CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP040826	Enterobacter cloacae strain NH77 plasmid pEcloNH77, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP040827	Enterobacter cloacae strain NH77 chromosome, complete genome	3 crisprs	DEDDh,cas3,csa3,DinG,WYL,RT	2	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP040827_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040827_1

1193861-1193938

Orphan

Consensus_repeat	Method
AGGGCTGAGGGTTCCCCACAAAA	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP040827_1

>merge|NZ_CP040827|1|1193861-1193938|CRISPRCasFinder
AGGGCTGAGGGTTCCCCACAAAATAATGCCTGCACGGAGGACCCCCTCTCCCTTGAGGGCTGAGGGTTCCCCAGAAAA

>NZ_CP040827|1|1|1193861-1193938|CRISPRCasFinder
AGGGCTGAGGGTTCCCCACAAAA	TAATGCCTGCACGGAGGACCCCCTCTCCCTTG
AGGGCTGAGGGTTCCCCAGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040827.1\|WP_129327610.1\|1197302_1198421_-\|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|369642
NZ_CP040827.1\|WP_013097439.1\|1208158_1208911_+\|molybdopterin-synthase-adenylyltransferase-MoeB	unknown	unknown	gnl\|CDD\|180204
NZ_CP040827.1\|WP_129327611.1\|1190248_1191481_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|185300
NZ_CP040827.1\|WP_013097432.1\|1199126_1200452_+\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	unknown	unknown	gnl\|CDD\|237838
NZ_CP040827.1\|WP_028027952.1\|1208973_1209636_-\|fructose-6-phosphate-aldolase	unknown	unknown	gnl\|CDD\|183653
NZ_CP040827.1\|WP_020689884.1\|1192384_1192993_+\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|183335
NZ_CP040827.1\|WP_129327612.1\|1185792_1187082_+\|arsenic-transporter	unknown	unknown	gnl\|CDD\|185342
NZ_CP040827.1\|WP_023620242.1\|1188174_1189389_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340951
NZ_CP040827.1\|WP_151347636.1\|1185436_1185757_+\|metalloregulator-ArsR/SmtB-family-transcription-factor	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|236654
NZ_CP040827.1\|WP_129327614.1\|1184937_1185207_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040827.1\|WP_013097418.1\|1187094_1187526_+\|arsenate-reductase-(glutaredoxin)	unknown	unknown	gnl\|CDD\|182200
NZ_CP040827.1\|WP_023620241.1\|1189378_1190191_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223635
NZ_CP040827.1\|WP_151347637.1\|1195229_1196435_-\|serine-type-D-Ala-D-Ala-carboxypeptidase	unknown	unknown	gnl\|CDD\|182189
NZ_CP040827.1\|WP_029882876.1\|1191648_1192377_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|226422
NZ_CP040827.1\|WP_013097430.1\|1198526_1198910_-\|biofilm-formation-regulator-BssR	unknown	unknown	gnl\|CDD\|183420
NZ_CP040827.1\|WP_129327608.1\|1203914_1205786_-\|glutathione-ABC-transporter-ATP-binding-protein-GsiA	unknown	unknown	gnl\|CDD\|182342
NZ_CP040827.1\|WP_020689875.1\|1205797_1206736_-\|beta-aspartyl-peptidase	unknown	unknown	gnl\|CDD\|182319
NZ_CP040827.1\|WP_038418989.1\|1193060_1193819_+\|DNA-binding-transcriptional-repressor-DeoR	unknown	unknown	gnl\|CDD\|182644
NZ_CP040827.1\|WP_013097435.1\|1202352_1203891_-\|glutathione-ABC-transporter-substrate-binding-protein-GsiB	unknown	unknown	gnl\|CDD\|185311
NZ_CP040827.1\|WP_013095093.1\|1193999_1195175_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573

Protein	Function_ID	Function_description	E-value
NZ_CP040827.1\|WP_129327610.1\|1197302_1198421_-\|PQQ-dependent-sugar-dehydrogenase	gnl\|CDD\|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	0
NZ_CP040827.1\|WP_129327611.1\|1190248_1191481_-\|MFS-transporter	gnl\|CDD\|185300	PRK15402, PRK15402, MdfA family multidrug efflux MFS transporter.	0
NZ_CP040827.1\|WP_013097432.1\|1199126_1200452_+\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	gnl\|CDD\|237838	PRK14862, rimO, 30S ribosomal protein S12 methylthiotransferase RimO.	0
NZ_CP040827.1\|WP_028027952.1\|1208973_1209636_-\|fructose-6-phosphate-aldolase	gnl\|CDD\|183653	PRK12653, PRK12653, fructose-6-phosphate aldolase; Reviewed.	1.98309e-145
NZ_CP040827.1\|WP_020689884.1\|1192384_1192993_+\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|183335	PRK11837, PRK11837, undecaprenyl pyrophosphate phosphatase; Provisional.	6.16636e-121
NZ_CP040827.1\|WP_129327612.1\|1185792_1187082_+\|arsenic-transporter	gnl\|CDD\|185342	PRK15445, PRK15445, arsenical efflux pump membrane protein ArsB.	0
NZ_CP040827.1\|WP_023620242.1\|1188174_1189389_+\|MFS-transporter	gnl\|CDD\|340951	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters. The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.87146e-116
NZ_CP040827.1\|WP_151347636.1\|1185436_1185757_+\|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl\|CDD\|236654	PRK10141, PRK10141, DNA-binding transcriptional repressor ArsR; Provisional.	7.32212e-59
NZ_CP040827.1\|WP_013097439.1\|1208158_1208911_+\|molybdopterin-synthase-adenylyltransferase-MoeB	gnl\|CDD\|180204	PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional.	3.25039e-179
NZ_CP040827.1\|WP_013097418.1\|1187094_1187526_+\|arsenate-reductase-(glutaredoxin)	gnl\|CDD\|182200	PRK10026, PRK10026, arsenate reductase (glutaredoxin).	2.11628e-98
NZ_CP040827.1\|WP_023620241.1\|1189378_1190191_+\|HAD-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	6.84721e-67
NZ_CP040827.1\|WP_151347637.1\|1195229_1196435_-\|serine-type-D-Ala-D-Ala-carboxypeptidase	gnl\|CDD\|182189	PRK10001, PRK10001, serine-type D-Ala-D-Ala carboxypeptidase.	0
NZ_CP040827.1\|WP_029882876.1\|1191648_1192377_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|226422	COG3907, COG3907, PAP2 (acid phosphatase) superfamily protein [General function prediction only].	5.04857e-69
NZ_CP040827.1\|WP_013097430.1\|1198526_1198910_-\|biofilm-formation-regulator-BssR	gnl\|CDD\|183420	PRK12302, bssR, biofilm formation regulator BssR.	8.25363e-76
NZ_CP040827.1\|WP_129327608.1\|1203914_1205786_-\|glutathione-ABC-transporter-ATP-binding-protein-GsiA	gnl\|CDD\|182342	PRK10261, PRK10261, glutathione transporter ATP-binding protein; Provisional.	0
NZ_CP040827.1\|WP_020689875.1\|1205797_1206736_-\|beta-aspartyl-peptidase	gnl\|CDD\|182319	PRK10226, PRK10226, isoaspartyl peptidase; Provisional.	0
NZ_CP040827.1\|WP_038418989.1\|1193060_1193819_+\|DNA-binding-transcriptional-repressor-DeoR	gnl\|CDD\|182644	PRK10681, PRK10681, DNA-binding transcriptional repressor DeoR; Provisional.	0
NZ_CP040827.1\|WP_013097435.1\|1202352_1203891_-\|glutathione-ABC-transporter-substrate-binding-protein-GsiB	gnl\|CDD\|185311	PRK15413, PRK15413, glutathione ABC transporter substrate-binding protein GsiB; Provisional.	0
NZ_CP040827.1\|WP_013095093.1\|1193999_1195175_+\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.47933e-10

>NZ_CP040827.1|WP_038418989.1|1193060_1193819_+|DNA-binding-transcriptional-repressor-DeoR
METRRDDRIAQLIQALKRSDKLHLKEAATLLGVSEMTIRRDLNSESAPVVLLGGYIVLEPRSASHYLISDQKTRLVEEKRKAARLAASLVQPHQTLFFDCGTTTPWIIEAIDSSIPFTAVCYSLNTFLALQEKPECRVILCGGEFHASNAIFKPLNLQDTLSNLCPDIAFYSAAGVSTRQGATCFNLEELPVKHWALSAAQYHVLVVDHSKFGKVRPARMGELAQFNAIISDCRPDEEYVTYAKAQQVKLMY
>NZ_CP040827.1|WP_020689884.1|1192384_1192993_+|undecaprenyl-diphosphate-phosphatase
MLENLNYQLFYLINATPASPEWMIDLATFLAKDLISIVPVLAAILWLWGPRSQVNAQRQLVIKVAMTLGVSVLVSYVLGLAFPHDRPFVEHVGYTFLHHAPDDSFPSDHGTVIFAFALAFLFWHRLWSGALLMAIAVAIAWSRVYLGVHWPLDMVGGFLVGLIGCVSAAILWNLFGLALYRGLSSLYRTLFAIPIRKGWIRD
>NZ_CP040827.1|WP_029882876.1|1191648_1192377_+|phosphatase-PAP2-family-protein
MTRISPRSELSKLQTNKTKQLYRLPVRFYGYQLLVLIALAVVFTWLSRGETLDKWITGFWYDAATHRFPLQKNPLLDLLNHRLAKYIAIAMAVGALFYGAWKRNARLVTAALLMGLGTLVVGVLKSLSHHSCPWDLVEYGGKAVSYPLFSSAPADSGPGRCFPGGHASSGFMVMGLFFAFWRERPRLAWSFVAFGVVLGLAMGFGQVMRGAHFFSHNLWAGWWVWFSQVAVYGLVSAWFAKE
>NZ_CP040827.1|WP_129327611.1|1190248_1191481_-|MFS-transporter
MLNRSSSGTRLGRQALLFPLCLVLYEFSTYIGNDMIQPGMLAVVAQYNAGIEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLTGVVWFIVTCLATLLAQNIEQFTLLRFLQGVSLCFIGAVGYAAIQESFEEAVCIKITALMANVALIAPLLGPLVGAAWVHVAPWEGMFVLFAVLAAIAFFGLHRAMPETATRLGETLSLKELGRDYKAVLKNGRFVAGALATGFVSLPLLAWIAQSPVIIISGEQLSSYEYGLLQVPIFGALIIGNLVLARLTSRRTVRSLIIMGVWPIAAGLTVAAVATVVSSHAYLWMTAGLSIYAFGIGVANAGLVRLTLFASEMSKGTVSAAMGMLQMLIFTVGIEVSKHAYALGGNGLFSLFNLANGVLWVVLMVMFLKDKRVGNALQP
>NZ_CP040827.1|WP_023620241.1|1189378_1190191_+|HAD-family-hydrolase
MSVKLIAVDMDGTFLSDAKTYNRERFLAQYARMKEQGIRFVVASGNQYYQLISFFPEIAHEIAFVAENGGWVVSAGEDVFNGELSKTHFDTVAAVLNDVPGIEIIACGKGSAYTLKAYDDEFKAIAAKYYHRLEMVSDFDNLNDIFFKFGLNVSDDEIPRIQAMLHEKLNDIMVPVTTGHGSIDLIIPGVHKANGLRILQQRWGIDDSEVVAFGDSGNDVEMLRQSGFSFAMANARPHIKAAARFEAPHNNEEGVLDVIDKVLNREAPFN
>NZ_CP040827.1|WP_023620242.1|1188174_1189389_+|MFS-transporter
MTLTSSRKALRLRMWALFMFFFIPGLLMASWATRTPAIRDILSVSTAEMGIVLFGLSIGSMSGILCSAWLVKRFGTRAVIRTTMCCAILGMLVLSVALWYASPVMFALGLLIFGGSFGAAEVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMALTASGVSANLHILLAALISVVPVLTGIRAIPDGTGKNTSDEHKTAEKGLPFYRDFQLMLIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFIDRYSRVAVVRASALLGGLGIAMIIFVDVDWIAGVSVILWGLGASLGFPLTISAASDTGPDAPTRVSVVATTGYLAFLVGPPLLGFLGEHYGLRSAMLVVLGLVMIAALVARAVAKPEKEQTTLEKGYER
>NZ_CP040827.1|WP_013097418.1|1187094_1187526_+|arsenate-reductase-(glutaredoxin)
MTNITIYHNPACGTSRNTLEMIRNSGTEPEIILYLENPPSRDELIKLIADMGISVRALLRTNVEPYEQLGLAEETFTDDQLIGFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILPDAQKGAFTKEDGEAVVDASGKKITQK
>NZ_CP040827.1|WP_129327612.1|1185792_1187082_+|arsenic-transporter
MFLAGAIFLFTLVLVIWQPKGLSIGWSATIGAVLALASGVIHLNDIPVVWNIVWNATATFIAVIIISLLLDESGFFEWAALHVARWGNGRGRLLFTYIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKQATLAFVMAAGFIADTASLPLIVSNLVNIVSADFFKLGFSEYASVMIPVDVAAIAATLVMLHLFFRKEIPPEYDLAKLREPARAIHDLPTFRTGWIVLLLLLVGFFVLEPLGIPVSAIATAGALILFAVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNALSTHGLWVTTLGTGFITAFLSSIMNNMPTVLIGALSIDGSTATGLIKEAMIYANVIGCDLGPKITPIGSLATLLWLHVLAQKNMTITWGYYFRTGIIMTLPVLFVTLAALALRLSFTL
>NZ_CP040827.1|WP_151347636.1|1185436_1185757_+|metalloregulator-ArsR/SmtB-family-transcription-factor
MLHLLQLFKTLSDETRLSIVMLLREAGELCVCDLCSATTESQPKVSRHMALLRESGLVIDRREGKWVYYRLSPNMPAWAATVIDNSWNCLRDETRARLKNSLPGSC
>NZ_CP040827.1|WP_129327614.1|1184937_1185207_+|hypothetical-protein
MKDLLQQGHKLRSKAKELAISVLQKHPDGNKNGKGVKQAEVFRLCGLDWGNYPKALSTQQQYWVVALLRELKADGLVAQVEDKGPWRLK
>NZ_CP040827.1|WP_013095093.1|1193999_1195175_+|IS4-family-transposase
MPLQTVCQKFFSASLPDVHSFRINVLVSMAVALTHGADLTLTSLGRSLPGRAHVKNKIKRVDRALGNTALHRDIPRIQHLLTHTITSLMPFCVIAVDWTGWHDRNWYLLRASLVCNGRSLPLMSEVVPAELAQNSDVQCRFLDRLHDAIPKDKAVTIITDAGFRTDWFRHVSQLGWSFTGRVRGCISFRLDGDKKWMKISELEATGQPVCVGYGVLSRKPRTPCYGRFYLHKRPDAGRQGKGGMPKTQREHRSSAREPWLLFSNAEGLEPHQIMALYSRRMQIEQNFRDDKSPRFGFGLRLSRSQGKGRLEVLNMVAAMASLVMWLAGYRAERQCLHWHYQASSIRHRRVLSYLSLAEEVIRHEPGKVRRLNIVNEMKKLGKEYSNMVMVA
>NZ_CP040827.1|WP_151347637.1|1195229_1196435_-|serine-type-D-Ala-D-Ala-carboxypeptidase
MTRKMTSLRSLAAGSALLFLFAPTLYAAEQAAPEAPPVDARAWILMDYSSGKVLAEGNADEKLDPASLTKIMTSYVVGQALKAGKIKLDDMVTIGKDAWATGNPALRGSSVMFLKPGDQVSVSDLNKGVIIQSGNDACIALADYVAGSQDSFIGLMNGYAQKLGLTNTTFKTVHGLDAPGQFSTARDMALLGKALIHDVPDEYAIHKEKEFTFNKIRQPNRNRLLWSSNVNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGTKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVSQRVWFGDKSEVNLGAGDAGSVTIPRGQLKNLKASYTLTDPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMEAVEEGGFFSRMWDFVMMKFHSWFGSWFS
>NZ_CP040827.1|WP_129327610.1|1197302_1198421_-|PQQ-dependent-sugar-dehydrogenase
MHRSSLIFLPALLFPFSLLAAPDAVKVEVLQNKLEHPWSLAFLPDNKGLLVTLKGGQLKHWQAGKGLSDPITGVPKVWDNGQGGLLDVVLAPDFATSRRVWLSYAEVGADGKAGTAVGYGRLSDDLSRLEAFQTVFRQMPKLSTGHHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKVVRLTEDGKVPPDNPFVNTAGARPEIWSYGIRNPQGMAMNPWSDTLWLNEHGPRGGDEINIPEKGKNYGWPLATHGINYSGLKIPEAKGEHVEGTEKPLFVWKVSPAVSGMAFYNSDVFPQWKNKLFIGALKEKDVIVLSVNGNTVTEDGRILGDRKQRIRDVRVGPDGYLYVLTDETDGQLLKVSPSGR
>NZ_CP040827.1|WP_013097430.1|1198526_1198910_-|biofilm-formation-regulator-BssR
MSVDRLKRDLLNKLINARIDLAAYLQLRKAKGYMSVSESEHLRDNFFELCNFMREKAPILKAEYAESECIALRRAAEVLSIAGVCLMNGRHDCPTFIAVNAEKLENCLTTLSLCIMCLNEHAKLEQH
>NZ_CP040827.1|WP_013097432.1|1199126_1200452_+|30S-ribosomal-protein-S12-methylthiotransferase-RimO
MSNVTHPPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDNADMVIVNTCGFIDSAVQESLEAIGEALTENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKRLADAGVKELLVISQDTSAYGVDVKHRSGFHNGEPVKTSMVGLCEQLAKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPDLTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEVKEERWNRFMQLQQQISAERLQEKVGREIMVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDIIRVKVENADEYDLWGSRV
>NZ_CP040827.1|WP_013097435.1|1202352_1203891_-|glutathione-ABC-transporter-substrate-binding-protein-GsiB
MVKFVARTWLLAASVTAALAASPAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDREMKLKNVLAEGYTVSDDGLVYTIKLRTGVKFQDGTDFNAEAVKVNLDRASNPENSLKRYNLYKNIASTEAVDPTTVKITLKEPFSAFINILAHPATAMISPAALKKYGKEIGFHPVGTGPYELVTWNQTDFVKVKKFAGYWQQGLPKLDTITWRPVVDNNTRAAMLQTGEAQFAFPIPYEQAAILQKNSKLELVASPSIMQRYISMNVTQKPFDNPKVREAINYAINRQALVKVAFAGFATPATGVLPPAIAYAQSYQPWPYDPAKARELLKEAGFPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKVQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNPQVDKDLADALKTTKPDEKARLYKDAQDIIWKESPWVPLVVEKLVSAHNKALTGFYIMPDTGFSFDDADLK
>NZ_CP040827.1|WP_129327608.1|1203914_1205786_-|glutathione-ABC-transporter-ATP-binding-protein-GsiA
MPHSEELDNREVLAVHQLNIAFQEERQFIPAVENLSFSLNRGETLAIVGESGSGKSVTALALMRLLEQTGGQISSEKMLLRRRNRQVIDLNELSAAQMQGVRGADIAMIFQEPMTSLNPVFPVGEQIAESIRLHQGLSGDEALLEAKRMLELVRIPESQSILGRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQQEMEMGVMFITHDMGVVADIADSVLVMHQGRAVETGTVEQIFHAPAHPYTKALLAAVPRLGAMNGSDLPRRFPLISLEAAGRQEEETEQDTVVPGKPILEVRELVTRFPLRSGIFNRVKREVHAVENVSFDLWPGETLALVGESGCGKSTTGRALLRLVESQEGSITFNGERIDTLPDSKLQAVRRNIQFIFQDPYASLDPRHTVGYSIMEPLRVHNLLDGEAAQRRVAWLLERVGLKPEHAWRYPHEFSGGQRQRICIARALALNPKVVIADESVSALDVSIRAQIINLLLDLQRDLGIAFLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMSAVPVADPEHRHGQRVLLQDEMPSNIRKRGEVMERVTLREVGPGHFVAPPRQDNAFSRL
>NZ_CP040827.1|WP_020689875.1|1205797_1206736_-|beta-aspartyl-peptidase
MVNAVIAIHGGAGAITRAQLSPEQEKRYIDALYAIVETGQRMLEAGESALDVVTEAVRLLEECPLFNAGIGSVYTRDETHELDACVMDGVTLKAGAVAGVSHLRNPILAARLVMEESPHVLLTGVGAENFAFAHGMERVSPDLFSTDERYQQLLAARTAGMTQLDHSSPLNETTKMGTVGAVALDKAGNLAAATSTGGMTNKLPGRVGDSPLPGAGCYANNATAAVSCTGTGEVFIRALAAYDITALMDYGGLSLSEACERVVMEKLPALGGEGGLIAVDREGNVALPFNSEGMYRAWGYAGDEPSTGIYRE
>NZ_CP040827.1|WP_013097439.1|1208158_1208911_+|molybdopterin-synthase-adenylyltransferase-MoeB
MAAELSDEEMMRYNRQIVLRGFDFEGQEALKAASVLVVGLGGLGCAAAQYLAAAGVGKMTLLDFDTVSVSNLQRQTLHSDATLGQPKVDSARAALTRINPHVQFTPINAMLDDEALYAQIAKHDLVLDCTDNVAIRNQLNAGCFTHKTPLVSGAAIRMEGQISVFTYAEGEPCYRCLSRLFGENALTCVEAGVMAPLVGVIGSLQAMEAIKVLTRYGTPAAGKIVMYDAMTCQFREMKLMRSPGCEVCSG
>NZ_CP040827.1|WP_028027952.1|1208973_1209636_-|fructose-6-phosphate-aldolase
MELYLDTSDVAAVKKLARIFPLAGVTTNPSIVAAGKTPLEVLLPELHDALGGKGRLFAQVMATTAEGMVDDARKLRSIINDLVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGMLSALAGAEYVAPYVNRVDAQGGDGIQTVVELQQLLTLHAPQSKVLAASFKTPRQALDCLLAGCESITLPLDVAQQFITSPAVDAAIVKFEQDWQGAFGRTAL

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Crispr_ID: NZ_CP040827_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040827_2

1998466-1998561

Orphan

Consensus_repeat	Method
GCAATACCGACGATGGCGGTAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040827_2

>merge|NZ_CP040827|2|1998466-1998561|CRISPRCasFinder
ATAATACCGACAACGGTGGCAATACCGACGATGGCGGTAACACTGATAATGGCGGTAACAGTGACAATGGCAGCAATACCGACGATGGCGGCAACA

>NZ_CP040827|2|2|1998466-1998561|CRISPRCasFinder
ATAATACCGACAACGGTGGCAATA	CCGACGATGGCGGTAACACTGATAATGGCGGTAACAGTGACAATGGCA
GCAATACCGACGATGGCGGCAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040827.1\|WP_013095532.1\|1999981_2003206_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP040827.1\|WP_013095540.1\|1991205_1992027_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP040827.1\|WP_129327805.1\|2013265_2014441_-\|Na+/H+-antiporter-NhaA	unknown	unknown	gnl\|CDD\|181955
NZ_CP040827.1\|WP_013095537.1\|1993894_1995760_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	unknown	unknown	gnl\|CDD\|235131
NZ_CP040827.1\|WP_020688469.1\|2012309_2013209_-\|transcriptional-activator-NhaR	unknown	unknown	gnl\|CDD\|182938
NZ_CP040827.1\|WP_057071064.1\|1986531_1988883_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP040827.1\|WP_057071066.1\|1981865_1984772_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP040827.1\|WP_003856458.1\|2011988_2012252_+\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NZ_CP040827.1\|WP_013095541.1\|1990222_1991209_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP040827.1\|WP_023620045.1\|2003224_2004373_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP040827.1\|WP_038981169.1\|2007873_2010690_-\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
NZ_CP040827.1\|WP_129327802.1\|1988936_1990223_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP040827.1\|WP_151347716.1\|2004827_2005649_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP040827.1\|WP_028015471.1\|2005854_2006805_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
NZ_CP040827.1\|WP_013095528.1\|2006806_2007256_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|237908
NZ_CP040827.1\|WP_013095544.1\|1985473_1986292_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP040827.1\|WP_008502023.1\|1993300_1993780_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP040827.1\|WP_013095527.1\|2007373_2007874_-\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739
NZ_CP040827.1\|WP_013095539.1\|1992030_1992408_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP040827.1\|WP_023620041.1\|1995752_1996283_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	unknown	unknown	gnl\|CDD\|234852

Protein	Function_ID	Function_description	E-value
NZ_CP040827.1\|WP_013095532.1\|1999981_2003206_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP040827.1\|WP_013095540.1\|1991205_1992027_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	1.09184e-146
NZ_CP040827.1\|WP_129327805.1\|2013265_2014441_-\|Na+/H+-antiporter-NhaA	gnl\|CDD\|181955	PRK09561, nhaA, sodium/proton antiporter NhaA.	0
NZ_CP040827.1\|WP_013095537.1\|1993894_1995760_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_CP040827.1\|WP_020688469.1\|2012309_2013209_-\|transcriptional-activator-NhaR	gnl\|CDD\|182938	PRK11062, nhaR, transcriptional activator NhaR; Provisional.	0
NZ_CP040827.1\|WP_057071064.1\|1986531_1988883_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP040827.1\|WP_057071066.1\|1981865_1984772_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP040827.1\|WP_003856458.1\|2011988_2012252_+\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	1.02681e-26
NZ_CP040827.1\|WP_013095541.1\|1990222_1991209_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP040827.1\|WP_023620045.1\|2003224_2004373_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP040827.1\|WP_038981169.1\|2007873_2010690_-\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_CP040827.1\|WP_129327802.1\|1988936_1990223_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP040827.1\|WP_151347716.1\|2004827_2005649_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	1.00454e-140
NZ_CP040827.1\|WP_028015471.1\|2005854_2006805_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
NZ_CP040827.1\|WP_013095528.1\|2006806_2007256_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|237908	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	1.82359e-107
NZ_CP040827.1\|WP_013095544.1\|1985473_1986292_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	3.34124e-172
NZ_CP040827.1\|WP_008502023.1\|1993300_1993780_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.13223e-126
NZ_CP040827.1\|WP_013095527.1\|2007373_2007874_-\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	3.46545e-76
NZ_CP040827.1\|WP_013095539.1\|1992030_1992408_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	9.40134e-77
NZ_CP040827.1\|WP_023620041.1\|1995752_1996283_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	gnl\|CDD\|234852	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF.	1.52855e-134

>NZ_CP040827.1|WP_023620041.1|1995752_1996283_-|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF
MILIIYAHPYPHHSHANKRMLEQVRTLDNVEIRSLYQLYPDFNIDIAAEQEALTRADLIIWQHPMQWYSTPPLLKLWIDKVFSHGWAYGHNGHALKGKSLMWAVTTGGGESHFDIGSFPGFEVLAQPLQATALYCGLTWLPPFAMHCTFVCDDETLQAQARHYKQRLLEWQETHNG
>NZ_CP040827.1|WP_013095537.1|1993894_1995760_-|glutathione-regulated-potassium-efflux-system-protein-KefC
MDSHTLIQALIYLGAAALIVPVAVRLGLGSVLGYLIAGCVIGPWGFRLVTDAEAILHFAEIGVVLMLFVIGLELDPQRLWKLRASVFGGGALQMAACGLLLGGFCILLGMDWKVAELIGMTLALSSTAIAMQAMNERNLTVSQMGRSAFSVLLFQDIAAIPLVAMIPLLAASGASTTLGAFALSALKVVGALALVVLLGRYVTRPLLRFVARSGLREVFSAVALFLVFGFGLLLEEAGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLVTHPLRILILLVGFLVIKMVMLWLIARPLNVPGRQRLWFAVLLGQGSEFAFVVFGAAQMANVLDPEWAKALTLAVALSMAATPILLVLLTRLEKTGSEQEREADEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVILDHDPDHVDTLRKFDMKVFYGDATRVDLLESAGAAKAEVLINAIDDPQTSMQLVELVKEHFPNLTIISRARDVDHYIQLRQAGVDAPERETFEGALKSGRMALESLGLGAYEARERADLFRRFNTDMVEEMVAMAGSTATERAAVFKRTSAMLTEIINEDRNHLSLVQRHGWQGTEEGKHTGDPADEPESKPSA
>NZ_CP040827.1|WP_008502023.1|1993300_1993780_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRTTLNKPVVMGRLTWESIGRPLPGRKNIVISSQPGTDDRVEWVKSVDEAIAACGNAEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP040827.1|WP_013095539.1|1992030_1992408_+|Co2+/Mg2+-efflux-protein-ApaG
MIDSPRVCVQVQSVYVESQSSPDEERFVFAYTVTIRNLGRMPVQLLGRYWLITNGNGREIEVQGEGVVGEQPHIAPGEEYQYTSGAVIETPLGTMQGHYEMVDVDGNVFRVAIPVFRLAVTTLIH
>NZ_CP040827.1|WP_013095540.1|1991205_1992027_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MTNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDELTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYFCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHKTMPYPVKDLRVLSRITTEAFNQRRKTIRNSLGNLFTVDVLAELGIDPAMRAENISVEQYCKLANYISENAPPKES
>NZ_CP040827.1|WP_013095541.1|1990222_1991209_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MKQHRVVITPGEPAGIGPDLVVQLAQRSWPVELVVCADATLLQDRASLLGLPLTLIPYVEGQQPAPQQAGTLTLLPVPLRTPVIPGQLSTENGHYVVETLARACDGCIKGEFAALITGPVHKGVINEAGIPFTGHTEFFEERSHSPKVVMMLATEAMRVALVTTHLPIKAIPDAITPELLREIIGILHHDLQTKFGIKQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLNEMRAKGMNLSGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALDLAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP040827.1|WP_129327802.1|1988936_1990223_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGVAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMKSVKLNSGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKITDEQLDQAIANIAKQNNMTLDQMRSRLAYDGISYSTYRNQIRKEMLISEVRNNEVRRRVTILPQEVDALAKQVGNQNDASTELNLSHILIPLPENPTSDQAAEAESQARAIVEQARNGSDFGKLAITYSADQQALKGGQMGWGRIQELPSIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGQSQNISVTEVHARHILLKPSPIMTDDQARAKLQQIAADIKSGKTSFANAAKEFSQDPGSANQGGDMGWAAADIYDPAFRDALMKLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLFNRKFSEEAATWMQEQRASAYVKVLSN
>NZ_CP040827.1|WP_057071064.1|1986531_1988883_+|LPS-assembly-protein-LptD
MKKRIPTLLATMIGTALYSQQGLAADLASQCMLGVPSYNRPLVSGDTNSLPVTITADSSKGTYPDNATFTGSVDINQGNSRLQADEVQLHQKQPEGAAEPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSNTWSVVGSEVIHDREEQVAEIWNARFKLGPVPVFYSPYLQLPVGDKRRSGFLIPNAKYSTSNYFEFYLPYYWNIAPNMDATITPHYIHKRGNVMWENEFRYLTQAGTGLMELDYLPSDKVFQDEHPTEGDKHRWMYFWRHAGVMDQVWRFNIDYTKVSDPYYFNDFDSKYGSSTDGYATQKFSVGYAIQNFNATVSTKQFQVFDSQTRSTYGAEPQLDVNWYQNDVGPFDTRVYAQAVHFVNTNSDMPESTRVHLEPTINLPLSNNWSSLNTEAKLMATHYQQKNVDWYNNRYGTDLDESVNRVLPQFKMDGKLIFERDMGLLADGYTQTLEPRIQYLYVPYRDQSKIQNYDSAFLQSDYSGLFRDRTYGGLDRIASANQLTTGVTTRVYDESAVERFNVSVGQIYYFTESRTGDDNINWEKDNKTGSLVWAGDTYWRMTDRWGLRGGLQYDTRLDNIATSSAAVEYRRDEDRMVQLTYRYASPEYIQATLPNYATSEQYKDGISQVGGAASWPIADRWSIVGAYYFDTNANKPADQMVGLQYNSCCYALRVGYERKLNGWDTQNNQSKYDNVIGFNVELRGLSSNYGLGTQQMLRSNILPYRSSL
>NZ_CP040827.1|WP_013095544.1|1985473_1986292_-|co-chaperone-DjlA
MQYWGKIIGVAFAIIMGAGFWGIVLGLIIGHMFDKARSRKMAWFANQRERQSLFFSTTFEVMGHLTKSKGRVTEADIQIASVFMDRMNLHGESRVAAQNAFRIGKSDNYPLREKMRQFRSICFGRFDLIRMFLEIQIQAAFADGSLHPNERDVLYVIAEELGISRMQFDQFLRMMQGGAHFGGGYQQHQSSGGGWQQAQRGPTLEDACNVLGVKPSDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAYELIKEQKNFK
>NZ_CP040827.1|WP_057071066.1|1981865_1984772_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVAVDARMVTLLFPATGENRLYARNDSPVTRVMFNPGDTVTSHDGWQLKVEDVKEENGLLAYIGTRLDTDESNVILREVLLDSKLVFSKPQDRLFAGQIDRMDRFSLRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDADNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLLVVDEAHHLVWSEEAPSREYMAIEQLAERVPGVLLLTATPEQLGLESHFARLRLLDPNRFHDFEQFVEEQNNYRPVADAVAMLLAGKRLSNDELNTLSDLIGEQDIEPLLQAANSDSDNAVSARKELIDMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSQEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTAHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIVERDRAAAWFSEEDSGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWFHEGLDAFEHTCPTGRTIYDQVHTDLIGYLAAPENTDGFDELIKSCREKHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLISFAMNLFDIVGINQDDRGENMIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLTRFLPPTPVRLLLDKNGTNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKAARTLIDAAREEADEKLSAELSRLEALKAVNPNIRDDELTAIESNRQQVLESLNQASWRLDALRLIVVTHQ
>NZ_CP040827.1|WP_013095532.1|1999981_2003206_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLDTARSGIAHNMEEALAVAAEVGYPCIIRPSFTMGGTGGGIAYNREEFEEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKTGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAELGINGLDADFLRMLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEDECEANPSVDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQQAVDRLKLKQPANATVTAIEQAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKDNEVYLIEVNPRAARTVPFVSKATGIPLAKVAARVMAGQTLAQQGVTKEIIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKSGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTAGRQAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQINK
>NZ_CP040827.1|WP_023620045.1|2003224_2004373_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFIGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNLDAALALEKAKAFPGLNGMDLAKEVTTTEAYSWTQGSWTLSDDLPEAKKESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAEDVLKMNPDGIFLSNGPGDPAPCDYAIDAIKSFLETDIPVFGICLGHQLLALASGANTIKMKFGHHGGNHPVKDIDNNTVMITAQNHGFAVDEASMPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>NZ_CP040827.1|WP_151347716.1|2004827_2005649_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDAQIRVAIAGAGGRMGRQLIQAALQMDGVALGAALEREGSSLVGADAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLTHLAFCRQHGKGMVIGTTGFDEAGKQAIQDASHEIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIVEAHHRYKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERVEITHKASSRMTFANGAVRSALWLKDKENGLFDMRDVLDLNSL
>NZ_CP040827.1|WP_028015471.1|2005854_2006805_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALEIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPEDVLTLNVKNEARLSFMTQTTLSVDDTSDVIDALRQRFPKIVGPRKDDICYATTNRQEAVRALAEQADVVLVVGSKNSSNSNRLAELAQRMGKAAFLIDDATDIQEAWVKNAACVGVTAGASAPDILVQNVIARLQELGGGEAVPLEGREENIVFEVPKELRIDAREVE
>NZ_CP040827.1|WP_013095528.1|2006806_2007256_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MSKSVQSNSAVLVHFTLKLDDGSTAESTRNNGKPALFRLGDTSLSEGLEQQLLGLKEGEKKAFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGRTVHFDIEVLEIDPVLEA
>NZ_CP040827.1|WP_013095527.1|2007373_2007874_-|lipoprotein-signal-peptidase
MSKTLCSTGLRWLWLVVVVLIIDLGSKFLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGICVVLAVLMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADSAICIGAALIVLEGFLPKPAAKEQA
>NZ_CP040827.1|WP_038981169.1|2007873_2010690_-|isoleucine--tRNA-ligase
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLAGYDSPYVPGWDCHGLPIELKVEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRADFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFEAVDQDAIKGKFGLPGVSGPISLVIWTTTPWTLPANRAISLSGEFEYALVQIDGQALILAKDLVESVLKRANITDYTVLGTVKGDALELMRFKHPFLDFDVPAILGDHVTLEAGTGAVHTAGGHGPDDYNISLKYGLEIANPVGPDGSYLPGTYPSLDGINVFKANDIIVEMLRERGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLREQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETHELHPNTLELMEEVAKRVEIDGIQAWWDLDARDILGADADNYEKVPDTLDVWFDSGSTHASVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDIVKAYESYDFHEVVQRLMRFCSIEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVFTGEWYEGLFDLSSTEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGAKVADYADASADAQQSELLKGLKVALSKAEGEKCPRCWHYTTDVGQVAEHADICGRCVSNVAGDGEKRKFA
>NZ_CP040827.1|WP_003856458.1|2011988_2012252_+|30S-ribosomal-protein-S20
MANIKSAKKRAVQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQNAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA
>NZ_CP040827.1|WP_020688469.1|2012309_2013209_-|transcriptional-activator-NhaR
MSHLNYNHLYYFWHVYKQGSVVGAAEALFLTPQTITGQIKALEERLQGKLFKRKGRGIEPSELGELVFRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKRLVSGVLDAAVVEDEQIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVKIGECGVSFWCINPPPEKPFPACLEERRLLVPGRRSMLGRKLQNWFNSQGLNVEILGEFDDAALMKAFGEAHNAIFVAPTLYMHDLYSDNKITEIGRVDNVMEEYHAIFAERMIQHPAVQRICNRDYSALFTPPAN
>NZ_CP040827.1|WP_129327805.1|2013265_2014441_-|Na+/H+-antiporter-NhaA
MKLLHRFFSSEASGGVILIIAAAAAMLLANMGMTRDLYHAFLETPVELRVGALEINKNMLLWINDALMAVFFLLVGLEVKRELVMGSLASRQRAAFPVIAAIGGMVVPALLFLAFAWQDPVARDGWAIPAATDIAFALGVLALLGSRVPVALKIFLMALAIIDDLGAIVIIALFYTSDLSILSLSVAAGAIAVLALLNIFNVRRIGIYILVGMVLWTAVLKSGVHATLAGVIVGFFVPLKPQEGKSPAKQLEHVLHPWVAFMILPLFAFANAGVSLGGVTLEGLTSVLPLGIIAGLFIGKPLGISLFCWLALKFKLATLPNGTTFGQIMAVGVLCGIGFTMSIFISTLAFGANAPELIIWAKLAILIGSLLAAVIGYTLLKVKLSGQAVQA

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Crispr_ID: NZ_CP040827_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040827_3

3211158-3211235

Orphan

Consensus_repeat	Method
AGGGCTGAGGGTTCCCCACAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040827_3

>merge|NZ_CP040827|3|3211158-3211235|CRISPRCasFinder
AGGGCTGAGGGTTCCCCACAAAATAATGCCTGCACGGAGGACCCCCTCTCCCTTGAGGGCTGAGGGTTCCCCAGAAAA

>NZ_CP040827|3|3|3211158-3211235|CRISPRCasFinder
AGGGCTGAGGGTTCCCCACAAAA	TAATGCCTGCACGGAGGACCCCCTCTCCCTTG
AGGGCTGAGGGTTCCCCAGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040827.1\|WP_013099104.1\|3194701_3195532_+\|rhomboid-family-intramembrane-serine-protease-GlpG	unknown	unknown	gnl\|CDD\|182828
NZ_CP040827.1\|WP_013095093.1\|3219110_3220286_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP040827.1\|WP_013099096.1\|3205957_3206533_-\|Fe-S-biogenesis-protein-NfuA	unknown	unknown	gnl\|CDD\|183027
NZ_CP040827.1\|WP_014833557.1\|3220426_3222046_-\|phosphoenolpyruvate-carboxykinase-(ATP)	unknown	unknown	gnl\|CDD\|161774
NZ_CP040827.1\|WP_058684100.1\|3206594_3207278_-\|DNA-utilization-protein-GntX	unknown	unknown	gnl\|CDD\|183221
NZ_CP040827.1\|WP_013099084.1\|3224165_3225044_-\|Hsp33-family-molecular-chaperone-HslO	unknown	unknown	gnl\|CDD\|234643
NZ_CP040827.1\|WP_010436417.1\|3210662_3210890_-\|ferrous-iron-transporter-A	unknown	unknown	gnl\|CDD\|181949
NZ_CP040827.1\|WP_013099093.1\|3208067_3208307_-\|[Fe-S]-dependent-transcriptional-repressor-FeoC	unknown	unknown	gnl\|CDD\|185329
NZ_CP040827.1\|WP_013099097.1\|3204252_3205569_-\|gluconate-transporter	unknown	unknown	gnl\|CDD\|237880
NZ_CP040827.1\|WP_151347817.1\|3212613_3213768_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP040827.1\|WP_006177890.1\|3216979_3217699_+\|two-component-system-response-regulator-OmpR	unknown	unknown	gnl\|CDD\|181883
NZ_CP040827.1\|WP_013099083.1\|3225068_3225470_-\|ribosome-associated-heat-shock-protein-Hsp15	unknown	unknown	gnl\|CDD\|182397
NZ_CP040827.1\|WP_151347818.1\|3222381_3224130_+\|DUF4153-domain-containing-protein	unknown	unknown	gnl\|CDD\|372672
NZ_CP040827.1\|WP_129328045.1\|3199660_3202054_+\|maltodextrin-phosphorylase	unknown	unknown	gnl\|CDD\|237881
NZ_CP040827.1\|WP_013099091.1\|3213856_3216187_-\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
NZ_CP040827.1\|WP_029882169.1\|3217695_3219042_+\|two-component-system-sensor-histidine-kinase-EnvZ	unknown	unknown	gnl\|CDD\|236531
NZ_CP040827.1\|WP_013099090.1\|3216273_3216747_-\|transcription-elongation-factor-GreB	unknown	unknown	gnl\|CDD\|179345
NZ_CP040827.1\|WP_013099103.1\|3195548_3196307_+\|DeoR/GlpR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182827
NZ_CP040827.1\|WP_048972503.1\|3207313_3208096_+\|pimeloyl-ACP-methyl-ester-esterase-BioH	unknown	unknown	gnl\|CDD\|137836
NZ_CP040827.1\|WP_038420753.1\|3196369_3199075_-\|HTH-type-transcriptional-regulator-MalT	unknown	unknown	gnl\|CDD\|235315

Protein	Function_ID	Function_description	E-value
NZ_CP040827.1\|WP_013099104.1\|3194701_3195532_+\|rhomboid-family-intramembrane-serine-protease-GlpG	gnl\|CDD\|182828	PRK10907, PRK10907, intramembrane serine protease GlpG; Provisional.	0
NZ_CP040827.1\|WP_013095093.1\|3219110_3220286_-\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.47933e-10
NZ_CP040827.1\|WP_013099096.1\|3205957_3206533_-\|Fe-S-biogenesis-protein-NfuA	gnl\|CDD\|183027	PRK11190, PRK11190, iron-sulfur cluster biogenesis protein NfuA.	4.45383e-158
NZ_CP040827.1\|WP_014833557.1\|3220426_3222046_-\|phosphoenolpyruvate-carboxykinase-(ATP)	gnl\|CDD\|161774	TIGR00224, Phosphoenolpyruvate_carboxykinase, phosphoenolpyruvate carboxykinase (ATP). Involved in the gluconeogenesis pathway. It converts oxaloacetic acid to phosphoenolpyruvate using ATP. Enzyme is a monomer. The reaction is also catalysed by phosphoenolpyruvate carboxykinase (GTP) (EC 4.1.1.32) using GTP instead of ATP, described in PROSITE:PDOC00421 [Energy metabolism, Glycolysis/gluconeogenesis].	0
NZ_CP040827.1\|WP_058684100.1\|3206594_3207278_-\|DNA-utilization-protein-GntX	gnl\|CDD\|183221	PRK11595, PRK11595, DNA utilization protein GntX; Provisional.	3.30387e-135
NZ_CP040827.1\|WP_013099084.1\|3224165_3225044_-\|Hsp33-family-molecular-chaperone-HslO	gnl\|CDD\|234643	PRK00114, hslO, Hsp33 family molecular chaperone HslO.	1.68455e-153
NZ_CP040827.1\|WP_010436417.1\|3210662_3210890_-\|ferrous-iron-transporter-A	gnl\|CDD\|181949	PRK09555, feoA, ferrous iron transporter A.	4.29491e-46
NZ_CP040827.1\|WP_013099093.1\|3208067_3208307_-\|[Fe-S]-dependent-transcriptional-repressor-FeoC	gnl\|CDD\|185329	PRK15431, PRK15431, [Fe-S]-dependent transcriptional repressor FeoC.	2.7738e-48
NZ_CP040827.1\|WP_013099097.1\|3204252_3205569_-\|gluconate-transporter	gnl\|CDD\|237880	PRK14984, PRK14984, gluconate transporter.	0
NZ_CP040827.1\|WP_151347817.1\|3212613_3213768_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.76827e-27
NZ_CP040827.1\|WP_006177890.1\|3216979_3217699_+\|two-component-system-response-regulator-OmpR	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	2.30028e-178
NZ_CP040827.1\|WP_013099083.1\|3225068_3225470_-\|ribosome-associated-heat-shock-protein-Hsp15	gnl\|CDD\|182397	PRK10348, PRK10348, ribosome-associated heat shock protein Hsp15; Provisional.	4.78569e-79
NZ_CP040827.1\|WP_151347818.1\|3222381_3224130_+\|DUF4153-domain-containing-protein	gnl\|CDD\|372672	pfam13687, DUF4153, Domain of unknown function (DUF4153). Members of this family are annotated as putative inner membrane proteins.	3.55625e-23
NZ_CP040827.1\|WP_129328045.1\|3199660_3202054_+\|maltodextrin-phosphorylase	gnl\|CDD\|237881	PRK14985, PRK14985, maltodextrin phosphorylase; Provisional.	0
NZ_CP040827.1\|WP_013099091.1\|3213856_3216187_-\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NZ_CP040827.1\|WP_029882169.1\|3217695_3219042_+\|two-component-system-sensor-histidine-kinase-EnvZ	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	0
NZ_CP040827.1\|WP_013099090.1\|3216273_3216747_-\|transcription-elongation-factor-GreB	gnl\|CDD\|179345	PRK01885, greB, transcription elongation factor GreB; Reviewed.	4.14185e-109
NZ_CP040827.1\|WP_013099103.1\|3195548_3196307_+\|DeoR/GlpR-family-transcriptional-regulator	gnl\|CDD\|182827	PRK10906, PRK10906, DeoR/GlpR family transcriptional regulator.	0
NZ_CP040827.1\|WP_048972503.1\|3207313_3208096_+\|pimeloyl-ACP-methyl-ester-esterase-BioH	gnl\|CDD\|137836	PRK10349, PRK10349, pimeloyl-ACP methyl ester esterase BioH.	2.93707e-152
NZ_CP040827.1\|WP_038420753.1\|3196369_3199075_-\|HTH-type-transcriptional-regulator-MalT	gnl\|CDD\|235315	PRK04841, PRK04841, HTH-type transcriptional regulator MalT.	0

