.1\|291073_291586_-	DM13 domain-containing protein	NA	NA	NA	NA
WP_011191345.1\|291589_292060_-	hypothetical protein	NA	NA	NA	NA
WP_011191344.1\|292211_292502_-	DUF1330 domain-containing protein	NA	NA	NA	NA
WP_004357630.1\|292564_292996_-	heme-binding protein	NA	NA	NA	NA
WP_011191343.1\|293069_294080_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_011191342.1\|294689_295958_-\|transposase	IS4-like element ISApu1 family transposase	NA	NA	NA	NA
WP_004099020.1\|296275_296647_-	hypothetical protein	NA	NA	NA	NA
WP_002123001.1\|301068_302004_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_069785042.1\|302126_302615_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_011711657.1\|302642_302879_+	glutaredoxin	A0A248SKD6	Salicola_phage	2.6e-05	37.0
WP_005403705.1\|302910_303351_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_011711656.1\|303405_303651_+	hypothetical protein	NA	NA	NA	NA
WP_001281573.1\|303856_304519_+	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA
WP_002119794.1\|304738_305716_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.7e-18	35.0
WP_001809438.1\|305898_306930_+\|transposase	IS630-like element ISAhy2 family transposase	NA	NA	NA	NA
WP_069785045.1\|306941_307631_-	ATP-binding protein	NA	NA	NA	NA
WP_094762227.1\|308278_308851_-	peptide methionine sulfoxide reductase	NA	NA	NA	NA
WP_011711652.1\|308847_309348_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_011711653.1\|309350_309797_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_011711654.1\|310033_310549_-	DUF417 family protein	NA	NA	NA	NA
WP_011711655.1\|310686_311241_-	hypothetical protein	NA	NA	NA	NA
WP_021141311.1\|311623_312760_-\|transposase	ISAs1-like element ISAs12 family transposase	NA	NA	NA	NA
WP_094935932.1\|313071_314103_-\|transposase	IS630-like element ISAhy2 family transposase	NA	NA	NA	NA
WP_000427623.1\|316001_317006_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage