CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP032913	Helicobacter pylori strain 5-A-EK1 chromosome, complete genome	2 crisprs	cas3,cas14j,cas2	0	3	2	0

1. NZ_CP032913

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP032913_1

• CRISPR_ID: NZ_CP032913_1
• CRISPR_location: 274300-274373
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP032913_1

Consensus_repeat	Method
ACACCGCTTCAAGCGACACACCA	CRISPRCasFinder

spacers of NZ_CP032913_1

>1.1|274323|28|NZ_CP032913|CRISPRCasFinder
ACCCCACCAACTAAAGAGGAATCAAAAC

CRISPR arrays and Neighbor proteins around NZ_CP032913_1

CRISPR arrays

The CRISPR arrays of NZ_CP032913_1

>merge|NZ_CP032913|1|274300-274373|CRISPRCasFinder
ACACCGCTTCAAGCGACACACCAACCCCACCAACTAAAGAGGAATCAAAACACACCGCTTCAAGCGGCACACCA

>NZ_CP032913|1|1|274300-274373|CRISPRCasFinder
ACACCGCTTCAAGCGACACACCA	ACCCCACCAACTAAAGAGGAATCAAAAC
ACACCGCTTCAAGCGGCACACCA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032913.1|WP_139523949.1|265249_266014_-|urease-accessory-protein-UreF	unknown	unknown	gnl|CDD|223900
NZ_CP032913.1|WP_001178801.1|281233_281422_-|DUF5408-family-protein	unknown	unknown	gnl|CDD|340117
NZ_CP032913.1|WP_000583068.1|266025_266538_-|urease-accessory-protein-UreE	unknown	unknown	gnl|CDD|237322
NZ_CP032913.1|WP_033762781.1|272378_273437_+|peptide-chain-release-factor-1	unknown	unknown	gnl|CDD|234801
NZ_CP032913.1|WP_139523954.1|282834_284208_-|hypothetical-protein	unknown	unknown	gnl|CDD|366353
NZ_CP032913.1|WP_139523956.1|286468_287164_-|aminodeoxyfutalosine-nucleosidase	unknown	unknown	gnl|CDD|180148
NZ_CP032913.1|WP_000755207.1|273826_274084_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP032913.1|WP_139523957.1|287174_288104_-|ACP-S-malonyltransferase	unknown	unknown	gnl|CDD|272922
NZ_CP032913.1|WP_000167671.1|280521_280947_-|50S-ribosomal-protein-L13	unknown	unknown	gnl|CDD|181703
NZ_CP032913.1|WP_139523950.1|270558_271896_-|phosphoglucosamine-mutase	unknown	unknown	gnl|CDD|184621
NZ_CP032913.1|WP_139523952.1|275796_277569_+|dentin-sialophosphopreproprotein	unknown	unknown	gnl|CDD|237555
NZ_CP032913.1|WP_000901259.1|266539_267127_-|acid-activated-urea-channel	unknown	unknown	gnl|CDD|259831
NZ_CP032913.1|WP_001273627.1|271985_272255_+|30S-ribosomal-protein-S20	unknown	unknown	gnl|CDD|178943
NZ_CP032913.1|WP_000779223.1|269029_269746_-|urease-subunit-alpha	unknown	unknown	gnl|CDD|184439
NZ_CP032913.1|WP_139523955.1|284228_286271_-|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl|CDD|235549
NZ_CP032913.1|WP_000724276.1|267316_269026_-|urease-subunit-beta	unknown	unknown	gnl|CDD|184438
NZ_CP032913.1|WP_001227274.1|280135_280525_-|30S-ribosomal-protein-S9	unknown	unknown	gnl|CDD|178888
NZ_CP032913.1|WP_000935491.1|270091_270565_-|lipoprotein-signal-peptidase	unknown	unknown	gnl|CDD|234739
NZ_CP032913.1|WP_000061414.1|281428_282781_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|240393
NZ_CP032913.1|WP_139523953.1|277973_279995_-|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl|CDD|214599

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP032913.1|WP_139523949.1|265249_266014_-|urease-accessory-protein-UreF	gnl|CDD|223900	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones].	5.4641e-93
NZ_CP032913.1|WP_001178801.1|281233_281422_-|DUF5408-family-protein	gnl|CDD|340117	pfam17402, DUF5408, Family of unknown function (DUF5408). This is a family of unknown function found in Helicobacteraceae. Family members are predicted to contain one trans-membrane region.	6.12244e-07
NZ_CP032913.1|WP_000583068.1|266025_266538_-|urease-accessory-protein-UreE	gnl|CDD|237322	PRK13261, ureE, urease accessory protein UreE; Provisional.	5.9629e-47
NZ_CP032913.1|WP_033762781.1|272378_273437_+|peptide-chain-release-factor-1	gnl|CDD|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NZ_CP032913.1|WP_139523954.1|282834_284208_-|hypothetical-protein	gnl|CDD|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	7.15694e-18
NZ_CP032913.1|WP_139523956.1|286468_287164_-|aminodeoxyfutalosine-nucleosidase	gnl|CDD|180148	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase.	6.80075e-116
NZ_CP032913.1|WP_139523957.1|287174_288104_-|ACP-S-malonyltransferase	gnl|CDD|272922	TIGR00128, Malonyl_CoA-acyl_carrier_protein_transacylase, malonyl CoA-acyl carrier protein transacylase. This enzyme of fatty acid biosynthesis transfers the malonyl moeity from coenzyme A to acyl-carrier protein. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension. [Fatty acid and phospholipid metabolism, Biosynthesis].	3.07535e-149
NZ_CP032913.1|WP_000167671.1|280521_280947_-|50S-ribosomal-protein-L13	gnl|CDD|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.82283e-78
NZ_CP032913.1|WP_139523950.1|270558_271896_-|phosphoglucosamine-mutase	gnl|CDD|184621	PRK14324, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_CP032913.1|WP_139523952.1|275796_277569_+|dentin-sialophosphopreproprotein	gnl|CDD|237555	PRK13914, PRK13914, invasion associated endopeptidase.	8.87213e-05
NZ_CP032913.1|WP_000901259.1|266539_267127_-|acid-activated-urea-channel	gnl|CDD|259831	cd13404, UreI_AmiS_like, UreI/AmiS family, proton-gated urea channel and putative amide transporters. This family includes UreI proton-gated urea channels as well as putative amide transporters (AmiS of the amidase gene cluster). Helicobacter pylori UreI (HpUreI), a proton-gated inner membrane urea channel opens in acidic pH to allow urea influx to the cytoplasm. There urea is metabolized, producing NH3 and CO2, leading to buffering of the periplasm. This action is essential for the survival of H. pylori in the stomach, and has been identified as a mechanism that could be clinically targeted to prevent various illnesses associated with infection by H. pylori. UreI and the related amide channels (AmiS) appear to function as hexamers, and have 6 predicted transmembrane segments. UreI has also been shown have a lipid "plug" in the center of the hexamer. Urea enters at the periplasmic opening of UreI and must pass 2 constriction sites, one on each side of a conserved Glu (Glu 177, H. pylori numbering), to reach the cytoplasm. Urea/thiourea selectivity is diminished by mutation of a conserved Trp to Ala or Phe in constriction site 2 (cytoplasmic). Channel functionality is greatly diminished by mutation of a conserved Trp in constriction site 1 (periplasmic) and a conserved Tyr in constriction site 2, and to a lesser extent a conserved Phe in site 1. In the cytoplasm, urease hydrolyzes urea to form ammonia and carbamate, which decomposes to carbonic acid. UreI is fully open at pH 5.0 to facilitate urea influx, but closes at neutral pH, preventing over-alkalization. Glu 177 (H. pylori numbering) is present in urea channel proteins, but absent in the related amide channels, suggesting that it plays a role in urea specificity.	3.09503e-74
NZ_CP032913.1|WP_001273627.1|271985_272255_+|30S-ribosomal-protein-S20	gnl|CDD|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	9.45572e-24
NZ_CP032913.1|WP_000779223.1|269029_269746_-|urease-subunit-alpha	gnl|CDD|184439	PRK13986, PRK13986, urease subunit beta.	9.94747e-143
NZ_CP032913.1|WP_139523955.1|284228_286271_-|RNA-polymerase-sigma-factor-RpoD	gnl|CDD|235549	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.	0
NZ_CP032913.1|WP_000724276.1|267316_269026_-|urease-subunit-beta	gnl|CDD|184438	PRK13985, ureB, urease subunit alpha.	0
NZ_CP032913.1|WP_001227274.1|280135_280525_-|30S-ribosomal-protein-S9	gnl|CDD|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.60979e-67
NZ_CP032913.1|WP_000935491.1|270091_270565_-|lipoprotein-signal-peptidase	gnl|CDD|234739	PRK00376, lspA, lipoprotein signal peptidase.	3.20501e-42
NZ_CP032913.1|WP_000061414.1|281428_282781_-|FAD-dependent-oxidoreductase	gnl|CDD|240393	PTZ00383, PTZ00383, malate:quinone oxidoreductase; Provisional.	2.10628e-173
NZ_CP032913.1|WP_139523953.1|277973_279995_-|methyl-accepting-chemotaxis-protein	gnl|CDD|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	1.03221e-35