>NZ_CP040827.1|WP_010436417.1|3210662_3210890_-|ferrous-iron-transporter-A
MQFTPDSAWKITGFTREISPAYRQKLLSLGMLPGSSFQVVRVAPLGDPVHIETRRVNLVLRKKDLALIEVEALSQ
>NZ_CP040827.1|WP_013099093.1|3208067_3208307_-|[Fe-S]-dependent-transcriptional-repressor-FeoC
MASLIQVRDLLALQGRMEAKQLSLSLHTPQPMIDAMLERLEAMGKAIRIQEEPDGCLSGSCKHCPEGKACLREWWALRD
>NZ_CP040827.1|WP_048972503.1|3207313_3208096_+|pimeloyl-ACP-methyl-ester-esterase-BioH
MKTLWWQTVGTGNRHLVLLHGWGLNAEVWHCVNEELASHFTLHLVDLPGFGRSRGYGAMSLEEMAQQVLAAAPQQAIWLGWSLGGLVASEVALTNPERVQALVTVASSPNFSAQEEWPGIKPDVLSNFQRQLSEDYQRTVERFLALQTMGTESARKDARLLKQTVLSLPMPDVEVLNGGLELLKTVDLREPLTALAVPHLRIYGYLDGLVPRKVVPLLDELWPASQSLTIAKAAHAPFISHPAEFCSALIAFSHEVPTTP
>NZ_CP040827.1|WP_058684100.1|3206594_3207278_-|DNA-utilization-protein-GntX
MLTVPGLCWLCRMPLALSAWGVCSVCTRSLASRITTCPQCGLPAYSPQFPCGRCLKKPPPWSALVAIDDYVPPLSRLIHALKFSGQIALARPLARLLLLAVLQARRTRALPKVDLVLNVPLYRRRHWRRGYNQSDLLCRPLARWLGCQYPAAALTRRHATAIQHQLSARLRKRNLKNAFRLEFAVKGLHIAIVDDVVTTGSTVAELSRLLLQSGAASVQVWCLCRTL
>NZ_CP040827.1|WP_013099096.1|3205957_3206533_-|Fe-S-biogenesis-protein-NfuA
MIRISDSAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDQLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVSDDAPLMERVEYLLQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRDLTEHQRGEHSYY
>NZ_CP040827.1|WP_013099097.1|3204252_3205569_-|gluconate-transporter
MPLVIVAIGVVLLLLLMIRFKMNGFIALVLVALAVGLMQGMPLVKVISSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIDKFGKKNIQWAVVLTGFTVGFALFYEVGFVLMLPLVFTIAAAASIPLLYVGVPMAAALSVTHGFLPPHPGPTAIATIFHADMGKTLLFGTILAIPTVILAGPVYARFLKGIDKPIPEGLYSAKTFTEEEMPGFGVSVWTSLVPVILMAMRAVAEMVLPKGHAFLSVAEFLGDPVMATLIAVLIAMFTFGLNRGRSMDQINDTLTSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIAAMMHETNVSPLLMAWSIAAVLRIALGSATVAAITAGGIVAPLIATTGVSPELMVIAVGSGSVIFSHVNDPGFWLFKEYFNLTIGETIKSWSALETIISVCGLVGVLLLNMVV
>NZ_CP040827.1|WP_129328045.1|3199660_3202054_+|maltodextrin-phosphorylase
MSQPTFNKAQFQAALTRQWQRFGLHAANEMTPHQWWQAVSGALAEQLDAQPLAKPVKGQRHVNYISMEFLIGRLTGNNLLNLGWYQEVGDVLKEHDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSAIGYGLNYQYGLFRQSFADGHQMEAPDDWHRNTYPWFRHNAQLDVQVNIGGKVSKQGLWEPAFTFIGEAWDLPVLGYRNGVAQPLRLWQAKHAHPFNLTKFNDGDFLRAEQQGIDAEKLTKVLYPNDNHLAGKKLRLMQQYFQCACSVADILRRHHLAGRKLAQLPDFEVIQLNDTHPTIAIPELLRVLIDEHQLSWDDAWAITSRTFAYTNHTLMPEALECWDEKLVKTLLPRHMQIINKINDQFKTLVDKTWPGNKAVWAKLAVVHDKQVRMANMCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPTKFHNVTNGITPRRWIKQCNPLLAGLLDKTLKKEWANDLDQLINLEKYADDAKFREQYRAIKRDNKVRLAAFVKARTGIEINPNAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIILAINKVAEAINNDPKVGDKLKVVFLPDYCVSAAEMLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEEVKALKAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSMDKHGGDPYLVMVDFTAYVEAQKQVDVLYRDQEAWTRACILNTARCGMFSSDRSIRDYQTRIWQAKR
>NZ_CP040827.1|WP_038420753.1|3196369_3199075_-|HTH-type-transcriptional-regulator-MalT
MLIPSKLSRPVRLDHTVVRERLLAKLSGAHNFRLALVTSPAGYGKTTLISQWAAGKSDLGWYSLDEGDNQQERFASYLIAAIQQATNGHCVASEVMVQKRQYASLSSLFSQLFIELAEWHRPLYVVIDDYHLITNPVIHESMRFFLRHQPENLTLVVLSRNLPQLGIANLRVRDQLLEVGSQQLAFTHQEAKQFFDCRLNSPIEAAESSRLCDDVAGWATALQLIALSARQNNSPTHQSARRLAGINASHLSDYLVDEVLNSVDPSTRHFLLKSSLLRSMNDALIVRVTGCENGQLQLEEIERQGLFLTRMDDPGEWFSYHPLFGSFLRQRCQWELATELPDIHRAAAESWMAQGFPSEAIHHALAAGDAGMLRDILLNHAWGLFNHSELTLLEESLKALPWESLLENPRLVLLQAWLMQSQHRYSEVNTLLARAEQEMESDMDTTLHGEFNALRAQVAINDGDPEEAERLAMVALDELPLANFYSRIVATSVHGEVLHCKGELTRSLSLMQQTEQMARRHDVWHYALWSLIQQSEILFAQGFLQAAWENQEKAFQLIREQHLEQLPMHEFLLRIRAQLLWAWSRLDEAESCARQGVEVLSGFQPQQQLQCLALLVQCSLARGDLDNARNHLNRLENLLGNGQYHSDWVSNADKVRVIYWQMTGDKKSAANWLRQTPKPEFANNHFLQSQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKNDAQRVLLEALQLANRTGFISHFVIEGEVMAQQLRQLIQLNTLPELDQHRAQRILREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELAVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYGV
>NZ_CP040827.1|WP_013099103.1|3195548_3196307_+|DeoR/GlpR-family-transcriptional-regulator
MKQTQRHDAIIELVKKQGYVSTEELVEQFAVSPQTIRRDLNDLADQNRILRHHGGAALPSSSVNTSWHDRKATQTAEKERIARKVASQIPNGATLFIDIGTTPEAVAHALLDHENLRIVTNNLNVANTLMQKDDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVNAVYTDVMPPAGVMQVIKDNNVQLELC
>NZ_CP040827.1|WP_013099104.1|3194701_3195532_+|rhomboid-family-intramembrane-serine-protease-GlpG
MLMITSFTNPRVAQAFVDYMATQGIILTVQQHTKTDVWLADESQADRVNAELARFLENPGDPRYLAASWQSGQTGSGLHYRRFPFLATIRERAGPFTLLLMAACIIVFIIMNVVGDQSVMIALAWPYDPSLDFDVWRYFTHALMHFSVMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQHKFSGPWFGGLSGVVYALMGYVWLRGERDPESGIYLQRGLITFALIWLIAGWFDLFGMSIANGAHVTGLAVGLAMAFADTLHARKRT
>NZ_CP040827.1|WP_151347817.1|3212613_3213768_+|IS481-family-transposase
MESLMPWDARDTMSLRTEFVLFASQDGANIRSLCRRFGISPATGYKWLHRWAEEGAAGLQDRPRIPHHSPNRSSDDITALLRMAHDRHERWGARKIKCWLEDQGHRMPAFSTVHNLMARHGLLPGTSPGIPATGRFEHDAPNRLWQMDFKGHFPFGGGRCHPLTLLDDHSRFSLCLAHCTDEQRETVQQRLVSVFERYGLPDRMTMDNGAPWGDTTDTWTALELWLMRHGIRVGHSRPYHPQTQGKLERFHRSLKTEVLQGKWFANEGELQRAFDHWRTVYNLERPHEALDMAVPGSRYQPSARQYSGNTTPPEYDEGVMVRKVDISGKLSVKGVSLSAGKAFREERVGLKEMQEDGRYEVWWYSTKVGVIDLKKKSITMGKGC
>NZ_CP040827.1|WP_013099091.1|3213856_3216187_-|RNA-binding-transcriptional-accessory-protein
MMKDSLCRIIAGELQARAEQVEAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRNLETRLGYLRELEDRRQAILKSIGEQGKLTSDLEKAINGTLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLAELLWNEPSHDPETEAAKFIDADKGVADTKAALDGARYILMERFSEDAALLSRVRDYLWKNAHIVSTVVAGKEEEGAKFRDYFDHHEPISTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESHCEQIITDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDGTGKLVATDTIYPHTGQAAKAAVVVAALCEKYNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGDSNALRNLKAVDFTDEQFGVPTVTDIIKELEKPGRDPRPEFKTATFADGIETMNDLLPGMVLEGAVTNVTNFGAFVDIGVHQDGLVHISSLADKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGSNGGSREQQRPAAKGAKPRGRDAQPAGNSAMMDALAAAMGKKR
>NZ_CP040827.1|WP_013099090.1|3216273_3216747_-|transcription-elongation-factor-GreB
MKTPLITREGYEKLKKEMDYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGNTLRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVQTPAGEASWYVNEITYVK
>NZ_CP040827.1|WP_006177890.1|3216979_3217699_+|two-component-system-response-regulator-OmpR
MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGAKA
>NZ_CP040827.1|WP_029882169.1|3217695_3219042_+|two-component-system-sensor-histidine-kinase-EnvZ
MRRMRFSPRSSFARTLLLIVTLLFVSLVTTYLVVLNFAILPSLQQFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEDAGLRWAQHYEFLSQQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPLFRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTRAFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMGEEDGYLAESINKDIEECNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVVAAESGYEREIDTDLQAGEIQVRMHPLSIKRAVANMVVNAARYGNGWIKVSSGSELNRAWFQVEDDGPGIKPEQRKHLFQPFVRGDSARSTSGTGLGLAIVQRIVDNHNGLLEIGTSERGGLSIRAWLPVPVTRGQVKEG
>NZ_CP040827.1|WP_013095093.1|3219110_3220286_-|IS4-family-transposase
MPLQTVCQKFFSASLPDVHSFRINVLVSMAVALTHGADLTLTSLGRSLPGRAHVKNKIKRVDRALGNTALHRDIPRIQHLLTHTITSLMPFCVIAVDWTGWHDRNWYLLRASLVCNGRSLPLMSEVVPAELAQNSDVQCRFLDRLHDAIPKDKAVTIITDAGFRTDWFRHVSQLGWSFTGRVRGCISFRLDGDKKWMKISELEATGQPVCVGYGVLSRKPRTPCYGRFYLHKRPDAGRQGKGGMPKTQREHRSSAREPWLLFSNAEGLEPHQIMALYSRRMQIEQNFRDDKSPRFGFGLRLSRSQGKGRLEVLNMVAAMASLVMWLAGYRAERQCLHWHYQASSIRHRRVLSYLSLAEEVIRHEPGKVRRLNIVNEMKKLGKEYSNMVMVA
>NZ_CP040827.1|WP_014833557.1|3220426_3222046_-|phosphoenolpyruvate-carboxykinase-(ATP)
MRVTGLTPQDLKAYGIHDVQEIVYNPDYDTLYQEELNPALEGYERGVLTNLGAIAVDTGIFTGRSPKDKYIVRDETTRDTLWWADKGKGKNDNKPLSPETWQHLKGLVTQQLSGKRLFIVDAFCGANADTRLSVRFITEVAWQAHFVKNMFIRPTDEELQTFKPDFIVMNGAKCTNPQWQEQGLNSENFIAFNLTERIQLIGGTWYGGEMKKGMFSVMNYLLPLRGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTIRLSEEAEPDIFHAIRRDALLENVTVRADGSIDFDDASKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTASQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQASGAQAYLVNTGWNGTGKRISIKDTRAIIDAILDGSLDNAETFTLPMFDLAIPTALPGVDTHILDPRNTYGSPEQWREKAETLAKLFIENFEKYTDTPAGEALVSAGPKL
>NZ_CP040827.1|WP_151347818.1|3222381_3224130_+|DUF4153-domain-containing-protein
MENSETLSPSTRLAIVLVGALQGLICYGISEYIAYAKLPSDTVWSLCVMPATVAMTATVALSVTSFRKPLFWLALVIVGAVVAGMGAWLKWSVSGLEHWQIKEAVLVWGFHLLLMMLLMLPWLQRRLSPATTASFYSDFYDKHWHNALTILTIFISNGLFWLVLFLWAELFKLIGIQFFDRLFFQSDWFISVAIGVVSASVAVLARMQVRLMRALQNLLTLIATGLLPLMAALALLFIGALPVMGFEAISARISAAGLLTALALLLLFLVTIVWHPQRQTLPYYALLNGMVRLAIAIVPAYPVLAGWALWLRISQYGWSPERLYGVLITLVALVWAVGFCISVVFCRRQAQKLQASVIPLTGSLALILLILIHTPVLDPWRISVESHMSRYHDGRINADQVSLYMLSNSGRKGREAMQTLQYDRQFMAEPKRQRELYGLLSGNRDGAGKMTAGMLEKQFTLAPGTSPPDKGLWQAMLNNLYRFDSCSRERKTCLLMSLDLNGDGKPEAVIYQFSDRTIVVYTQTGTGWKLAGDTWKMPDGLSREELERAVQQGKVKPVVKPWADIEIFGERVEINYDNALVR
>NZ_CP040827.1|WP_013099084.1|3224165_3225044_-|Hsp33-family-molecular-chaperone-HslO
MAQHDQLHRYLFEQFAVRGELVTVSETWKQILENHNYPLPVKTLLGELLVATSLLTATLKFAGDITVQLQGDGPMSLAVINGNNQQQMRGVARVQGDVPENADLKTLVGNGYLVITISPEEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGEVDGQPAAGGMLLQVLPAQDAQTNDFEHLATLTETIKAEELFNLSATDVLWRLYHEEEVTVYDPQAVEFKCTCSRERCAGALKTLPDEEIDSIMAEDGEIDMHCDYCGTHYVFNSMDIAEIRNNASPADPQVH
>NZ_CP040827.1|WP_013099083.1|3225068_3225470_-|ribosome-associated-heat-shock-protein-Hsp15
MKEKPSDGVRLDKWLWAARFYKTRALAREMIDGGKVHYNGQRSKPSKLVELNATLTLRQGNDERTVVIKAITEQRRPASEAVQLYEETAESIEKREKTALARKMNALTMPHPDRRPDKKERRDLMKFKHGETE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP040827_1	1.1\|1193884\|32\|NZ_CP040827\|CRISPRCasFinder	1193884-1193915	32	NZ_CP040827.1	762049-762080	0	1.0
NZ_CP040827_1	1.1\|1193884\|32\|NZ_CP040827\|CRISPRCasFinder	1193884-1193915	32	NZ_CP040827.1	833167-833198	0	1.0
NZ_CP040827_1	1.1\|1193884\|32\|NZ_CP040827\|CRISPRCasFinder	1193884-1193915	32	NZ_CP040827.1	1415819-1415850	0	1.0
NZ_CP040827_1	1.1\|1193884\|32\|NZ_CP040827\|CRISPRCasFinder	1193884-1193915	32	NZ_CP040827.1	1657695-1657726	0	1.0
NZ_CP040827_1	1.1\|1193884\|32\|NZ_CP040827\|CRISPRCasFinder	1193884-1193915	32	NZ_CP040827.1	2368629-2368660	0	1.0
NZ_CP040827_3	3.1\|3211181\|32\|NZ_CP040827\|CRISPRCasFinder	3211181-3211212	32	NZ_CP040827.1	762049-762080	0	1.0
NZ_CP040827_3	3.1\|3211181\|32\|NZ_CP040827\|CRISPRCasFinder	3211181-3211212	32	NZ_CP040827.1	833167-833198	0	1.0
NZ_CP040827_3	3.1\|3211181\|32\|NZ_CP040827\|CRISPRCasFinder	3211181-3211212	32	NZ_CP040827.1	1415819-1415850	0	1.0
NZ_CP040827_3	3.1\|3211181\|32\|NZ_CP040827\|CRISPRCasFinder	3211181-3211212	32	NZ_CP040827.1	1657695-1657726	0	1.0
NZ_CP040827_3	3.1\|3211181\|32\|NZ_CP040827\|CRISPRCasFinder	3211181-3211212	32	NZ_CP040827.1	2368629-2368660	0	1.0
NZ_CP040827_1	1.1\|1193884\|32\|NZ_CP040827\|CRISPRCasFinder	1193884-1193915	32	NZ_CP040827.1	2246124-2246155	1	0.969
NZ_CP040827_3	3.1\|3211181\|32\|NZ_CP040827\|CRISPRCasFinder	3211181-3211212	32	NZ_CP040827.1	2246124-2246155	1	0.969
NZ_CP040827_1	1.1\|1193884\|32\|NZ_CP040827\|CRISPRCasFinder	1193884-1193915	32	NZ_CP040827.1	519128-519159	2	0.938
NZ_CP040827_3	3.1\|3211181\|32\|NZ_CP040827\|CRISPRCasFinder	3211181-3211212	32	NZ_CP040827.1	519128-519159	2	0.938

1. spacer 1.1|1193884|32|NZ_CP040827|CRISPRCasFinder matches to position: 762049-762080, mismatch: 0, identity: 1.0

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatgcctgcacggaggaccccctctcccttg	Protospacer
********************************

2. spacer 1.1|1193884|32|NZ_CP040827|CRISPRCasFinder matches to position: 833167-833198, mismatch: 0, identity: 1.0

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatgcctgcacggaggaccccctctcccttg	Protospacer
********************************

3. spacer 1.1|1193884|32|NZ_CP040827|CRISPRCasFinder matches to position: 1415819-1415850, mismatch: 0, identity: 1.0

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatgcctgcacggaggaccccctctcccttg	Protospacer
********************************

4. spacer 1.1|1193884|32|NZ_CP040827|CRISPRCasFinder matches to position: 1657695-1657726, mismatch: 0, identity: 1.0

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatgcctgcacggaggaccccctctcccttg	Protospacer
********************************

5. spacer 1.1|1193884|32|NZ_CP040827|CRISPRCasFinder matches to position: 2368629-2368660, mismatch: 0, identity: 1.0

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatgcctgcacggaggaccccctctcccttg	Protospacer
********************************

6. spacer 3.1|3211181|32|NZ_CP040827|CRISPRCasFinder matches to position: 762049-762080, mismatch: 0, identity: 1.0

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatgcctgcacggaggaccccctctcccttg	Protospacer
********************************

7. spacer 3.1|3211181|32|NZ_CP040827|CRISPRCasFinder matches to position: 833167-833198, mismatch: 0, identity: 1.0

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatgcctgcacggaggaccccctctcccttg	Protospacer
********************************

8. spacer 3.1|3211181|32|NZ_CP040827|CRISPRCasFinder matches to position: 1415819-1415850, mismatch: 0, identity: 1.0

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatgcctgcacggaggaccccctctcccttg	Protospacer
********************************

9. spacer 3.1|3211181|32|NZ_CP040827|CRISPRCasFinder matches to position: 1657695-1657726, mismatch: 0, identity: 1.0

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatgcctgcacggaggaccccctctcccttg	Protospacer
********************************

10. spacer 3.1|3211181|32|NZ_CP040827|CRISPRCasFinder matches to position: 2368629-2368660, mismatch: 0, identity: 1.0

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatgcctgcacggaggaccccctctcccttg	Protospacer
********************************

11. spacer 1.1|1193884|32|NZ_CP040827|CRISPRCasFinder matches to position: 2246124-2246155, mismatch: 1, identity: 0.969

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatgcctgcacggaggactccctctcccttg	Protospacer
*******************.************

12. spacer 3.1|3211181|32|NZ_CP040827|CRISPRCasFinder matches to position: 2246124-2246155, mismatch: 1, identity: 0.969

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatgcctgcacggaggactccctctcccttg	Protospacer
*******************.************

13. spacer 1.1|1193884|32|NZ_CP040827|CRISPRCasFinder matches to position: 519128-519159, mismatch: 2, identity: 0.938

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatacctgcacggaggactccctctcccttg	Protospacer
****.**************.************

14. spacer 3.1|3211181|32|NZ_CP040827|CRISPRCasFinder matches to position: 519128-519159, mismatch: 2, identity: 0.938

taatgcctgcacggaggaccccctctcccttg	CRISPR spacer
taatacctgcacggaggactccctctcccttg	Protospacer
****.**************.************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1293 : 31544

Vibrio_phage(26.67%)

plate,tail,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151347492.1\|1293_1917_+\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	2.1e-14	37.9
WP_151347493.1\|1955_3425_+\|tail	phage tail protein	R9TMQ0	Vibrio_phage	6.4e-78	45.2
WP_057071470.1\|3421_3928_+\|tail	phage tail protein	NA	NA	NA	NA
WP_151347494.1\|3983_4271_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_151347495.1\|6240_6711_+\|tail	phage tail protein	D4HTW5	Vibrio_phage	1.4e-15	34.9
WP_048701713.1\|6685_6901_+\|tail	tail protein	NA	NA	NA	NA
WP_151347496.1\|6902_8021_+	late control protein D	R9TNM7	Vibrio_phage	7.1e-37	33.4
WP_048701710.1\|8059_8407_+\|plate	baseplate assembly protein	D4HTV2	Vibrio_phage	9.9e-22	49.1
WP_151347497.1\|8396_9311_+\|plate	baseplate assembly protein	A0A193GYM8	Enterobacter_phage	1.2e-63	48.8
WP_151347498.1\|9303_9855_+\|tail	phage tail protein I	A0A0F7LDF3	Escherichia_phage	2.9e-28	44.8
WP_151347499.1\|9857_11618_+	hypothetical protein	K7NS29	Klebsiella_phage	6.4e-16	36.6
WP_151348054.1\|11628_12213_+\|tail	tail fiber assembly protein	A0A192Y8L2	Salmonella_phage	2.8e-45	51.1
WP_151347500.1\|12219_13323_-	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_151348055.1\|13821_14241_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-35	57.5
WP_151347501.1\|14243_15512_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	2.4e-230	92.2
WP_151347502.1\|15693_15939_-	hypothetical protein	NA	NA	NA	NA
WP_151347503.1\|15957_16260_-	hypothetical protein	NA	NA	NA	NA
WP_151347504.1\|16420_17092_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.5e-79	59.0
WP_040022190.1\|17571_18381_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_013096356.1\|18380_19574_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_129327279.1\|19584_20943_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	1.6e-35	39.5
WP_020690934.1\|20946_22542_-	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	A0A0N7IRD9	Acinetobacter_phage	5.0e-52	37.6
WP_029883574.1\|22541_24104_-	anthranilate synthase component 1	NA	NA	NA	NA
WP_106993556.1\|24199_24244_-	trp operon leader peptide	NA	NA	NA	NA
WP_061771733.1\|24383_25265_+	5'-3' exoribonuclease	NA	NA	NA	NA
WP_013096362.1\|25261_25882_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_035942059.1\|26201_26465_-	hypothetical protein	NA	NA	NA	NA
WP_060578708.1\|26454_27603_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_013096363.1\|27986_28862_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA
WP_040022201.1\|28898_29489_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_040022203.1\|30497_31544_+\|protease	protease SohB	A0A2H4UUF9	Bodo_saltans_virus	6.2e-19	28.7

DBSCAN-SWA_2

58224 : 106451

Enterobacteria_phage(37.78%)

terminase,tail,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020690953.1\|58224_58929_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.0e-29	35.9
WP_038419671.1\|58925_59993_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_151347506.1\|60005_60920_-	glycosyl transferase	NA	NA	NA	NA
WP_013096393.1\|61117_61924_-	peptide ABC transporter ATP-binding protein SapF	G3M9Y6	Bacillus_virus	4.6e-14	28.5
WP_013096394.1\|61925_62918_-	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.6e-08	26.5
WP_014832197.1\|65066_65381_-	hypothetical protein	K7PM28	Enterobacteria_phage	2.1e-10	52.5
WP_014832196.1\|65391_65631_-	DUF4060 family protein	K7PHF4	Enterobacteria_phage	5.5e-24	75.6
WP_046887728.1\|65669_66755_-	recombinase RecT	K7PKR8	Enterobacteria_phage	1.3e-123	63.6
WP_151347507.1\|66764_69902_-	exodeoxyribonuclease	K7P6V4	Enterobacteria_phage	0.0e+00	61.5
WP_022651301.1\|70720_71113_-	helix-turn-helix domain-containing protein	K7PM35	Enterobacteria_phage	6.3e-41	63.1
WP_022651300.1\|71212_71440_+	hypothetical protein	A0A0M4QX15	Salmonella_phage	1.6e-20	62.2
WP_045903090.1\|71444_71996_+	regulatory protein	K7PJT7	Enterobacteria_phage	2.9e-31	45.4
WP_077256281.1\|72140_72998_+	hypothetical protein	K7PGZ0	Enterobacteria_phage	2.6e-100	70.4
WP_048254461.1\|72994_73681_+	phage replication protein P	G8C7U6	Escherichia_phage	2.9e-81	62.6
WP_151347508.1\|73667_73850_+	hypothetical protein	NA	NA	NA	NA
WP_014832179.1\|73957_74407_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_014832178.1\|74710_74929_+	hypothetical protein	NA	NA	NA	NA
WP_048254464.1\|75312_75762_+	VOC family protein	NA	NA	NA	NA
WP_014832176.1\|76128_76353_+	DinI family protein	H6WRY5	Salmonella_phage	1.1e-21	62.3
WP_071605448.1\|76504_76702_+	hypothetical protein	K7PHG9	Enterobacteria_phage	1.4e-20	70.5
WP_151347509.1\|76741_77344_+	DUF1367 family protein	H6WRY7	Salmonella_phage	2.0e-94	82.0
WP_049136396.1\|77348_77549_+	hypothetical protein	H6WRY8	Salmonella_phage	1.1e-25	75.8
WP_096927580.1\|77551_77914_+	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	6.8e-50	82.2
WP_096927336.1\|77910_78744_+	antitermination protein	K7PKS8	Enterobacteria_phage	1.3e-125	80.1
WP_020690974.1\|79251_79446_+	hypothetical protein	NA	NA	NA	NA
WP_047361618.1\|80049_80274_+\|lysis	lysis protein	M9NZI9	Enterobacteria_phage	1.6e-28	91.3
WP_047361619.1\|80251_80746_+	lysozyme	M9P0E5	Enterobacteria_phage	8.1e-86	93.9
WP_094084369.1\|80742_81204_+\|lysis	lysis protein	M9NYX9	Enterobacteria_phage	5.8e-46	67.3
WP_151347510.1\|81435_81774_+	hypothetical protein	NA	NA	NA	NA
WP_151347511.1\|82030_82375_-	hypothetical protein	NA	NA	NA	NA
WP_094084367.1\|82428_83415_+\|terminase	terminase small subunit	I6X6R5	Burkholderia_virus	9.9e-35	36.4
WP_151347512.1\|83392_84700_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.1e-145	58.2
WP_151347513.1\|84701_86090_+	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	2.3e-125	49.8
WP_151347514.1\|86091_87189_+	hypothetical protein	I6PD76	Cronobacter_phage	6.5e-120	58.8
WP_094084365.1\|87269_88040_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	9.7e-70	60.0
WP_151347515.1\|88051_89005_+	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	2.6e-133	74.7
WP_062934626.1\|89322_89805_+	hypothetical protein	A0A2I7RQ74	Vibrio_phage	2.5e-07	31.3
WP_151347516.1\|89806_90157_+	hypothetical protein	I6PD77	Cronobacter_phage	2.0e-30	56.0
WP_049136383.1\|90158_90743_+	hypothetical protein	G8C7Q1	Escherichia_phage	3.2e-49	54.2
WP_151347517.1\|90739_91150_+	hypothetical protein	I6PDJ8	Cronobacter_phage	1.5e-32	52.9
WP_063437920.1\|91219_91891_+\|tail	phage tail protein	I6PBN6	Cronobacter_phage	2.0e-50	47.3
WP_063437921.1\|91955_92267_+	hypothetical protein	I6PDG2	Cronobacter_phage	4.1e-35	67.0
WP_032618388.1\|92263_92578_+	hypothetical protein	I6PD79	Cronobacter_phage	5.1e-17	66.7
WP_151347518.1\|92574_95487_+\|tail	phage tail tape measure protein	I6PCW3	Cronobacter_phage	7.5e-139	36.4
WP_020690998.1\|95563_95917_+	hypothetical protein	A0A1V0E5P9	Salmonella_phage	6.0e-59	98.3
WP_048970587.1\|95972_96320_+\|tail	phage tail protein	I6PBN7	Cronobacter_phage	4.9e-37	61.7
WP_151347519.1\|96316_97072_+\|tail	phage minor tail protein L	K7PGX3	Enterobacteria_phage	9.7e-115	76.4
WP_151347520.1\|97073_97787_+	peptidase P60	K7PJX1	Enterobacterial_phage	7.5e-141	95.7
WP_151347521.1\|97937_98429_+	hypothetical protein	NA	NA	NA	NA
WP_022651265.1\|98540_99167_+\|tail	tail assembly protein	K7PH91	Enterobacterial_phage	1.8e-53	59.9
WP_014832155.1\|99219_99936_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_151347522.1\|99989_103544_+	DUF1983 domain-containing protein	K7P7D9	Enterobacteria_phage	0.0e+00	90.3
WP_151347523.1\|103585_103900_+	hypothetical protein	A0A2P0WA17	Enterobacter_phage	4.9e-36	70.6
WP_151347524.1\|103900_104572_+	hypothetical protein	A0A2P0WA07	Enterobacter_phage	3.5e-84	70.9
WP_151347525.1\|104679_104913_+	cor protein	E4WL42	Enterobacteria_phage	2.5e-29	76.3
WP_151347526.1\|104972_106451_+\|tail	phage tail protein	K7P6T0	Enterobacteria_phage	2.6e-140	58.7

DBSCAN-SWA_3

3023613 : 3102056

Escherichia_phage(32.0%)

integrase,transposase

attL 3059126:3059185|attR 3102137:3102276

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000090707.1\|3023613_3024456_+\|transposase	transposase	NA	NA	NA	NA
WP_001324699.1\|3028052_3029609_+\|transposase	transposase	NA	NA	NA	NA
WP_000262423.1\|3029620_3030547_+	hypothetical protein	NA	NA	NA	NA
WP_001097216.1\|3030899_3031199_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001239419.1\|3031762_3033589_+	AAA family ATPase	NA	NA	NA	NA
WP_000647571.1\|3033757_3034108_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	8.1e-16	61.4
WP_000790485.1\|3034255_3034687_-	silver-binding protein SilE	NA	NA	NA	NA
WP_000555736.1\|3034931_3036413_-	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.8e-27	30.1
WP_000697968.1\|3036405_3037086_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.7e-31	36.0
WP_151347807.1\|3037275_3038661_+	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_001246155.1\|3038688_3039042_+	cation efflux system protein CusF	NA	NA	NA	NA
WP_000574029.1\|3040457_3043604_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	NA	NA
WP_000758228.1\|3043690_3044131_+	hypothetical protein	NA	NA	NA	NA
WP_000843494.1\|3046744_3046942_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_151347808.1\|3046975_3047713_-	peptidase M23	A8ATH6	Listeria_phage	1.0e-12	41.0
WP_001023257.1\|3048001_3048451_-	copper resistance protein	NA	NA	NA	NA
WP_001242438.1\|3050500_3051397_+	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_000025662.1\|3051436_3051817_+	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
WP_000998778.1\|3051821_3052751_+	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
WP_001188930.1\|3052805_3053486_+	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4
WP_001211179.1\|3053482_3054883_+	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	3.2e-18	26.6
WP_000723069.1\|3055100_3055535_+	copper resistance system metallochaperone PcoE	NA	NA	NA	NA
3059126:3059185	attL	NA	NA	NA	NA
WP_001067855.1\|3059177_3059882_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
3059126:3059185	attL	NA	NA	NA	NA
WP_078310596.1\|3060142_3060340_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q716C2	Shigella_phage	1.2e-11	57.4
WP_071886836.1\|3060407_3060623_-	hypothetical protein	NA	NA	NA	NA
WP_031942322.1\|3060703_3061372_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_013851371.1\|3063185_3063689_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_001067855.1\|3063725_3064430_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_071886840.1\|3064488_3064956_+	restriction endonuclease	NA	NA	NA	NA
WP_001749967.1\|3064960_3065167_+	hypothetical protein	NA	NA	NA	NA
WP_001288432.1\|3065548_3066982_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
WP_024139167.1\|3068235_3068448_-	hypothetical protein	NA	NA	NA	NA
WP_001389365.1\|3068489_3069254_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001144737.1\|3069396_3069663_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_004201280.1\|3069883_3070357_-	trimethoprim-resistant dihydrofolate reductase DfrA14	A0A140HLG8	Bacillus_phage	5.3e-18	33.8
WP_000845048.1\|3070512_3071526_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_015344971.1\|3071494_3071779_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|3072071_3072776_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_014386481.1\|3073648_3074293_-	quinolone resistance pentapeptide repeat protein QnrB1	NA	NA	NA	NA
3072769:3073589	attR	NA	NA	NA	NA
WP_001067855.1\|3079065_3079770_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
3072769:3073589	attR	NA	NA	NA	NA
WP_002063889.1\|3080963_3081506_-	AAA family ATPase	NA	NA	NA	NA
WP_000557452.1\|3081518_3082379_-	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA
WP_001067855.1\|3082485_3083190_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001334766.1\|3083821_3084652_-	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
WP_063840321.1\|3084782_3085337_-	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
WP_001067855.1\|3085480_3086185_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001393253.1\|3088506_3088839_+	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
WP_000239590.1\|3088885_3089761_-	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
WP_000608644.1\|3090016_3091279_-\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_001235713.1\|3091842_3092400_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_000027057.1\|3092582_3093443_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001120891.1\|3093652_3094192_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000480968.1\|3094163_3095000_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082319.1\|3094999_3095803_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_001043260.1\|3095863_3096679_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_000954592.1\|3097008_3097185_+	DUF4102 domain-containing protein	T1S9J3	Salmonella_phage	1.0e-06	68.6
WP_000427619.1\|3097366_3098371_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_001067855.1\|3100267_3100972_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000845039.1\|3101042_3102056_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
3102137:3102276	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3546313 : 3570845

Erwinia_phage(40.74%)

tRNA,plate,tail,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040021848.1\|3546313_3546889_-	phage repressor protein CI	A0A218M4J1	Erwinia_phage	1.7e-66	63.8
WP_014833350.1\|3547021_3547285_+	hypothetical protein	A0A218M4I5	Erwinia_phage	3.2e-41	96.5
WP_023619964.1\|3547317_3547656_+	hypothetical protein	A0A218M4I7	Erwinia_phage	5.4e-41	74.8
WP_038420649.1\|3547723_3547951_+	DUF2732 domain-containing protein	A0A0M3UL87	Salmonella_phage	6.4e-14	62.7
WP_038420647.1\|3547950_3548172_+	TraR/DksA family transcriptional regulator	A0A0M4S5Q7	Salmonella_phage	3.9e-24	72.2
WP_023619960.1\|3550242_3550683_+	DinI family protein	A0A218M4I0	Erwinia_phage	5.6e-54	76.6
WP_028027926.1\|3550848_3551052_+\|tail	tail protein X	Q858W3	Yersinia_virus	2.3e-23	74.6
WP_020689436.1\|3551042_3551264_+	primosomal protein	A0A218M4L5	Erwinia_phage	7.9e-25	73.6
WP_048971891.1\|3551247_3551757_+	lysozyme	A0A218M4K3	Erwinia_phage	1.8e-72	80.2
WP_151347830.1\|3551753_3552167_+\|lysis	LysB family phage lysis regulatory protein	A0A218M4K2	Erwinia_phage	1.9e-35	59.6
WP_072039866.1\|3552138_3552312_+\|lysis	phage lysis protein	S4TNY4	Salmonella_phage	3.1e-16	72.7
WP_102752654.1\|3552274_3552742_+\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	9.8e-49	62.3
WP_020689441.1\|3553494_3553845_+\|plate	baseplate assembly protein	A0A0M4RE59	Salmonella_phage	2.6e-38	70.7
WP_038420635.1\|3553850_3554759_+\|plate	baseplate assembly protein	Q6K1H4	Salmonella_virus	3.2e-128	80.5
WP_020689443.1\|3554751_3555282_+\|tail	phage tail protein I	Q37841	Escherichia_phage	2.0e-90	86.9
WP_151347831.1\|3556951_3557338_+	hypothetical protein	NA	NA	NA	NA
WP_038420630.1\|3557347_3557854_+\|tail	tail fiber assembly protein	F1BUK2	Cronobacter_phage	1.7e-43	52.7
WP_040021829.1\|3557977_3559171_+\|tail	phage tail sheath protein	U5N3V0	Enterobacteria_phage	2.0e-186	81.4
WP_014833332.1\|3559182_3559701_+\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	4.5e-79	80.8
WP_038420626.1\|3559756_3560065_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.6e-26	70.1
WP_151347832.1\|3560097_3560217_+\|tail	GpE family phage tail protein	O80316	Escherichia_phage	2.8e-13	87.2
WP_151347833.1\|3560209_3562657_+\|tail	phage tail tape measure protein	M1T2S3	Escherichia_phage	9.4e-135	37.8
WP_014833328.1\|3562668_3563133_+\|tail	phage tail protein	O80317	Escherichia_phage	4.6e-59	70.4
WP_151347834.1\|3563129_3564275_+	phage late control D family protein	A0A218M4J7	Erwinia_phage	2.3e-131	62.3
WP_014833326.1\|3564341_3564542_+	transcriptional regulator	A0A2I8TV89	Erwinia_phage	5.3e-20	77.4
WP_020689452.1\|3564896_3565403_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_013098777.1\|3565505_3567353_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_014833324.1\|3567517_3569263_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.7e-77	39.2
WP_001144069.1\|3569379_3569595_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_013098775.1\|3569831_3570845_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	8.2e-109	58.6

DBSCAN-SWA_5

3798415 : 3806404

Enterobacteria_phage(50.0%)

integrase

attL 3799244:3799262|attR 3811037:3811055

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094084804.1\|3798415_3799108_+	peptidoglycan DD-metalloendopeptidase family protein	A0A7K9	Microcystis_virus	2.0e-10	37.0
3799244:3799262	attL	NA	NA	NA	NA
WP_025912448.1\|3799426_3800641_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	4.8e-140	59.3
WP_025912447.1\|3800783_3801587_+	hypothetical protein	NA	NA	NA	NA
WP_025912446.1\|3801774_3801996_+	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_023301290.1\|3802016_3802589_+	hypothetical protein	A0A1W6JPH8	Morganella_phage	1.6e-56	65.7
WP_086519776.1\|3802637_3802817_-	hypothetical protein	A0A2H4JB52	uncultured_Caudovirales_phage	4.4e-10	56.9
WP_071531908.1\|3802946_3803135_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_025912445.1\|3803127_3804003_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_020686326.1\|3804118_3804322_+	hypothetical protein	K7PHG9	Enterobacteria_phage	5.8e-14	54.8
WP_023325055.1\|3804332_3804647_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_151347848.1\|3804643_3806404_+	DNA primase	Q7M2A8	Enterobacteria_phage	8.6e-106	43.9
3811037:3811055	attR	NA	NA	NA	NA

DBSCAN-SWA_6

4591842 : 4599587

Ostreococcus_lucimarinus_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095427554.1\|4591842_4593249_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	1.8e-37	28.3
WP_095427555.1\|4593344_4594430_+	dTDP-glucose 4,6-dehydratase	A0A291LAD7	Escherichia_phage	1.6e-97	51.6
WP_095427556.1\|4594429_4595311_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.1e-105	63.8
WP_095427557.1\|4595538_4596705_+	UDP-glucose 6-dehydrogenase	A0A1J0FA55	Only_Syngen_Nebraska_virus	1.6e-111	53.5
WP_151347970.1\|4596757_4597762_-	NAD-dependent epimerase	A0A2K9L4U8	Tupanvirus	5.0e-34	30.4
WP_151347971.1\|4597955_4598936_+	LPS O-antigen chain length determinant protein WzzB	NA	NA	NA	NA
WP_000954830.1\|4598975_4599587_-	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	A0A2H4UVM0	Bodo_saltans_virus	6.0e-14	29.3

DBSCAN-SWA_7

4702479 : 4727510

Pectobacterium_phage(33.33%)

integrase,tail

attL 4696890:4696906|attR 4719143:4719159

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4696890:4696906	attL	NA	NA	NA	NA
WP_096896928.1\|4702479_4703496_-\|integrase	tyrosine-type recombinase/integrase	H9C152	Pectobacterium_phage	1.4e-124	63.7
WP_151347981.1\|4703479_4703728_-	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	1.3e-07	42.3
WP_151347982.1\|4703663_4703888_-	hypothetical protein	H9C154	Pectobacterium_phage	1.1e-10	56.3
WP_151347983.1\|4703938_4704121_-	hypothetical protein	NA	NA	NA	NA
WP_151347984.1\|4704123_4704684_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	1.3e-47	57.4
WP_151348071.1\|4704680_4706897_-	hypothetical protein	H9C157	Pectobacterium_phage	1.2e-99	34.0
WP_078309707.1\|4706934_4707180_-	hypothetical protein	A0A1B1W282	Salmonella_phage	1.8e-14	56.2
WP_078309709.1\|4707187_4707511_-	hypothetical protein	NA	NA	NA	NA
WP_151347985.1\|4708044_4708500_-	helix-turn-helix domain-containing protein	A0A0U2QW76	Escherichia_phage	2.8e-32	49.3
WP_151347986.1\|4708606_4708840_+	helix-turn-helix domain-containing protein	A0A0U2S629	Escherichia_phage	7.3e-13	51.4
WP_151347987.1\|4708905_4709352_+	hypothetical protein	H9C162	Pectobacterium_phage	5.9e-27	52.5
WP_151347988.1\|4709373_4709598_+	hypothetical protein	H9C163	Pectobacterium_phage	2.0e-20	64.9
WP_151347989.1\|4710653_4712042_+	replicative DNA helicase	Q8HA30	Enterobacteria_phage	1.1e-108	48.0
WP_017384463.1\|4712763_4713012_+	hypothetical protein	NA	NA	NA	NA
WP_151347990.1\|4713004_4713457_+	hypothetical protein	F1C5B6	Cronobacter_phage	9.2e-12	40.6
WP_151347991.1\|4713566_4713959_+	hypothetical protein	NA	NA	NA	NA
WP_151347992.1\|4713951_4714290_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.2e-37	69.6
WP_151347993.1\|4714465_4714657_+	hypothetical protein	NA	NA	NA	NA
WP_151347994.1\|4714725_4715322_+	DUF1367 family protein	H9C173	Pectobacterium_phage	1.0e-79	71.7
WP_151347995.1\|4715333_4715636_+	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	4.4e-26	53.7
WP_017384458.1\|4715791_4716082_+	hypothetical protein	NA	NA	NA	NA
WP_151347996.1\|4716118_4716604_+	hypothetical protein	NA	NA	NA	NA
WP_015571350.1\|4716617_4716848_+	hypothetical protein	NA	NA	NA	NA
WP_151347997.1\|4716851_4718477_+\|tail	phage tail protein	A0A2H4J3N6	uncultured_Caudovirales_phage	8.7e-169	58.5
WP_001619031.1\|4718473_4718707_+	hypothetical protein	NA	NA	NA	NA
WP_151347998.1\|4718693_4719530_+	hypothetical protein	A0A2H4JEQ5	uncultured_Caudovirales_phage	4.3e-47	43.8
4719143:4719159	attR	NA	NA	NA	NA
WP_151347999.1\|4719743_4720118_+	hypothetical protein	A0AR14	Salmonella_phage	5.4e-42	72.9
WP_151348000.1\|4720356_4721268_+	hypothetical protein	A0A2H4JC66	uncultured_Caudovirales_phage	7.8e-42	37.2
WP_078309733.1\|4721324_4721888_+	hypothetical protein	A0A2H4JID6	uncultured_Caudovirales_phage	1.6e-50	51.9
WP_151348001.1\|4721889_4723878_+	hypothetical protein	A0A2H4J6H2	uncultured_Caudovirales_phage	3.1e-184	48.5
WP_078309737.1\|4723879_4724329_+	GNAT family N-acetyltransferase	A0A2H4J9Z5	uncultured_Caudovirales_phage	3.4e-22	42.3
WP_017384448.1\|4724331_4724799_+	hypothetical protein	A0A2H4J679	uncultured_Caudovirales_phage	3.2e-07	46.8
WP_151348002.1\|4724801_4727510_+	lytic transglycosylase	G9L6D3	Escherichia_phage	0.0e+00	64.5

DBSCAN-SWA_8

4730823 : 4738268

uncultured_Caudovirales_phage(33.33%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151348003.1\|4730823_4731165_+	hypothetical protein	A0A2H4J7H0	uncultured_Caudovirales_phage	2.5e-22	53.6
WP_151348004.1\|4731161_4732772_+	transcriptional regulator	A0A2H4JCA3	uncultured_Caudovirales_phage	6.5e-225	70.3
WP_151348005.1\|4732792_4733248_+	hypothetical protein	A0A2H4J3Z5	uncultured_Caudovirales_phage	1.7e-18	40.7
WP_151348006.1\|4733268_4735047_+	hypothetical protein	B3VCX0	Enterobacteria_phage	1.2e-19	60.2
WP_151348007.1\|4735185_4735416_+\|holin	holin	A5LH82	Enterobacteria_phage	3.8e-22	69.6
WP_151348008.1\|4735396_4735936_+	lysozyme	K7PM52	Enterobacteria_phage	4.8e-92	90.8
WP_151348009.1\|4735932_4736292_+	hypothetical protein	R9TPM9	Aeromonas_phage	1.0e-13	45.5
WP_013096030.1\|4736679_4737396_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.0e-12	26.1
WP_057072613.1\|4737392_4738268_-	ATP-binding cassette domain-containing protein	A0A285PWH2	Cedratvirus	3.1e-11	25.5

DBSCAN-SWA_9

5022494 : 5031185

Enterobacteria_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151348039.1\|5022494_5022755_+	DUF977 family protein	H6WRX9	Salmonella_phage	3.4e-27	70.2
WP_151348040.1\|5023025_5024033_+	hypothetical protein	NA	NA	NA	NA
WP_151348041.1\|5024051_5024597_-	hypothetical protein	NA	NA	NA	NA
WP_151348042.1\|5024909_5025236_+	hypothetical protein	K7PGV5	Enterobacterial_phage	7.3e-19	47.6
WP_151348043.1\|5025408_5025627_+	hypothetical protein	NA	NA	NA	NA
WP_151348044.1\|5025771_5026065_+	hypothetical protein	Q6V7S4	Burkholderia_virus	3.0e-19	55.8
WP_151348045.1\|5026057_5026426_+	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	1.2e-38	61.7
WP_151348046.1\|5026418_5026772_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	3.8e-53	84.1
WP_151348047.1\|5026780_5027821_-	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	3.7e-64	40.1
WP_151348048.1\|5027833_5029615_-	ATP-binding protein	NA	NA	NA	NA
WP_048338962.1\|5029833_5030136_+	hypothetical protein	O64361	Escherichia_phage	1.4e-32	68.3
WP_151348049.1\|5030666_5031185_+	hypothetical protein	K7PHH7	Enterobacteria_phage	3.3e-74	83.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP040827

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection