CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP040231	Streptococcus sp. 1643 chromosome, complete genome	2 crisprs	DEDDh,csa3,cas3,DinG	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP040231_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040231_1

650795-650869

Orphan

Consensus_repeat	Method
GAGAGCGAGGTTTGATTTTGTAAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040231_1

>merge|NZ_CP040231|1|650795-650869|CRISPRCasFinder
GAGAGCGAGGTTTGATTTTGTAAATCATTTTTTCCCGAGCCCGGAAATGCGAGAGCGAGGTATGATTTTGTAAAT

>NZ_CP040231|1|1|650795-650869|CRISPRCasFinder
GAGAGCGAGGTTTGATTTTGTAAAT	CATTTTTTCCCGAGCCCGGAAATGC
GAGAGCGAGGTATGATTTTGTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040231.1\|WP_139658492.1\|656969_657599_+\|endonuclease-III	unknown	unknown	gnl\|CDD\|223255
NZ_CP040231.1\|WP_139658480.1\|646682_647408_+\|proteinase	unknown	unknown	gnl\|CDD\|291192
NZ_CP040231.1\|WP_139658481.1\|647404_648340_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP040231.1\|WP_001016817.1\|642780_643605_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225375
NZ_CP040231.1\|WP_000850018.1\|657809_658331_+\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	unknown	unknown	gnl\|CDD\|235365
NZ_CP040231.1\|WP_139658490.1\|656426_656969_+\|DUF177-domain-containing-protein	unknown	unknown	gnl\|CDD\|224317
NZ_CP040231.1\|WP_076984457.1\|649298_650618_-\|uracil-permease	unknown	unknown	gnl\|CDD\|236744
NZ_CP040231.1\|WP_139658485.1\|652241_653141_+\|zinc-metalloprotease-HtpX	unknown	unknown	gnl\|CDD\|235318
NZ_CP040231.1\|WP_139658484.1\|650872_651586_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_CP040231.1\|WP_139658478.1\|641429_642644_+\|tRNA-4-thiouridine(8)-synthase-ThiI	unknown	unknown	gnl\|CDD\|234960
NZ_CP040231.1\|WP_139658487.1\|654038_655598_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP040231.1\|WP_139658477.1\|640278_641421_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|224029
NZ_CP040231.1\|WP_139658483.1\|648348_649254_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP040231.1\|WP_139658486.1\|653251_653848_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP040231.1\|WP_139658489.1\|655928_656258_-\|helicase-BlpT	unknown	unknown	unknown
NZ_CP040231.1\|WP_139658479.1\|644378_645545_+\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|223516
NZ_CP040231.1\|WP_000219840.1\|651679_652240_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|224618
NZ_CP040231.1\|WP_049477633.1\|645702_646572_+\|aquaporin-family-protein	unknown	unknown	gnl\|CDD\|223653
NZ_CP040231.1\|WP_139658493.1\|658349_659273_+\|aspartate-carbamoyltransferase-catalytic-subunit	unknown	unknown	gnl\|CDD\|234849
NZ_CP040231.1\|WP_042902431.1\|643625_644366_+\|esterase-family-protein	unknown	unknown	gnl\|CDD\|227283

Protein	Function_ID	Function_description	E-value
NZ_CP040231.1\|WP_139658492.1\|656969_657599_+\|endonuclease-III	gnl\|CDD\|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	2.00175e-104
NZ_CP040231.1\|WP_139658480.1\|646682_647408_+\|proteinase	gnl\|CDD\|291192	pfam14506, CppA_N, CppA N-terminal. This is the N-terminal domain of the CppA protein found in species of Streptococcus. CppA is a putative C3-glycoprotein degrading proteinase, involved in pathogenicity. It is often found associated with pfam14507.	3.04927e-50
NZ_CP040231.1\|WP_139658481.1\|647404_648340_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.20324e-54
NZ_CP040231.1\|WP_001016817.1\|642780_643605_+\|alpha/beta-hydrolase	gnl\|CDD\|225375	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only].	5.8904e-95
NZ_CP040231.1\|WP_000850018.1\|657809_658331_+\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	gnl\|CDD\|235365	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR.	2.52523e-86
NZ_CP040231.1\|WP_139658490.1\|656426_656969_+\|DUF177-domain-containing-protein	gnl\|CDD\|224317	COG1399, COG1399, Predicted metal-binding, possibly nucleic acid-binding protein [General function prediction only].	1.98782e-40
NZ_CP040231.1\|WP_076984457.1\|649298_650618_-\|uracil-permease	gnl\|CDD\|236744	PRK10720, PRK10720, uracil transporter; Provisional.	5.05259e-123
NZ_CP040231.1\|WP_139658485.1\|652241_653141_+\|zinc-metalloprotease-HtpX	gnl\|CDD\|235318	PRK04897, PRK04897, heat shock protein HtpX; Provisional.	0
NZ_CP040231.1\|WP_139658484.1\|650872_651586_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	2.78918e-86
NZ_CP040231.1\|WP_139658478.1\|641429_642644_+\|tRNA-4-thiouridine(8)-synthase-ThiI	gnl\|CDD\|234960	PRK01565, PRK01565, thiamine biosynthesis protein ThiI; Provisional.	0
NZ_CP040231.1\|WP_139658487.1\|654038_655598_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	3.85345e-104
NZ_CP040231.1\|WP_139658477.1\|640278_641421_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	0
NZ_CP040231.1\|WP_139658483.1\|648348_649254_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	3.90436e-23
NZ_CP040231.1\|WP_139658486.1\|653251_653848_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	3.48018e-12
NZ_CP040231.1\|WP_139658479.1\|644378_645545_+\|ATP-grasp-domain-containing-protein	gnl\|CDD\|223516	COG0439, AccC, Biotin carboxylase [Lipid metabolism].	2.22601e-11
NZ_CP040231.1\|WP_000219840.1\|651679_652240_+\|LemA-family-protein	gnl\|CDD\|224618	COG1704, LemA, Uncharacterized conserved protein [Function unknown].	9.72926e-86
NZ_CP040231.1\|WP_049477633.1\|645702_646572_+\|aquaporin-family-protein	gnl\|CDD\|223653	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism].	1.42321e-73
NZ_CP040231.1\|WP_139658493.1\|658349_659273_+\|aspartate-carbamoyltransferase-catalytic-subunit	gnl\|CDD\|234849	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit.	2.88822e-164
NZ_CP040231.1\|WP_042902431.1\|643625_644366_+\|esterase-family-protein	gnl\|CDD\|227283	COG4947, COG4947, Uncharacterized protein conserved in bacteria [Function unknown].	2.21993e-127