Protein sequences

>NZ_CP032913.1|WP_000755207.1|273826_274084_+|hypothetical-protein
MKKVFLGMALAFSVSMAEKSGAFLGGGFQYSNLENQNTTRTPGANNNTPIDTSMFGSNQTAPAQETQSASKPDTKVNPSASWMKK
>NZ_CP032913.1|WP_033762781.1|272378_273437_+|peptide-chain-release-factor-1
MSILAEKLSSILKRYDELTALLSSTEVISDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQFE
>NZ_CP032913.1|WP_001273627.1|271985_272255_+|30S-ribosomal-protein-S20
MANHKSAEKRIRQTIKRTERNRFYKTKVKNIIKAVREAVAINDVAKAQERLKIANKELHKFVSKGILKKNTASRKVSRLNASVKKIALA
>NZ_CP032913.1|WP_139523950.1|270558_271896_-|phosphoglucosamine-mutase
MKIFGTDGVRGKAGVKLTPMFVMRLGVAAGLYFKKHSKTNKILIGKDTRKSGYMVENALVSALTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNPFEDNGIKFFNSYGYKLKEEEEKAIEEIFHDEELLHSSYKVGEGIGNAKRIDDVIGRYIVHLKHSFPKHLNLQNLRIVLDTANGAAYKVAPVVFSELGADVLVINDEPNGCNINEQCGALHPNQLSQEVKKYRADLGFAFDGDADRLVVVDNLGNIVHGDKLLGVLGVYQKSKNALSSQAIVATNMSNLALKEYLKSQDLELKHCAIGDKFVSECMRLNKANFGGEQSGHIIFSDYAKTGDGLVCALQVSALVLESKQVSSVALNPFELYPQSLVNLNVQKKPPLESLKSYSALLKELDKLEIRHLIRYSGTENKLRILLEAKDEKLLESKMQELKEFFEGHLC
>NZ_CP032913.1|WP_000935491.1|270091_270565_-|lipoprotein-signal-peptidase
MLNTTQQSLLVFIGVFFLIFGVDQAIKYAILEGFRYESLVIDIVLVFNKGVAFSLLSFLEGGLKYLQILLILGLFIFLMRQKELFKSHAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYGFDFAIFNFADVMIDVGVGVLLLKQFFFKQKQNKIKA
>NZ_CP032913.1|WP_000779223.1|269029_269746_-|urease-subunit-alpha
MKLTPKELDKLMLHYAGELAKKRKEKGIKLNYVEAVALISAHIMEEARAGKKTAAELMQEGRTLLKPDDVMDGVASMIHEVGIEAMFPDGTKLVTVHTPIEANGKLVPGELFLKNEDITINEGKKAVSVKVKNVGDRPVQIGSHFHFFEVNRCLDFDREKTFGKRLDIASGTAVRFEPGEEKSVELIDIGGNRRIFGFNALVDRQADNESKKIALHRAKERGFHGAKSDDNYVKTIKE
>NZ_CP032913.1|WP_000724276.1|267316_269026_-|urease-subunit-beta
MKKISRKEYASMYGPTTGDKVRLGDTDLIAEVEHDYTIYGEELKFGGGKTLREGMSQSNNPSKEELDLIITNALIVDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQQIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKFMLRAAEEYSMNFGFLAKGNVSNDASLADQIEAGAIGFKIHEDWGTTPSAINHALDVADKYDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGEVITRTWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFGVKPNMIIKGGFIALSQMGDANASIPTPQPVYYREMFAHHGKAKYDANITFVSQAAYDKGIKEELGLERQVLPVKNCRNITKKDMQFNDTTAHIEVNPETYHVFVDGKEVTSKPANKVSLAQLFSIF
>NZ_CP032913.1|WP_000901259.1|266539_267127_-|acid-activated-urea-channel
MLGLVLLYVGIVLISNGICGLTKVDPKSTAVMNFFVGGLSIICNVVVITYSALNPTAPVEGAEDIAQVSHHLTSFYGPATGLLFGFTYLYAAINHTFGLDWRPYSWYSLFVAINTVPAAILSHYSDMLDDHKVLGITEGDWWAIIWLAWGVLWLTAFIENILKIPLGKFTPWLAIIEGILTAWIPAWLLFIQHWV
>NZ_CP032913.1|WP_000583068.1|266025_266538_-|urease-accessory-protein-UreE
MIIERLMGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKDRLTVSMPHSEPNFKVSLASDFKVVMK
>NZ_CP032913.1|WP_139523949.1|265249_266014_-|urease-accessory-protein-UreF
MDKGKSVKSTEKSVGMPPKTPKTDNNAHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVSNKESALKYLKANLSSQFLYTEMLSLKLTYESTLQQDLKKILGVEEIIRLSTSPMELRLANQKLGNRFIKTLQAMNELDMGAFFNAYAQKTKDPTHATSYGVFAASLNIELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDIKAMQHESLYSRLYMS
>NZ_CP032913.1|WP_139523952.1|275796_277569_+|dentin-sialophosphopreproprotein
MKAIKILFIMTLSLNAISVNRALFDLKDSQLKGELTPKIVNFGGYKSSTTEWGATALNYINAANGDAKKFSALVEKMRFNSGILGNFRAHARLRQALKLQKNLKYCLKIIARDSFYSYRTGIYIPLGISLKDQKTAQKMLADLSVVGAYLKKQQENEKAQNPYYRSNNYYNSYYSPYYGMYGMYGMGMYGMGMYDFYDFYDGMYGFYPNMFFMMQVQDYLMLENYMYALDQEEILDHDASINQLDTPTDDDRDDKDDKSLQQANLMSFYRDPKFSKGIQTNRLNSALVNLDNSRMLKDNSLFHTKAMPTKSVDAITSQAKELNHLVGQIKEMKQDGASPSKIDSVVNKAMEVRDKLDNNLNQLDNDLKDQKGLSSEQQAQVDKALDSVQQLSHSSDVVGNYLDGSLKIDGDDRDDLNDAMNNPMQQPAQQTPTSNMANTHANDSKDQGGNALINPNSTTNTDDTHTDDTHTDTNTTNDASATDTPTDDKDASGNNTGDMNNTDTGNTDTGNTDTGNTDDMSNMNNGNDDAGNANDDMSNGNDMGDDMNNANDMNDDMGNSNDDMGDMGDMNDDMGGDMGDMGDMGGDMGN
>NZ_CP032913.1|WP_139523953.1|277973_279995_-|methyl-accepting-chemotaxis-protein
MKSTRIGSKIVMMVCAVVIVISAVMGVIISYKVESVLQSQATELLQKKAQLVSFKIQGIMKRIFIGANTLEKFLSDENSAINDTLKKRMLSEFLLANPHVLLISAIYTNNNERAITAMSMDSKIAYPNTTLNENMTNQIHSLKSITRSDPYYKEVNGDKIYGMDITLPLMGKNQNVIGALNFFLNIDAFYTDVVGKKKSNTFLMGKDGRLLINPNREIQDKILSAINPDRRVAKAVEYYNQNEAGTLSYHSLSGNTETFLAIQPFDFFEEKGNNGNRWRWAIGKYVNKSLVFKEATNTKFIIITTLILGVLVLAFLVFIIVSNLITKRISRVNNTLNDFFNLLNNPKNNHAISLTPPSAYDEIGQMQASINENILKTQESIQADNKAIQNSIEVANFVESGDFTQEIACVPKNKDLQALRNTINSIIQYFRNQIGANIEALNNALEHYKNLDFTHHIQNPKANMEKALNTLGQEISSMLKASLGFANALNHESKDLKTCVDNLTKTAHKQERSLKNTTQSLEEITNIITTIDSKSQEMISQGEDIKSVVDMIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQKSLSEIEANINILVQSIADNAESIKMQNKGVENIHNSINALQQDVQDNLTIANHSLQVSAKIDGISQDILEDVSKKKF
>NZ_CP032913.1|WP_001227274.1|280135_280525_-|30S-ribosomal-protein-S9
MRKIYATGKRKTAIAKVWLTPGKGGLSINEQSLNQWLGGHEAIKMKVMQPLLLTKQEQSVDIKAVVFGGGYSAQAEALRHGISKALNAYDIAFRAILKPKGLLTRDSRVVERKKYGKRKARRSPQFSKR
>NZ_CP032913.1|WP_000167671.1|280521_280947_-|50S-ribosomal-protein-L13
MTKTAKVNDIVRDWVVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYFTHSGYFGSTKSKTLQEMLEKAPEKLYHLAVRGMLPKTKLGKAMIKKLKVYRDDKHPHTAQTSKKDAK
>NZ_CP032913.1|WP_001178801.1|281233_281422_-|DUF5408-family-protein
MQNEQEAREIAKKAVQIVFFLGIVVVLLMMINLYMLINQINASAQMSQQIKKIEERLNQERK
>NZ_CP032913.1|WP_000061414.1|281428_282781_-|FAD-dependent-oxidoreductase
MSMEFDAVIIGGGVSGCATFYTLSEYSSLKRVAIVEKCSKLAQISSSAKANSQTIHDGSIETNYTPEKAKKVRLSAYKTRQYALNKGLQNEVIFETQKMAIGVGDEECEFMKKRYESFKEIFVGLEEFDKQKIKELEPNVILGANGIDRHENIIGHGYQKDWSTMNFAKLSENFVEEALKLKPNNQVFLNFKVKKIEKRNDTYAVISEDAEEVYAKFVLVNAGSYALPLAQSMGYGLDLGCLPVAGSFYFVPDLLRGKVYTVQNPKLPFAAVHGDPDAVIKGKTRIGPTALTMPKLERNKCWLKGISLELLKMDLNKDVFKIAFDLMSDKEIRNYVFKNMVFELPIIGKRKFLKDAQKIIPSLSLEDLEYAHGFGEVRPQVLDRTKRKLELGEKKICTHKGITFNMTPSPGATSCLQNALVDSQEIAAYLGESFELERFYKDLSPEELEN
>NZ_CP032913.1|WP_139523954.1|282834_284208_-|hypothetical-protein
MRYFLVVFLFLFVGCTKKDFTLKDLSLPQEASSYLASSQNGSNNNQSIDPQALRENLKESYLKAWYSPWLDMKVKSNKKEVFWILKEMNKSTGYGEDLKPNAKAFNDELIKSMDIERYPSAKIRAVVVRDSDVRAVPTNKPFYLSPKGYPFDRYQNSLIFQGTPVLVTHFNTDKTYAHIQSSFVYGWIKVSDLAYMRDKDIELLTHLKNYVMPIKDKIPLYTDYGDFYTNARVGELFALIPQSQKTPQKPQKKKLKAYGFLRDAKGYAILQSVILEEKDFFVFPKAFNSENMAYFIDTMLGQKYGWGGLLGNRDCSAFTRDSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEYYILKNATPFGTLIYLKGHIMLYLGAHNHQAIVAHSIWSVQTQKHFKTLSHKIGGVVITSLWLAEEHNGAFSKKKLLIDRVLGISDLKDFVNKTSSPLNAN
>NZ_CP032913.1|WP_139523955.1|284228_286271_-|RNA-polymerase-sigma-factor-RpoD
MKKKANEEKAPKRAKQEAKAEATQEVAQENKAKENNKAKESKIKENKTKESKIKEAKAKEPIPVKKLSFNEALEELFANSLSDCVSYESIIQISAKVPTLAQIKKIKELCQKYQKKLVSSSEYAKKLNAIDKIKKTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELSKQIRLGEDIILDAICSVPYLIDFIYAYKDALINRERRVKELFRSFDDDDENSVSDSKKDDDSEEDEENEERKKVVSEKDKKRVEKVQESFKALDKAKKEWLKALEAPIDEKEDELVRLLTLAYKRQTLKDRLYDLEPTSKLINELVKTMETTLKSGDGFEKELKRLEYKLPLFNDTLIANHKKILANITNMTKEDIIAQVPEATMVSVYMDLKKLFLTKEASEEGFDLAPNKLKEILEQIKRGKLISDRAKNKMAKSNLRLVVSIAKRFTSRGLPFLDLIQEGNIGLMKAVDKFEHEKGFKFSTYATWWIKQAISRAIADQARTIRIPIHMIDTINRINKVMRKHIQENGKEPDLEVVAEEVGLSLDKVKNVIKVTKEPISLETPVGNDDDGKFGDFVEDKNIVSSIDHIMREDLKAQIESVLDQLNEREKAVIRMRFGLLDDESDRTLEEIGKELNVTRERVRQIESSAIKKLRSPQYGRILRNYLRI
>NZ_CP032913.1|WP_139523956.1|286468_287164_-|aminodeoxyfutalosine-nucleosidase
MVQKIGILGAMREEITPILELFGADFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVANQLVQHDVDLSAFDHPLGFIPESAIFIETSESLNALAKKVANEQHIALKEGVIASGDQFVHSKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEEANMSFDAFLEKSAQTSAKFLKSMVDKL
>NZ_CP032913.1|WP_139523957.1|287174_288104_-|ACP-S-malonyltransferase
MQYALLFPGQGSQCIGMGKSFYESHTLAKELFERASNALKVDMKKTLFEENELLKESTYTQPAIYLVSYIAYQLLNKQVNGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACTNKDASMMVVLGVSEESLLSLCQRTKNVWCANFNGGMQVVLAGIKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMTFKFQELLEKSLKDKFHFEIISNAINEAYHNKAKAVELLSLQLTQPVRYQDCVKSNNDRVGVFFELGCGSVLKGLNKRLSNKPTISVGDNKGLDEAIEFLEEYV

Crispr_ID: NZ_CP032913_2

• CRISPR_ID: NZ_CP032913_2
• CRISPR_location: 1101567-1101764
• CRISPR_type: Orphan
• Repeat_type: I-B
• Spacer_info: 3 spacers

Consensus repeat of NZ_CP032913_2

Consensus_repeat	Method
TTCAATCAAGGCACTTATAATTTTAAT	CRISPRCasFinder

spacers of NZ_CP032913_2

>2.1|1101594|33|NZ_CP032913|CRISPRCasFinder
AACAGCACAAGTTCAAGCTTTGGTAATAGTAAC
>2.2|1101654|30|NZ_CP032913|CRISPRCasFinder
AGTGCCCAATCCACTTTTGAAAACAGCAAT
>2.3|1101711|27|NZ_CP032913|CRISPRCasFinder
GACAATACTAGCTTTAATAACGACACC

CRISPR arrays and Neighbor proteins around NZ_CP032913_2

CRISPR arrays

The CRISPR arrays of NZ_CP032913_2

>merge|NZ_CP032913|2|1101567-1101764|CRISPRCasFinder
TTCAATCAAGGGACTTATCATTTTAGTAACAGCACAAGTTCAAGCTTTGGTAATAGTAACTTCAATCAAGGGACTTATCACTTTAATAGTGCCCAATCCACTTTTGAAAACAGCAATTTCAATCAAGGCACTTATAATTTTAATGACAATACTAGCTTTAATAACGACACCTTCAATCAAGGCACTTATAATTTTAAT

>NZ_CP032913|2|2|1101567-1101764|CRISPRCasFinder
TTCAATCAAGGGACTTATCATTTTAGT	AACAGCACAAGTTCAAGCTTTGGTAATAGTAAC
TTCAATCAAGGGACTTATCACTTTAAT	AGTGCCCAATCCACTTTTGAAAACAGCAAT
TTCAATCAAGGCACTTATAATTTTAAT	GACAATACTAGCTTTAATAACGACACC
TTCAATCAAGGCACTTATAATTTTAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032913.1|WP_139524933.1|1082636_1083770_+|N-6-DNA-methylase	unknown	unknown	gnl|CDD|223897
NZ_CP032913.1|WP_139524521.1|1090671_1092216_-|outer-membrane-beta-barrel-protein-HofG	unknown	unknown	gnl|CDD|334957
NZ_CP032913.1|WP_139524519.1|1088286_1089879_+|Hop-family-adhesin-AlpB	unknown	unknown	gnl|CDD|280099
NZ_CP032913.1|WP_001240271.1|1098871_1099564_-|Bax-inhibitor-1/YccA-family-protein	unknown	unknown	gnl|CDD|198414
NZ_CP032913.1|WP_139524515.1|1083778_1085806_+|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl|CDD|223288
NZ_CP032913.1|WP_139524536.1|1110501_1111647_+|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl|CDD|272903
NZ_CP032913.1|WP_000591722.1|1114832_1115492_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP032913.1|WP_139524527.1|1095515_1098773_-|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl|CDD|235393
NZ_CP032913.1|WP_139524535.1|1109923_1110505_+|recombination-protein-RecR	unknown	unknown	gnl|CDD|273176
NZ_CP032913.1|WP_139524543.1|1115495_1116098_+|6-pyruvoyl-tetrahydropterin-synthase-family-protein	unknown	unknown	gnl|CDD|223792
NZ_CP032913.1|WP_139524533.1|1108415_1109519_+|Hop-family-outer-membrane-protein-HopJ/HopK	unknown	unknown	gnl|CDD|280099
NZ_CP032913.1|WP_139524525.1|1095079_1095511_-|Sua5/YciO/YrdC/YwlC-family-protein	unknown	unknown	gnl|CDD|376519
NZ_CP032913.1|WP_001115881.1|1109569_1109776_-|4-oxalocrotonate-tautomerase-family-protein	unknown	unknown	gnl|CDD|129125
NZ_CP032913.1|WP_120838369.1|1114032_1114836_+|5'/3'-nucleotidase-SurE	unknown	unknown	gnl|CDD|234732
NZ_CP032913.1|WP_139524529.1|1099708_1100707_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|273675
NZ_CP032913.1|WP_139524517.1|1086708_1088265_+|Hop-family-adhesin-AlpA	unknown	unknown	gnl|CDD|280099
NZ_CP032913.1|WP_139524538.1|1111585_1112566_+|zinc-metalloprotease-HtpX	unknown	unknown	gnl|CDD|235081
NZ_CP032913.1|WP_139524542.1|1113124_1114036_+|polyprenyl-synthetase-family-protein	unknown	unknown	gnl|CDD|223220
NZ_CP032913.1|WP_139524523.1|1092461_1094903_-|TonB-dependent-receptor	unknown	unknown	gnl|CDD|273808
NZ_CP032913.1|WP_139524540.1|1112566_1113109_+|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl|CDD|129173

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP032913.1|WP_139524933.1|1082636_1083770_+|N-6-DNA-methylase	gnl|CDD|223897	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair].	5.47114e-51
NZ_CP032913.1|WP_139524521.1|1090671_1092216_-|outer-membrane-beta-barrel-protein-HofG	gnl|CDD|334957	pfam02521, HP_OMP_2, Putative outer membrane protein. This family consists of putative outer membrane proteins from Helicobacter pylori (campylobacter pylori).	2.46936e-179
NZ_CP032913.1|WP_139524519.1|1088286_1089879_+|Hop-family-adhesin-AlpB	gnl|CDD|280099	pfam01856, HP_OMP, Helicobacter outer membrane protein. This family seems confined to Helicobacter. It is predicted to be an outer membrane protein based on its pattern of alternating hydrophobic amino acids similar to porins.	1.05636e-53
NZ_CP032913.1|WP_001240271.1|1098871_1099564_-|Bax-inhibitor-1/YccA-family-protein	gnl|CDD|198414	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins. This family is comprised of bacterial relatives of the mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. In plants, BI-1 like proteins play a role in pathogen resistance. A characterized prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.	3.29259e-52
NZ_CP032913.1|WP_139524515.1|1083778_1085806_+|UvrD-helicase-domain-containing-protein	gnl|CDD|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	2.02683e-135
NZ_CP032913.1|WP_139524536.1|1110501_1111647_+|tRNA-pseudouridine(13)-synthase-TruD	gnl|CDD|272903	TIGR00094, tRNA_pseudouridine_synthase_D, tRNA pseudouridine synthase, TruD family. an EGAD loading error caused one member to be called surE, but that's an adjacent gene. MJ11364 is a strong partial match from 50 to 230 aa. [Protein synthesis, tRNA and rRNA base modification].	1.12656e-143
NZ_CP032913.1|WP_139524527.1|1095515_1098773_-|carbamoyl-phosphate-synthase-large-subunit	gnl|CDD|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP032913.1|WP_139524535.1|1109923_1110505_+|recombination-protein-RecR	gnl|CDD|273176	TIGR00615, Recombination_protein_RecR, recombination protein RecR. All proteins in this family for which functions are known are involved in the initiation of recombination and recombinational repair. RecF is also required. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	1.47527e-97
NZ_CP032913.1|WP_139524543.1|1115495_1116098_+|6-pyruvoyl-tetrahydropterin-synthase-family-protein	gnl|CDD|223792	COG0720, COG0720, 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism].	3.07172e-21
NZ_CP032913.1|WP_139524533.1|1108415_1109519_+|Hop-family-outer-membrane-protein-HopJ/HopK	gnl|CDD|280099	pfam01856, HP_OMP, Helicobacter outer membrane protein. This family seems confined to Helicobacter. It is predicted to be an outer membrane protein based on its pattern of alternating hydrophobic amino acids similar to porins.	3.21191e-48
NZ_CP032913.1|WP_139524525.1|1095079_1095511_-|Sua5/YciO/YrdC/YwlC-family-protein	gnl|CDD|376519	pfam01300, Sua5_yciO_yrdC, Telomere recombination. This domain has been shown to bind preferentially to dsRNA. The domain is found in SUA5 as well as HypF and YrdC. It has also been shown to be required for telomere recombniation in yeast.	6.08604e-05
NZ_CP032913.1|WP_001115881.1|1109569_1109776_-|4-oxalocrotonate-tautomerase-family-protein	gnl|CDD|129125	TIGR00013, Probable_tautomerase_K2, 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function. [Energy metabolism, Other].	2.46126e-26
NZ_CP032913.1|WP_120838369.1|1114032_1114836_+|5'/3'-nucleotidase-SurE	gnl|CDD|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	2.00446e-125
NZ_CP032913.1|WP_139524529.1|1099708_1100707_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl|CDD|273675	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I. This model represents glyceraldehyde-3-phosphate dehydrogenase (GAPDH), the enzyme responsible for the interconversion of 1,3-diphosphoglycerate and glyceraldehyde-3-phosphate, a central step in glycolysis and gluconeogenesis. Forms exist which utilize NAD (EC 1.2.1.12), NADP (EC 1.2.1.13) or either (1.2.1.59). In some species, NAD- and NADP- utilizing forms exist, generally being responsible for reactions in the anabolic and catabolic directions respectively. Two Pfam models cover the two functional domains of this protein; pfam00044 represents the N-terminal NAD(P)-binding domain and pfam02800 represents the C-terminal catalytic domain. An additional form of gap gene is found in gamma proteobacteria and is responsible for the conversion of erythrose-4-phosphate (E4P) to 4-phospho-erythronate in the biosynthesis of pyridoxine. This pathway of pyridoxine biosynthesis appears to be limited, however, to a relatively small number of bacterial species although it is prevalent among the gamma-proteobacteria. This enzyme is described by TIGR001532. These sequences generally score between trusted and noise to this GAPDH model due to the close evolutionary relationship. There exists the possiblity that some forms of GAPDH may be bifunctional and act on E4P in species which make pyridoxine and via hydroxythreonine and lack a separate E4PDH enzyme (for instance, the GAPDH from Bacillus stearothermophilus has been shown to posess a limited E4PD activity as well as a robust GAPDH activity). There are a great number of sequences in the databases which score between trusted and noise to this model, nearly all of them due to fragmentary sequences. It seems that study of this gene has been carried out in many species utilizing PCR probes which exclude the extreme ends of the consenses used to define this model. The noise level is set relative not to E4PD, but the next closest outliers, the class II GAPDH's (found in archaea, TIGR01546) and aspartate semialdehyde dehydrogenase (ASADH, TIGR01296) both of which have highest-scoring hits around -225 to the prior model. [Energy metabolism, Glycolysis/gluconeogenesis].	1.52549e-159
NZ_CP032913.1|WP_139524517.1|1086708_1088265_+|Hop-family-adhesin-AlpA	gnl|CDD|280099	pfam01856, HP_OMP, Helicobacter outer membrane protein. This family seems confined to Helicobacter. It is predicted to be an outer membrane protein based on its pattern of alternating hydrophobic amino acids similar to porins.	3.12588e-54
NZ_CP032913.1|WP_139524538.1|1111585_1112566_+|zinc-metalloprotease-HtpX	gnl|CDD|235081	PRK02870, PRK02870, heat shock protein HtpX; Provisional.	0
NZ_CP032913.1|WP_139524542.1|1113124_1114036_+|polyprenyl-synthetase-family-protein	gnl|CDD|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	6.06584e-76
NZ_CP032913.1|WP_139524523.1|1092461_1094903_-|TonB-dependent-receptor	gnl|CDD|273808	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	9.68694e-47
NZ_CP032913.1|WP_139524540.1|1112566_1113109_+|GTP-cyclohydrolase-I-FolE	gnl|CDD|129173	TIGR00063, GTP_cyclohydrolase_1, GTP cyclohydrolase I. alternate names: Punch (Drosophila),GTP cyclohydrolase I (EC 3.5.4.16) catalyzes the biosynthesis of formic acid and dihydroneopterin triphosphate from GTP. This reaction is the first step in the biosynthesis of tetrahydrofolate in prokaryotes, of tetrahydrobiopterin in vertebrates, and of pteridine-containing pigments in insects. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid].	1.25615e-106

Protein sequences

>NZ_CP032913.1|WP_139524529.1|1099708_1100707_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MKIFINGFGRIGRCVLRAILERNDTNPQLEVIGINDPANWEILAYLLEHDSVHGLLFKEVRYSNYKLIIGSLEIPVFNSIKDLKGVDVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFIGEYDEKQYPTLVYGVNHFCYQNQAIVSNASCTTNAIAPICAILDKAFNIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKAFKDPINDLLMEASKGALKGVLEIDLKERVSSDFISNPSSVIIAPDLTFTLENMVKIMGWYDNEWGYSNRLVDMAQFVYHY
>NZ_CP032913.1|WP_001240271.1|1098871_1099564_-|Bax-inhibitor-1/YccA-family-protein
MALYDRANSRNAYAEDSLLHESELVGFVKTTYKFFAGSLLLATIGALLGLMNFQAVVQYKWVFFIAEIAAFFGLMFSKSKPGLNLFMLFAFTSLSGVTLVPLLGMVIAKAGLGAIWQALGMTTIVFGLMSVYALKTKNDLANMGKMLFIALIVVVVCSLINLFLGSPMFQVVIAGASAILFSLYIAYDTQNIVKGMYDSPIDAAVSLYLDFLNVFISILQIIGIFSDRDK
>NZ_CP032913.1|WP_139524527.1|1095515_1098773_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDISNILLIGSGPIVIGQACEFDYSGTQSCKTLKSLGYRVILINSNPATVMTDPEFSHKTYIQPITGENIAAIIEKEKIDAILPTMGGQTALNAVMQMHQKGMLEGVELLGAKIEAIKKGEDRQAFKEAMLKIGMDLPKGRYAYNELEALEAINEIGFPAIIRASFTLAGGGSGVAYNIEEFQELAKNALDASPINEILIEESLLGWKEYEMEVIRDSKDNCIIVCCIENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDASFAILREIGVDTGGSNVQFAIHPETLRMVVIEMNPRVSRSSALASKATGFPIAKVATMLAVGFSLDEIQNDITNTPASFEPSLDYIVVKIPRFAFEKFAGVSSTLGTSMKSIGEVMAIGGNFLEALQKALCSLENNWLGFESLSKDLEIIKKEIRRPNPKRLLYIADAFRLGVCVDEVFELCQIDRWFLSQIQKLVKAEEGINSSVLTDAKKLRGLKNLGFSDARIAAKIKENENLEVSPFEVELARSNLQIAPNFEEVDTCAAEFLSLTPYLYSTYAPNPLPPIENKQEKQEKKILIIGSGPNRIGQGIEFDYCCVHASFALKDLNIKSVMLNCNPETVSTDYDTSDTLYFEPIHFECVKSIIQRERVDGIIVHFGGQTPLKLAKDLAKMQAPIIGTPFKVIDIAEDREKFSLFLKELDIKQPKNGMAKSIDEAYSIANVIGFPIIVRPSYVLGGQHMQILENIEELHHYLESVTHALEISPKNPLLIDKFLEKAVELDVDVICDKQEVYIAGILQHIEEAGIHSGDSACFIPSNLNPEILDEIERVSAKIALHLGVVGLLNIQFAVYENSLYLIEVNPRASRTVPFLSKALGVPLAKVATRVMVLEDLKEALKFYDKKNIVGYSKGVYKPKMPHFVALKEAVFPFNKLYGSDLILGPEMKSTGEVMGIARSLGLAFFKAQTACFNPIKNKGLIFVSIKDKDKEEACVLMKRLVQLGFELCATEGTHKALEKAGVKSLKVLKISEGRPNIMDLMMNGEISMAINTSDHKSQDDAKLIRASVLKNHVSYFTTLSAIEVLILALEESSKEDELLALQDYLK
>NZ_CP032913.1|WP_139524525.1|1095079_1095511_-|Sua5/YciO/YrdC/YwlC-family-protein
MALVYLAQSDTTIGLLSKDSERLNALKNRPKNQSVLIESADFTTLKSLVRAPNAFKNLIRRSLKTTFIYPNSKAVRVVRGRHGDFLKRFKTLYSTSANLTQCAYDKEIASNLADVIVSDERGLFESSSSKIFRLYKNKKVRVR
>NZ_CP032913.1|WP_139524523.1|1092461_1094903_-|TonB-dependent-receptor
MNDKRFRKYWSFSIFLSLLGMFELEAKEEEKEERKTERKKDKKKNAQHTLGKVTTQAAKIFNYNNQTTISSKELERRQANQISDMFRRNPNINVGGGAVIAQKIYVRGIEDRLARVTVDGAAQMGASYGHQGNTIIDPGMLKSVVVTKGAAQASAGPMALIGAIKMETKSASDFIPKGKDYAISGAATFLTNFGDRETVMGAYRNHYFDALLYYTHQNIFYYRDGDNAMKNLFDPKAENKVTASPSEQNNVMAKINGYLSERDILTLSYNMTRDNANRPLRANFTGTFLPYSCGDFNAFPNEKNPDDCLFENDASLFKTYSVNLVHNVSLNYEREGGSRFGDPKLKINGYTSIRNVQIDPLFKPSDIAAIIPFTPNPKLGEENQCVAQGGIYDAVKQTCSITFKSLGGGSVVANKNLFIINSGFNANVIHTIDHKNDNLLEYGLNYQNLTTFDKAIPNSELVKPGDAPDACLRVTSPNDPNMNGRCQRNGATANVVGVYAQANYTLHPMVTLGAGTRYDVYTLVDKDWQLHITQGFSPSAALNVSPLENLNFRLSYAYVTRGPMPGGLVWMRQDNLRYNRNLKPEIGQNVEFNTEYSSQYFDFRAAGFVQLISNYINQFSSTLFVTNLPAQDIIYVPGYEVSGTAKYKGFSLGLSVARSWPSLKGRLIADVYELAATTGNVFILTASYTIPRTGLSITWLSRFVTDLSYCSYSPYRNGPTDIDRRPSDCPKTPGIFHVHKPGYGVSSFFITYKPTYKKLKGLSLNAVFNNVFNQQYIDQASPVMSPDEPNQDKYARGMAEPGFNARFEISYKF
>NZ_CP032913.1|WP_139524521.1|1090671_1092216_-|outer-membrane-beta-barrel-protein-HofG
MRQEKYFLTSSLSLLSFLLCPAEAFDYRFSGRVENFSKIGFNNSQINTKKGIYPTESFIDIVTLAQVKVNLLPKGTENHRLSVSLGGAIAAIPYDKTKYDINQANGKIFGSIVENFIGGYHGYFFNKYLGPAYAGTSQSASYHARPYVVDTAFLRYDYKDVFGFKAGRYEANIDFMSGSNQGWEVYYQPYKTETQRLRFWWWSSFGRGLAFNSWIYEFFATVPYLKKGGNPNNSNDFINYGWHGITTTYSYKGLDAQFFYYFAPKTYNAPGFKLVYDTNRNFENVGFRSQSMIMTTFPLYYRGWYNPETNTYSLEDSTPHGSLLGRNGVTLNIRQVFWWDNFNWSIGFYNTFGNSDAFLGSHTMPRGNNTSYIGSEISITTRHAGMIGYDFWDNTAYDGLADAITNANTFTFYTSVGGIHKRFAWHVFGRVSHANKNALGQVGRANEYSLQFNASYAFTESVLLNFRITYYGARINKGYQAGYFGVPKFNNPDGDFSANYQDRSYMMTNLTLKF
>NZ_CP032913.1|WP_139524519.1|1088286_1089879_+|Hop-family-adhesin-AlpB
MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNPVGAEEDGGFMTFGYELGQVVQQVKNPGKIKAEELAGLLNSNTTNNTNINIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLNTSSINQCGATNSGSSGSGTTAAATTSSSPCFQGNLALYREMVSSIKTLSQNISKNIFQGDNNTTSQNLSNQLSELNTASVYLTYMNSFLNANNQAGGIFQNNTNQAYGNGVTAQQIAYILKQASITMGPSGDSGAAAAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVNNSQNALTLANNANISNSTGYQVSYGGNIDQARSTQLLNNTTNTLAKVTALNNELKANPWLGNFAAGNSSQVNAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTYNQVNLLTYGVGTDVLYNVFSRSFGSRSLNAGFFGGIQLAGDTYISTLRNSPQLASRPTATKFQFLFDLGLRMNFGILKKDLKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF
>NZ_CP032913.1|WP_139524517.1|1086708_1088265_+|Hop-family-adhesin-AlpA
MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGAKSDELARELNADVTNNILNNNTGGNVAGALSNAFSQYLYSLLGAYPTKLNSNDVSANALLSGAVGSGTCAAAGTAGGTSLNTQSACTAAGYYWLPSLTDRILSTIGSQTNYGTNTNFPNMQQQLTYLNAGNVFFNTMNKALENKNGTSGTSGTNGATGSDGQTYSQQAIQYLQGQQTILNNAANLLKQDELLLEAFNSAVAANIGNKEFNSAAFTGLVQGIIDQSQAVYNELTKNTISGSAVYSAGINSNQSNAVQGRASQLPNALYNTQVTLDKINALNNQVRSMPYLPQFRAGNSRATNILNGFYTKIGYKQFFGKKRNIGLRYYGFFSYNGASVGFRSTQNNVGLYTYGVGTDVLYNIFSRSYQNRSVDMGFFSGIQLAGETFQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQHTVEFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF
>NZ_CP032913.1|WP_139524515.1|1083778_1085806_+|UvrD-helicase-domain-containing-protein
MLETLQLNPEQLKAACALQGYNLVIASAGTGKTSTIVGRILHLLDNGIKPEEILLLTFTNKASNEMIARVAKYFKSSSKIEAGTFHAVAYRYLKERYPNLSLKQPKELRKLLESIVDTKNAIDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSHKNPEHMPYAALYENILEEFENTKKKHNYIDYNDLLLLFKKAMLETPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYDQSIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEVVKSGKFNKPTLLNYNDNIAQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVPSKRKGSASFFESKEVALALDICALIFNPKDIMAAIHILSYISDIGSNTAKDIHEALMLLGNGDLKLALTHPNKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPKISLNGAKTLSDFFILYTKAPTHSPSALIKHILESAFFQTFKTRLLKERSKNKDGSYNEFKKLQVQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGCGVNLLSVHASKGLEFKDVYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHKPSVFLYEAGLLKPDSK
>NZ_CP032913.1|WP_139524933.1|1082636_1083770_+|N-6-DNA-methylase
MNNLDIKTLGQVFTPKNIVDFMLTLKHNQGSVLEPSAGDGSFLKRLKKAVGIEIDPKICPKNALCMDFFDYSLENQFDTIIGNPPYVKHKDIAPSAKEKLHYSLFDERSNLYLFFIEKAIRHLKPKGELIFITPRDFLKSTSSVKLNEWIYQEGTITHFFELGDQKIFPNAMPNCVIFRFCKGNFSRITNDGLQFLCKKGILYFLNQSYTQKLNEVFKVKMGAVSGCDKIFKNEKYGNLEFVTSITKRTNVLEKMVFVNEPNDYLLQHKDSLMQRKIKKFNENNWFEWGRMHHISPKKRIYVNTKTRQKNPFFIHQCPNYDGSILALFPYNQNLDLQNLCDKLNAINWQELGFVCDGRFLFSQRSLENALLPKDFLN
>NZ_CP032913.1|WP_139524533.1|1108415_1109519_+|Hop-family-outer-membrane-protein-HopJ/HopK
MQKALLRSSFFLSLLLSCCIAEENGAYASVGFEYSISHAVEHNNPFLNQERIQIISNAQNKIYKLNQVENEIKGMPNTFNYINNALKNNAKLTPTEMQAEQYYLQSTLQNIEKIVTLSGGVASNPQLAQALEKIQEPITNPLELVENLKNLELQFNQSQNRMLSSLSSQIAAISNSLNALDPNSYSKNISSMYGVSLSVGYKHFFTKKKNQGFRYYLFYDYGYTNFGFVGNGFDGLGKMNNHLYGLGIDYLFNFIDNAKKHSSVGFYVGFALAGSSWVGSGLGMWVSQRDFINNYLINYQAKMHTSFFQIPLNFGVRVNVNRHNGFEMGLKIPLAVNSFYETHGKGLNTSLFFKRLVAFNVSYVYSF
>NZ_CP032913.1|WP_001115881.1|1109569_1109776_-|4-oxalocrotonate-tautomerase-family-protein
MPFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESVHHLRQKN
>NZ_CP032913.1|WP_139524535.1|1109923_1110505_+|recombination-protein-RecR
MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCSSCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLSNDSLMLYIEDKLQRFHLTFTKIAQGVPTGVNFENIDSVSLSRAFNSRIKA
>NZ_CP032913.1|WP_139524536.1|1110501_1111647_+|tRNA-pseudouridine(13)-synthase-TruD
MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEMLQIFSQILGVRIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQERNLKILSLNYHHNKIKLGHLKGNRFFMRFKKMTPLNAQKTKQVLEQIAQFGMPNYFGSQRFGKFNDNHQEGLKILQNQTKFAHQKLNAFLISSYQSYLFNALLSKRLEISKIISAFSLKENLEFFKQKNLSVDSNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEAVPTGLLDGKKALYAKNLSLEIEKEFQHNLLSSHAKTLGSRRFFWVFAENVTSQYVKEKAQFELGFYLPKGSYASALLKEIKHEKGENNDEF
>NZ_CP032913.1|WP_139524538.1|1111585_1112566_+|zinc-metalloprotease-HtpX
MRARCSKKSSMRKEKIMTNFEKIIAQNRLKTNAVLTTYCAIFAFIGLLVDAIRINANDLGVALFKLITFQIFPTITIIMFLVAFVIIVVCIQNFSSIMLSGDEYKLIDPSKVLSSKENQIHRLLLELLEEAKLHFEPKLYIINAPYMNAFASGWDESNSLIALTSALIERLDKDELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLVANFSVYFFMGNRKNSGANLARMILWALQIILPFLTLILQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYANNDYKGIDQNSTRSAAYLFNAEMFSTHPSIKNRIQSLRKRVI
>NZ_CP032913.1|WP_139524540.1|1112566_1113109_+|GTP-cyclohydrolase-I-FolE
MENFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPRVALKSAYFQGVCDEMIVAQNIEFYSTCEHHLLPFFGNISVGYIPKEKIVGISTIAKLIEIYSRRLQIQERLTTQIAETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNAIIKTSVLRGLFKKDPKTRAEFMQLLKS
>NZ_CP032913.1|WP_139524542.1|1113124_1114036_+|polyprenyl-synthetase-family-protein
MNNPNLSFYYNECERFESFLNHHHLHLESFHPYLERAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNALLESHIIVELIKILSVNGGIKGMILGQALDCYFENTPLNLEQITFLHEHKTAKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLDSAKNSFVNLLGLKKANDYAQTLKTEVLNDLNLLKLAYPLLQENLNALLNTLFKGKT
>NZ_CP032913.1|WP_120838369.1|1114032_1114836_+|5'/3'-nucleotidase-SurE
MKKILLTNDDGYHAKGIKALEQALEGMAEIYVVAPKHEKSACSQCITITAPLRAEKIKGKEGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPFSFDLAQKIIQDLVQNIFTKGYPLKGRKLLNVNVPNCSLQEYKGERITPKGYRLYKKEVHKRTDPKNESYFWLGLHPLEWQKRENEDRLSDFDAIASNHASITPLNLDLTSYDDLKSLESWHEGMLK
>NZ_CP032913.1|WP_000591722.1|1114832_1115492_+|hypothetical-protein
MIKKHRLAFLGLIVGVFFFFNACQHRLHMGYYSEVTGDYLFNYNSTIVVAYDRSDAMTSYYINVIVYELQKLGFYNVFTQAEFPLDKAKNVIYARIVRNISAVPFYQYNYQLIDQVNKPCYFLGGQFYCSQTPTDYYAINGFSEQILMSANSHFILDWYDVVLQKRVLYVDGSVSGRTCGYQMLYRDLIKSTIKRIDFNRPERYYYNLRLPLYQPCYRQ
>NZ_CP032913.1|WP_139524543.1|1115495_1116098_+|6-pyruvoyl-tetrahydropterin-synthase-family-protein
MVIRRLYKFCASHVVRNCSSLKCAQNIHGHNYEVEVFIETNRLDNANMALDFGLMQQEMQVFIESFDHAHHFWDKESVEFQRFIENHCVRYVKCSFNLSAESYALMFLYYLSRILQKSVFSNNEGELKVSSVRVHETKNGYAESFLNDLENPHFKSLVHPNCVSFSQGIQNLWHDKDFFNKIISDEKQCFFHAKPSHQIP

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP032913_1	1.1|274323|28|NZ_CP032913|CRISPRCasFinder	274323-274350	28	NC_013792	Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequence	193497-193524	5	0.821
NZ_CP032913_1	1.1|274323|28|NZ_CP032913|CRISPRCasFinder	274323-274350	28	MG592531	Vibrio phage 1.164.O._10N.261.51.A7, partial genome	37126-37153	5	0.821
NZ_CP032913_2	2.3|1101711|27|NZ_CP032913|CRISPRCasFinder	1101711-1101737	27	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	1090168-1090194	5	0.815
NZ_CP032913_1	1.1|274323|28|NZ_CP032913|CRISPRCasFinder	274323-274350	28	MG945621	UNVERIFIED: Microviridae sp. isolate 5722-1702, complete genome	2067-2094	6	0.786
NZ_CP032913_2	2.2|1101654|30|NZ_CP032913|CRISPRCasFinder	1101654-1101683	30	MK448589	Streptococcus satellite phage Javan632, complete genome	4593-4622	6	0.8
NZ_CP032913_2	2.2|1101654|30|NZ_CP032913|CRISPRCasFinder	1101654-1101683	30	NZ_CP022523	Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence	752261-752290	9	0.7

1. spacer 1.1|274323|28|NZ_CP032913|CRISPRCasFinder matches to NC_013792 (Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequence) position: , mismatch: 5, identity: 0.821

accccaccaactaaagaggaatcaaaac	CRISPR spacer
accccaccaacaaaagaggaagctcaaa	Protospacer
*********** ********* *  ** 

2. spacer 1.1|274323|28|NZ_CP032913|CRISPRCasFinder matches to MG592531 (Vibrio phage 1.164.O._10N.261.51.A7, partial genome) position: , mismatch: 5, identity: 0.821

accccaccaactaaagaggaatcaaaac	CRISPR spacer
aacgcaacaactaaacaggaatcaaaat	Protospacer
* * ** ******** ***********.

3. spacer 2.3|1101711|27|NZ_CP032913|CRISPRCasFinder matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 5, identity: 0.815

gacaatactagctttaataacgacacc	CRISPR spacer
aagaatattagctttagtaacgacacg	Protospacer
.* ****.********.********* 

4. spacer 1.1|274323|28|NZ_CP032913|CRISPRCasFinder matches to MG945621 (UNVERIFIED: Microviridae sp. isolate 5722-1702, complete genome) position: , mismatch: 6, identity: 0.786

accccaccaactaaagaggaatcaaaac	CRISPR spacer
ccctcaccaactgaagaggaatcaatct	Protospacer
 **.********.************  .

5. spacer 2.2|1101654|30|NZ_CP032913|CRISPRCasFinder matches to MK448589 (Streptococcus satellite phage Javan632, complete genome) position: , mismatch: 6, identity: 0.8

-agtgcccaatccacttttgaaaacagcaat	CRISPR spacer
ccgta-ccaatcgccttttgaaaacagcaag	Protospacer
  **. ******  **************** 

6. spacer 2.2|1101654|30|NZ_CP032913|CRISPRCasFinder matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 9, identity: 0.7

agtgcccaatccacttttgaaaacagcaat	CRISPR spacer
tcaaggcaatctccttttgaaaacagcaac	Protospacer
   .  *****. ****************.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	373899 : 382155	8	Streptococcus_phage(33.33%)	tRNA	NA
DBSCAN-SWA_2	776237 : 784485	8	Synechococcus_phage(33.33%)	tRNA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP032913|373899:382155|DBSCAN-SWA
TTTGTGGCTTAAAAACTTACCACCCTTAAAATACACAAACATTGTTGATCCTGGCGAGTTTATAGAATTTAAAAGCGGTAAAAAAATAGCAAAATGGTATAGCGATGGACTGACTAAAACAAAATCAGCCAAAGAGCGTCAAATTTGGAGGAGTAAAACATTTCCAGGGTTTGCAAAGGCGATGGCAGAGCAGTGGGGGGAGTTCGTAAAAAATGAGATGTTTAAAAAGGTGAAAAATGAAAGTTTATTTAAGGAAAGTTGATAGTCAATGCATCAACAACAAACGAATTAGTATTACAAAAGATATTTTAAAGCATTTTTTTGATAACGCCAACAACCAAGATGAAGTAGATATGAGTGGTATCTTGTCTGATTATAACGATAAAGTTAGTATTCTCTTAGCAACAGATCCTAGATTTGGTGGAGGAATTTATAGAATCATCCGTGCAGAAGAATATAAAATAAAAGAAACCCGATTGGATTATGAATTAAAAAGTGATGATATTTTGTTTTTTACTTGCAAATCTTATAAAAAATACACATTAGAAATCATTTTACCCACTGATACAAGATACAATGTTTTAAATGGCTTAATCAGTAATAGCAAGCATTTATTGGTTTTTAGTGAGAATGAAACGAAATCTCTGAGTGATAATAAAATAGATGAAAGCGTTAGAATAGATGGGGGAAAAAATATCATCCTTTATGGTGTTCCTGGCAGCGGCAAGAGTTATACTTTACAAAGAGATTATTGCAATGATAATAGCGTGGTAGAAAAGATAGTGTTCCATCCTGATTATTCTTATAGCGATTTTGTGGGACAGATTATGCCAAGCGTGGATGATAGCGGTATAGTCAGTTATAAATTTAACCCTGGACCTTTTACAAACATCCTAAAAAAAGCGTATCATAACCCACAAATTAAGCATGTTCTAGTGATTGATGAAATCAATCGTGGTAACGCACCTGCCATATTTGGAGAAGTTTTTCAACTTCTTGATAGGCTTAAACATGACAAAGGTGGCTTTAAAAAAGGCTCTAGTGAGTATGCTATCAATAATATGGATATTGCAAATATTGTCCATAACGATAAAAATGCAAGTATAAGAATCCCATCAAATTTATGGATAATCGCCACAATGAATACGAGCGATCAAAATGTATTCACACTAGATACTGCTTTTCAGCGTAGATTTTCTATGCAACTCATTGAAAATTCCTTTGAAAATGTTGATGATGGTTTTAAAAATATGAAAATTTTAGATACTGATATTACTTGGCAAAATTTTTGCACCACCATCAATGAAAAAATAGCTCAAAACAACGAGGGGCTGAGTTCTATGGAGGATAAGCGGTTTGGCGTTTATTTTGTGAATATTGATGATCTAAAGAGCAAAGAAAATTTTGCACATAAAGTCATCAAATACCTTTGGGACGATGTCTTTAAGTTTGATAGAAATATCATATTTGATACTACAAAATTTAATACGCTTGAAGCTGTTGTAAAGAATTTTACCAAAGAAAAAGGTAGAACCCAATTTGATATTTTTAGCGATGGTGTGAAAGAACTTTTATTTAATGTTTAATTTAAAAGAGCACTGTTTCACAGACAATGAATTGAACGATAATTTTGTAGGTATTAGAAGCATCAATAATGATTTACAAATCTGTTTCCCGCTAGGATTTGATATAAGCGATAATAAAAACATTAGAGCAGATATAAAAAAGCTTATTTCTGTTCTTTTAGAATATAATAAAGCAATTGAATGTGAAAATTTTTTAAATAATAAAAATGAGATTATAAGATCAAATTTTCCACTCACAGCGTATAAAAATGTCATAGAATATTTTTTATCGCATGGTTATTATACGGATAATAAAAGCTATTATGAAAACAGCACAAAAGGTAAAATAAATTTTTCCAAAACGATGAAGAAAAACAGACCTATTATTCAAAATCTTAATAATAAAAACTCTTTTATCTATACTCGTTTTCAAGTTAAAAGGAAAATGATCAATGAAAATGAATTGATAACAGCGATAAACAAATATTGTGTGCATGAAGCGTTTTCTAAATTTGGCTTTGTGTTTAGCTCGTTTGTGCCACCAAAATTCAAACTACCTTCTGATAAAAATTATTGCATTTATCTGCTTGAAAACAGACTAAACAGCACATTTAATGATGACAGGAAAATCCTTTTTCAATCTATGAAAAATATTCTTTTACAAGATGATAACATTTTGGATAAGACTGATTTTAAATTTGGAACATATCATTTTTATGTTGTTTGGGAAAGAATGATAGACAAGGCATTTGGTATAAAAAATAAAGAAGTTTATTTTCCTAAAACAAAATGGAATTTGCGGTGCTCTAACCAAAATTCTGATTACTTATTGCAACCAGATAGCATCATGCTGTTTGACGATAGAATTTACATATTGGATGCAAAATATTATAAATATGGCATAAGCGGAGTTGCAAGCGATTTACCCAATAGTGCATCCATCATAAAACAGATTGTTTATGGCGAATATGCGGCAAAACGAGAAACAAAAAAAGAGATTTACAATGTCTTTTTAATGCCCTTTAATAGGTTTAACAATCCGCTAAAATTGAGTAATATTTTTGAGAATATAGGTTTTGCAAATGGAGGGTGGAGAGACAATCTAAAAAAATATGAAAATATACAAGGAATTTTAATAGACACTAAATTTTTAATGCAAAATTATAATAAGAAATCCAATGATCTTTTAAAATTACTGGCAAAAAATGTGGAAGAAACTAAAATATAATTTTTAAAAATTTTAATCAAAAATCAAATCTAAAACCACAAAACAAAATTTAAAACCCCCATTTTTTAATCAAACCTACAATGAGCGTTCTATATCATCAGCGCTTAAAGGGGTGTTGGCTTTTAAGAATTTTGATGCCTTTTGGCCTAAAATTTCTTTATAAAATTTAGGGTGTAAGCCAAGGTTGGGGCGTAAGGCTTTGATATTGTTTTTAGTCAATGCTTCGCCTTTTTGAATATCCTTAATGACAAATAAAGAGCGCATAAAGAATCTTCGCTCCTCTAAAGTCTTTGGATTGGTTTTAGGCTCTTTTTCGCCCAAGGCTAAAACGCTTTGTTGGATCGCTTCAACCATGCTTTTAAATTCGTTAAAATCCATGCTAAAAGTGCTGTCTGGGGTTTGTAAGGATTTGTTTAAAATGAAATGCTTTTCTATCATGCTCGCCCCTAAAGTGGTGGCTAAAATGGGGCAAAGAGAGCCAATCGTGTGATCGCTCAAGCCAAATTTAACGCCAAAGATTTCGCCTAATTTAACCATGCTCAACAAGTTAGCGTCTTCTATTTTACTGGGATAAGCGCTCACGCATTTTAAAAGGGTGATGTCAAAATTACCCACTCCTTTGCACAACGAGATAGCGTCTTGCAATTCGGTGTGTGTAGCGATACCGCTAGAAAGGATAATGGGCTTTTGTGTGCGAGCGGCCTTTTCAATCAAATCTAAATCAACGATTTCAAAACTAGCGATTTTATACATGGGGCAATTTAGGCTCTCTAAAAGCTCTAAAGCTTGTGAGCTAAAAGGCGAGCTAAAAATGCCTAAATCAAGCTTTCTAGCCAATTCAAACAATTCCGCATGCCATTCTAGGGGGGTAGAAGCCTTTTGATACAATCCATACAGATTTTCTTTATCCCATAAAGTGCCTTGAATGATGAAGGGATCTTCTTTAGAGTTTAAAGTCATGCAGCTTGGCGTGTAGGTTTGGAGCTTGACAAAATCCGCCCCGCTTTCCTTAATGGCATGAAGGCTTTCTTTGGCTAGGTTTAGATCCTGGTTATGATTAGCGCTCAATTCAGCGACAATTTTAGGGCGTTGTAACATTTCTTATTTCTCCTTAATCAAAACTTCTTTTTCTAAGCGATAGACTTGAGAGCAAGTGAAGGCTAAATGCTCATCATGCGTGGCTAGAACTAACGCCCCTTCTTTTTCTGTAATGTAATTTTGCAGCATGCTGATGACTTGATTAGCGCTAGTGGTGTCTAAATTCCCGGTGGGTTCATCAGCGATAATGATTTTGGGTTTTTTAGAAAGCACTCTGGCGATGCTTAAACGTTGTTGCTGGCCGCCGCTCAATTCACCCACGCCTTGTTTTAGGGTGTGGGCTATGCCTAATTGTTCCAAAAGGGAATGATTTATTTCTTGCTTGGCTAGGATGGAAGCGACTTGCAAGTTTTCTAAAGCGCTAAAACCCTTAAAAAGGTAATGCGATTGGAAGATTATGCCCACTTTTAAGCGCCGTAATTCCAAAAGCTTTTTGGAATTTAAGGCATAAATATCCTGGTGTTCTAACAAACTAATCGTCCCACTATCCGGTTTTAGCATGGTGGCTAAATGGCTTAAAAGCGTGCTTTTACCGCTCCCGCTCACGCCTAAAATCGCTAGGCTTTCTTTGGGCTTGATGTGCAAATTCACGCCACTATAAAGAGGCTTTTCAAAAGCATGAGAAATATTAATCGCTTTAATCATTATCGTTTCCTAAAAAGAATATCGCCTAATAAACTAGGGCTTAAAATGTAAGAAGTTGAAAAATTCGCGCTGTGCAAGATGATTTTATCATAACGCCTTGCATAGTATTTTAAAAGCGTTCTTTGTAAGGTGGGTTCAATGCTTGGGCTAAACCATGCGTTATTGCTCATCACTATAAAAATTTTTGAAGGGCTGTTTGAATAAGCGGCTTTGGAAGTGCCTTCATAACAAATCAGAGGGCGGAAAGTAAAATCGTCTAATGTGAAATCGCTGAAACTAGAAGCGTTGCGGTATAAATAAGCGCTCTCGCCAAAAAAGAGCTTTTCAAGGGGTTTTTGAAGAAACTTGGGTAAAGGCATGGTCTCGCCAAAGGGGGCTAGGATCACTTTATCAGCGATCTGAACGCTTTCTTTAGAAAATAAAAACGAGCTGTTATAAAGGCTATAGCCTTGGGTGCGTAATGTCCCTATTAAAATAGCAATATTATCGCTCAAATCTTCTAGCTTGGCTTTAAAGGGGGAGTTTTCTAAAGCGATGGGGTAGGCGGTTTCTGGAAAAACAATCAAGGTTTTTTGCTTGTTTTGAGCGAGCTTGATTTCTTTAAGGATGTTGTTTTCAATATTATTAAGGTAGTTTGAGTCAAATTTCAAATCTTGGGGCGTTTTTGTAGAAACTAATTCAATATTTCCAACCTTTTTTAAATCGCTTGTTTTAAAACCATTAAAATCCAACGCGCCCAGTAACAATAAAACCGCTATGATCCTGCATTTTTTCAATGGTTTGGCGCTCAAAAAAATGCAAGCCAAAAAAACAAGCCCTAGCGATAATTTATCCACTCTAAACACGCTATAAGAAAAAAAGCTATCCGGGACTAACCAATCAAATCCAAAAGGGTGGATAAAACCAGAGCCTAAAAAACTCAAAAGCCTAAAATAGGGGTTTTCAAAATAGAGCAACAAATAAAATAAAACCCCATAAACTAACGCTATTAAAACAACGATTAAAGGTAATAAATAAGTGAAATCCGAGTAGCGAAAGCTTAAAGCGCACCAATAAAACAATAACGCCCCCACGAAAAACCCCAAAGCAAAAGCGCTATTTTTGGGGGTTTTTAAAAACGCCAACATGCTTAAAGGGGCTAATAGGCTTGTGAGTGTGATAGTGATATAGGGGCTTTCAATTGCATAAGCGTCCAAAACAGCGTTCACATACACGCTTGAAACAAACATGCACGCTAATAAAAAAGCGTTTTGATTGAATAGAAGAAGACGCATGGCTAAATTTTGAAACCTTGAGATTGTTTTAGTGTATTATAGCTATATTTTAATTTAAGAATTTTAGATTGATTTTTTTAAGGGTAGTTTTTTTTAAGTTGTGTTATTATTTTCAAATTTCAAGTGAGCGTGGATTGATAGCGTTAAAAAATCATGAGCGTTTTTTTGGGCGTTTTTGGGGTGCTCGCTATCTTTATGTGAGATATATGAGAGAAAGGTTTGGGTTTAGGGTGAATTATATTGATTTGGCGTTACTTGTGGTGGTGGTAGCCTTTGGGATTAGAGGATTTTATCATGGCTTTGTGAGTGAAGTGGCTGGGATTTTAGGGATTGTGCTTGGCGTGTATTTAGCGTCTCGCTATTCTGTGGCTGTTGGGCATTTATTTTCAGAGCATTTGTATGATTTAAGAAATGAAACCATGACGAATCTCATCGGTTTTTTATTGGTGTTAGCGTCTATTTGGGTGTTTTTTTTAGCTTTTGGAGTGTTGCTAGGCAAGGTGTTAGTCTTTAGCGGGTTAGGCATTATAGACAAAGCGTTAGGGTTTATTTTTTCATGCTTGAAGACTTTTTTAGTGCTTTCTTTCATCCTTTATGCACTCTCTAAAATGGAAGTGATGAAAGACGCTAACGCTTACTTGCAAGAAAAAAGCGCTTTTTTTTCTACCATGAAAAGCGTCGCTAGTAAGATCATGCGTCTTGATGGCGTCAAACATGTGGAGAAAAACCTTAAAGACAACCTTGAAGAAATGAGCGATGAAGTCAAAAATAAAGAATCTTTCAATAAAAATAAAGAGTCTTTTAATAAAGCGATGGATAAGGGCGTGGAATCTTTAAAAGAAAAGGCTAAAGATTTGCCTAAAAACATGCTAGATCCAAAAGCTAACCAAACCCTACCAAACCCCACCCCATCTAATAAAGAACCCCTATAAAGGCATCACATGTTTTCTAACCAATACATCCAACAACGCATCCATAAAGCCAATAGCTTGAGAGAAGAAGGCAAAAACCCTTATCAAAATGGCTTGAAACGAAGCCTCACCAACGCCGCTTTTTTAGAAAAATACGCTTATGTTAAGGATTTAGAAGAGCCTAAAGACAAAGAAAAATGCGAGAGTATTGTAGGGAGGGTCAAGCTTTTGCGTTTAATGGGTAAGGCATGTTTTATTAAAGTTGAAGACGAAAGTGCGATTTTGCAAGCCTATGTTTCGCAAAATGAATTGAACGATGAGTTTAAAAGCTTGAAAAAGCATTTAGAAGTGGGTGATATTGTGTTGGTGAAAGGCTTCCCTTTTGCTACCAAAACCGGTGAATTAAGCATTCATGCCATGGAATTTCATATTTTAAGCAAAACCATTGTGCCTTTACCTGAAAAGTTTCACGGACTAAGCGATATAGAATTGCGCTACCGCCAGCGCTACTTGGATTTGATTGTTAATCCTAGCGTTAAAGATGTGTTTAAAAAGCGCAGTTTGATTGTCTCTAGCGTGCGGAAATTCTTTGAAATGGAAGGGTTTTTAGAAGTGGAAACCCCTATGATGCACCCCATTCCTGGCGGGGCGAACGCAAGACCTTTTATCACTTATCATAACGCTTTAGAAGTTGAAAGGTATTTGAGAATCGCTCCAGAATTATACCTCAAACGCTTGATTGTGGGGGGGTTTGAAGCGGTGTTTGAAATCAATCGTAATTTCAGGAATGAGGGCATGGATCACAGCCATAACCCCGAATTCACGATGATTGAATTTTATTGGGCGTATCACACTTATGAAGATTTGATTGAACTCAGTAAGAGGCTGTTTGACTACTTGCTAAAGACTTTGAACTTACCTTCAAAAATCATTTATAACGATATGGAAGTGGATTTCAACCAAACGAGTGTGATTTCCTATTTGGACGCTTTAGAAACGATAGGGGGCATCAGTAAGGATATTTTAGAAAAAGAAGACAGGCTTTTGGCTTATTTGTTAGAGCAAGGCGTCAAAGTAGAGCCAAACCTCACTTATGGCAAGTTGCTCGCTGAAGCGTTTGATCATTTTGTAGAGCACCAACTCATTAACCCCACTTTTGTAACCCAATACCCTATTGAGATTAGCCCCTTAGCCAGACGCAACGATAGTAACCCTAATATTGCTGACAGGTTTGAATTGTTCATTGCAGGAAAAGAAATCGCTAACGGCTTTAGCGAGTTGAACGATCCTTTAGATCAATTAGAACGCTTTAAAAATCAAGTGGCTGAGAAAGAAAAAGGCGATGAAGAAGCCCAATACATGGATGAAGATTATGTGTGGGCATTAGCCCATGGAATGCCCCCCACTGCAGGGCAAGGCATAGGCATTGACAGGTTAGTGATGTTACTCACTGGAGCTAAAAGCATTAAAGATGTGATTTTATTCCCAGCGATGCGTCCTGTTAAAAACGATTTTAATATTGAGAGTGGAGAATAA

Protein sequences of DBSCAN-SWA_1

>NZ_CP032913|373899:382155|375476_376691_+|WP_139524010.1|DBSCAN-SWA
MFNLKEHCFTDNELNDNFVGIRSINNDLQICFPLGFDISDNKNIRADIKKLISVLLEYNKAIECENFLNNKNEIIRSNFPLTAYKNVIEYFLSHGYYTDNKSYYENSTKGKINFSKTMKKNRPIIQNLNNKNSFIYTRFQVKRKMINENELITAINKYCVHEAFSKFGFVFSSFVPPKFKLPSDKNYCIYLLENRLNSTFNDDRKILFQSMKNILLQDDNILDKTDFKFGTYHFYVVWERMIDKAFGIKNKEVYFPKTKWNLRCSNQNSDYLLQPDSIMLFDDRIYILDAKYYKYGISGVASDLPNSASIIKQIVYGEYAAKRETKKEIYNVFLMPFNRFNNPLKLSNIFENIGFANGGWRDNLKKYENIQGILIDTKFLMQNYNKKSNDLLKLLAKNVEETKI
>NZ_CP032913|373899:382155|376766_377789_-|WP_139524011.1|DBSCAN-SWA
MLQRPKIVAELSANHNQDLNLAKESLHAIKESGADFVKLQTYTPSCMTLNSKEDPFIIQGTLWDKENLYGLYQKASTPLEWHAELFELARKLDLGIFSSPFSSQALELLESLNCPMYKIASFEIVDLDLIEKAARTQKPIILSSGIATHTELQDAISLCKGVGNFDITLLKCVSAYPSKIEDANLLSMVKLGEIFGVKFGLSDHTIGSLCPILATTLGASMIEKHFILNKSLQTPDSTFSMDFNEFKSMVEAIQQSVLALGEKEPKTNPKTLEERRFFMRSLFVIKDIQKGEALTKNNIKALRPNLGLHPKFYKEILGQKASKFLKANTPLSADDIERSL
>NZ_CP032913|373899:382155|374134_375484_+|WP_139524009.1|DBSCAN-SWA
MKVYLRKVDSQCINNKRISITKDILKHFFDNANNQDEVDMSGILSDYNDKVSILLATDPRFGGGIYRIIRAEEYKIKETRLDYELKSDDILFFTCKSYKKYTLEIILPTDTRYNVLNGLISNSKHLLVFSENETKSLSDNKIDESVRIDGGKNIILYGVPGSGKSYTLQRDYCNDNSVVEKIVFHPDYSYSDFVGQIMPSVDDSGIVSYKFNPGPFTNILKKAYHNPQIKHVLVIDEINRGNAPAIFGEVFQLLDRLKHDKGGFKKGSSEYAINNMDIANIVHNDKNASIRIPSNLWIIATMNTSDQNVFTLDTAFQRRFSMQLIENSFENVDDGFKNMKILDTDITWQNFCTTINEKIAQNNEGLSSMEDKRFGVYFVNIDDLKSKENFAHKVIKYLWDDVFKFDRNIIFDTTKFNTLEAVVKNFTKEKGRTQFDIFSDGVKELLFNV
>NZ_CP032913|373899:382155|378433_379708_-|WP_139524012.1|DBSCAN-SWA
MRLLLFNQNAFLLACMFVSSVYVNAVLDAYAIESPYITITLTSLLAPLSMLAFLKTPKNSAFALGFFVGALLFYWCALSFRYSDFTYLLPLIVVLIALVYGVLFYLLLYFENPYFRLLSFLGSGFIHPFGFDWLVPDSFFSYSVFRVDKLSLGLVFLACIFLSAKPLKKCRIIAVLLLLGALDFNGFKTSDLKKVGNIELVSTKTPQDLKFDSNYLNNIENNILKEIKLAQNKQKTLIVFPETAYPIALENSPFKAKLEDLSDNIAILIGTLRTQGYSLYNSSFLFSKESVQIADKVILAPFGETMPLPKFLQKPLEKLFFGESAYLYRNASSFSDFTLDDFTFRPLICYEGTSKAAYSNSPSKIFIVMSNNAWFSPSIEPTLQRTLLKYYARRYDKIILHSANFSTSYILSPSLLGDILFRKR
>NZ_CP032913|373899:382155|377792_378434_-|WP_097715283.1|DBSCAN-SWA
MIKAINISHAFEKPLYSGVNLHIKPKESLAILGVSGSGKSTLLSHLATMLKPDSGTISLLEHQDIYALNSKKLLELRRLKVGIIFQSHYLFKGFSALENLQVASILAKQEINHSLLEQLGIAHTLKQGVGELSGGQQQRLSIARVLSKKPKIIIADEPTGNLDTTSANQVISMLQNYITEKEGALVLATHDEHLAFTCSQVYRLEKEVLIKEK
>NZ_CP032913|373899:382155|380649_382155_+|WP_139524014.1|tRNA|DBSCAN-SWA
MFSNQYIQQRIHKANSLREEGKNPYQNGLKRSLTNAAFLEKYAYVKDLEEPKDKEKCESIVGRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFATKTGELSIHAMEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISKDILEKEDRLLAYLLEQGVKVEPNLTYGKLLAEAFDHFVEHQLINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMRPVKNDFNIESGE
>NZ_CP032913|373899:382155|379914_380640_+|WP_139524013.1|DBSCAN-SWA
MRERFGFRVNYIDLALLVVVVAFGIRGFYHGFVSEVAGILGIVLGVYLASRYSVAVGHLFSEHLYDLRNETMTNLIGFLLVLASIWVFFLAFGVLLGKVLVFSGLGIIDKALGFIFSCLKTFLVLSFILYALSKMEVMKDANAYLQEKSAFFSTMKSVASKIMRLDGVKHVEKNLKDNLEEMSDEVKNKESFNKNKESFNKAMDKGVESLKEKAKDLPKNMLDPKANQTLPNPTPSNKEPL
>NZ_CP032913|373899:382155|373899_374160_+|WP_120869387.1|DBSCAN-SWA
MWLKNLPPLKYTNIVDPGEFIEFKSGKKIAKWYSDGLTKTKSAKERQIWRSKTFPGFAKAMAEQWGEFVKNEMFKKVKNESLFKES

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_120869387.1|373899_374160_+	hypothetical protein	S0A2X1	Cellulophaga_phage	7.6e-11	53.0
WP_139524009.1|374134_375484_+	AAA domain-containing protein	M1NSM1	Streptococcus_phage	2.3e-82	47.9
WP_139524010.1|375476_376691_+	LlaJI family restriction endonuclease	Q6DMW8	Streptococcus_phage	6.0e-66	35.9
WP_139524011.1|376766_377789_-	pseudaminic acid synthase	A0A1B1IVE2	uncultured_Mediterranean_phage	4.1e-31	34.5
WP_097715283.1|377792_378434_-	ABC transporter ATP-binding protein	A0A2H4UUX5	Bodo_saltans_virus	4.7e-09	26.6
WP_139524012.1|378433_379708_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA
WP_139524013.1|379914_380640_+	CvpA family protein	NA	NA	NA	NA
WP_139524014.1|380649_382155_+|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	1.2e-92	41.1

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP032913|776237:784485|DBSCAN-SWA
TTTAATCCAATTCCTTAAGGCGCTTTAACAATTCTTCTTCATTCAAAACGCTCACGCCATGTTTTTGTGCTAGAGCGAGTTTTGAACCAGCGTTTTCTCCAACGATTAAAAAATCGGTTTTAGCACTCACGCTTGAAGAAATTTTTGCCCCTAAATTTTCCAACATTTGAGCGTATTCTTGCCGTGGTTTAGAAAGCGTGCCGGTTAAAACAATCGTTTTGTTATTGAAAACAGAAGAGCTTTCTTGCTTTTCTTCAGTCATATCGCTGTCTTTAGGGTTCAACAAATCAAATAACGATCGGATAAATTCCTGATTGCTCGCATAAAAATTGACTAAAGAGCGCGCCATTTCCACCCCAAAGCCTTCCATTTCTAAAAACTCGGCTTCGCTTTTTTCTAACACATTTAAGCCGTATCTGGCTAGCGTTTTACTCGCTCCCTTACCAATATGCTCAATCCCTAAAGCGTTAATCAAACGCCATAAGGGAGGGTTTTTGCTTTTTTGAATAGCGTCTAATAGATTTTGAGCTTTTTTGATTTTGAATTTGTCTAGCCGCATTAAATCTTCTAATTTTAAAGCATACAAATCCAGGGCGTTAACAATGAGTTTTTCTTCAAAAAGTTGCTCTATGACTTTATCGCCTAAGCCTTGAATGTTTAAAGCGTCCTTAGAAGCGAAATGAATCAAGCTTTCTTTCAACCTTGCCGGGCAATTAAGGTTTTGACAATAAGTAAAAATCTCTTCGCGCAAAAGCTCATGCGAACATATAGGGCAAACTTTGGGGCGTTCAATTTTGTGTTGCGAGCCGTCTCTATAAGATTCTAAAGGCTTGATGATTTTAGGGATCACATCGCCGCTTCTAATGACAACGACCCTATCATTGAGCATGATATTCTTTTTTTCAATTTCAGAATAATTGTGTAAGGTCGCTTTCGTAATCATGGCTCCAGCAATTTCTACAGGCTCTAAAAGAGCGACCGGTGTGATCGCCCCGCTGCGCCCCACTTGGTTAATGACTCCTATAATTTTGGTGTGTTTTTCTAGAGCCGGGAATTTATAAGCACAAGCGAATTTAGGGGATTTTTGCGTGTAGCCTAGCTCCTTTTGAATATTTAATTCATTCACAACGATCACCATGCCGTCTAAAAGGGCAAAAAAGCTCTCCCTTTCTCTAATCAGGGTGTGGTAATTTTCTTCTATTTCTTGGTGGTTTTTGTTTAGGCTTAAATATTGAATGGTGCTAAAACCTAACGAGACGATAAAATCCAAACACTCCTTAAAGCTTAAAAAATTTAAAGAATGCTTGCCCACGCCCCAAGGAATGAATTGCAATTTACGCTTTTTAGTGATTTCGCTATCAAGCTGCCTCAAACTCCCTGATGCGGCATTTCTAGGGTTAGCGAATAGGGGTTCGTTAGCGTTTAAGCGCTCTTTGTTTAAAGCGTCAAAATCCTCTTTAGAAATGATCACCTCGCCCCTGATTTCTATTTCTCCATCATAAGCGATAAAATGGGGGATATTAGCGATGTGTTTAGCGTTGTTAGTAACAAGCTCTCCTTCTAAGCCATTACCCCTAGTGGTTGCACTCACTAGCTTGCCATGGTGATACAAAAGATTGAGCGAAACCCCATCAAGTTTGGGCGAACACACGAACGAAGCGCTAGGATAGGCTTTTAAAATGCGTTGCAACCACGCTTGCAATTCGTTTTGATTGAACACATCATCTAAGCTCCACATCCGCATTAAATGGGGGTTCTTATTGAACGAATTGGTGGCAGTAGCCCCCACTTTTTGGGTAGGGGAATTAGCTTGAATGTGATTAGGGTTTTTTTCTTCATAAGCTTTTAATTCTTGGTAAAGTTCATCATAGACTGCATCGCTTACGATGGGTTCATCAAGGTTGTAATAATGGTGCGATAAGGTGTTTAAATATTCAATTCTTTCTAAATATTCTTTTTGGCTTTTTATCATTTTTGTAAAAACCTTTTAAACTAAATTAGGGTAGTATTATAACATTTAATCTTTGATAGGGCTTTAGGGGAAATTAGGTGGTAAGAGACATTGACAAAACGACTTCGTTGCACTTGAACAACGAAGCGCAATTTCTGTGTTTTAGATTAGATGCAGAAAAAGACGCCCAACTTTATGGCATGAATATTTTTAAGATCCGAGAAATCATCCATTATGACGGGGAGATTACAGAGATTCTTGGAGGGAGCGATGGCGTGATGCTTGGGTTTTTGAGCGTTAGGGGCGAATCCATTCCTTTAGTGGATGTGAAAAGGTGGTTGCATTATAACGCTAATGATCCGAGCCGTGATTTAAAAGAATGCAGCGTTAAAGATGACCATAATTTGGTGATCGTGTGCCATTTTTCTAACCATTCCATCGCTCTAAAAGTTTTAAAAATTGAAAGGATCATTCATAAAAATTGGACTGAGATTAGCGCTGGAGACAAACAAGGCATTAATGAAGAGGGTAAACTTAGCGCTATCACCCGTTTTGATGAACAACGAGTGGTGCAGATCTTAGATGTGGAAAAAATGATTAGCGATGTTTTCCCTAGCTTGAAAGATTTAGACGATTTGACTTTGCGTTGCATAGAAGCCATTCAAAGCCAAAAACTCATTTTAATCGCTGAAGACTCTCTAAGCGCTCTTAAAACCCTAGAAAAGATCGTTCAAACTTTGGAATTGCGTTATTTAGCCTTTCCAAACGGGAGGGAATTGTTGGATTATTTGTATGAAAAAGAACATTACCAACAAGTCGGCGTGGTCATTACGGATTTAGAAATGCCTGTTATTTCAGGGTTTGAAGTGTTAAAAACCATTAAAGCTGATCATAGAACTGAGCATCTTCCTGTGATTATCAATTCGTCCATGAGCAGCGATTCTAACCGCCAGTTAGCCCAATCTTTAGAAGCGGATGGTTTTGTGGTAAAATCTAACATTCTTGAAATCCATGAAATGCTTAAAAAAACGCTTTCATAAATTTAATTTTTGTTTTAATTTAAAGGGATAAAACATGCGAAGTCATTTTTGCACAGAAATTAGTGAAAAAGATGTGGGTAAAACCATCAAAGTGGCCGGGTGGTGTAACACTTATAGAGACCATGGAGGCGTGGTTTTTATTGATTTAAGGGATAAGAGCGGTTTAGTGCAACTCGTCTGTGATCCTAGCTCTAAGGCTTATGAAAAGGCTTTAGAAGTCAGGAGCGAATTTGTGCTAGTGGCTAAAGGAAGAGTGCGTTTGAGAGGCGCTGGGTTAGAAAACCCTAAACTAAAGACCGGTAAAATTGAAATCGTTTTAGAAGAATTAGTCATTGAAAATAAAAGCGCTACCCCACCGATTGAAATTGGCAATAAAAGCGTGAATGAAGATTTGCGCTTGAAATACCGCTATTTGGATTTGCGCTCTTTGAACGCTTATGAAATCTTCAAATTGCGCAGCGAAGTGGCTCTTATTACTCGTAACACTCTAGCCCAAAAGGGCTTTTTAGAGATTGAAACCCCCATTTTGTCTAAAACCACGCCTGAGGGGGCTAGGGATTATTTAGTGCCAAGCAGGGTGCATGAGGGCGAATTTTTCGCGCTTCCCCAAAGCCCGCAATTATTCAAACAGCTTTTAATGGTGGGGGGAATGGATAGGTATTTTCAAATCGCTCGTTGCTTTAGAGATGAAGATTTAAGAGCGGACAGGCAGCCAGAATTCACGCAAATTGATGCGGAAATGAGCTTTTGCGATGAAAATGATGTGATGGGCGTGGTGGAAGATTTGTTGCAAGAGGTTTTTAAAGCGATTGGGCATACTATTTCTAAACCTTTTAAACGCATGCCTTATAACGAAGCGATGGAAAATTACGGGAGCGATAAGCCGGATTTACGCTTTGAATTGCCTTTAATAGAAGTGGGGGATTGTTTTATGGACAGCTCAAACGCTATTTTTTCTAATATCGCAAAAGATCCTAAAAACAAACGCATCAAAGCTTTAAACGTTAAGGGGGCTGATGCGCTTTTTAGCCGCAGCGTTTTAAAAGAATTAGAAGAATTTGTGCGCCAATTTGGGGCTCAAGGCTTAGCGTATTTGCAGATTAAAGAAGATGAAATTAAAGGGCCTTTAGTTAAATTTTTAAGCGAAAAAGGACTTAAGAATATTTTAGAAAAAACTGGTGCAAAAACTGGGGATATTGTCTTTTTTGGAGCGGGAGATAAAAAAATCGTATTAGACTACATGGGGCGCTTGCGCTTGAAGGTGGCTGAAACGCTTGATTTGATTGATAAAGACGCTTTGAATTTTTTATGGGTAGTCAATTTCCCCATGTTTGAAAAAACCGAAAACGGCTATCATGCTGCACACCACCCTTTTACGATGCCTAAAAATATAGAATGCGAAGATATAGAAGAGGTTGAAGCGCATGCGTATGATGTGGTGCTTAATGGCGTGGAGCTTGGTGGGGGGAGCATAAGGATTCATAAAGAAGAAATGCAAAAAAAAGTCTTTGAAAAAATCAATATCCACGAAGAGGAAGCGCAAAAGAAATTTGGCTTTTTACTAGAGGCGCTAAAGTTTGGCGCTCCTCCTCATGGGGGCTTTGCGATAGGCTTTGATCGCTTGATCATGCTAATGACTAAATCTAGTAGCATTAGAGATGTGATCGCTTTCCCTAAAACGCAAAAAGCTTCATGTTTATTGACTGACGCTCCTAGCCCCATTAATGAAGAGCAACTAAGAGAATTACACATTCGCTTGAGAAAATAATTTAAAAGGATATGATATGAAACAACTATTTTTGATTATTGGAGCCCCAGGGAGTGGTAAAACCACTGATGCAGAGCTTATCGCTAAGAATAACAGCGAAAAAATCGCTCATTTTTCTACCGGGGATTTACTAAGGGCTGAGAGCGCTAAAAAGACCGAGCGAGGCTTATTGATTGAAAAATTCACTTCTCAAGGCGAATTAGTGCCTTTAGAAATTGTGGTAGAAACGATCCTTTCAGCGATTAAAAGTTCTAGCAAAGGGATTATTTTAATTGATGGCTATCCCAGGAGCGTGGAACAAATGCAGGCTTTGGATAAGGAATTGAACGCTCAAAATGAAGTGGTTTTAAAAAGCGTGATTGAAGTAAAAGTGAGTGAAAACACCGCTAAAGAAAGGGTTTTAGGGCGCTCTAGGGGGGCTGATGATAATGAGGTCGTGTTTCATAACCGCATGCGGGTGTTTTTGGATCCCTTAGCTGAAATCCAAAATTTCTACAAGGCTAAACATTTGCATAAAGTTATCAATGGCGAAAGAAGCATTGAAGAAATCGTGCATGAAATGCAAGAGTATATTTTGTCTTTTGAATATTGAGATTGGCTAGTAAGGAAAATAGCTGTGATTTCTGTCTATATCATTTCTTTAAAAGAAAGTCAAAGGCGTTTGGATACTGAAAAACTCGTTTTAGAATCCAATGAAAAATTTAAAGGCCGTTGTGTTTTCCAAATCTTTGACGCTATTAGCCCTAAACATGAAGATTTTGAAAAATTACTTCAAGAGCTTTATGACGCTCAAAGTTTATTGCAATCTGATTGGTATCATTCTTATGTTGGTGCTGGTTTGACTTTGCCTGAATTAGGGTGCTATTTAAGCCATTATCTTTTGTGGAAAGAATGCGTCAAATTAAACCAACCGATCGTCATTTTAGAAGATGATGTAGCCTTAGAGTCTAATTTCATGCAAGCCTTAGAAGATTGCTTGAAAAGCCCTTTTGATTTTGTGAGACTCTATGGGTGCTATTGGTATTACCACGAGACAAAATTCCATATTTTACCCAAAGAATTTGTATTTCCTCCCTTTGATTATCCTTTTAAAAATAACCCTATTTTAGAAAAAATTAAAAAATTTTTTGATGTTTCTAGATTTTTAAATCTTTCTACCCATAAAGTCATTCATTATATTCTCAAAAAAATACAAAAAAGCTATTACGCAACGCATGAAAAAGAAGCCTTTTTCTTAGAGCATTTTTATCTCACCAGCGTGTATGTGGCTTCTACAGCAGGATACTATATCACACCTAAAGGAGCTAAAACTTTTATAGAAGCCACGGAGCGTTTTAAAATCATAGAGCCGGTGGATATGTTTATGGATAATTCTGCTTATCATGATATAGCGAATCTGACTTATGTGCCTTGCCCTGTTTCTTTAAGTGAGCATTCTTTAGACAGCACCATTCAAAAGCCCCAAAAAAAGAGCTTGAAATCTTACCCATTTCCGCCTAAAAAATCAACTTTTAAGAATCTTTTCTACTACAGCCTTAACGCTAAAAAGCGTTTAAAAGCCTTTCAACAATACAGCAAACAATACGATTATTTAAAAACCCCTAAAGAGGTTTAAAAAGAATGAAAAAACTTTATGGTAGAATGCCATAGAATGCCATATTTAGGAGTTCATTTGACACAAGCTTATATCATTTCTTTAAAAGAAAGTCAAAGGCGTTTGGATACTGAAAAACTCGTTTCAGAATCCAATGAAAAATTTAAAGGCCGTTGTGTTTTTCAAATCTTTGACGCTATTAGCCCCAAACACGAAGATTTTGAAAAATTCGTTCAAGAGCTTTATGATTCTTCAAGTATGTTAAAATCCGATTGGTTCCATTCTGATTATTGTTATCAAGAATTATTGCCCCAAGAATTTGGGTGCTATTTAAGCCATTATTTTTTATGGAAAGAATGCGTCAAAACAAACCAACCGGTCGTCATTTTAGAAGATGACGTAGCGCTAGAATCTAATTTCATGCAAGCTTTAGAAGATTGCTTGAAAAGCCCTTTTGATTTTGTGAGACTCTATGGGCATTATTGGGGAGGCCATAAAACCAATTTGCACTCTCTCCCTATCTATACAGAAACTGAAGAGGCTGAAGCACCTATTGAAAAAACGCCTATTGAAAATCATGAAGTTACCCCCCCCCCCCCAATCCCGCACAAGATGCGCAACAAGACTCTATTATTGAAACGCAACAAGACCCTAAAGAACTATCTGAGCCTTGCAAAATAGCGCCCCAAAAAATCTCTTTTACCCAAGTGGTTTTTAAAAAAATTAAAAGAAAGCTCAACCACTTCATTGGAAATATTTTAGCTCGGACAGAAGTGTATAAGAATGTCGTGGCAAAATACGATGATCTCACCGAAAAATACGATGATCTCACAGGAAAATACGACGAACTCATGGGAAAATACGAATCCTTACTAGCAAAAGAAACAAACATCAAAGAGACCTTTTGGGAAAGGCGCGCTGATAGCGAAAAAGAAGCCTTTTTTTTAGAGCATTTTTATCTCACCAGCGTGTATGTGGCTTCTACGGCAGGCTACTACCTCACGCCTAAGGGCGCTAAAACTTTTATAGAAGCCACGGAGCGTTTTAAAATCATAGAGCCGGTGGATATGTTTATGAACAACCCCACTTACCATGATGTTGCTAATCTAACTTATTTGCCTTGCCCTATTTCTTTAAACAAGCATGCTTTCAATAGCACCATTCAAAATGCAAAAAAGCCTGACATTTCATTAAAGCCCCCTAGAAAATCTTATTTTGATAATCTTTTTTATCATAAATTTAACGCCAGAAAGTGCTTAAAAGCCTTTCACAAATACAGCAAACAATACGCTCCTTTAAAAACCCCTAAAGAGGTTTAAAAAGAGCGGGCTTTATGTTAGAATAATTCTTTTTTATTATTCAAAGGAGATTGCAATGAATTTAGACCAATTAGAAGTAAGCCATGACGCTGATTCTTTGTGCGTGGTGATTGAAATATCCAAGCATTCTAATATCAAGTATGAATTGGATAAAGAAAGCGGGGCTTTAATGGTGGATAGGGTGCTTTATGGGGCACAAAATTACCCCGCGAATTACGGCTTTGTGCCTAACACTTTAGGATCTGATGGCGACCCTGTAGATGCACTTGTTTTAAGCGATGTGGCTTTTCAAGCCGGGAGCGTAGTGAAAGCGCGCTTGGTTGGGGTTTTGAACATGGAAGATGAAAGCGGAATGGATGAAAAACTGCTCGCTCTACCCATAGATAAGATTGATCCCACGCATTCCTATGTCAAAGATATTGATGATTTATCCAAACACACTTTAGATAAAATCAAGCATTTTTTTGAAACTTACAAGGATTTAGAGCCTAATAAATGGGTGAAAGTCAAGGGGTTTGAAAACAAAGAGAACGCGATTAAGGTTTTAGAGAAAGCGATAAAAGCCTATCAAGGCTAA

Protein sequences of DBSCAN-SWA_2

>NZ_CP032913|776237:784485|778285_779227_+|WP_139524270.1|DBSCAN-SWA
MVRDIDKTTSLHLNNEAQFLCFRLDAEKDAQLYGMNIFKIREIIHYDGEITEILGGSDGVMLGFLSVRGESIPLVDVKRWLHYNANDPSRDLKECSVKDDHNLVIVCHFSNHSIALKVLKIERIIHKNWTEISAGDKQGINEEGKLSAITRFDEQRVVQILDVEKMISDVFPSLKDLDDLTLRCIEAIQSQKLILIAEDSLSALKTLEKIVQTLELRYLAFPNGRELLDYLYEKEHYQQVGVVITDLEMPVISGFEVLKTIKADHRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKSNILEIHEMLKKTLS
>NZ_CP032913|776237:784485|783963_784485_+|WP_120837206.1|DBSCAN-SWA
MNLDQLEVSHDADSLCVVIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLLALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKENAIKVLEKAIKAYQG
>NZ_CP032913|776237:784485|776237_778208_-|WP_139524269.1|DBSCAN-SWA
MIKSQKEYLERIEYLNTLSHHYYNLDEPIVSDAVYDELYQELKAYEEKNPNHIQANSPTQKVGATATNSFNKNPHLMRMWSLDDVFNQNELQAWLQRILKAYPSASFVCSPKLDGVSLNLLYHHGKLVSATTRGNGLEGELVTNNAKHIANIPHFIAYDGEIEIRGEVIISKEDFDALNKERLNANEPLFANPRNAASGSLRQLDSEITKKRKLQFIPWGVGKHSLNFLSFKECLDFIVSLGFSTIQYLSLNKNHQEIEENYHTLIRERESFFALLDGMVIVVNELNIQKELGYTQKSPKFACAYKFPALEKHTKIIGVINQVGRSGAITPVALLEPVEIAGAMITKATLHNYSEIEKKNIMLNDRVVVIRSGDVIPKIIKPLESYRDGSQHKIERPKVCPICSHELLREEIFTYCQNLNCPARLKESLIHFASKDALNIQGLGDKVIEQLFEEKLIVNALDLYALKLEDLMRLDKFKIKKAQNLLDAIQKSKNPPLWRLINALGIEHIGKGASKTLARYGLNVLEKSEAEFLEMEGFGVEMARSLVNFYASNQEFIRSLFDLLNPKDSDMTEEKQESSSVFNNKTIVLTGTLSKPRQEYAQMLENLGAKISSSVSAKTDFLIVGENAGSKLALAQKHGVSVLNEEELLKRLKELD
>NZ_CP032913|776237:784485|781011_781587_+|WP_139524272.1|DBSCAN-SWA
MKQLFLIIGAPGSGKTTDAELIAKNNSEKIAHFSTGDLLRAESAKKTERGLLIEKFTSQGELVPLEIVVETILSAIKSSSKGIILIDGYPRSVEQMQALDKELNAQNEVVLKSVIEVKVSENTAKERVLGRSRGADDNEVVFHNRMRVFLDPLAEIQNFYKAKHLHKVINGERSIEEIVHEMQEYILSFEY
>NZ_CP032913|776237:784485|779261_780995_+|WP_139524271.1|tRNA|DBSCAN-SWA
MRSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALEVRSEFVLVAKGRVRLRGAGLENPKLKTGKIEIVLEELVIENKSATPPIEIGNKSVNEDLRLKYRYLDLRSLNAYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCDENDVMGVVEDLLQEVFKAIGHTISKPFKRMPYNEAMENYGSDKPDLRFELPLIEVGDCFMDSSNAIFSNIAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAQGLAYLQIKEDEIKGPLVKFLSEKGLKNILEKTGAKTGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIECEDIEEVEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK
>NZ_CP032913|776237:784485|782667_783270_+|WP_139524921.1|DBSCAN-SWA
MTQAYIISLKESQRRLDTEKLVSESNEKFKGRCVFQIFDAISPKHEDFEKFVQELYDSSSMLKSDWFHSDYCYQELLPQEFGCYLSHYFLWKECVKTNQPVVILEDDVALESNFMQALEDCLKSPFDFVRLYGHYWGGHKTNLHSLPIYTETEEAEAPIEKTPIENHEVTPPPPIPHKMRNKTLLLKRNKTLKNYLSLAK
>NZ_CP032913|776237:784485|781611_782610_+|WP_139524273.1|DBSCAN-SWA
MISVYIISLKESQRRLDTEKLVLESNEKFKGRCVFQIFDAISPKHEDFEKLLQELYDAQSLLQSDWYHSYVGAGLTLPELGCYLSHYLLWKECVKLNQPIVILEDDVALESNFMQALEDCLKSPFDFVRLYGCYWYYHETKFHILPKEFVFPPFDYPFKNNPILEKIKKFFDVSRFLNLSTHKVIHYILKKIQKSYYATHEKEAFFLEHFYLTSVYVASTAGYYITPKGAKTFIEATERFKIIEPVDMFMDNSAYHDIANLTYVPCPVSLSEHSLDSTIQKPQKKSLKSYPFPPKKSTFKNLFYYSLNAKKRLKAFQQYSKQYDYLKTPKEV
>NZ_CP032913|776237:784485|783218_783908_+|WP_139524274.1|DBSCAN-SWA
MIETQQDPKELSEPCKIAPQKISFTQVVFKKIKRKLNHFIGNILARTEVYKNVVAKYDDLTEKYDDLTGKYDELMGKYESLLAKETNIKETFWERRADSEKEAFFLEHFYLTSVYVASTAGYYLTPKGAKTFIEATERFKIIEPVDMFMNNPTYHDVANLTYLPCPISLNKHAFNSTIQNAKKPDISLKPPRKSYFDNLFYHKFNARKCLKAFHKYSKQYAPLKTPKEV

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139524269.1|776237_778208_-	DNA ligase (NAD(+)) LigA	A0A0K2QQN8	Ralstonia_phage	1.3e-97	34.1
WP_139524270.1|778285_779227_+	response regulator	Q56AR1	Bacillus_thuringiensis_phage	7.1e-22	28.9
WP_139524271.1|779261_780995_+|tRNA	aspartate--tRNA ligase	A0A1V0SIS0	Klosneuvirus	2.4e-15	22.7
WP_139524272.1|781011_781587_+	adenylate kinase	NA	NA	NA	NA
WP_139524273.1|781611_782610_+	glycosyltransferase family 25 protein	A0A1D8KNF8	Synechococcus_phage	5.0e-10	28.3
WP_139524921.1|782667_783270_+	glycosyltransferase family 25 protein	A0A1D8KNF8	Synechococcus_phage	1.8e-07	25.2
WP_139524274.1|783218_783908_+	glycosyltransferase family 25 protein	NA	NA	NA	NA
WP_120837206.1|783963_784485_+	inorganic diphosphatase	A0A1B1ISK6	uncultured_Mediterranean_phage	2.5e-37	46.4