>NZ_CP040231.1|WP_076984457.1|649298_650618_-|uracil-permease
MGSFLVPKSEVFMKQESTVDLLLDVDQRPSAGKGILLSFQHVFAMFGATILVPLILGMPVSVALFASGIGTLIYMISTGFKVPVYLGSSFAFITAMSLAMKEMGGDVSAAQTGVILTGFVYVLVAASVRFAGTKWIDKLLPPIIIGPMIIVIGLGLAGSAVTNAGLVADGNWKNALVAVVTFLIAAFINTKGKGFLRIIPFLFAIIGGYIFAMMLGLVDFTPVLQANWFEIPGFYLPFSTGGAFKEYNLYFGPETIAILPIAIVTISEHIGDHTVLSQICGRQFLKEPGLHRTLLGDGIATSVSAFLGGPANTTYGENTGVIGMTRIASVSVIRNAAFIAIALSFLGKFTALISTIPNAVLGGMSILLYGVIASNGLKVLIKERVDFSQMRNLIIASAMLVLGLGGAILKLGPVTLSGTALSAMTGIILNLILPHENKD
>NZ_CP040231.1|WP_139658483.1|648348_649254_+|EamA-family-transporter
MSKTVKGTLYTVVAGIAWGLSGTSGQYLMVHGISALVLTNLRLIIAGLALVFLSYTTSKDKLYAFLKDRKSLLSLLLFALFGLFLNQFAYLSAIQETNAGTATVLQYVCPVGILVYTCIKDKVAPTLAEIISIGLAIGGTFLIVTHGELDQLSVTPAGLFWGLFSALTYALYIILPIALIKKWGSILVIGVGMVISGVVALPFTGVLQASIPTSLDFLFAFAGIIIIGTVFAYTAFLKGASLIGPVKSSLLASIEPISAVFFAFLIMKEQFYAIDFVGMAMILLAVTIISLKDLLLEIKSK
>NZ_CP040231.1|WP_139658481.1|647404_648340_+|serine-hydrolase
MKLEKILRKIENQIEAGIYPGASFAYYKDGEWKESYLGLSDSERDLKTESGLVYDLASVSKVVGVGTVFTFLWQQGKLDIDRPVTDFLPECDYPDITIRQLLTHATDLDPFIPNRDKLSAEELREAMFHLNRRSQPAFLYSDVHFLLLGFLLEKIFDQDLDQIIEEQVLKPWGMMGTKFGPVEQAVPTVRGVEAGNIHDPKARLLGKHAGSAGLFSTVKDLQIFLEHYLKDDFAAELSRNFSPLDDKERSLAWNLEGAWLDHTGYTGTFIMWNRDKQEAAIFLSNRTYEKDERAQWIVDRNQVMEMIRQGE
>NZ_CP040231.1|WP_139658480.1|646682_647408_+|proteinase
MNVNEIVRIVPTLKVNNRKLNEKFYIETLGMKPLLEESAFISLGDQTATERLILEEAPSMRTRKVEGLKKLARLLIKVENPSEIEALLSQMKSLPRLFKGNRGYAFEIVSPEEDVILVHAEDDIRDLVPLETVPEFYSNTSIKYVSQFEVSTELHLPEGTESLLDPEGVAPAITFTKGQGPDLAVENNVTWDLTMLKFLVRNFDLTSLRQKFEKTGYFVPKSEKFFLGKDTNNIELWFEEA
>NZ_CP040231.1|WP_049477633.1|645702_646572_+|aquaporin-family-protein
MDFTWAIKYATEFLGTAILIILGNGAVANVELKGTKGHQSGWLVIAVGYGMGVMIPALMFGNVSGNHINPAFTLGLAVSGLFSWDQVPFYILAQVLGAIFGQALVVATHRPYYLKTENPNNILGTFSTISSIDHGTKESRFAATVNGFLNEFVGSFVLFFAALGLTKNFFGAEVLQYMKQMATQAGQTVDLSELAVKAQVAPHTAAGISVAHLALGFLVMALVTSLGGPTGPGLNPARDFGPRLLHELLPKSVLGQHKGDSKWWYAWVPVVAPIAAGIAAVALFKLLYL
>NZ_CP040231.1|WP_139658479.1|644378_645545_+|ATP-grasp-domain-containing-protein
MNYLVISPYYPQNFQQFTIELANKGITVLGIGQEPYEQLDEPLRNSLTEYFRVDNLENIDEVKRAVAFLFYKHGPIDRIESHNEYWLELDAALREQFNVFGAKPEDLKKTKFKSEMKKLFKKAGVPVVPGAVIHTEADVDKAVNEIGLPMIAKPDNGVGAAATFKLETEDDVNHFKAEWDHSTVYFFEKFVTSSEICTFDGLVDKDGNIVFSTTFDYAHTPLDLMIYKMDNSYYVLKDMDPKLRKYGEAIVKEFGMKERFFHIEFFRDGDDYIAIEYNNRPAGGFTIDVYNFAHSLDLYRGYAAIVAGEEFPASEFEPQYCLATSRRANANYVYSEENLLAKYSQQFKVKKIMPAAFAELQGDYLYMLTTPSRQEMEQMIADFGQRQE
>NZ_CP040231.1|WP_042902431.1|643625_644366_+|esterase-family-protein
MHIENLSHWSGHLNREMYLNRYGHAGIPVVVFASSGGSHNEYYDFGMIDACASFIEEGRVQFFTLSSVDSESWLATWKNGHDQAEMHRAYERYVIEEAIPFIKHKTGWFDGMMTTGCSMGAYHALNFFLQHPDVFTKVIALSGVYDARFFVGDYYNDDAIYQNSPVDYIWNQNDGWFIDRYRQAEIVVCTGLGAWEQDGLPSFYKLKEAFDQKQIPAWFAEWGHDVAHDWEWWRKQMPYFLGHLYL
>NZ_CP040231.1|WP_001016817.1|642780_643605_+|alpha/beta-hydrolase
MNHSYFYLKMKEHKLKVPYTGKERRVRVLLPKDYEKDTDRFYPVVYFHDGQNVFYSKESYIGHSWKIIPAIKRNPDISRMIVVAIDNDGMGRMNEYAAWKFQESPIPGQQFGGKGVEYAEFVMEVVKPFIDETYRTKADRQHTAMIGSSLGGNITQFIGLEYQDRIGCLGVFSSANWLHQEAFNRYIERKKLSPEQRIFIYVGTEEADDTDKTLMAGNIKQAYIDSSLRYYRDLIAGGVHLDNLVLKVQSGAIHSEIPWSENLPDCLRFFAEKW
>NZ_CP040231.1|WP_139658478.1|641429_642644_+|tRNA-4-thiouridine(8)-synthase-ThiI
MQYSEIMIRYGELSTKHKNRMRFINKLRNNISDVLSIYPQVKVTADRDRAHAYLNGADYTAVAESLKQVFGIQNFSPVYKIEKSVDVLKSAVQEIMKEIYKEGMTFKITSKRSDHNFELDSRELNQTLGGAVFEAIPNVQAQMKNPDINLQVEIREEAAYLSYETFRGAGGLPVGSSGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHFASPPYTSPGALKKAHDLTRKLTKFGGNIQFIEVPFTEIQEEIKAKAPEAYLMTLTRRFMMRITDRIREIRNGLIIINGESLGQVASQTLESMQTINAVTSTPVIRPVVTMDKLEIIDIAQEIDTFEISIQPFEDCCTIFAPDRPKTNPKIENAEQYEKRMDVEGLVERAVAGIMITKITPQAEKDAVDELIDNLL
>NZ_CP040231.1|WP_139658477.1|640278_641421_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MIYFDNSATTKPYPEALETYMQVASKIVGNPSSLHRLGDQATRILDASRQQIADLIGKKSDEIFFTSGGTEGDNWVIKGVAFEKAQFGKHIIVSAIEHPAVKESALWLKSQGFEIDFTPVDEKGFVDVEALADLIRPDTTLVSIMAVNNEIGSIQPIEAISKLLEDKPTISFHVDAVQALAKIPTEKYLTDRVDFATFSSHKFHGVRGVGFVYIKSGKKITPLLTGGGQERDYRSTTENVAGIAATAKALRLVMEKLDLFTSKTGQMKAVIRQALLDYPDIFVFSDEEDFAPHILTFGIKGVRGEVIVHAFEDYDIFISTTSACSSKAGKPAGTLIAMGVDKDKAQSAVRLSLDLENDMSQVEQFLTKLKLIYNQTRKVR
>NZ_CP040231.1|WP_139658484.1|650872_651586_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MKPETFYSLLAEQNLPLSDQQKNQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIQNENIKLLDIGAGAGFPSLPMKILYPQLDVTIIDSLNKRINFLQLLAQELDLDGVHFYHGRAEDFAQDKNFRAQFDVVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNGDPRYITVVEKKKETPNKYPRKAGMPNKRPL
>NZ_CP040231.1|WP_000219840.1|651679_652240_+|LemA-family-protein
MTWIILGVLALIVIFVIVSYNGLVKNRMQTKEAWSQIDVQLKRRNDLLPNLIETVKGYAKYEGSTLEKVTELRRQVAAATSPAEAMKASDALTRQISGIFAVAENYPDLKASANFIKLQEELTNTENKISYSRQLYNSVVSNYNVKLESFPSNVIAGLFGFKAADFLQTPEEEKAVPKVDFSGLGD
>NZ_CP040231.1|WP_139658485.1|652241_653141_+|zinc-metalloprotease-HtpX
MLFDQIASNKRKTWILLLVFFLLLTLVGYAVGYLFMRSGLGGMIIALIIGLIYALTMIFQSTEIVMSMNGAREVDEQTAPDLYHVVEDMAMVAQIPMPRVFIIEDSSLNAFATGSNPQNAAVAATSGLLAIMNREELEAVMGHEVSHIRNYDIRISTIAVALASAITLLSSMAGRMMWWGGAGRRRSDNDRDGNGLEIIMLVISLLAIVLAPLAATLVQLAISRQREFLADASSVELTRNPQGMINALRKLENSDPMHHHVDDASSALYINDPKKGGGLQKLFYTHPPISERIERLKHM
>NZ_CP040231.1|WP_139658486.1|653251_653848_+|CPBP-family-intramembrane-metalloprotease
MYKRWMTFFLILIFMPIHLSIAEKIMRINSLPLSILFTLVELALFLYVGKKYDLFHIRKIYLKDILKCFLSYALLFLFYIMVNFLGPTQSDTTQTVQSLSLSWSVLFVDLCVLAPVTEEIFMRGMLQGLVFKNTYFGLFATSLLFAYLHGPYTIPSFISYLGMGFAFGVRYKTSDNLWNSILLHVLNNLVAFCFLYMR
>NZ_CP040231.1|WP_139658487.1|654038_655598_-|ATP-binding-cassette-domain-containing-protein
MQYRHSRKGKNMIKINHLTITQNKDLRDLVSDLTTTIQDGEKVAIIGEEGNGKSTLLRALMGEALPDFTIKGDIQSDLQSLAYIPQKLPEILKNRTLHDYFFLDSADLDYSILYRLAEELHFDSDRFASDQEIGSLSGGESLKIQLIHELAKPFEILFLDEPSNDLDLETVDWLKGQIRKIRQTVIFISHDEDFLSQTADTIVHLRLVKHRKEAETLVEHLDYDRYSEQRKANFARQSQQAANDQRAYDKTMEKHRRVKQNVETALRATKDSTAGRLLAKKMKTALSQEKRFEKEAQSMTQMPLEEEQIQLFFSDIQPLPSSKVLIQLEKENLSIGKRILAQELQLTVRGQDKIGIIGPNGVGKSTLLTKLQQLLSAKREISLGFMPQDYHKKLQLDLSPVAYLSQTGEKEELQKIQSHLASLNFNYPEMHHQIRSLSGGQQGKLLLLDLVLRKPNFLLLDEPTRNFSPTSQPEIRKLFASYPGGLITVSHDRRFLKEVCTSIYRLTDRGLEVVDLQDL
>NZ_CP040231.1|WP_139658489.1|655928_656258_-|helicase-BlpT
MEDKALITEAYRLLSELNKSYQSCKQGTADDLRLQELLNTTLKELKTAEKLDNSILIDLEKFYQRTSLLIGLGSLKLNDQARTAWRNYDKFHYEHVKHVLTLYGPVFGF
>NZ_CP040231.1|WP_139658490.1|656426_656969_+|DUF177-domain-containing-protein
MKLNIQEIRKQPEGLHFEQALDLAADLCKRNQEILDVKDILAVGKVQYEDRLYFLDYQLSYTIVLASSRSMEPVELAESYPVTEVFMEGATNQLDQEVLDDDLVLPIENGEIDLAESVADNILLNIPIKVLTAEEEAGQGFVSGNDWQIMTEDEYQAQQAVKKEENSPFAGLQGLFDGDE
>NZ_CP040231.1|WP_139658492.1|656969_657599_+|endonuclease-III
MVLSKKRARHVIEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFAAFPTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGRKTANVVMSVGYGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPPEEWLAAHQAMIYFGRAICHPKNPECDHYPQLYDFSNV
>NZ_CP040231.1|WP_000850018.1|657809_658331_+|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR
MKTKEVVDELTVKRAITRITYEIIERNKDLNKIILAGIKTRGVFIAHRIKERLEQLENITVPVVELDTKPFRDDVKSGEDTSLISVDVTDREVILVDDVLYTGRTIRAAIDNIVGHGRPARVSLAVLVDRGHRELPIRPDYVGKNIPTSRSEEIIVEMTELDGQDRVLITEEA
>NZ_CP040231.1|WP_139658493.1|658349_659273_+|aspartate-carbamoyltransferase-catalytic-subunit
MSENQQALNHVVSMEDLTVDQVMKLIKRGIEFKNGAQLPYENKPIVSNLFFEDSTRTHKSFEVAEIKLGLERLDFDVKTSSVNKGETLYDTILTLSALGVDVCVIRHPEVDYYRELIASPSITTSIINGGDGSGQHPSQSLLDLMTIYEEFGHFEGLKVAIAGDLDHSRVAKSNMQILKRLGAELFFAGPEEWRSQEFADYGQFVTIDEIVDQVDVLMLLRVQHERHESGAVFSKEYYHAQHGLNQERYNRLKETAIIMHPAPVNRDVEIADHLVEAPKSRIVQQMTNGVFVRMAILESVLASRNAN

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Crispr_ID: NZ_CP040231_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040231_2

1638735-1638828

Orphan

Consensus_repeat	Method
AAGTTTCCATGAGAACTATTTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040231_2

>merge|NZ_CP040231|2|1638735-1638828|CRISPRCasFinder
TAGTTCTCACAAGAACTATATAAGTTTCCATGAGAACTATTTTATCATTTTCAGAAAAGATGTCAAGAAAAAAGTTTCCAAGAGAACTATTTTA

>NZ_CP040231|2|2|1638735-1638828|CRISPRCasFinder
TAGTTCTCACAAGAACTATATAA	GTTTCCATGAGAACTATTTTATCATTTTCAGAAAAGATGTCAAGAAAA
AAGTTTCCAAGAGAACTATTTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040231.1\|WP_139658960.1\|1630422_1632090_-\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|274671
NZ_CP040231.1\|WP_000060284.1\|1641948_1642503_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP040231.1\|WP_139658968.1\|1647089_1647533_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|223873
NZ_CP040231.1\|WP_000776591.1\|1633583_1634030_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP040231.1\|WP_061421420.1\|1629860_1630412_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040231.1\|WP_000800936.1\|1634143_1634647_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|238813
NZ_CP040231.1\|WP_000725755.1\|1632903_1633578_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274398
NZ_CP040231.1\|WP_000415528.1\|1642634_1642829_-\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200
NZ_CP040231.1\|WP_139658962.1\|1636494_1638264_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP040231.1\|WP_139658963.1\|1638901_1639606_+\|DUF4190-domain-containing-protein	unknown	unknown	gnl\|CDD\|341047
NZ_CP040231.1\|WP_139658965.1\|1644204_1645461_-\|competence/damage-inducible-protein-A	unknown	unknown	gnl\|CDD\|234789
NZ_CP040231.1\|WP_139658966.1\|1645533_1646574_-\|LytR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224235
NZ_CP040231.1\|WP_084877348.1\|1642998_1644150_-\|recombinase-RecA	unknown	unknown	gnl\|CDD\|236476
NZ_CP040231.1\|WP_000216434.1\|1632092_1632458_-\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|224221
NZ_CP040231.1\|WP_139658961.1\|1634744_1636505_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP040231.1\|WP_042769107.1\|1638247_1638709_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_CP040231.1\|WP_139658964.1\|1640468_1641839_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240543
NZ_CP040231.1\|WP_000532894.1\|1639655_1640372_-\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NZ_CP040231.1\|WP_001140948.1\|1632610_1632799_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_CP040231.1\|WP_139658967.1\|1646578_1647100_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP040231.1\|WP_139658960.1\|1630422_1632090_-\|DAK2-domain-containing-protein	gnl\|CDD\|274671	TIGR03599, YloV, DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.	0
NZ_CP040231.1\|WP_000060284.1\|1641948_1642503_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.45498e-06
NZ_CP040231.1\|WP_139658968.1\|1647089_1647533_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	1.28635e-54
NZ_CP040231.1\|WP_000776591.1\|1633583_1634030_-\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	1.01136e-23
NZ_CP040231.1\|WP_139658962.1\|1636494_1638264_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	7.40672e-142
NZ_CP040231.1\|WP_000800936.1\|1634143_1634647_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|238813	cd01610, PAP2_like, PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.	2.05853e-09
NZ_CP040231.1\|WP_000725755.1\|1632903_1633578_-\|hypothetical-protein	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	0.00229237
NZ_CP040231.1\|WP_000415528.1\|1642634_1642829_-\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	1.1179e-22
NZ_CP040231.1\|WP_139658963.1\|1638901_1639606_+\|DUF4190-domain-containing-protein	gnl\|CDD\|341047	cd17504, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.22487e-05
NZ_CP040231.1\|WP_139658965.1\|1644204_1645461_-\|competence/damage-inducible-protein-A	gnl\|CDD\|234789	PRK00549, PRK00549, competence damage-inducible protein A; Provisional.	0
NZ_CP040231.1\|WP_139658966.1\|1645533_1646574_-\|LytR-family-transcriptional-regulator	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	1.398e-89
NZ_CP040231.1\|WP_084877348.1\|1642998_1644150_-\|recombinase-RecA	gnl\|CDD\|236476	PRK09354, recA, recombinase A; Provisional.	0
NZ_CP040231.1\|WP_000216434.1\|1632092_1632458_-\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|224221	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown].	3.81541e-40
NZ_CP040231.1\|WP_139658961.1\|1634744_1636505_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	5.04109e-175
NZ_CP040231.1\|WP_042769107.1\|1638247_1638709_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	1.22301e-12
NZ_CP040231.1\|WP_139658964.1\|1640468_1641839_-\|MATE-family-efflux-transporter	gnl\|CDD\|240543	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	1.37122e-119
NZ_CP040231.1\|WP_000532894.1\|1639655_1640372_-\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	1.05426e-134
NZ_CP040231.1\|WP_001140948.1\|1632610_1632799_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	7.26149e-20
NZ_CP040231.1\|WP_139658967.1\|1646578_1647100_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.35337e-16

>NZ_CP040231.1|WP_042769107.1|1638247_1638709_-|winged-helix-turn-helix-transcriptional-regulator
MDKPMLMFKRFGHQVHLMVQKEAKRCGIEFMGGPQGQVLRFLDHCEQKEELVLIKDIEQELNITKSVASNLVKRMVQNGLVELEASPSDKRAKFVRLTEKSHSQMQKVKEFFDRIDQSLLEGVSKSDLAIFEKVLGQLQANVEKIGGENEETR
>NZ_CP040231.1|WP_139658962.1|1636494_1638264_-|ATP-binding-cassette-domain-containing-protein
MKKLAKRITGKEWGMIVLTILFTCFSVYLELEVPTYISQITELLGTSGTQLGELWSPAAKMIGLSLLAFFSSVMVGFFAARVAASYTTHLRTDVFHRVLDFSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWAVVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDKKFEAANDEVTRLNLFVNRLMAIMNPIMMAISSGLSLAIYWIGAYIINDASLTERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLHSSIENPSHAQTADPSVQGQVEFRDVTFRYSKNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSDGQILVDGVNVQDYNLEDLRNKVGYIPQKAVLFSGNVKGNLDFGKSKESPLSEAAMWQALELAQSKSFIEDKEAGLASEVAQGGTNFSGGQRQRLAIARALARKLEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQGTHKELLATNEVYQEIAYSQLSKEELEHGK
>NZ_CP040231.1|WP_139658961.1|1634744_1636505_-|ATP-binding-cassette-domain-containing-protein
MENKKVSVWKQCKPYMAGLQLPLLIAVVAAVISSIITVYGPTKIKEITNLISDGLATEIDLVAVSNIASFLVILYVFGAILNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLVTMFGMNWILALVTVVSTLVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKARFAGLNQDLHDSIWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLEFLAEAEMQDESHKERQLSDMKGEVVFDHVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGSIRIDGVDTKDMKRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQTGISDERMIEAAKAVGIHHFIMTLPDGYDTILDDTVTLSVGQRQLLTIARALIKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGNHEELMAQGGFYADLYNSQFTEDEAEE
>NZ_CP040231.1|WP_000800936.1|1634143_1634647_-|phosphatase-PAP2-family-protein
MKNYQEWYRNISSRLTSHPTLLFLLRSFNRLMTVAMPLVYLTLLVTTYLQLGLGKQVVVYLLVPATGFVILSLFRKKINHPRPYETWDIRPLLEKDSSGQSMPSRHVFSATIISMACFHAWTLIGMIFLICSGLLALVRVLGGVHYPKDVLVGYACGLMWGLLFFLF
>NZ_CP040231.1|WP_000776591.1|1633583_1634030_-|response-regulator-transcription-factor
MKLRIEIDGNLEETEIVIKTPTLTDEIADLQRLLQESKAPRLTFYKGTGEYYLDLSEILFFETEGSKIYAHNQKEAYEVRLKLYELESILPRYFSRVSKSTIANIRQIYSVDKSFSGTGTISFYQTHKEVHVSRHYQSLLKENLRNMR
>NZ_CP040231.1|WP_000725755.1|1632903_1633578_-|hypothetical-protein
MKKKAFGIVLLVLAAWILLQGNFGIPSLDGKIWPLLGIVFFAYQSVEALLRRHLTSAVFTALVALMIANHFYNIFPIPNQSLFWASILAVLGVGYLTHSSKFWNEKKWWYNGKKTVVTDKEVAFGSGTFYKQDQDLVDDQVEVAFGDAKIYYDNAEMLGDFATLNIEVAFGNATVYVPQHWRVDLKVETSFGAAKADAPVAPTNKTLIIRGEVAFGKLGVVYVK
>NZ_CP040231.1|WP_001140948.1|1632610_1632799_-|50S-ribosomal-protein-L28
MAKVCYFTGRKTVSGNNRSHAMNQTKRAVKPNLQKVTVLIDGKPKKVWASARALKSGKVERV
>NZ_CP040231.1|WP_000216434.1|1632092_1632458_-|Asp23/Gls24-family-envelope-stress-response-protein
MTVKINTKDGQIELTDEVIATVVGGAATEIFGVVGMASKNALKDNFQALLGKENYSKGVVIKAAEDGSIAVDVYTVLSYGVKISEVSKNIQERVRFSLENQLGITAQTVNVYIQNIKVVGE
>NZ_CP040231.1|WP_139658960.1|1630422_1632090_-|DAK2-domain-containing-protein
MSKITTSLFQEMVQAASTRLNKQAEYVNSLNVFPVPDGDTGTNMGMTIENGAKEVADKPASTVGEVASILAKGLLMGARGNSGVITSQLFRGFSQAIKEKDELTGQDLALAFQSGVEVAYKAVMKPVEGTILTVSRGAAIGAKKKAEETDDAVEVMRAALEGAKAALAKTPEMLPVLKEVGVVDSGGQGLVFIYEGFLSALTGEYSASEDFVATPANMSEMINAEHHKSVAGHVATEDITFGYCTEIMVALKQGPTYSKDFDYDEFRNYLNDLGDSLLVVNDDEIVKVHVHTEDPGLVMQEGLKYGSLIKVKVDNMRNQHEAQVEKEASQGNKPAETKEYALIAVVAGQGLADIFRAQGVDYVIEGGQTMNPSTEDFIKAVEQVNARNIIFLPNNKNIFMAAQSAAEVLEQPAVVVEARTIPQGLTSLLAFDPSKSIEENKERMTAALGDVISGSVTTAVRDTTIDGLAIHENDNLGMVDGKILVSNPDMHQTLTETLKHMLDEDSEIVTFYVGEDGSEELANEIAQEIAEEFEDVEVEIHQGQQPVYPYLFSVE
>NZ_CP040231.1|WP_061421420.1|1629860_1630412_-|hypothetical-protein
MKKVLGLVFASLLVLSGCGQTNTATTESSGTASSVDSSTKSSQVKEEIKETTKVLKGKMEEFDVTMTFVYTDVVKQFKMDMLGEFGEEIPAEITPEEFQEVFREAVESSPEYIEIKDEPGVKVEYFITDNKKMRIVIDLDLEKADMDRIKKTYFFESLKDSVEDFKKPNTLIAGLKLQGFREE
>NZ_CP040231.1|WP_139658963.1|1638901_1639606_+|DUF4190-domain-containing-protein
MKGENVQMKPEEQRVLGILATIFGAIALLGSWIPFINYLSFFIAIVAFILGIIGLIVNLKKRKTMAIIGTSLAVASFVLFFTTQVLYANVYKEFVREFNRSYSEASASMEREEESDLTDDSAYSIPEEEEDDTFTWTQKEFDALIEGDLDNKGKGGTNYKDIIKKHGLPDSEFDSTIGGYDTRKITYISIGDKIKTVTLTFAKQDNGQLLLVQKHAVGLGLEKSKKQNDSETRV
>NZ_CP040231.1|WP_000532894.1|1639655_1640372_-|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGDPDPESNTALKFVIDRAKQAQVPKHVIDKAIDKAKGNTDETFTEGRYEGFGPNGSMLIVDTLTSNVNRTAANVRAAFGKNGGNMGASGSVSYLFDNKGVIVFAGEDADAVFEQLLEADVDVDDVEAEEGTITVYTAPTDLHKAIVALRESGIEEFQVTELEMIPQSEVELSGEDLETFEKLYSVLEDDEDVQKIYTNVDGF
>NZ_CP040231.1|WP_139658964.1|1640468_1641839_-|MATE-family-efflux-transporter
MNKKQSVDLIHGPILPSLLSFAFPILLSNIFQQLYNTADVLIVGRFLGQESLAAVGATTAIFDLIIGFTLGVGNGMGIVIARYYGARNFTKIKEAVAATWILGGLLSILVMLMGFVGLYPLLQYLDTPAEILPQSYQYISMIVTCVGVSFAYNLFAGLLRSIGDSLAALGFLIFSALVNVVLDLYFITQLHLGVQSAGLATIISQGLSAVLCFYYIRKSVPELLPQFKHFKWDKSLYADLLEQGLAMGLMSSIVSIGSVILQSSVNTFGAVIISAQTAARRIMAFALLPMTAISSAMTTFASQNLGAKRPDRIVQGLRIGSRLSMSWAGFVCIFLFFASPTLISFLASSTDGYLIENGSLYLQISSVFYPILSLLLIYRNCLQGLGQKILPLVSSFIELIGKIAFVVLIIPWAGYRGVILCEPLIWVAMTTQLYFSLFRHPLIKEGKAILATKGQS
>NZ_CP040231.1|WP_000060284.1|1641948_1642503_+|GNAT-family-N-acetyltransferase
MSLTSQLITDVFPDLDKVEKLNKEAFPEEERVPLSEFLRYQDREDAHFFAFYNQEEFVGFAFAISNPKAFYISFFAIMPHLRSHGYGKEIIEKLTDFYQRTMLLEVERLDEECDNLEQRKARMDFYRQNGFKTANAFLEYDGLSFEILYRGDYFDEEAYRDIFQKLQNEHYFDFHIEYRRFSDH
>NZ_CP040231.1|WP_000415528.1|1642634_1642829_-|PspC-domain-containing-protein
MEKRLVRNVQDKKIAGVCAGIGDYFNMDHTLVRALWIIFTLLGGSGILAYAVLYFLLPEGNAEA
>NZ_CP040231.1|WP_084877348.1|1642998_1644150_-|recombinase-RecA
MAKKPTKKLDEIGKKFGADREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVAALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRGSTQIKGTGDQKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELLKIASDLDIIQKAGAWYSYKGEKIGQGSENAKKYLADHPEIFDAIDHQVRVQYGLIEDEEGTTPTTGAEDLAPNQEVTLDLGDGLEIEIED
>NZ_CP040231.1|WP_139658965.1|1644204_1645461_-|competence/damage-inducible-protein-A
MKAEIIAVGTEILTGQIVNTNAQFLSEKLAEIGVDVYFQTAVGDNEARLLSLLEIASQRSNLVILTGGLGPTEDDLTKQTLAKFLGKNLVFDPQAQEKLDIFFAHRPDYARTPNNERQAQIVEGATPLPNETGLAVGGVSEVDGVTYVVLPGPPSELKPMVLNQLLPKLMTGTKLYSRVLRFFGIGESQLVTILADLIDHQTDPTLAPYAKTGEVTLRLSTKAVSQEKADQALDILENQILSRQTFEGISLRDICYGYGEETSLASVVVEELKKRQKSITAAESLTAGLFQATLADFSGVSAIFNGGFVTYSLEEKSKMLDISEQELKEYGVVSEFTARKMAEQARIKTQSDYGVSLTGVAGPDSLEGHPAGTVFIGLAHAKGTEVIKANIAGRSRADVRHIAVMHAFNLVRKALLSD
>NZ_CP040231.1|WP_139658966.1|1645533_1646574_-|LytR-family-transcriptional-regulator
MIKKLIGMVLGFLAVTVVGVAVYGYTIYQQGTETLSKKTYKKIGEETNVIEATEPLTILLMGVDTGNVERTDPWAGNSDSMILLTVNPKTKKTTMMSLERDILTKIETGNGQVQEAKLNAAYANGGAELAISTIQKMMNIHIDRYVMVNMQGLQQLVDAVGGITVNNTLGFPISIADQEEFNKISIGVGEQTLNGEEALVYSRMRYQDPEGDYGRQKRQREVIQKIVEKVLSLNSVSHYQGILKALSDNMQTNVDLSAKSIPQLLGYQDSFKNIETHQLRGEDAELQGISYQIVTSEHMLEMQNLLRRSLGKEPVTELETNAVLYETAFGRTAPSTSTNTSNEEAE
>NZ_CP040231.1|WP_139658967.1|1646578_1647100_-|GNAT-family-N-acetyltransferase
MEYELCIREAEISDATALIAFLDCVGQETDFTSLDENGIMMTASEMALFIEKQATSENQITLLALLNDEIAGVLNITADQHLRVRHIGDVFLAVRKKFWNQGLATILLEEGIEWAKSSGVLRRLQLSVQKRNEAAIHLYSKMGFITEGLQERGAYLAEGIFLDVCLMGKLINE
>NZ_CP040231.1|WP_139658968.1|1647089_1647533_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MHTKNEEELLALGERLGHLLQKDDVLILTGELGVGKTTFTKGLAKGLGIRQMIKSPTYTIVREYEGRLPLYHLDVYRIEGDADSIDLDEFLFGGGVTVIEWGYLLGEDLPDSYLELEILKEAEGRCLHFTAHGSRAEQLIKELQDGV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

34528 : 46241

Cyanophage(33.33%)

bacteriocin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_125414668.1\|34528_36682_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	8.8e-44	28.0
WP_139658204.1\|36694_38044_+\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_139658205.1\|38212_38920_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SE76	Cyanophage	2.1e-42	40.1
WP_076984906.1\|38921_39065_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	NA	NA	NA
WP_139658206.1\|39132_42858_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	8.7e-39	26.4
WP_139658207.1\|43013_44456_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.8e-54	34.9
WP_049506272.1\|44670_45693_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	4.0e-63	43.1
WP_049490119.1\|45689_46241_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	8.9e-25	35.2

DBSCAN-SWA_2

280371 : 285328

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139658331.1\|280371_281058_+	helix-turn-helix domain-containing protein	A0A1S5SAF1	Streptococcus_phage	1.4e-56	50.4
WP_139658332.1\|281061_282477_+	Y-family DNA polymerase	M1Q231	Streptococcus_phage	1.4e-194	70.5
WP_125422848.1\|282473_282836_+	hypothetical protein	Q6DMX5	Streptococcus_phage	2.0e-25	49.2
WP_139658333.1\|282828_283137_+	hypothetical protein	M1PG86	Streptococcus_phage	1.6e-20	57.3
WP_070697442.1\|283159_283636_-	glutathione peroxidase	Q70H87	Fowlpox_virus	4.4e-20	34.2
WP_139658334.1\|283632_284211_-	DUF3278 domain-containing protein	NA	NA	NA	NA
WP_139658335.1\|284223_284565_-	hypothetical protein	NA	NA	NA	NA
WP_139658336.1\|284575_285118_-	DUF3278 domain-containing protein	NA	NA	NA	NA
WP_001082470.1\|285133_285328_-	helix-turn-helix transcriptional regulator	A0A142LP09	Marinitoga_camini_virus	5.5e-06	37.1

DBSCAN-SWA_3

506698 : 516049

Streptococcus_phage(42.86%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139659094.1\|506698_507664_+	glycosyltransferase	V5USA4	Oenococcus_phage	4.0e-73	47.9
WP_081021170.1\|507739_508009_-	ferredoxin	NA	NA	NA	NA
WP_049549902.1\|507988_508495_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_000849413.1\|508504_509179_+	(d)CMP kinase	NA	NA	NA	NA
WP_139658410.1\|509297_509804_+	dihydrofolate reductase	G3MBI7	Bacillus_virus	6.2e-25	41.2
WP_000442252.1\|509803_509974_+	hypothetical protein	NA	NA	NA	NA
WP_139658411.1\|510005_511238_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.8e-132	59.2
WP_000405203.1\|511246_511834_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_061427825.1\|511843_512224_+	RidA family protein	NA	NA	NA	NA
WP_000163039.1\|512275_513166_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.8e-06	30.6
WP_139658412.1\|513162_514140_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	1.5e-171	92.0
WP_139658413.1\|514136_515048_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	2.0e-146	90.4
WP_139658414.1\|515080_516049_-	FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	3.2e-62	93.5

DBSCAN-SWA_4

622903 : 630151

Streptococcus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139658466.1\|622903_623398_+	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	8.5e-43	53.4
WP_139658467.1\|623394_623910_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	9.8e-42	50.0
WP_139658468.1\|623922_624279_+	Spx/MgsR family RNA polymerase-binding regulatory protein	M1PLC0	Streptococcus_phage	2.6e-33	57.3
WP_000219166.1\|624435_625236_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_125397927.1\|625235_625979_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.0e-28	39.6
WP_000924293.1\|626056_626281_+	DUF4059 family protein	NA	NA	NA	NA
WP_139658469.1\|626346_627258_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	3.8e-89	50.8
WP_000855740.1\|627293_628022_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_042767740.1\|628066_628678_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.2e-16	43.2
WP_139658470.1\|628831_630151_+	CapA family protein	A0A0N9SJ77	Staphylococcus_phage	8.9e-31	28.0

DBSCAN-SWA_5

685588 : 694009

Streptococcus_phage(77.78%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049479174.1\|685588_686497_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	8.1e-07	27.7
WP_000745683.1\|686493_686961_+	signal peptidase II	NA	NA	NA	NA
WP_000403230.1\|686944_687844_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	1.5e-08	27.0
WP_002874455.1\|687924_689055_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.5e-116	59.5
WP_139658513.1\|689064_690327_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	3.5e-141	65.7
WP_076984474.1\|690330_691128_+	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	1.5e-60	52.5
WP_076984475.1\|691248_691887_+	dTMP kinase	M1PSC7	Streptococcus_phage	4.0e-77	68.1
WP_076984476.1\|691883_692774_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	5.2e-75	52.4
WP_000358229.1\|692810_693128_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.8e-28	60.0
WP_001166866.1\|693130_694009_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.3e-115	75.4

DBSCAN-SWA_6

884642 : 961113

Streptococcus_phage(87.04%)

capsid,holin,protease,head,tRNA,terminase,portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139658609.1\|884642_886016_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_001117401.1\|886150_886333_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_125391051.1\|886456_887047_+	thymidine kinase	A0A249XZX5	Enterococcus_phage	5.2e-47	54.6
WP_125391052.1\|887043_888123_+	peptide chain release factor 1	NA	NA	NA	NA
WP_125391053.1\|888122_888959_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_125391054.1\|888942_889545_+	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	5.2e-18	33.2
WP_125391055.1\|889546_889978_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_125391056.1\|890036_891293_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	3.9e-100	53.6
WP_125391057.1\|891267_892275_+	nucleoid-associated protein	NA	NA	NA	NA
WP_125391058.1\|892274_892877_+	lysozyme family protein	A0A1B1PAK0	Bacillus_phage	3.9e-26	40.4
WP_125391059.1\|892963_893938_+	DUF1002 domain-containing protein	NA	NA	NA	NA
WP_139658610.1\|894011_895367_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A1X9I6F4	Streptococcus_phage	8.8e-191	72.2
WP_000873143.1\|895881_896052_+	hypothetical protein	A0A1X9I6E4	Streptococcus_phage	3.7e-22	98.2
WP_000417519.1\|896437_897655_+	macrolide efflux MFS transporter Mef(A)	A0A2K5B2B5	Erysipelothrix_phage	5.1e-198	90.6
WP_000420313.1\|897774_899238_+	ABC-F type ribosomal protection protein Msr(D)	A0A1B0RXA0	Streptococcus_phage	3.7e-251	97.3
WP_001072467.1\|899355_899655_-	hypothetical protein	A0A1B0RX98	Streptococcus_phage	1.8e-48	96.0
WP_000567222.1\|899641_900010_-	hypothetical protein	A0A1B0RXA8	Streptococcus_phage	1.1e-58	97.5
WP_000806926.1\|900022_900358_-	hypothetical protein	NA	NA	NA	NA
WP_139658611.1\|900354_901770_-	Y-family DNA polymerase	M1Q231	Streptococcus_phage	1.1e-268	97.9
WP_049494972.1\|901892_902120_-	hypothetical protein	M1NSM5	Streptococcus_phage	2.3e-35	96.0
WP_049494974.1\|902122_902812_-	helix-turn-helix domain-containing protein	M1PG82	Streptococcus_phage	1.3e-110	86.0
WP_139659101.1\|902974_904441_+	DNA (cytosine-5-)-methyltransferase	G9E546	Ostreococcus_lucimarinus_virus	2.8e-86	44.1
WP_125840180.1\|904474_905140_-	NgoBV family restriction endonuclease	NA	NA	NA	NA
WP_139658612.1\|905164_905851_-	hypothetical protein	NA	NA	NA	NA
WP_125841162.1\|905962_907831_+	ImmA/IrrE family metallo-endopeptidase	E4ZFJ9	Streptococcus_phage	4.9e-293	78.3
WP_125841163.1\|908237_908843_+	hypothetical protein	Q6DMW6	Streptococcus_phage	3.0e-10	27.8
WP_125841164.1\|908882_910838_-	DNA polymerase	A0A1B0RXB4	Streptococcus_phage	0.0e+00	91.7
WP_046391433.1\|911072_911621_-	DUF2815 family protein	E4ZFK3	Streptococcus_phage	1.6e-98	99.5
WP_139658613.1\|911625_912747_-	DUF2800 domain-containing protein	A0A1B0RXB8	Streptococcus_phage	2.0e-212	96.2
WP_125841166.1\|912739_913063_-	hypothetical protein	M1PSP3	Streptococcus_phage	2.6e-45	90.4
WP_139658614.1\|913481_915767_+	DNA primase	A0A1X9I6B6	Streptococcus_phage	0.0e+00	92.0
WP_006153521.1\|916045_916327_+	VRR-NUC domain-containing protein	M1PFY8	Streptococcus_phage	1.2e-33	74.7
WP_139658615.1\|916307_917675_+	DEAD/DEAH box helicase	A0A1X9I6B0	Streptococcus_phage	4.3e-222	82.6
WP_139658616.1\|917676_918159_+	hypothetical protein	M1PSN8	Streptococcus_phage	7.3e-23	38.0
WP_139658617.1\|918344_918572_+	hypothetical protein	A0A1X9I6K4	Streptococcus_phage	7.3e-26	70.7
WP_139658618.1\|918628_918823_+	hypothetical protein	A0A1X9I6B9	Streptococcus_phage	9.7e-11	53.6
WP_139658619.1\|918873_919911_+	methionine adenosyltransferase	Q6DMV3	Streptococcus_phage	2.6e-158	80.0
WP_139658620.1\|919912_920278_+	HNH endonuclease	A0A1B0RXJ3	Streptococcus_phage	1.6e-59	84.3
WP_139658621.1\|920541_920973_+	helix-turn-helix domain-containing protein	A0A1B0RXC6	Streptococcus_phage	5.6e-51	62.7
WP_139658622.1\|920974_922231_+	DNA modification methylase	E4ZFL4	Streptococcus_phage	7.3e-216	87.6
WP_139658623.1\|922227_923409_+	DNA (cytosine-5-)-methyltransferase	A0A1X9I6A7	Streptococcus_phage	5.1e-203	82.8
WP_139658624.1\|923460_923673_+	DUF4314 domain-containing protein	A0A1B0RXD4	Streptococcus_phage	1.5e-17	62.3
WP_139658625.1\|923675_923906_+	hypothetical protein	E4ZFL8	Streptococcus_phage	3.1e-16	51.3
WP_139658626.1\|923950_924424_+\|terminase	phage terminase small subunit P27 family	A0A1B0RXI5	Streptococcus_phage	6.1e-83	93.6
WP_139658627.1\|924420_926013_+\|terminase	terminase large subunit	A0A1B0RXJ8	Streptococcus_phage	4.2e-293	90.2
WP_045615998.1\|926078_926372_+	antitoxin	NA	NA	NA	NA
WP_006153450.1\|926364_926703_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_139658628.1\|926772_928059_+\|portal	phage portal protein	A0A1B0RXD8	Streptococcus_phage	1.2e-229	90.6
WP_061421029.1\|928051_928750_+\|protease	Clp protease ClpP	M1PLE5	Streptococcus_phage	2.5e-104	81.5
WP_125841180.1\|928768_929974_+\|capsid	phage major capsid protein	E4ZFM5	Streptococcus_phage	1.3e-214	93.3
WP_006153583.1\|929976_930234_+\|head,tail	phage gp6-like head-tail connector protein	A0A1X9I695	Streptococcus_phage	1.4e-28	74.1
WP_061421027.1\|930233_930587_+\|head,tail	head-tail adaptor protein	D0R0D8	Streptococcus_phage	2.9e-37	67.0
WP_045616005.1\|930564_930933_+	HK97 gp10 family phage protein	A0A1X9I688	Streptococcus_phage	9.1e-34	58.2
WP_139658629.1\|930940_931267_+	hypothetical protein	M1Q1Z4	Streptococcus_phage	4.1e-38	68.5
WP_045616007.1\|931269_931839_+\|tail	phage tail protein	A0A1B0RXE2	Streptococcus_phage	4.2e-94	90.5
WP_139658630.1\|931850_932270_+	hypothetical protein	E4ZFN0	Streptococcus_phage	2.2e-55	78.1
WP_139658631.1\|932452_935506_+\|tail	phage tail tape measure protein	Q6DMT2	Streptococcus_phage	5.6e-262	75.0
WP_049501427.1\|935502_936225_+\|tail	phage tail protein	A0A1S5S925	Streptococcus_phage	5.3e-94	67.1
WP_139659102.1\|938568_940572_+\|tail	tail fiber domain-containing protein	C5J973	Streptococcus_phage	8.9e-115	72.9
WP_001090723.1\|940525_940732_+	hypothetical protein	A0A0A0YQQ5	Streptococcus_phage	3.0e-10	58.1
WP_001162702.1\|940731_940983_+	hypothetical protein	A0A1S5SE83	Streptococcus_phage	4.5e-08	40.0
WP_045616014.1\|940995_941424_+\|holin	holin	A0A1S5SD95	Streptococcus_phage	9.6e-51	74.5
WP_139658632.1\|941413_942358_+	N-acetylmuramoyl-L-alanine amidase family protein	A0A1S5SCY4	Streptococcus_phage	6.1e-98	82.4
WP_139658633.1\|942984_944226_+	recombinase family protein	A0A1X9I6J1	Streptococcus_phage	2.3e-169	69.7
WP_139659103.1\|944164_945475_+	recombinase family protein	E4ZFN9	Streptococcus_phage	2.0e-192	76.3
WP_139658634.1\|945571_946171_+	hypothetical protein	NA	NA	NA	NA
WP_139658635.1\|947165_947405_+	hypothetical protein	NA	NA	NA	NA
WP_139658636.1\|947406_947982_+	DUF416 family protein	NA	NA	NA	NA
WP_139658637.1\|948174_948543_+	hypothetical protein	NA	NA	NA	NA
WP_139658638.1\|948758_949394_+	hypothetical protein	NA	NA	NA	NA
WP_139658639.1\|949653_950094_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_139659104.1\|950366_950687_+	hypothetical protein	NA	NA	NA	NA
WP_139659105.1\|951116_951491_+	hypothetical protein	NA	NA	NA	NA
WP_139658640.1\|951483_952155_+	hypothetical protein	NA	NA	NA	NA
WP_139658641.1\|952445_952832_+	hypothetical protein	NA	NA	NA	NA
WP_049518643.1\|953796_954519_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_049518645.1\|954527_955280_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_125391062.1\|955428_956859_+	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	1.4e-26	25.8
WP_001020606.1\|956871_957174_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_049518650.1\|957184_958498_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_049518651.1\|958511_958832_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_080978783.1\|958986_959523_+	sugar phosphorylase	NA	NA	NA	NA
WP_038806089.1\|960369_961113_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_7

1039489 : 1046668

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139658683.1\|1039489_1041208_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	6.8e-273	83.7
WP_139658684.1\|1041319_1041667_+	thioredoxin	NA	NA	NA	NA
WP_084943882.1\|1041704_1042478_-	ion transporter	A0A1B0Y2S3	Lactobacillus_phage	1.1e-28	49.1
WP_084943449.1\|1042572_1043382_-	MBL fold metallo-hydrolase	A0A2H4J3R0	uncultured_Caudovirales_phage	9.0e-34	37.8
WP_139658685.1\|1043374_1044733_-	cell wall metabolism sensor histidine kinase VicK	W8CYF6	Bacillus_phage	1.2e-33	34.0
WP_139658686.1\|1044725_1045433_-	response regulator	W8CYM9	Bacillus_phage	4.0e-38	38.3
WP_139658687.1\|1045489_1046668_-	A/G-specific adenine glycosylase	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	1.8e-22	30.7

DBSCAN-SWA_8

1827502 : 1845645

Streptococcus_phage(42.86%)

integrase

attL 1818870:1818885|attR 1852568:1852583

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1818870:1818885	attL	NA	NA	NA	NA
WP_139659050.1\|1827502_1828276_-	NUDIX domain-containing protein	G3MA14	Bacillus_virus	8.4e-21	31.1
WP_139659051.1\|1828277_1829057_-	nicotinamide riboside transporter PnuC	U5J9C5	Bacillus_phage	8.1e-24	31.4
WP_139659052.1\|1829066_1830125_-	AAA family ATPase	A0A291I9M1	Lactobacillus_phage	3.0e-69	45.7
WP_139659053.1\|1830270_1832703_-	AAA domain-containing protein	A0A223W0B1	Agrobacterium_phage	4.7e-126	40.4
WP_001211258.1\|1832704_1833163_-	hypothetical protein	NA	NA	NA	NA
WP_125391513.1\|1833491_1833812_-	hypothetical protein	NA	NA	NA	NA
WP_125391512.1\|1833801_1834263_-	DUF4065 domain-containing protein	D0UIM3	Aggregatibacter_phage	4.7e-11	34.6
WP_139659118.1\|1834404_1834623_-	hypothetical protein	NA	NA	NA	NA
WP_139659054.1\|1834770_1835061_-	hypothetical protein	NA	NA	NA	NA
WP_033630508.1\|1835110_1835323_-	hypothetical protein	M1Q1E3	Streptococcus_phage	5.2e-26	77.1
WP_139659119.1\|1835591_1835933_-	HNH endonuclease	Q7Y4J1	Streptococcus_phage	2.6e-59	95.5
WP_139659055.1\|1836114_1836762_-	hypothetical protein	NA	NA	NA	NA
WP_125391509.1\|1837281_1838736_-	virulence-associated protein E	Q9AZE5	Lactococcus_phage	1.3e-54	31.7
WP_125391508.1\|1838728_1839244_-	hypothetical protein	NA	NA	NA	NA
WP_125391507.1\|1839240_1839504_-	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	9.4e-17	54.4
WP_125391506.1\|1839505_1839715_-	hypothetical protein	NA	NA	NA	NA
WP_084930585.1\|1839716_1839920_-	hypothetical protein	NA	NA	NA	NA
WP_139659056.1\|1840280_1840709_-	hypothetical protein	NA	NA	NA	NA
WP_125391504.1\|1840828_1841083_-	hypothetical protein	NA	NA	NA	NA
WP_000909283.1\|1841337_1841523_-	hypothetical protein	A0A1X9I5U7	Streptococcus_phage	1.4e-06	53.2
WP_139659057.1\|1841678_1842263_+	helix-turn-helix domain-containing protein	A0A1X9I723	Streptococcus_phage	3.8e-10	52.8
WP_004261908.1\|1842297_1842567_+	DUF4177 domain-containing protein	NA	NA	NA	NA
WP_049510243.1\|1842827_1843292_+	hypothetical protein	Q4ZCB9	Staphylococcus_virus	8.8e-18	32.4
WP_049510244.1\|1843284_1844073_+	DUF1828 domain-containing protein	Q6SEA4	Lactobacillus_prophage	1.6e-30	34.8
WP_139659058.1\|1844478_1845645_+\|integrase	tyrosine-type recombinase/integrase	A0A1X9I5Y5	Streptococcus_phage	1.6e-111	53.6
1852568:1852583	attR	NA	NA	NA	NA

DBSCAN-SWA_9

1875181 : 1883933

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_084944240.1\|1875181_1876021_-	energy-coupling factor transporter ATPase	A0A2K9L3Z8	Tupanvirus	7.4e-15	31.8
WP_139659077.1\|1876005_1876833_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	1.1e-21	34.5
WP_139659078.1\|1876829_1877375_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_139659079.1\|1877385_1878216_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_125391774.1\|1878242_1879526_-	insulinase family protein	A0A167R9K4	Powai_lake_megavirus	1.3e-15	30.5
WP_139659080.1\|1879522_1880773_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	1.2e-88	40.4
WP_139659081.1\|1880933_1881302_+	S4 domain-containing protein YaaA	A0A1X9I5V8	Streptococcus_phage	1.4e-18	60.0
WP_139659082.1\|1881304_1882396_+	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_071851777.1\|1882454_1883933_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	4.9e-94	40.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP040231

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection