CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP040936	Hymenobacter sp. DG01 chromosome, complete genome	3 crisprs	WYL,RT,cas3,DEDDh,PD-DExK,csa3	0	0	1	0
NZ_CP040937	Hymenobacter sp. DG01 plasmid unnamed, complete sequence	0 crisprs	csa3	0	0	17	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP040936_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040936_1

2149929-2150018

Orphan

Consensus_repeat	Method
GCGGCGTTGTTGTTGCCGGTTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040936_1

>merge|NZ_CP040936|1|2149929-2150018|CRISPRCasFinder
GTGATGTTGCCGTTGCCGGTTTGGGTCACGTCGCTGCTGTTAAAGCGGGCCCCCTGGTAGGTGCGCGCGTCGTTGCTGTTACCCACCTGC

>NZ_CP040936|1|1|2149929-2150018|CRISPRCasFinder
GTGATGTTGCCGTTGCCGGTTTG	GGTCACGTCGCTGCTGTTAAAGCGGGCCCCCTGGTAGGTGCGC
GCGTCGTTGCTGTTACCCACCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040936.1\|WP_139923469.1\|2160664_2161636_+\|type-IX-secretion-system-membrane-protein-PorP/SprF	unknown	unknown	gnl\|CDD\|274625
NZ_CP040936.1\|WP_139923473.1\|2162258_2162606_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040936.1\|WP_139923477.1\|2165319_2165961_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040936.1\|WP_139923456.1\|2145673_2147077_-\|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase	unknown	unknown	gnl\|CDD\|274396
NZ_CP040936.1\|WP_139926073.1\|2164084_2165275_+\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100081
NZ_CP040936.1\|WP_139923463.1\|2152120_2153155_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223267
NZ_CP040936.1\|WP_139923471.1\|2161639_2161879_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040936.1\|WP_139923465.1\|2153158_2154184_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274923
NZ_CP040936.1\|WP_139923442.1\|2138719_2140060_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|378005
NZ_CP040936.1\|WP_139923449.1\|2142220_2143312_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|212494
NZ_CP040936.1\|WP_139926072.1\|2154342_2155203_-\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|238572
NZ_CP040936.1\|WP_139923459.1\|2147354_2149277_-\|gliding-motility-associated-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|372639
NZ_CP040936.1\|WP_139923445.1\|2140110_2141460_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|226576
NZ_CP040936.1\|WP_139923440.1\|2137696_2138533_-\|glucose-1-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|133015
NZ_CP040936.1\|WP_139923475.1\|2163387_2164044_+\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|319790
NZ_CP040936.1\|WP_139923438.1\|2137061_2137703_-\|PIG-L-family-deacetylase	unknown	unknown	gnl\|CDD\|225031
NZ_CP040936.1\|WP_139923453.1\|2144660_2145443_-\|WecB/TagA/CpsF-family-glycosyltransferase	unknown	unknown	gnl\|CDD\|224833
NZ_CP040936.1\|WP_139923451.1\|2143519_2144410_-\|glucose-1-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|133015
NZ_CP040936.1\|WP_139923447.1\|2141612_2142164_-\|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl\|CDD\|380337
NZ_CP040936.1\|WP_139923467.1\|2155711_2160589_+\|T9SS-type-B-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|372639

Protein	Function_ID	Function_description	E-value
NZ_CP040936.1\|WP_139923469.1\|2160664_2161636_+\|type-IX-secretion-system-membrane-protein-PorP/SprF	gnl\|CDD\|274625	TIGR03519, bacteroidetes-specific_membrane_protein, type IX secretion system membrane protein, PorP/SprF family. This model describes a protein family unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Flavobacterium johnsoniae, that have type IX secretion systems (T9SS) and exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss a this motility.	7.31015e-77
NZ_CP040936.1\|WP_139923456.1\|2145673_2147077_-\|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase	gnl\|CDD\|274396	TIGR03023, Sugar_transferase., Undecaprenyl-phosphate glucose phosphotransferase. This family of proteins encompasses the E. coli WcaJ protein involved in colanic acid biosynthesis, the Methylobacillus EpsB protein involved in methanolan biosynthesis, as well as the GumD protein involved in the biosynthesis of xanthan. All of these are closely related to the well-characterized WbaP (formerly RfbP) protein, which is the first enzyme in O-antigen biosynthesis in Salmonella typhimurium. The enzyme transfers galactose from UDP-galactose (NOTE: not glucose) to a polyprenyl carrier (utilizing the highly conserved C-terminal sugar transferase domain, pfam02397) a reaction which takes place at the cytoplasmic face of the inner membrane. The N-terminal hydrophobic domain is then believed to facilitate the "flippase" function of transferring the liposaccharide unit from the cytoplasmic face to the periplasmic face of the inner membrane. Most of these genes are found within large operons dedicated to the production of complex exopolysaccharides such as the enterobacterial O-antigen. Colanic acid biosynthesis utilizes a glucose-undecaprenyl carrier, knockout of EpsB abolishes incorporation of UDP-glucose into the lipid phase, and the C-terminal portion of GumD has been shown to be responsible for the glucosyl-1-transferase activity.	6.53983e-140
NZ_CP040936.1\|WP_139926073.1\|2164084_2165275_+\|site-2-protease-family-protein	gnl\|CDD\|100081	cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with additional putative N- and C-terminal transmembrane spanning regions, relative to the core protein, and no PDZ domains.	5.10382e-30
NZ_CP040936.1\|WP_139923463.1\|2152120_2153155_+\|hypothetical-protein	gnl\|CDD\|223267	COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis].	2.89298e-12
NZ_CP040936.1\|WP_139923465.1\|2153158_2154184_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274923	TIGR04021, LLM_DMSO2_sfnG, dimethyl sulfone monooxygenase SfnG. This family of FMNH2-dependent members of the luciferase-like monooxygenase (LLM) family includes SfnG, a monooxygenase that converts dimethylsulphone (DMSO2) to methanesulphonate. This step can be followed immediately by methanesulfonate sulfonatase (an alkanesulfonate monooxygenase - see TIGR03565) for the FMNH2-dependent conversion an inorganic form. [Central intermediary metabolism, Sulfur metabolism].	2.22173e-77
NZ_CP040936.1\|WP_139923442.1\|2138719_2140060_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|378005	pfam08484, Methyltransf_14, C-methyltransferase C-terminal domain. This domain is found in bacterial C-methyltransferase proteins. This domain is found C-terminal to methyltransferase domains such as pfam08241 or pfam08242. But this domain is not a methyltransferase.	3.53381e-97
NZ_CP040936.1\|WP_139923449.1\|2142220_2143312_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|212494	cd08946, SDR_e, extended (e) SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.31621e-45
NZ_CP040936.1\|WP_139926072.1\|2154342_2155203_-\|carbohydrate-kinase	gnl\|CDD\|238572	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.	1.64968e-69
NZ_CP040936.1\|WP_139923459.1\|2147354_2149277_-\|gliding-motility-associated-C-terminal-domain-containing-protein	gnl\|CDD\|372639	pfam13585, CHU_C, C-terminal domain of CHU protein family. The function of this C-terminal domain is not known; there are several conserved tryptophan and asparagine residues.	2.75833e-19
NZ_CP040936.1\|WP_139923445.1\|2140110_2141460_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|226576	COG4091, COG4091, Predicted homoserine dehydrogenase [Amino acid transport and metabolism].	2.26194e-159
NZ_CP040936.1\|WP_139923440.1\|2137696_2138533_-\|glucose-1-phosphate-cytidylyltransferase	gnl\|CDD\|133015	cd02524, G1P_cytidylyltransferase, G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose. Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.	3.62672e-123
NZ_CP040936.1\|WP_139923475.1\|2163387_2164044_+\|HAD-IA-family-hydrolase	gnl\|CDD\|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	5.98023e-42
NZ_CP040936.1\|WP_139923438.1\|2137061_2137703_-\|PIG-L-family-deacetylase	gnl\|CDD\|225031	COG2120, COG2120, Uncharacterized proteins, LmbE homologs [Function unknown].	8.15185e-20
NZ_CP040936.1\|WP_139923453.1\|2144660_2145443_-\|WecB/TagA/CpsF-family-glycosyltransferase	gnl\|CDD\|224833	COG1922, WecG, Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane].	7.32339e-67
NZ_CP040936.1\|WP_139923451.1\|2143519_2144410_-\|glucose-1-phosphate-cytidylyltransferase	gnl\|CDD\|133015	cd02524, G1P_cytidylyltransferase, G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose. Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.	6.80363e-167
NZ_CP040936.1\|WP_139923447.1\|2141612_2142164_-\|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl\|CDD\|380337	cd00438, cupin_RmlC, RmlC carbohydrate epimerase, involved in dTDP-L-rhamnose production. RmlC (deoxythymidine diphosphate (dTDP)-4-keto-6-deoxy-D-hexulose 3, 5-epimerase or dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase; also known as RfbC) is a carbohydrate epimerase involved in the production of dTDP-L-rhamnose, a precursor of the bacterial cell wall constituent, L-rhamnose. L-Rhamnose (6-deoxy-l-mannose) plays an important role in the cell-wall structure of many bacterial species. It has been found to contribute to the virulence of several species, including the Gram-negative Salmonella enterica and Vibrio cholerae, where it is present as a part of the O-antigen, and is essential for the growth of Gram-positive bacteria such as Streptococcus pyogenes. RmlC converts dTDP-6-deoxy-D-xylo-4-hexulose to dTDP-6-deoxy-L-xylo-hexulose by catalyzing the epimerization of the 5-methyl and 3-hydroxyl groups of hexulose, the third of four steps in the dTDP-L-rhamnose biosynthetic pathway. RmlC belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.31717e-98
NZ_CP040936.1\|WP_139923467.1\|2155711_2160589_+\|T9SS-type-B-sorting-domain-containing-protein	gnl\|CDD\|372639	pfam13585, CHU_C, C-terminal domain of CHU protein family. The function of this C-terminal domain is not known; there are several conserved tryptophan and asparagine residues.	4.50693e-34

>NZ_CP040936.1|WP_139923459.1|2147354_2149277_-|gliding-motility-associated-C-terminal-domain-containing-protein
MDRTRTLFFRLGQQWLWLLLVAALNLVAPAAQATHIVGGELDLQYRSGSTYALTLTLYFDAINGSPGALDQTMRAGIFERGSNLRMQNVMLPLTSNTFVNYSNPVCTSPVLSTRKLIYTTNITLPTATYASPGGYYVAVERCCRNQGVSNILNSLSAAQAFYLEFPAVVRDGQRFLDSTPRIFPALGDYVCRGELFTYDFGGQDPDGDSLAYDMVTPLNGHAGSGNSSNPLQAAPAPYAPVAWAPGLSAQNQIPGSPSLGIDARTGRLVVRPTQLGLFVFGVRCSEYRQGVKIGETRRDFQLYVLNCPRNTAPSLELRSSAGVPYRPGRDTLRLVVGADHCMQARFTDPDAGSRLTVELRPVNFTAPVPTFAAAASGVVRTPTDTLITRFCFSECLNSGGRVFLLDVIVADDGCSLPKRDTVRVAFTAVPPPDAPPVLTTTFPPVPAAPAAPPVTIRVPLGTTYTADLAGFDADTDPLALTATGQGFELAAVGMRFTAQNGRGQATGAFQWQAACTAQQFPDLVVTFRLQESAVCNNLAQVRTVRFELAPPIDTVAFRPPNIITPNHDGKNDVFTLPDLPPDLCDGRFAGIAIYSRWGAKVYHSDSRSFRWEGNGLAGTYYYLVTYTDGRRYKGWLQVTP
>NZ_CP040936.1|WP_139923456.1|2145673_2147077_-|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase
MERYRHYSDTSRFILPAVDVLLIFAAFRLAGYLFLGNWYFGGYYPFFYAIFALLWWILSGQFANLYRTDRLITYPEKLLYLMRTFLLHAGVVLLGVVALHMYWLPARYLFSAYSFSVTAVVAGRFLITFFYRAYHKHLARPHSRFVIVGAGASGQELYRFLESHDPIANQFMGFFADSTEPVPAGIRPLVRGRLSELKEYCLRTQVDEIYFAMPLDRRQLIEDLSRFADDHFLSFRIVPDFRGTVRKDVNVYFYDHLPILTIRHAPLGIRTNQVLKRLFDIAFSLLVIVGVFPVVLTLLALLIKLDSPGPVFFKQMRPGKRNQLFPCYKLRTMRQGHGQTELQATKGDRRVTRVGYYLRKYNLDELPQFFNVLLGHMSVVGPRPNMISQLEEYSKHIRTYQMRHAVTPGITGYAQVNGFRGETREAGTMEKRVEYDLKYVENWSFGLDMKIIGLTVWNMVKGEKNAY
>NZ_CP040936.1|WP_139923453.1|2144660_2145443_-|WecB/TagA/CpsF-family-glycosyltransferase
MLPKLPVLDSWISTGSVADFVATILKLGAARASAYVCFANVHMVVEAQHDAQFRQILREAALVAPDGSPVAAAVHWLNPRSAPQARVAGMDLLPVLLEAAARSGQSVYFYGTTNEVLTAMVARARRELPTLRIAGTHSPPFRALTPEEDAAEVAAINAADPDLLFVALGCPRQEKWMAAHQGRIRACMLGVGQAFPVYAGLERRLPLWARRLWLEWAYRLWLEPRRLWRRYLVTNTRFVYLLTRRTLANLAGRPVAQSAA
>NZ_CP040936.1|WP_139923451.1|2143519_2144410_-|glucose-1-phosphate-cytidylyltransferase
MKAVILAGGYGTRISEESGVRPKPMVEIGGRPILWHIMKIYAHHGIRDFVICCGYKGHLIKQYFSDYFLHNSDVTFRMDRNEMQIHRNHAEPWTVTLVDTGQETMTGGRLRRVREYVENETFCLTYGDGVGDVDIREAVRYHRQQGALATLTAVRQPGRFGVFNLQDSSSLVSSFTEKPEGGETPWINGGFFVLEPAIFDYIDGDDTVWEKAPLERLAAEGRLAAFRHTGFWQPMDTLRDKNMLEEMWQQGRAQWKVWSNAPESAEPDPVLADILASPVVAPLSQRVAAPTIMPAD
>NZ_CP040936.1|WP_139923449.1|2142220_2143312_-|NAD-dependent-epimerase/dehydratase-family-protein
MRILITGNMGYVGPGVVRHLRQQFPQAELIGYDMGYFAHCLTGARRLPESRLDRQIFGDIRHLPEGLLEGVDAVVNLAAISNDPMGQTYEQVTLDVNYLAGIELARKAKAAGVGSFVFASSCSMYGAGGEGAKTEASDLNPLTAYARSKVLTEQALRPLADDHFVVTCLRFATACGWSDRLRLDLVVNDFVAGAVAAGEISILSDGTPWRPLIHVQDMARAIAWALGRTPEVGGSFLAINTGSEQWNYQVRELAYAVAESLPGTRVSLNPAAPPDKRSYRVDFSLYRELAPDHQPRRTLADTIDELRDGLLGMNFRDAAFRSSELMRLRVLTSLREAHELADDLGWARAASARVVAAPAATIA
>NZ_CP040936.1|WP_139923447.1|2141612_2142164_-|dTDP-4-dehydrorhamnose-3,5-epimerase
MIFTETELPGAFIIDVDRMADERGFFARSWCADEFEAHGILMPPLQANVSSNPQRGTLRGMHLQLPPHEETKLVRCTRGAIYDVIVDLREESPTYGQWLGVELTADSFRMLFVPGRFAHGFITLQDNTDVCYQVSAKYAPGFERGLRWNDPAIGIKWPLEPTLISEKDQRHPDFELRVPVPIE
>NZ_CP040936.1|WP_139923445.1|2140110_2141460_-|Gfo/Idh/MocA-family-oxidoreductase
MLIIDTALQQRQREGRPIRVGMIGAGFMARGVARQICCYVPGMELVAIANRTPDKARAIYAEAGVTDVTEVGTVAQLEACVAQGRPAITDDALLLSRAAGIEAIIEVTGAVEHGARVVLEAIRHGKHIILLNAELDGTVGPILKVYADRAGVVYTVADGDQPGVTLNLARFVKGLGVTPVLCGNIKGLHDPYRNPTTQEGFARQWGQNPSMVTSFADGSKISFEQAVVANALGMRVARRGMLGPTVEPGTPITKAAEWYPHELLLGGGPGIVDYVVGAEPGPGVFVLGTIDDPVQQHYLKLYKLGPGPLYCFYTPYHLCHFETPTTVARAVLFQDAALAPAGPMCVEVVTAAKVPLLAGQVLDGIGHYHTYGLAENADVAERENLLPIGVAEGCILRHDIPKDQVLTYHDVIVPEGRLIDQLRREQAAYFRPQSQLLTPAAAVAASSVV
>NZ_CP040936.1|WP_139923442.1|2138719_2140060_-|methyltransferase-domain-containing-protein
MEHLSSLVSAPPLPATCPSVGAADAPFLLPEPVEPPASPCRFCGAPLDYTFVNLGTSPLCQNHVRPHEFNRAEAFYPLHARVCRSCFLVQLDEFVTSEEIFQNDYAYFSSYSASWLRHARRYTDMATERFGLGSNSLVVEVASNDGYLLQYFVEKRIPVLGIEPAANVAGHAQAKGINTLVRFFGSETARYVAELSGQADLLLGNNVLAHVPDINDFVAGMRILLKPSGVITMEFPHLLRLMEGNQFDTIYHEHFSYLSFYTVERIFAHHGLTLFDVEELPTHGGSLRIFARHAANLGRPVTERVVALRHRELEAGITDLACYSDFEEKAKETKRKLLEFLIEARREGKTVVGYGAPGKGNTLLNYCGIRTDFLEYTVDVSPHKQGNFLPGTRIPICHPDRIRQTRPDYVLILPWNLREEIMEQMQDIRSWGGRFVVPIPEVQVYE
>NZ_CP040936.1|WP_139923440.1|2137696_2138533_-|glucose-1-phosphate-cytidylyltransferase
MKVVLFCGGLGMRLREFSENTPKPMVPLGYRPMIWHIMRYYAHFGHKDFILCLGYKADMVKQYFMTYNECLSNDFVYSKGGRQVKLLNSDIDDWNITFVDTGLTSNIGQRLRAVQPFLEGEEMFLANYANGLTDLDLNQMISRFAATDAVGSFMAYQPQQSFHVVSLADDDRVNYISPIAKSGLWINAGYFVLRPEVFSYMAAGEELVEEPFQRLIQEGRLRAHRHAGFWTAMDTFKDKQTLDELCARGHAPWELWRTSTDPGQPLRLRAEALLRAVC
>NZ_CP040936.1|WP_139923438.1|2137061_2137703_-|PIG-L-family-deacetylase
MLSLAPGANLRLLCLGAHSDDIEIGAGGTVLRWLQQGRVAAVRWVVWAATDERAREAEHSATLFLRAAPPGSAEVTVHRFPDGSLLAERAAIKAEYEKLKTFEPTVILTHYQHDLHQDHRLVSELTWNTFRSHLILEYEIPKYDGDLGNPAAFVELPPEVLSQKLALLREGFPTQAAKHWYDDETFRALPRLRGIQSATRYAEAFYVRKLLIG
>NZ_CP040936.1|WP_139923463.1|2152120_2153155_+|hypothetical-protein
MSQPSKPIGIYFEHPEWFKPLFAELDRRGLPYEKIDAAHHLFDPAETESRYSLVVNRMSSSAYLRGHGQGIFHTAGYATHLERIGTRIINGSAATAIETNKARQLSLFASLGLKFPKSFVINHASRVPDAARQLQFPIVVKVNIGGSGAGIIRFDTMEGVEAAVAAGQIDLGIDQTALVQEYVAPRGGHIHRVETLNGKFLYAMKVYTTGESFNLCPAEICQIPEEPAAGDFCLTEAPKKGIQVEAFTPPAEVVEAVERIVAAAKIDVGGIEYLVDDRTGDVLFYDVNALSNFVADAVNVVGFDPYARFVDYLETQIGASNPGSQPVAADAVSSTQQPVAASIH
>NZ_CP040936.1|WP_139923465.1|2153158_2154184_+|LLM-class-flavin-dependent-oxidoreductase
MRYGYWMPVFGGWLRNVEDENMRADWDYVKTLAQRSEDLGYDLSLIAELNLNDIKGEEAPSLDAWSTAAALAAVTKKIELMVAVRPTFHSPALLAKQAANIDHISGGRISLNVVSSWWQDEAKKYGVHFEQHDDRYARTAEWLHVVDNLWKQDHFTFEGKFYKVTDSILQPKPVSRPRPFIYAGGESEAAKNLIAAQCDGYVMHGDEPQAIGRRIRDLQERRDRLGLPPMKFGVAAYSIVRNTEAEVKKELERITNVQGSAAGYKNYQQWLAGTQLENQVSLQDYSVSNRGLRSGLTGTPQQVADRIGEFEAVGVDLFLLQCSPQLEEMERFSEAVIQVLA
>NZ_CP040936.1|WP_139926072.1|2154342_2155203_-|carbohydrate-kinase
MLWDVLPGGRQPGGAPLNVAVHLRQLGCSADLISCVGEDEPGTELLRFIQSRGLDTTFIQRSKHYATGRVTAHVDAAQEVTYQIDQPVAWDYIRPGAAPEQRADQAEALVFGSLAARQPDSRQTLRLLLERARLKVFDVNLRPPHYTRAVVTELLAQANLLKLNHHELAEIMAWFGKEPELPAAMQWLTENFGLQAVCVTCGAAGALLWTGNHLYRAPGVPVAVKDPIGSGDAFLAALLKGWLAGTHPEQALRLACATGALVATHPGATPAFTEHDVQALMARQAV
>NZ_CP040936.1|WP_139923467.1|2155711_2160589_+|T9SS-type-B-sorting-domain-containing-protein
MRAELPHSTRTSFLCLTQPRRPAGRAGAAASRLLSLLLLLLLSGAATTTFGQAPPPPPPECAADEKFANTWYFGFKAGLDFNQASADSLPKVLTNGAMDAPAGSGVMSDANGEILFYSNGETVWNGDGSVMTNGTGLAGSRFTTDGPLPIKLPGKPIAGQPTRYLLFTLKDTVGLSYSEIEIPEGGGPGTVIAATKNTPLARGTAEKLTAVFHKNGCDIWVIAHGWGTAKGGNNNRGDAFLAYRVRQSAGYVGPVLIDEPIISTVGSLHAPSVAALGYKGQMKVTPNGQQLALARYSEVVGDSSSTVELFGFDTGSGQVSVNPQVPYIVDSGAGKYYGVGFSPGSYLYATVRNPPKLLQFDISGRGPVTKEDIPLKQKTPADLGSLQAAPDGKIYVARDNQPALGVIPYPDSLGAKSRYADDSLQLGGRLSGLGLVNFNQSSLLRVGPIAQITGCRQISFTAPPIEFDNKKYLWTFGDGATSTEENPVHIYARPGNYTITLRIDTDCFCRQSSGIIQVPDLPEPGSVAGPQVLCAGAAPAALTSTTGASSDADLPLVYQWQTSTDNSNWTDIPGETAATYQPGNSLPAGVTYFRRRALLLLPNQTGPYCTPTFTASVAITVLPALTPGGIAAAQTVCAGSPVAPLTSTAPATGGTGTFAYQWEASVDGGATWTAIPNATSETFAPGLLAVTTSFRRQVTSGACTTTPSNTVTITVVPALTAGTIAASQTICAGSIPAPLTSETAATGGSGAIAYQWESSVDNATWTPIGGATGPNFEPGQLSVTTSFRRRATSGSGCAPVLSNVVTITVTPALVAGTIAASQTVCPGATPAALTSTAPATGGTGTFAYQWESSPDINVWTVIAGATAETFAPGPLTTTTYFRRRVTSGPCAATLSNVVNITVLPTLTPGRIANDQTICAGATPAPLTGPASPEGGTGSYAYQWESSPDNTTWTAVGGATGATFVPGPLTATTFFRRRVVSGDCGPVYSNAVTITVVPTLTAGSIAANQTVCTGGTPALLTSTTLAAGGSGAIDYQWEASPDNVTWTTIPGATASTFAPTPLAATTYFRRRATSGPCGPVYSNVVTITVAPALSAGVVGPAQTVCPGTTPAPLTSTTPPTGGTGSYTYQWESSLDNSTWTLIGGATAETFAPGPVSVTTYFRRRVTSGPCGPEVTASVAVTVLPELLAGTIGTDQDICSGATPAPLGGGGASGGTGTFTYQWEASTDNSTWTAISGATNPGFAPGPLTTTTFFRRRVTSGTGTCATAVSNVVAVRVTPLVTPTVTLAPAPVQCPGTPLTFTAVATNVGANPTFRWLVNNVFVASGPTFTSSTLVTGDQVRVEVTPTVGLCSTGPATASVTVTRTPTSLPTLTIAVQPGGPVCLGAPLTFSLTNVNGAGPAPEYQWQVNGTDVPGATGPVFTSTTLQAGQVVTLRLRTTNICAQPVTAVSNGVPVRIQPPVDVDAGPDREILAGTSITLEGRADGRYPVRWTPAAGLRFTGDSLRPVATPRVTTTYTLSAGAGGCADSDQVTITVRPAIRIPNAFTPNSDGRDDTWQIENIEQFPDNTVTVFNRWGNQIFSATNYSRANEWRGDINGKPAPVGTYYYVVVTKGPLGKSYSGSITILY
>NZ_CP040936.1|WP_139923469.1|2160664_2161636_+|type-IX-secretion-system-membrane-protein-PorP/SprF
MKRALTLLLLPLLLLAAAPLRAQQQAQYSQYMNNNYILNPGTTGVEDYIDVKTSYRTQWTGLEGAPKTYYLSASSSLGKWRSTGKRTLRDRRRPFHAIGGLIYNDVTGPTSRKGAYLSYAYNLVLAPNLRAALGVSAGMQQFAVDGQQLRFYDTTFQAGSAASRVLDGSIGLWVYSSDFYVGISGAQLLGNKLDFSYSPDGVGAGAGNTLKRHYFATAGVRVPLSDDWSLVPSVLLKAVNPAPLSLDLNAKLKYQDLLWGGVSWRAFDSFVAMVGLNYEQLTLGYSYDAGLSRLAGYHGGSHEVLLGLRLKKKAQVVCTNRFW
>NZ_CP040936.1|WP_139923471.1|2161639_2161879_+|hypothetical-protein
MPPALPHPYGAKVLQGIVSTLFGGIIWDALALPLSLNLEGPTFKQLRKLGRTLLIEVKGPSLPASKHQLTEGEAKFKIE
>NZ_CP040936.1|WP_139923473.1|2162258_2162606_-|hypothetical-protein
MKKLFYVVGCLLMLSSSQAFAQAKSDVIVVRMLEREKSIRLAISRGDAPVELIEIENGGSDKNFSAGAKGLQQVLAKLYAEGYVVQSSLAGAPLIGFSTQGAQINTLILAKTPKP
>NZ_CP040936.1|WP_139923475.1|2163387_2164044_+|HAD-IA-family-hydrolase
MPTKLPNLLFDFGGVIINIDYNLTREAMRRHGSSIEFTQAAQAELFDLMETGRLTPEEFRKGLREHYQLTATDAELDAAWNAMLLDVPAERLALIAELRAQGHQTALLSNTNQIHIEEINRRLRKQYGFGHGIADCLDRVFYSQEVGWRKPGEEIFRHALEQMNWKAEETLFIEDSPQHIETARRLGLRTLFLTPPLTLQDALPAALRAFPREYSAPV
>NZ_CP040936.1|WP_139926073.1|2164084_2165275_+|site-2-protease-family-protein
MPPAEDDDVEAAFTRYERPALPRWARYSLHLLLLLLTLVTTTFEGLVLVAGALGQAYAPYELLAGPWQNLWPAVQPGLWYAVPFLGVLLVHEFGHYFTARYYRIRATLPYFIPLPMGFGTFGAVIRIKDRIFSRREFFDVGLAGPLAGFIVAVGVLAYGLTHLPPLDYLYNIHPEYRFYGSRYAQYVYQAGQGAGTVLAQPLLFRAMAATLADPALLPHPNELVHYPLLVAGILSLFFTALNLLPIGQLDGGHIVYGLLGPRRAARVSVVLFVGFIFYAGLGLFSLASDETTWLYWAGPYAVYLFLVFRRVVPTVRRALLLGGAVWLAQVALASAFPGLEGNPGWLVFGLVLARLTGIFHPPAPDERPLSAGRKVLGWLMLVIFVLCFTPFPLTFR
>NZ_CP040936.1|WP_139923477.1|2165319_2165961_+|hypothetical-protein
MTVPQFSQYQFLRGSTQLLLRQHGLHVSQRGWRGATWLETEIPYEELLPVELEYASPSPLHIEPFLIVAWLIAQAALHLTHNQKDTATLLVGGLGFVLGLGVVVLLRRRRTRTVTLATNRIRIVLRNRRSQHEALATFTTELRQRAHGYLREEYAQINPLGPIELQLHRLRWLHQLRVLSAEELQTLSTRLTGRLSLAPLNLMGQELETPYVN

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Crispr_ID: NZ_CP040936_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040936_2

2150394-2150641

Orphan

Consensus_repeat	Method
GCGGCGTTGTTGTTGCCGGTTTG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP040936_2

>merge|NZ_CP040936|2|2150394-2150641|CRISPRCasFinder
GCGGCGTTGTTGTTGCCGGTTTGGGTAGCGCTGGCGGCCACGGCCCCGAAAGCCCCGGAGTGACTCTGGGTTTGGTCGGCGGCGTTGTTGTTGCCGGTCTGCTGAATGAAAGCGGCAGAAGACGCACCTCCCTGGCTAAGCTGCGACTGAGTAGCCGCGTTGTTATTGCCCTGCTGCCCGATGGTGGCGGTCATGTAGCTGCCGGCGTTTTGCTGCTGTTGGCCGGCCGAGTTATTGTTGCCTTGCTG

>NZ_CP040936|2|2|2150394-2150641|CRISPRCasFinder
GCGGCGTTGTTGTTGCCGGTTTG	GGTAGCGCTGGCGGCCACGGCCCCGAAAGCCCCGGAGTGACTCTGGGTTTGGTCG
GCGGCGTTGTTGTTGCCGGTCTG	CTGAATGAAAGCGGCAGAAGACGCACCTCCCTGGCTAAGCTGCGACTGAGTA
GCCGCGTTGTTATTGCCCTGCTG	CCCGATGGTGGCGGTCATGTAGCTGCCGGCGTTTTGCTGCTGTTGGCCG
GCCGAGTTATTGTTGCCTTGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040936.1\|WP_139923469.1\|2160664_2161636_+\|type-IX-secretion-system-membrane-protein-PorP/SprF	unknown	unknown	gnl\|CDD\|274625
NZ_CP040936.1\|WP_139923473.1\|2162258_2162606_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040936.1\|WP_139923477.1\|2165319_2165961_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040936.1\|WP_139923456.1\|2145673_2147077_-\|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase	unknown	unknown	gnl\|CDD\|274396
NZ_CP040936.1\|WP_139926073.1\|2164084_2165275_+\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100081
NZ_CP040936.1\|WP_139923463.1\|2152120_2153155_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223267
NZ_CP040936.1\|WP_139923471.1\|2161639_2161879_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040936.1\|WP_139923465.1\|2153158_2154184_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274923
NZ_CP040936.1\|WP_139923442.1\|2138719_2140060_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|378005
NZ_CP040936.1\|WP_139923449.1\|2142220_2143312_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|212494
NZ_CP040936.1\|WP_139926072.1\|2154342_2155203_-\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|238572
NZ_CP040936.1\|WP_139923459.1\|2147354_2149277_-\|gliding-motility-associated-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|372639
NZ_CP040936.1\|WP_139923445.1\|2140110_2141460_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|226576
NZ_CP040936.1\|WP_139923440.1\|2137696_2138533_-\|glucose-1-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|133015
NZ_CP040936.1\|WP_139923475.1\|2163387_2164044_+\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|319790
NZ_CP040936.1\|WP_139923438.1\|2137061_2137703_-\|PIG-L-family-deacetylase	unknown	unknown	gnl\|CDD\|225031
NZ_CP040936.1\|WP_139923453.1\|2144660_2145443_-\|WecB/TagA/CpsF-family-glycosyltransferase	unknown	unknown	gnl\|CDD\|224833
NZ_CP040936.1\|WP_139923451.1\|2143519_2144410_-\|glucose-1-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|133015
NZ_CP040936.1\|WP_139923447.1\|2141612_2142164_-\|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl\|CDD\|380337
NZ_CP040936.1\|WP_139923467.1\|2155711_2160589_+\|T9SS-type-B-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|372639

Protein	Function_ID	Function_description	E-value
NZ_CP040936.1\|WP_139923469.1\|2160664_2161636_+\|type-IX-secretion-system-membrane-protein-PorP/SprF	gnl\|CDD\|274625	TIGR03519, bacteroidetes-specific_membrane_protein, type IX secretion system membrane protein, PorP/SprF family. This model describes a protein family unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Flavobacterium johnsoniae, that have type IX secretion systems (T9SS) and exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss a this motility.	7.31015e-77
NZ_CP040936.1\|WP_139923456.1\|2145673_2147077_-\|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase	gnl\|CDD\|274396	TIGR03023, Sugar_transferase., Undecaprenyl-phosphate glucose phosphotransferase. This family of proteins encompasses the E. coli WcaJ protein involved in colanic acid biosynthesis, the Methylobacillus EpsB protein involved in methanolan biosynthesis, as well as the GumD protein involved in the biosynthesis of xanthan. All of these are closely related to the well-characterized WbaP (formerly RfbP) protein, which is the first enzyme in O-antigen biosynthesis in Salmonella typhimurium. The enzyme transfers galactose from UDP-galactose (NOTE: not glucose) to a polyprenyl carrier (utilizing the highly conserved C-terminal sugar transferase domain, pfam02397) a reaction which takes place at the cytoplasmic face of the inner membrane. The N-terminal hydrophobic domain is then believed to facilitate the "flippase" function of transferring the liposaccharide unit from the cytoplasmic face to the periplasmic face of the inner membrane. Most of these genes are found within large operons dedicated to the production of complex exopolysaccharides such as the enterobacterial O-antigen. Colanic acid biosynthesis utilizes a glucose-undecaprenyl carrier, knockout of EpsB abolishes incorporation of UDP-glucose into the lipid phase, and the C-terminal portion of GumD has been shown to be responsible for the glucosyl-1-transferase activity.	6.53983e-140
NZ_CP040936.1\|WP_139926073.1\|2164084_2165275_+\|site-2-protease-family-protein	gnl\|CDD\|100081	cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with additional putative N- and C-terminal transmembrane spanning regions, relative to the core protein, and no PDZ domains.	5.10382e-30
NZ_CP040936.1\|WP_139923463.1\|2152120_2153155_+\|hypothetical-protein	gnl\|CDD\|223267	COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis].	2.89298e-12
NZ_CP040936.1\|WP_139923465.1\|2153158_2154184_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274923	TIGR04021, LLM_DMSO2_sfnG, dimethyl sulfone monooxygenase SfnG. This family of FMNH2-dependent members of the luciferase-like monooxygenase (LLM) family includes SfnG, a monooxygenase that converts dimethylsulphone (DMSO2) to methanesulphonate. This step can be followed immediately by methanesulfonate sulfonatase (an alkanesulfonate monooxygenase - see TIGR03565) for the FMNH2-dependent conversion an inorganic form. [Central intermediary metabolism, Sulfur metabolism].	2.22173e-77
NZ_CP040936.1\|WP_139923442.1\|2138719_2140060_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|378005	pfam08484, Methyltransf_14, C-methyltransferase C-terminal domain. This domain is found in bacterial C-methyltransferase proteins. This domain is found C-terminal to methyltransferase domains such as pfam08241 or pfam08242. But this domain is not a methyltransferase.	3.53381e-97
NZ_CP040936.1\|WP_139923449.1\|2142220_2143312_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|212494	cd08946, SDR_e, extended (e) SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.31621e-45
NZ_CP040936.1\|WP_139926072.1\|2154342_2155203_-\|carbohydrate-kinase	gnl\|CDD\|238572	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.	1.64968e-69
NZ_CP040936.1\|WP_139923459.1\|2147354_2149277_-\|gliding-motility-associated-C-terminal-domain-containing-protein	gnl\|CDD\|372639	pfam13585, CHU_C, C-terminal domain of CHU protein family. The function of this C-terminal domain is not known; there are several conserved tryptophan and asparagine residues.	2.75833e-19
NZ_CP040936.1\|WP_139923445.1\|2140110_2141460_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|226576	COG4091, COG4091, Predicted homoserine dehydrogenase [Amino acid transport and metabolism].	2.26194e-159
NZ_CP040936.1\|WP_139923440.1\|2137696_2138533_-\|glucose-1-phosphate-cytidylyltransferase	gnl\|CDD\|133015	cd02524, G1P_cytidylyltransferase, G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose. Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.	3.62672e-123
NZ_CP040936.1\|WP_139923475.1\|2163387_2164044_+\|HAD-IA-family-hydrolase	gnl\|CDD\|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	5.98023e-42
NZ_CP040936.1\|WP_139923438.1\|2137061_2137703_-\|PIG-L-family-deacetylase	gnl\|CDD\|225031	COG2120, COG2120, Uncharacterized proteins, LmbE homologs [Function unknown].	8.15185e-20
NZ_CP040936.1\|WP_139923453.1\|2144660_2145443_-\|WecB/TagA/CpsF-family-glycosyltransferase	gnl\|CDD\|224833	COG1922, WecG, Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane].	7.32339e-67
NZ_CP040936.1\|WP_139923451.1\|2143519_2144410_-\|glucose-1-phosphate-cytidylyltransferase	gnl\|CDD\|133015	cd02524, G1P_cytidylyltransferase, G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose. Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.	6.80363e-167
NZ_CP040936.1\|WP_139923447.1\|2141612_2142164_-\|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl\|CDD\|380337	cd00438, cupin_RmlC, RmlC carbohydrate epimerase, involved in dTDP-L-rhamnose production. RmlC (deoxythymidine diphosphate (dTDP)-4-keto-6-deoxy-D-hexulose 3, 5-epimerase or dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase; also known as RfbC) is a carbohydrate epimerase involved in the production of dTDP-L-rhamnose, a precursor of the bacterial cell wall constituent, L-rhamnose. L-Rhamnose (6-deoxy-l-mannose) plays an important role in the cell-wall structure of many bacterial species. It has been found to contribute to the virulence of several species, including the Gram-negative Salmonella enterica and Vibrio cholerae, where it is present as a part of the O-antigen, and is essential for the growth of Gram-positive bacteria such as Streptococcus pyogenes. RmlC converts dTDP-6-deoxy-D-xylo-4-hexulose to dTDP-6-deoxy-L-xylo-hexulose by catalyzing the epimerization of the 5-methyl and 3-hydroxyl groups of hexulose, the third of four steps in the dTDP-L-rhamnose biosynthetic pathway. RmlC belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.31717e-98
NZ_CP040936.1\|WP_139923467.1\|2155711_2160589_+\|T9SS-type-B-sorting-domain-containing-protein	gnl\|CDD\|372639	pfam13585, CHU_C, C-terminal domain of CHU protein family. The function of this C-terminal domain is not known; there are several conserved tryptophan and asparagine residues.	4.50693e-34

>NZ_CP040936.1|WP_139923459.1|2147354_2149277_-|gliding-motility-associated-C-terminal-domain-containing-protein
MDRTRTLFFRLGQQWLWLLLVAALNLVAPAAQATHIVGGELDLQYRSGSTYALTLTLYFDAINGSPGALDQTMRAGIFERGSNLRMQNVMLPLTSNTFVNYSNPVCTSPVLSTRKLIYTTNITLPTATYASPGGYYVAVERCCRNQGVSNILNSLSAAQAFYLEFPAVVRDGQRFLDSTPRIFPALGDYVCRGELFTYDFGGQDPDGDSLAYDMVTPLNGHAGSGNSSNPLQAAPAPYAPVAWAPGLSAQNQIPGSPSLGIDARTGRLVVRPTQLGLFVFGVRCSEYRQGVKIGETRRDFQLYVLNCPRNTAPSLELRSSAGVPYRPGRDTLRLVVGADHCMQARFTDPDAGSRLTVELRPVNFTAPVPTFAAAASGVVRTPTDTLITRFCFSECLNSGGRVFLLDVIVADDGCSLPKRDTVRVAFTAVPPPDAPPVLTTTFPPVPAAPAAPPVTIRVPLGTTYTADLAGFDADTDPLALTATGQGFELAAVGMRFTAQNGRGQATGAFQWQAACTAQQFPDLVVTFRLQESAVCNNLAQVRTVRFELAPPIDTVAFRPPNIITPNHDGKNDVFTLPDLPPDLCDGRFAGIAIYSRWGAKVYHSDSRSFRWEGNGLAGTYYYLVTYTDGRRYKGWLQVTP
>NZ_CP040936.1|WP_139923456.1|2145673_2147077_-|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase
MERYRHYSDTSRFILPAVDVLLIFAAFRLAGYLFLGNWYFGGYYPFFYAIFALLWWILSGQFANLYRTDRLITYPEKLLYLMRTFLLHAGVVLLGVVALHMYWLPARYLFSAYSFSVTAVVAGRFLITFFYRAYHKHLARPHSRFVIVGAGASGQELYRFLESHDPIANQFMGFFADSTEPVPAGIRPLVRGRLSELKEYCLRTQVDEIYFAMPLDRRQLIEDLSRFADDHFLSFRIVPDFRGTVRKDVNVYFYDHLPILTIRHAPLGIRTNQVLKRLFDIAFSLLVIVGVFPVVLTLLALLIKLDSPGPVFFKQMRPGKRNQLFPCYKLRTMRQGHGQTELQATKGDRRVTRVGYYLRKYNLDELPQFFNVLLGHMSVVGPRPNMISQLEEYSKHIRTYQMRHAVTPGITGYAQVNGFRGETREAGTMEKRVEYDLKYVENWSFGLDMKIIGLTVWNMVKGEKNAY
>NZ_CP040936.1|WP_139923453.1|2144660_2145443_-|WecB/TagA/CpsF-family-glycosyltransferase
MLPKLPVLDSWISTGSVADFVATILKLGAARASAYVCFANVHMVVEAQHDAQFRQILREAALVAPDGSPVAAAVHWLNPRSAPQARVAGMDLLPVLLEAAARSGQSVYFYGTTNEVLTAMVARARRELPTLRIAGTHSPPFRALTPEEDAAEVAAINAADPDLLFVALGCPRQEKWMAAHQGRIRACMLGVGQAFPVYAGLERRLPLWARRLWLEWAYRLWLEPRRLWRRYLVTNTRFVYLLTRRTLANLAGRPVAQSAA
>NZ_CP040936.1|WP_139923451.1|2143519_2144410_-|glucose-1-phosphate-cytidylyltransferase
MKAVILAGGYGTRISEESGVRPKPMVEIGGRPILWHIMKIYAHHGIRDFVICCGYKGHLIKQYFSDYFLHNSDVTFRMDRNEMQIHRNHAEPWTVTLVDTGQETMTGGRLRRVREYVENETFCLTYGDGVGDVDIREAVRYHRQQGALATLTAVRQPGRFGVFNLQDSSSLVSSFTEKPEGGETPWINGGFFVLEPAIFDYIDGDDTVWEKAPLERLAAEGRLAAFRHTGFWQPMDTLRDKNMLEEMWQQGRAQWKVWSNAPESAEPDPVLADILASPVVAPLSQRVAAPTIMPAD
>NZ_CP040936.1|WP_139923449.1|2142220_2143312_-|NAD-dependent-epimerase/dehydratase-family-protein
MRILITGNMGYVGPGVVRHLRQQFPQAELIGYDMGYFAHCLTGARRLPESRLDRQIFGDIRHLPEGLLEGVDAVVNLAAISNDPMGQTYEQVTLDVNYLAGIELARKAKAAGVGSFVFASSCSMYGAGGEGAKTEASDLNPLTAYARSKVLTEQALRPLADDHFVVTCLRFATACGWSDRLRLDLVVNDFVAGAVAAGEISILSDGTPWRPLIHVQDMARAIAWALGRTPEVGGSFLAINTGSEQWNYQVRELAYAVAESLPGTRVSLNPAAPPDKRSYRVDFSLYRELAPDHQPRRTLADTIDELRDGLLGMNFRDAAFRSSELMRLRVLTSLREAHELADDLGWARAASARVVAAPAATIA
>NZ_CP040936.1|WP_139923447.1|2141612_2142164_-|dTDP-4-dehydrorhamnose-3,5-epimerase
MIFTETELPGAFIIDVDRMADERGFFARSWCADEFEAHGILMPPLQANVSSNPQRGTLRGMHLQLPPHEETKLVRCTRGAIYDVIVDLREESPTYGQWLGVELTADSFRMLFVPGRFAHGFITLQDNTDVCYQVSAKYAPGFERGLRWNDPAIGIKWPLEPTLISEKDQRHPDFELRVPVPIE
>NZ_CP040936.1|WP_139923445.1|2140110_2141460_-|Gfo/Idh/MocA-family-oxidoreductase
MLIIDTALQQRQREGRPIRVGMIGAGFMARGVARQICCYVPGMELVAIANRTPDKARAIYAEAGVTDVTEVGTVAQLEACVAQGRPAITDDALLLSRAAGIEAIIEVTGAVEHGARVVLEAIRHGKHIILLNAELDGTVGPILKVYADRAGVVYTVADGDQPGVTLNLARFVKGLGVTPVLCGNIKGLHDPYRNPTTQEGFARQWGQNPSMVTSFADGSKISFEQAVVANALGMRVARRGMLGPTVEPGTPITKAAEWYPHELLLGGGPGIVDYVVGAEPGPGVFVLGTIDDPVQQHYLKLYKLGPGPLYCFYTPYHLCHFETPTTVARAVLFQDAALAPAGPMCVEVVTAAKVPLLAGQVLDGIGHYHTYGLAENADVAERENLLPIGVAEGCILRHDIPKDQVLTYHDVIVPEGRLIDQLRREQAAYFRPQSQLLTPAAAVAASSVV
>NZ_CP040936.1|WP_139923442.1|2138719_2140060_-|methyltransferase-domain-containing-protein
MEHLSSLVSAPPLPATCPSVGAADAPFLLPEPVEPPASPCRFCGAPLDYTFVNLGTSPLCQNHVRPHEFNRAEAFYPLHARVCRSCFLVQLDEFVTSEEIFQNDYAYFSSYSASWLRHARRYTDMATERFGLGSNSLVVEVASNDGYLLQYFVEKRIPVLGIEPAANVAGHAQAKGINTLVRFFGSETARYVAELSGQADLLLGNNVLAHVPDINDFVAGMRILLKPSGVITMEFPHLLRLMEGNQFDTIYHEHFSYLSFYTVERIFAHHGLTLFDVEELPTHGGSLRIFARHAANLGRPVTERVVALRHRELEAGITDLACYSDFEEKAKETKRKLLEFLIEARREGKTVVGYGAPGKGNTLLNYCGIRTDFLEYTVDVSPHKQGNFLPGTRIPICHPDRIRQTRPDYVLILPWNLREEIMEQMQDIRSWGGRFVVPIPEVQVYE
>NZ_CP040936.1|WP_139923440.1|2137696_2138533_-|glucose-1-phosphate-cytidylyltransferase
MKVVLFCGGLGMRLREFSENTPKPMVPLGYRPMIWHIMRYYAHFGHKDFILCLGYKADMVKQYFMTYNECLSNDFVYSKGGRQVKLLNSDIDDWNITFVDTGLTSNIGQRLRAVQPFLEGEEMFLANYANGLTDLDLNQMISRFAATDAVGSFMAYQPQQSFHVVSLADDDRVNYISPIAKSGLWINAGYFVLRPEVFSYMAAGEELVEEPFQRLIQEGRLRAHRHAGFWTAMDTFKDKQTLDELCARGHAPWELWRTSTDPGQPLRLRAEALLRAVC
>NZ_CP040936.1|WP_139923438.1|2137061_2137703_-|PIG-L-family-deacetylase
MLSLAPGANLRLLCLGAHSDDIEIGAGGTVLRWLQQGRVAAVRWVVWAATDERAREAEHSATLFLRAAPPGSAEVTVHRFPDGSLLAERAAIKAEYEKLKTFEPTVILTHYQHDLHQDHRLVSELTWNTFRSHLILEYEIPKYDGDLGNPAAFVELPPEVLSQKLALLREGFPTQAAKHWYDDETFRALPRLRGIQSATRYAEAFYVRKLLIG
>NZ_CP040936.1|WP_139923463.1|2152120_2153155_+|hypothetical-protein
MSQPSKPIGIYFEHPEWFKPLFAELDRRGLPYEKIDAAHHLFDPAETESRYSLVVNRMSSSAYLRGHGQGIFHTAGYATHLERIGTRIINGSAATAIETNKARQLSLFASLGLKFPKSFVINHASRVPDAARQLQFPIVVKVNIGGSGAGIIRFDTMEGVEAAVAAGQIDLGIDQTALVQEYVAPRGGHIHRVETLNGKFLYAMKVYTTGESFNLCPAEICQIPEEPAAGDFCLTEAPKKGIQVEAFTPPAEVVEAVERIVAAAKIDVGGIEYLVDDRTGDVLFYDVNALSNFVADAVNVVGFDPYARFVDYLETQIGASNPGSQPVAADAVSSTQQPVAASIH
>NZ_CP040936.1|WP_139923465.1|2153158_2154184_+|LLM-class-flavin-dependent-oxidoreductase
MRYGYWMPVFGGWLRNVEDENMRADWDYVKTLAQRSEDLGYDLSLIAELNLNDIKGEEAPSLDAWSTAAALAAVTKKIELMVAVRPTFHSPALLAKQAANIDHISGGRISLNVVSSWWQDEAKKYGVHFEQHDDRYARTAEWLHVVDNLWKQDHFTFEGKFYKVTDSILQPKPVSRPRPFIYAGGESEAAKNLIAAQCDGYVMHGDEPQAIGRRIRDLQERRDRLGLPPMKFGVAAYSIVRNTEAEVKKELERITNVQGSAAGYKNYQQWLAGTQLENQVSLQDYSVSNRGLRSGLTGTPQQVADRIGEFEAVGVDLFLLQCSPQLEEMERFSEAVIQVLA
>NZ_CP040936.1|WP_139926072.1|2154342_2155203_-|carbohydrate-kinase
MLWDVLPGGRQPGGAPLNVAVHLRQLGCSADLISCVGEDEPGTELLRFIQSRGLDTTFIQRSKHYATGRVTAHVDAAQEVTYQIDQPVAWDYIRPGAAPEQRADQAEALVFGSLAARQPDSRQTLRLLLERARLKVFDVNLRPPHYTRAVVTELLAQANLLKLNHHELAEIMAWFGKEPELPAAMQWLTENFGLQAVCVTCGAAGALLWTGNHLYRAPGVPVAVKDPIGSGDAFLAALLKGWLAGTHPEQALRLACATGALVATHPGATPAFTEHDVQALMARQAV
>NZ_CP040936.1|WP_139923467.1|2155711_2160589_+|T9SS-type-B-sorting-domain-containing-protein
MRAELPHSTRTSFLCLTQPRRPAGRAGAAASRLLSLLLLLLLSGAATTTFGQAPPPPPPECAADEKFANTWYFGFKAGLDFNQASADSLPKVLTNGAMDAPAGSGVMSDANGEILFYSNGETVWNGDGSVMTNGTGLAGSRFTTDGPLPIKLPGKPIAGQPTRYLLFTLKDTVGLSYSEIEIPEGGGPGTVIAATKNTPLARGTAEKLTAVFHKNGCDIWVIAHGWGTAKGGNNNRGDAFLAYRVRQSAGYVGPVLIDEPIISTVGSLHAPSVAALGYKGQMKVTPNGQQLALARYSEVVGDSSSTVELFGFDTGSGQVSVNPQVPYIVDSGAGKYYGVGFSPGSYLYATVRNPPKLLQFDISGRGPVTKEDIPLKQKTPADLGSLQAAPDGKIYVARDNQPALGVIPYPDSLGAKSRYADDSLQLGGRLSGLGLVNFNQSSLLRVGPIAQITGCRQISFTAPPIEFDNKKYLWTFGDGATSTEENPVHIYARPGNYTITLRIDTDCFCRQSSGIIQVPDLPEPGSVAGPQVLCAGAAPAALTSTTGASSDADLPLVYQWQTSTDNSNWTDIPGETAATYQPGNSLPAGVTYFRRRALLLLPNQTGPYCTPTFTASVAITVLPALTPGGIAAAQTVCAGSPVAPLTSTAPATGGTGTFAYQWEASVDGGATWTAIPNATSETFAPGLLAVTTSFRRQVTSGACTTTPSNTVTITVVPALTAGTIAASQTICAGSIPAPLTSETAATGGSGAIAYQWESSVDNATWTPIGGATGPNFEPGQLSVTTSFRRRATSGSGCAPVLSNVVTITVTPALVAGTIAASQTVCPGATPAALTSTAPATGGTGTFAYQWESSPDINVWTVIAGATAETFAPGPLTTTTYFRRRVTSGPCAATLSNVVNITVLPTLTPGRIANDQTICAGATPAPLTGPASPEGGTGSYAYQWESSPDNTTWTAVGGATGATFVPGPLTATTFFRRRVVSGDCGPVYSNAVTITVVPTLTAGSIAANQTVCTGGTPALLTSTTLAAGGSGAIDYQWEASPDNVTWTTIPGATASTFAPTPLAATTYFRRRATSGPCGPVYSNVVTITVAPALSAGVVGPAQTVCPGTTPAPLTSTTPPTGGTGSYTYQWESSLDNSTWTLIGGATAETFAPGPVSVTTYFRRRVTSGPCGPEVTASVAVTVLPELLAGTIGTDQDICSGATPAPLGGGGASGGTGTFTYQWEASTDNSTWTAISGATNPGFAPGPLTTTTFFRRRVTSGTGTCATAVSNVVAVRVTPLVTPTVTLAPAPVQCPGTPLTFTAVATNVGANPTFRWLVNNVFVASGPTFTSSTLVTGDQVRVEVTPTVGLCSTGPATASVTVTRTPTSLPTLTIAVQPGGPVCLGAPLTFSLTNVNGAGPAPEYQWQVNGTDVPGATGPVFTSTTLQAGQVVTLRLRTTNICAQPVTAVSNGVPVRIQPPVDVDAGPDREILAGTSITLEGRADGRYPVRWTPAAGLRFTGDSLRPVATPRVTTTYTLSAGAGGCADSDQVTITVRPAIRIPNAFTPNSDGRDDTWQIENIEQFPDNTVTVFNRWGNQIFSATNYSRANEWRGDINGKPAPVGTYYYVVVTKGPLGKSYSGSITILY
>NZ_CP040936.1|WP_139923469.1|2160664_2161636_+|type-IX-secretion-system-membrane-protein-PorP/SprF
MKRALTLLLLPLLLLAAAPLRAQQQAQYSQYMNNNYILNPGTTGVEDYIDVKTSYRTQWTGLEGAPKTYYLSASSSLGKWRSTGKRTLRDRRRPFHAIGGLIYNDVTGPTSRKGAYLSYAYNLVLAPNLRAALGVSAGMQQFAVDGQQLRFYDTTFQAGSAASRVLDGSIGLWVYSSDFYVGISGAQLLGNKLDFSYSPDGVGAGAGNTLKRHYFATAGVRVPLSDDWSLVPSVLLKAVNPAPLSLDLNAKLKYQDLLWGGVSWRAFDSFVAMVGLNYEQLTLGYSYDAGLSRLAGYHGGSHEVLLGLRLKKKAQVVCTNRFW
>NZ_CP040936.1|WP_139923471.1|2161639_2161879_+|hypothetical-protein
MPPALPHPYGAKVLQGIVSTLFGGIIWDALALPLSLNLEGPTFKQLRKLGRTLLIEVKGPSLPASKHQLTEGEAKFKIE
>NZ_CP040936.1|WP_139923473.1|2162258_2162606_-|hypothetical-protein
MKKLFYVVGCLLMLSSSQAFAQAKSDVIVVRMLEREKSIRLAISRGDAPVELIEIENGGSDKNFSAGAKGLQQVLAKLYAEGYVVQSSLAGAPLIGFSTQGAQINTLILAKTPKP
>NZ_CP040936.1|WP_139923475.1|2163387_2164044_+|HAD-IA-family-hydrolase
MPTKLPNLLFDFGGVIINIDYNLTREAMRRHGSSIEFTQAAQAELFDLMETGRLTPEEFRKGLREHYQLTATDAELDAAWNAMLLDVPAERLALIAELRAQGHQTALLSNTNQIHIEEINRRLRKQYGFGHGIADCLDRVFYSQEVGWRKPGEEIFRHALEQMNWKAEETLFIEDSPQHIETARRLGLRTLFLTPPLTLQDALPAALRAFPREYSAPV
>NZ_CP040936.1|WP_139926073.1|2164084_2165275_+|site-2-protease-family-protein
MPPAEDDDVEAAFTRYERPALPRWARYSLHLLLLLLTLVTTTFEGLVLVAGALGQAYAPYELLAGPWQNLWPAVQPGLWYAVPFLGVLLVHEFGHYFTARYYRIRATLPYFIPLPMGFGTFGAVIRIKDRIFSRREFFDVGLAGPLAGFIVAVGVLAYGLTHLPPLDYLYNIHPEYRFYGSRYAQYVYQAGQGAGTVLAQPLLFRAMAATLADPALLPHPNELVHYPLLVAGILSLFFTALNLLPIGQLDGGHIVYGLLGPRRAARVSVVLFVGFIFYAGLGLFSLASDETTWLYWAGPYAVYLFLVFRRVVPTVRRALLLGGAVWLAQVALASAFPGLEGNPGWLVFGLVLARLTGIFHPPAPDERPLSAGRKVLGWLMLVIFVLCFTPFPLTFR
>NZ_CP040936.1|WP_139923477.1|2165319_2165961_+|hypothetical-protein
MTVPQFSQYQFLRGSTQLLLRQHGLHVSQRGWRGATWLETEIPYEELLPVELEYASPSPLHIEPFLIVAWLIAQAALHLTHNQKDTATLLVGGLGFVLGLGVVVLLRRRRTRTVTLATNRIRIVLRNRRSQHEALATFTTELRQRAHGYLREEYAQINPLGPIELQLHRLRWLHQLRVLSAEELQTLSTRLTGRLSLAPLNLMGQELETPYVN

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Crispr_ID: NZ_CP040936_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040936_3

3596467-3596558

Orphan

Consensus_repeat	Method
GTACGGACTAAAGTCCGTGCTACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040936_3

>merge|NZ_CP040936|3|3596467-3596558|CRISPRCasFinder
GTACGGACTAAAGTCCGTGCTACAGGGCTCGGTTCCGTCCGGTGCCGTGCTTCTGGGCACCGGGCGTGTACGGACTAAAGTCCGTGCTACAG

>NZ_CP040936|3|3|3596467-3596558|CRISPRCasFinder
GTACGGACTAAAGTCCGTGCTACAG	GGCTCGGTTCCGTCCGGTGCCGTGCTTCTGGGCACCGGGCGT
GTACGGACTAAAGTCCGTGCTACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040936.1\|WP_139925078.1\|3600053_3600536_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040936.1\|WP_139925073.1\|3589711_3593113_-\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235681
NZ_CP040936.1\|WP_139925070.1\|3585404_3587399_-\|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP040936.1\|WP_139925082.1\|3605146_3607012_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362
NZ_CP040936.1\|WP_139925079.1\|3600590_3601082_-\|DUF4385-family-protein	unknown	unknown	gnl\|CDD\|373016
NZ_CP040936.1\|WP_139925081.1\|3604047_3604956_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|372616
NZ_CP040936.1\|WP_139925074.1\|3593280_3595722_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|223964
NZ_CP040936.1\|WP_110976090.1\|3608872_3609331_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379279
NZ_CP040936.1\|WP_139925083.1\|3609380_3612803_-\|DUF4175-family-protein	unknown	unknown	gnl\|CDD\|372724
NZ_CP040936.1\|WP_139925067.1\|3581283_3581778_+\|TonB-family-protein	unknown	unknown	gnl\|CDD\|367555
NZ_CP040936.1\|WP_139925080.1\|3602171_3603797_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379073
NZ_CP040936.1\|WP_139925066.1\|3580119_3581091_-\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|376322
NZ_CP040936.1\|WP_139925075.1\|3595958_3596360_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040936.1\|WP_139925071.1\|3587619_3588606_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381312
NZ_CP040936.1\|WP_139925072.1\|3588792_3589452_-\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|237816
NZ_CP040936.1\|WP_139926130.1\|3608374_3608860_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|272871
NZ_CP040936.1\|WP_139926129.1\|3607339_3608038_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|234939
NZ_CP040936.1\|WP_139925068.1\|3581881_3584422_-\|ribonuclease-R	unknown	unknown	gnl\|CDD\|273947
NZ_CP040936.1\|WP_139925077.1\|3598453_3599860_+\|inorganic-phosphate-transporter	unknown	unknown	gnl\|CDD\|376541
NZ_CP040936.1\|WP_139925069.1\|3584841_3585339_+\|DUF2199-domain-containing-protein	unknown	unknown	gnl\|CDD\|378329

Protein	Function_ID	Function_description	E-value
NZ_CP040936.1\|WP_139925068.1\|3581881_3584422_-\|ribonuclease-R	gnl\|CDD\|273947	TIGR02063, Ribonuclease_R, ribonuclease R. This family consists of an exoribonuclease, ribonuclease R, also called VacB. It is one of the eight exoribonucleases reported in E. coli and is broadly distributed throughout the bacteria. In E. coli, double mutants of this protein and polynucleotide phosphorylase are not viable. Scoring between trusted and noise cutoffs to the model are shorter, divergent forms from the Chlamydiae, and divergent forms from the Campylobacterales (including Helicobacter pylori) and Leptospira interrogans. [Transcription, Degradation of RNA].	0
NZ_CP040936.1\|WP_139925070.1\|3585404_3587399_-\|dipeptide-ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	5.52462e-144
NZ_CP040936.1\|WP_139925082.1\|3605146_3607012_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_CP040936.1\|WP_139925079.1\|3600590_3601082_-\|DUF4385-family-protein	gnl\|CDD\|373016	pfam14328, DUF4385, Domain of unknown function (DUF4385). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 149 and 163 amino acids in length.	9.37071e-88
NZ_CP040936.1\|WP_139925081.1\|3604047_3604956_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|372616	pfam13489, Methyltransf_23, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.04672e-28
NZ_CP040936.1\|WP_139925074.1\|3593280_3595722_-\|MMPL-family-transporter	gnl\|CDD\|223964	COG1033, COG1033, Predicted exporters of the RND superfamily [General function prediction only].	5.17796e-74
NZ_CP040936.1\|WP_110976090.1\|3608872_3609331_-\|ATP-binding-protein	gnl\|CDD\|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	8.26411e-28
NZ_CP040936.1\|WP_139925083.1\|3609380_3612803_-\|DUF4175-family-protein	gnl\|CDD\|372724	pfam13779, DUF4175, Domain of unknown function (DUF4175).	2.22053e-20
NZ_CP040936.1\|WP_139925067.1\|3581283_3581778_+\|TonB-family-protein	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	4.68178e-09
NZ_CP040936.1\|WP_139925080.1\|3602171_3603797_-\|hypothetical-protein	gnl\|CDD\|379073	pfam13205, Big_5, Bacterial Ig-like domain.	1.16306e-14
NZ_CP040936.1\|WP_139925066.1\|3580119_3581091_-\|polyprenyl-synthetase-family-protein	gnl\|CDD\|376322	pfam00348, polyprenyl_synt, Polyprenyl synthetase.	6.50148e-87
NZ_CP040936.1\|WP_139925073.1\|3589711_3593113_-\|isoleucine--tRNA-ligase	gnl\|CDD\|235681	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_CP040936.1\|WP_139925071.1\|3587619_3588606_+\|aldo/keto-reductase	gnl\|CDD\|381312	cd19086, AKR_AKR11C1, AKR11C family of aldo-keto reductase (AKR). Bacillus subtilis uncharacterized oxidoreductase YqkF is a founding member of aldo-keto reductase family 11 member C1 (AKR11C1). It may function as oxidoreductase. This family also includes Bacillus halodurans AKR11C1, an NADPH-dependent 4-hydroxy-2,3-trans-nonenal reductase.	9.14753e-107
NZ_CP040936.1\|WP_139926130.1\|3608374_3608860_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|272871	TIGR00043, Endoribonuclease_YbeY, rRNA maturation RNase YbeY. This metalloprotein family is represented by a single member sequence only in nearly every bacterium. Crystallography demonstrated metal-binding activity, possibly to nickel. It is a predicted to be a metallohydrolase, and more recently it was shown that mutants have a ribosomal RNA processing defect. [Protein synthesis, Other].	9.59357e-25
NZ_CP040936.1\|WP_139926129.1\|3607339_3608038_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|234939	PRK01305, PRK01305, arginyl-tRNA-protein transferase; Provisional.	2.29498e-20
NZ_CP040936.1\|WP_139925072.1\|3588792_3589452_-\|lipoprotein-signal-peptidase	gnl\|CDD\|237816	PRK14788, PRK14788, lipoprotein signal peptidase; Provisional.	6.12453e-80
NZ_CP040936.1\|WP_139925077.1\|3598453_3599860_+\|inorganic-phosphate-transporter	gnl\|CDD\|376541	pfam01384, PHO4, Phosphate transporter family. This family includes PHO-4 from Neurospora crassa which is a is a Na(+)-phosphate symporter. This family also contains the leukaemia virus receptor.	2.38039e-54
NZ_CP040936.1\|WP_139925069.1\|3584841_3585339_+\|DUF2199-domain-containing-protein	gnl\|CDD\|378329	pfam09965, DUF2199, Uncharacterized protein conserved in bacteria (DUF2199). This domain, found in various hypothetical bacterial proteins, has no known function.	9.67532e-59

>NZ_CP040936.1|WP_139925075.1|3595958_3596360_+|hypothetical-protein
MILYHSPDAAVTYHPASQTLHLNLTATRSGVSFGQAYQQALEAMLARNVGKLLLDLKHSVSLTEEAELLHPLSTVLPQELPRPLFIAAVVSEGQYRYQIGSSLASYPQLRPKSSSTTLPPAATLPPGWAKTRG
>NZ_CP040936.1|WP_139925074.1|3593280_3595722_-|MMPL-family-transporter
MWRNLALFVIKNRRLLIGLLAIITVFMAWEARKVQMTYDFAQVVAPDDPDMVYFQQFKRQFGEDGNVLVLGMQDSSVYELRKFNELRTLTDTLSRVQGVNGVLGVTRLPRLVKDTATQTFRAEPIFRNFPRTQPELDSLMRVVNSQEFYKGQLISPTTGATLLALTMDPKYLNSSRREAVMQEILGRAERFQAKTGIKMHYAGLPYVRATMTTKVASEMKLFVALTIVMMAATLLMFFRTWSAVVFPLLIVLIVVTWCIGSMVLLGYKINLLTGLIPSIIIVIGIPNCTYLLSRYHYDYRKSGNQVLAMARVVRKIGLVTLMNNTTTAIGFVVFCFTNIAILYQFGLVATLNIFVAFAVSFILMPIIFTILPPPTPKQLEHLEAKPLTKLLEFFDYLVLERRRTVYLTALVLLVLASFGVTKVKSVSYMVDDLPKDSSVNSDLKFFEQHFNGVMPLEMVVDTGRPKGLLKLKNLERIDRLENFLRTQPVLTTPVSVVTFLKASTQAFYNGNPEFYRLPDNSEKNYVFSYLARSQSTKGTEGQLTSKLLRSFTDSTMQQARISLKIADVGSHNLDTLINNRIKPEIDRIFKGTDLKVKLTGTTIIFTKGNEYLIGTLKTSLWHAFLLVGVVVLILFRSIRAVFFTLLPNFFTLLLTGGIMGYFGIPLKPSTALIFSIALGIDGDNSIHLLAKFRQEMAANGRRVKAAITTTLSEAGTSMIYTSIVLFLGFSVFAFSEFGGTKALGLLMSASLLITNFSNLILLPCLLVTFEHGKDEDVIDQSGIRHYDDNYHEEDDDLELNLSRMQVQPKGISS
>NZ_CP040936.1|WP_139925073.1|3589711_3593113_-|isoleucine--tRNA-ligase
MNYPEYKQPLNYGQVGTDILAWWKQNGIFEKSVSTREGQPTFVFYEGPPSANGAPGIHHVMARTVKDIFCRYQTLLGKQVSRKGGWDTHGLPIELQVEKELGITKEDIGKKISIEEYNQRCRETVMRFKAQWDDLTEKMGYWVDLDDPYITFEPEYIESCWALLKKLYDKGYLYKGYTIQPYSPAAGTGLSSHELNQPGTYRDVKDTTIVAQFKVKRDEKSEQLLAGAGEVPTYILAWTTTPWTLPANTGLAVGKGISYVLVRTFNPYTGAPIRVVLAEALVGKYFTDKGKEASLEDYKAGDKVLPWRIEANFKGADLVGIRYERLFGHDKGFPAFEGEENAFRVINGDFVTTEDGTGIVHISPTFGADDFRAAQLAGVPALLVADDEGKLGPVVDRTGRYVAQMGEFGGRWVKNYDGHDQSGADYKTLDESIAIRMKGDGTAFKVEKYEHTYPHCWRTDKPVLYYPLDSWFIKTTAVKHRLIELNKTINWQPESTGTGRFGNWLENLVDWNLSRSRYWGTPLPIWRTQDGSEEICIGSIAELSAEIDKAVAAEVMTHNPIATGEMKDLHRPYVDDVFLVSPSGQPMYRETDLIDVWFDSGAMPYAQWHYPLENKAQFEKNFPADFIAEGVDQTRGWFFTLHALAVMLEDSVAYKNVMANGLVLDKNGNKMSKRLGNAIDPFSTIEQFGPDATRWYMIANAQPWDNLKFDLNGITEVQRRFFGTLFNTYSFYALYANLDGFQAREFDRVPYEELTELDRWILSKLQSLIQEVRGYYDGYDPTKAARAIQDFVTDQLSNWHVRLSRRRFWKGELTADKKAAYETLQECLVVVAQLMAPIAPFFAEWLYQNMTGGMREEAVAKNTPLAPESVHLTLLVQANESRIDKALEERMELAQRISSLTHSLRKKSVLKVRQPLQRILVPVFNETTREQVGKVEDLICAEVNVKHVEFLDDTSGVLVKSVKPNFKRLGQQYGAKLKAVGARIQQMTPEEISTLEKTGQLAVEIDGEAYTLAPDDVEIRTQDLPGWLVATDGPLTVALDVTLTEELRQEGVARELVNRLQNLRKDSGLEVQDRIRVTLGHQPELEAAVQSFGSYIREEVQALALDFAPDLNGGSVLEFDEYTVPVQLEVATA
>NZ_CP040936.1|WP_139925072.1|3588792_3589452_-|lipoprotein-signal-peptidase
MKYWKYYLVALLVIVIDQLSKWAVHRYMPMGMPGEIPVLGDWFKLHYTLNPGMAFGVELPAPYGKVILTLFRLLAVTGISYYIYRLWKQHAPNGLIICIAMILGGAIGNLVDSIFYGVIYDNAPFGAPTPWLHGQVIDMLYVDLYEGILPDSWPLVGGSHVSLWPIFNIADSAIFVGVALILIFQNRFYGQHLEEAHPVAADDATAAQARRDAEASEVA
>NZ_CP040936.1|WP_139925071.1|3587619_3588606_+|aldo/keto-reductase
MHYRKLGKTGFNISEISLGTWQVGGKWGDPFSHETADAILNKAVDSGINFIDTADVYGDGESEKAVGRLVRSRSEQVYVATKCGRQLQPHVNEAYQPEALRKFVEASLRNMQLETLDLIQLHCPPTEVYYRPEIFEVFDRLKDEGKIRNLGVSVEKVEEGLKALMFSNVTTVQLIFNMFRQRPTELLFQEAKRHDVGLIVRVPLASGLLTGKFSRETTFSPDDHRQFNRNGEAFDKGETFSGVDYETGLAAVEELKKIFPDQPNLAPVALRWALMFDEVSCVIPGASRPDQLESNLQAAALPALTAEQMQAVRGVYEQRIKPLVHQVW
>NZ_CP040936.1|WP_139925070.1|3585404_3587399_-|dipeptide-ABC-transporter-ATP-binding-protein
MSQPILSVRNLTIDFASHRGNTRAVADISFDLRRGETLAIVGESGSGKSVTSLALMGLIPLPPGQITSGEARFQSEALGEVDLLQLTDEQLQRVRGNDISMIFQEPMTSLNPVYTCGSQVVEALRLHTTLTEKEAAARTVELFTMAQLPRPEKIFTSYPHEISGGQKQRVMIAMAMACNPAILIADEPTTALDVTVQARMLRLIDDLRRQHNTAVIFITHDLGVVAEIADRILVMYRGRVVEQGTILDIFTNPQHPYTKGLLACRPKLSVGKKKLPVVADFMRETADGGFIATETSATQVVEDVEGESDGLTSQNGNETAKTFPVEHSVSRPVEPHFGLETAPGAESGQPLLLSTDQIGGSVPEGQVSEDATVSLAEKAGVGQAAARVGSVPLLQVENLNVYFPIRKGFFNRTKEFVRAVDGVSFDIYPGETVGLVGESGCGKTTLGRTLLRLVEPTSGSILFEGVDLATLPADQLRRKRREFQMVFQDPYAALNPMMTVGEAIREPMQVHGVGGTRQQQKDRVLELLRTVGLRDEHYLRYPHEFSGGQRQRICIARALALQPKCIICDESVSALDVSVQAQVLNLLNDLKREFGITYLFITHDLSVARFMSDRLLVMRQGKIVESGPAAELYANPQHEYTRQLLAAIPKDEPADIRAAVAGRA
>NZ_CP040936.1|WP_139925069.1|3584841_3585339_+|DUF2199-domain-containing-protein
MPGFTCTTCGQFHEEIPMCFGSEFPDYYFSVPPAERAERVELTSDLCVVDEEHFFIRARIEIPVEGSLEPFCWNVWTSLSEANFIRANEVWNEPDRVNEPAYFGWLQTVIPGYADTLNIRTLVHTQPVGTIPRVEVIEENHPLMLDQRHGISMYRVIELVTPLLH
>NZ_CP040936.1|WP_139925068.1|3581881_3584422_-|ribonuclease-R
MKEKDESAAPRAPRAKAARGDNAAAAPISKDLVFRIFRDNPGKVFAYRQLSRRLGVTTKEQREDVFNHLKALKKAGLLALLQNDDYRLTDAAAAQAATEPASGRKTRRNEREPFAGMSRGGGRPVETEFGQDPVVHRRREAGFDFPDADGPATPRRSRHEGGGEVITGTVALATDKYAFVISEESEQDVRVFTDRLKFAMHGDTVRLRLRGSRDGRPVGDVVEVVNRVRPELVGRLHMQGGIGFVKPDNRKLYFDVFVPYENLHGANHGEKVLVRIAEFPEHDAGHLPVGEVVRSFGKAGENEAEINAIMAEFGLPFEFPAEVEEESESIPLEIPQSELERRRDFRNITTFTIDPADAKDFDDALSIQQLENGHWEIGVHIADVTHYVRPGMALEKEARYRATSVYLVDRVIPMLPERLSNGLCSLRPHEDKLTFSAVFELDENGKLYSSWFGKTIIHSDRRFSYEEAQERIEGLEADYTPEIQLMNDIAKKLCAARFKQGAISFETQEVKFKLDEQGKPLYVYVKERKDAHKMIEEFMLLANRKVAEFVFKLKNRKPRFTMVYRVHDAPDEERLQNFALFAQKFGHQLDLSNPKKLSSELNDLSSEVVGRPEQNVIQTLAIRTMAKATYTTDPRGHFGLAFDHYSHFTSPIRRYPDMMAHRLLEHYLEGGKNVEVEPIEEECKHSSEREKLAANAERASIKYKQVEFLQDRIGDTFTGVVSGLTEWGLYVEIEENKCEGMVRVADIPGDFFELDKDNYRLVGQRSKRIIQFGDEMQVIVKSANLLDRTIDFELVDNRPDSVKNREREERDAHRESRRGYRPERSSGGSKGGRPGGSKSGSSKRRR
>NZ_CP040936.1|WP_139925067.1|3581283_3581778_+|TonB-family-protein
MKLTRCCAVLCCGFLQTAAVAQNSYNWWDARPSAPVTAPPRPARNPAAAAPAPVAADSLPLTSGGYFYVEQVPVFPGGQEALAKVIRKTLKRPSGPRLHGRVMVNLVVQSSGEVTDAQVAPGYGLNTAYDAAAVECIRRLPRFEPGKRNGKVADTAITLPIVFP
>NZ_CP040936.1|WP_139925066.1|3580119_3581091_-|polyprenyl-synthetase-family-protein
MDLSQLTDRINTGLSQLRYGEEPAALYEPIRYIMALGGKRIRPLLTLLGAHVFTDKLEPALKPALATEVFHNFTLLHDDLMDQAPLRRGKATVHEKWNPNVAILSGDVMLVRAYELFLDVPAELLPHVLRRFSQTAAEVCEGQQWDMNFETETEVSIAQYLDMIRLKTAVLLGFALELGALLGGASRQDADHLRQFGVGIGVAFQLRDDLLDVYGDAATFGKRVGGDILSDKKTYLLLTAVAQASEAQRAVLAQHIGQPVADADAKVQAVRTIYDELEIRPQTEALINDYFLDALQHLERVEAPEMRKNPLRQLALQLMEREQ
>NZ_CP040936.1|WP_139925077.1|3598453_3599860_+|inorganic-phosphate-transporter
MFGLEPHVLLLLIACLVAACAFEFVNGFHDTANAVATVIYTNSLRPWVAVVWSAFWNFVGVIAGGISVAMSIVYLLPVESLVDQNVYHGIAMVGALIVAAIIWNVGTWYYGLPSSSSHALIGSILGVGIAFSLLPGSGASAVNWGKAGETGAALLISPLFGFSLTIVLMFLLRRFVRNKAIFKEPHKRKPPPIWIRLILIATCTLVSYFHGSNDGQKGVGLIMLILIGIVPVHFALNQKLNPLDMRDSLTRVEQVMQKLNPAELGEADRKLLAEVRTQTTTLDQIFAGKTDVKQLPEQSRFEIRKAILLLYTRAKKLTASEKVPLSSADRKVYEDSIAQMRTFTDYAPWQVSLMVALSLGIGTMIGWQRIVKTIGERIGKEHLTYAQGASSELVAAAMIGASTGFGLPSSTTHVLSSAIAGSMVANRGIKNLNPQMVRNIALAWVLTLPVTMVLAGGLFLLFRSIMPS
>NZ_CP040936.1|WP_139925078.1|3600053_3600536_-|hypothetical-protein
MQTPAQSSSTDENEITLGIGMGPLKFGASMDEVRALMGEPEEIEESEDDDEFEHQAWNYLEEGYSLYFDREDDYRLSCIETDHPGIRLYGEAIHGKSPEEIQDLMKRHGHEQSEVEKMDTGEMRLSYEKEMIDMYFDENELQFVNFGVFINDDLEVQWPA
>NZ_CP040936.1|WP_139925079.1|3600590_3601082_-|DUF4385-family-protein
MPFDYSLDFRTVDFRQHPELYRVGKGEQGVLLVQPYKGEILPHWRFRTPEVAQESGEKIYGLFEAYLKAHDFVGADMARKFLQMGFTRARRYANHRGGKKYDGPVPDDKKGQSGAHGREELPRTPEDPAKAAAAAIFKQLWDKAKQHPEYVRQRAEFEARYGK
>NZ_CP040936.1|WP_139925080.1|3602171_3603797_-|hypothetical-protein
MPLPSRASVLLLLLGAAGLHGCAAISSPEGGVRDTTPPKLLRTVPANGARNVTGQSVRLEFSEQVQIKDLQKNLIVAPLLDEKNTYKVREDRTAITLTFDKPFAPNTTYSFNFGNSISDITESNPAQKAMVSFSTGAQLDSGSVRGVVTDVLTQAPYENASVVLYPEADTANVRRGKPYYLARTDKQGRFELNYLKEGRYRAFALADKNQSNRYEEGERIGYLSDLLTIGPTTDSLNFRLTRPDTRRPLITTQKPNPTDFRVSYNEGVAQVALAPLGTAAPVPALAEAVQTADQGRTVVLYRTPALAEGRYLLTATDSVGNTGRDTVSVRFQGNAPARKGSAYVVEGNPREVYRQGQVKFVFKEPVRLVSNKSIGTLVEDSVKRRPLRLPQDGALSADRSTLALALNTNARRNITILLDSSVVGSITGQSLGLKPLRLRVTEQNTTGSLSGPVQTKATRYWVQLLDASSQVQTTLDTPRGTYRFDYLSPGTYRLRVLIDANQDGRWQGGDPQLRQQPEPVFLFPKAIEIRSNFDNVETLSF
>NZ_CP040936.1|WP_139925081.1|3604047_3604956_-|methyltransferase-domain-containing-protein
MIYERLEKCPVCGKTEFRNKLVVEDKSVSKESFAIQQCEACSFQFTNPRPDAAHIGRYYESDEYVSHNSGAGGVINQAYKVARFFTMRRKVALVNKLAPRKGRLFDYGCGTGHFLAAAKGNGWQVAGWEPNERARQEAAQRVGHNLELQADLTRFPAGSFDAITLWHVLEHVHELNDTLQQLIRLLKPDGTLAIAVPNVDSLDAQHYRQDWAAYDVPRHLYHFTPKTMTQLLKKHKLQVREVLPMPLDAYYVSMLSEKHRAERGGGMLTVLKAGYKSNQYAASHEGQYSSLIYVARKRQPVG
>NZ_CP040936.1|WP_139925082.1|3605146_3607012_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MQQEEYDVIVVGAGHAGCEAAAAAANMGSKVLLVTMNMNTIAQMSCNPAMGGVAKGQIVREVDALGGQSGIITDKTMIQFRMLNRSKGPAMWSPRAQSDRMRFAEEWRLTLEQTLNVDFWQEAVMGILVENDTVVGVKTQLGIEFRGKAVVLTNGTFLNGLIHIGEKQFGGGRAAESRSTGITEQLKELGFEAGRMKTGTPPRVDGRSLDYSKMEEQPGDEVPSKFSYLDTPALVKQRPCYITYTNPEVHEILKEGFEKSPMFQGRIKGLGPRYCPSVEDKINRFADKDRHQIFVEPEGWSTVEVYVNGFSSSLPEDVQYRALRKIAGFENAKMFRPGYAIEYDFFPPTQLQLTLETKRISNLYFAGQINGTTGYEEAACQGLMAGINAHNKVHGKEPFILKRSEAYIGVLIDDLVNKGTDEPYRMFTSRAEHRLLLRQDNADLRLTPLGYALGLASEERMERVREKENQTAEVVELLKSFGIEPQEINDWLTEIGSATIHEKTRAVNLLRRPNVDLPALARVLPGLTLALAPYGPEALEQAEILVKYESYLVKEHQQAARVQELENFQIRGRLDYHAMPALSHEAREKLLKIQPETLGQASRISGVSPADVSVLMVYLGR
>NZ_CP040936.1|WP_139926129.1|3607339_3608038_-|GNAT-family-N-acetyltransferase
MRGDALDFYLSQGYYRMHQDLFTCRFLPLDDDLYTVHWLRLMLSQVQYGPEQRRLLRYNERFTTVIRPFRLTEEYEELYALYRSSITFDAPETVEAFLLAGATHNVFTTEVIEVRDEGQLIAVGIFDSGARSIAGIMNFYHPAYRKHSLGKYLMLLKINQALHLHKAYYYPGYLVHRYPKFDYKLFPCLAATEVFDAATGQWLPFSWEAVAAQSAELLADWPTDYLNNDLTE
>NZ_CP040936.1|WP_139926130.1|3608374_3608860_-|rRNA-maturation-RNase-YbeY
MSDLPTEYDDQEHDDFGHDEGPGIEFLVEDVDFELADAQDLTSWIERVAEVHEHEIVQLTYIFCSDEYLHKVNMEYLEHDTYTDVITFDNADDADIIEGDIFISVERVRENAQIHGVSFRDELHRVMIHGVLHLLGYADKDLLSQTAMRKKEDDCLLLRTF
>NZ_CP040936.1|WP_110976090.1|3608872_3609331_-|ATP-binding-protein
MKQVKIQIPSLVENIRVVESFIDNSKDTFHIEDDIYGNIMVAVTEAVNNAIRHGNKFDKDKNVFLSLFVDQDRVKFEIEDEGTGFDYTNLIDPTAPENLENPGGRGIFLIRHLADEVEFTKDGRNVQLTFMLPAPSASEAGSAVNGAETATH
>NZ_CP040936.1|WP_139925083.1|3609380_3612803_-|DUF4175-family-protein
MVVEKDPATTRALDDVLARLDAFKRKFYLSLLVRGALVAGGLLLSLFLVFNLLEYFLYLPTWVRAGLLFGFVAGMLYAFGRWIWQPLAALTNLRRMLSDEQAARRVGELFPDVQDKLLNALQLRGQAQENALLAASLEQRAGQLRGVEFSQGINIQAQTKPLWKYVAIPGAVVVLLLLVYPSLFVQGTERILNYNQKYSPPAPFRFVVENRNLTAFKGEDFTLNVTVEGEALPNEISIVYGGRERHLVRETGNRFRYDFRQLRENVEFQLVAAGFTSPEYDLTVKARPNLRDFTVRVSYPTYLGKPAETIRNSGNLTVPEGSDLRWEFQTEATDQLQLKFRNPDEVVSAQPDDEQFLLSRRAMRSQQYSVHLRNANSLNRDPIEYQITVIPDQVPDVTLEAFQDTTSLRYLALGGNVRDDYGLSRLQLHYRVLSKGRPNAAYQTRALPLGSGPSQSYAYQWDVRPLNMRPGDRLEYFVQVWDNDGVHGPKSARSRTAEFRLPSRTELRQQLASQSQAVQSQLSQAAQQSKKMERELAKAEDKLKVKRDLNFQDRKQLRDMLDQKQQMDQALDELKRQFEQLQEQQNQLDPQKNEELAQKAEELKKLMETLLDPETKKLYEELQKLLEQQQDQNQPEMQRLMQQLENKENTLQKELERALEMFKQLQFEQKQDQALEKLQQLAQEQQKLADETQKNDKNNPDNNLSKDQQQQKQQDLKQQQAEQQQKFDELKQDLKDMKELDQQLGGENQADEMKQDQQQVDEQQQDSQEQLGKNQNQKASQSQKQAAQKMQQMAQKMQQQMNEEEQDQQQENIDDLRDILENLLKLSFDQENLMKQFRTVDQSDPRFVQLGQTQRKLKDDARVVQDSLYALAKRVFQIKSFVTREVGEMNGRMDESLDQIRQRNVGRATSSQQLAMTSMNNLALMLNDALQQMQEQQRQSQSQQQQGGGKPGRKKKKGSSAGEGQLGRMQQQLNQQIQQLQQSGKQGRALSEELAKLAGQQQMLRQAMQELERMQQKGGGKPGNNKDGKGQDGAGGLGDVKKMMEQTETDLVNKRLTEQTIMRQRQILTRLLEAEKSARERDQDDKREAQTAQNRPPVFPPAFQQYKRQQNRQTELLRTVPPALTPYYQREVSEYFQKMK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3450385 : 3458605

Tupanvirus(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139924971.1\|3450385_3451363_+	isopenicillin N synthase family oxygenase	S4VNP9	Pandoravirus	1.1e-22	30.2
WP_139924972.1\|3451562_3452792_+	chromate efflux transporter	NA	NA	NA	NA
WP_139924973.1\|3452951_3453830_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.4e-96	59.0
WP_139924974.1\|3453880_3454888_-	NAD-dependent epimerase/dehydratase family protein	A0A2K9L4U8	Tupanvirus	3.4e-91	52.2
WP_139924975.1\|3455003_3456056_-	dTDP-glucose 4,6-dehydratase	A0A291LAD7	Escherichia_phage	2.6e-89	49.1
WP_139924976.1\|3456186_3457212_-	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	7.1e-68	40.7
WP_139924977.1\|3457306_3458605_-	nucleotide sugar dehydrogenase	A0A218MKK1	uncultured_virus	2.2e-05	22.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP040937

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 14363

uncultured_Mediterranean_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926524.1\|194_1199_+	hypothetical protein	NA	NA	NA	NA
WP_044019207.1\|1202_1904_+	recombinase family protein	A0A1B1IWV2	uncultured_Mediterranean_phage	1.9e-27	48.0
WP_044019208.1\|2153_2915_+	ParA family protein	F0PIG8	Enterococcus_phage	5.5e-17	27.7
WP_125433395.1\|2911_3280_+	hypothetical protein	NA	NA	NA	NA
WP_135437037.1\|3559_4786_+	replication initiation protein	NA	NA	NA	NA
WP_139926178.1\|5517_5847_+	hypothetical protein	NA	NA	NA	NA
WP_139926179.1\|5910_10263_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	4.1e-72	23.9
WP_135437034.1\|10291_11482_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_139926180.1\|11585_13655_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.2e-95	34.1
WP_135437032.1\|13676_14363_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	3.6e-07	40.6

DBSCAN-SWA_2

24266 : 26669

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_135437022.1\|24266_26669_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.1e-82	31.3

DBSCAN-SWA_3

30709 : 34712

Halovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_135437021.1\|30709_31483_+	metallophosphoesterase family protein	R4T9B5	Halovirus	1.7e-10	26.2
WP_044019218.1\|31495_31990_+	N-acetyltransferase	NA	NA	NA	NA
WP_052381916.1\|32004_33111_+	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_044019220.1\|33207_33420_-	hypothetical protein	NA	NA	NA	NA
WP_052381937.1\|33462_33711_-	hypothetical protein	NA	NA	NA	NA
WP_139926182.1\|33723_34347_-	mercuric transport protein MerTP	NA	NA	NA	NA
WP_139926183.1\|34343_34712_-	metalloregulator ArsR/SmtB family transcription factor	E4ZFI8	Streptococcus_phage	6.2e-06	37.3

DBSCAN-SWA_4

45436 : 50726

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926529.1\|45436_47686_-	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.6e-101	35.0
WP_139926192.1\|48163_48661_+	hypothetical protein	NA	NA	NA	NA
WP_139926193.1\|48989_49952_+	hypothetical protein	NA	NA	NA	NA
WP_139926195.1\|49994_50726_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	8.5e-07	34.7

DBSCAN-SWA_5

55166 : 58388

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926200.1\|55166_58388_+	CusA/CzcA family heavy metal efflux RND transporter	S5VL66	Leptospira_phage	1.0e-32	20.5

DBSCAN-SWA_6

73863 : 74961

Acidianus_tailed_spindle_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044019251.1\|73863_74961_+	AAA family ATPase	A0A125SJ49	Acidianus_tailed_spindle_virus	3.1e-13	26.6

DBSCAN-SWA_7

94184 : 107085

Diadromus_pulchellus_ascovirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044019261.1\|94184_94913_-	SDR family oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	5.1e-20	32.6
WP_044019263.1\|94945_95218_-	hypothetical protein	NA	NA	NA	NA
WP_135533000.1\|95241_95982_-	ZIP family metal transporter	NA	NA	NA	NA
WP_044019265.1\|96078_97491_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	7.5e-44	29.3
WP_044019267.1\|97516_98413_-	cation transporter	NA	NA	NA	NA
WP_081910975.1\|98409_100674_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.4e-100	34.4
WP_044019269.1\|100721_101327_-	hypothetical protein	NA	NA	NA	NA
WP_044019271.1\|101384_102575_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_044019272.1\|102606_107085_-	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	3.3e-69	24.5

DBSCAN-SWA_8

132885 : 133545

Burkholderia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926230.1\|132885_133545_+	AAA family ATPase	E5FFJ3	Burkholderia_phage	2.0e-31	39.7

DBSCAN-SWA_9

138766 : 144796

Cyanophage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926239.1\|138766_144796_+	hypothetical protein	M1PQV8	Cyanophage	4.1e-06	31.0

DBSCAN-SWA_10

168520 : 172347

Pseudoalteromonas_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926267.1\|168520_168934_-	single-stranded DNA-binding protein	A0A1J0GVQ0	Pseudoalteromonas_phage	4.1e-06	37.6
WP_139926268.1\|169101_170124_-	DUF5131 family protein	K7ZPX2	Xanthomonas_citri_phage	1.8e-63	44.8
WP_139926270.1\|170319_172347_-	DNA cytosine methyltransferase	A0A0S2MWF9	Cellulophaga_phage	2.4e-11	54.3

DBSCAN-SWA_11

184574 : 188709

uncultured_Mediterranean_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926291.1\|184574_185513_-	DUF1738 domain-containing protein	A0A1B1IRD0	uncultured_Mediterranean_phage	1.1e-56	44.0
WP_139926293.1\|185649_185967_-	hypothetical protein	NA	NA	NA	NA
WP_139926295.1\|186001_186391_-	hypothetical protein	A0A0A0RMH6	Bacillus_phage	2.3e-11	40.2
WP_139926297.1\|186404_186719_-	hypothetical protein	NA	NA	NA	NA
WP_139926299.1\|186940_188236_-	DUF4113 domain-containing protein	I6RSM4	Salmonella_phage	3.7e-90	45.4
WP_139926301.1\|188241_188709_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	5.8e-25	46.7

DBSCAN-SWA_12

193004 : 199260

Acinetobacter_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926315.1\|193004_193856_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	6.3e-54	43.4
WP_139926534.1\|194115_194973_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_139926317.1\|195240_195876_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	A0A0P0IVM8	Acinetobacter_phage	3.5e-17	36.7
WP_139926319.1\|195880_196867_+	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA
WP_139926321.1\|196920_199260_+	molybdopterin-dependent oxidoreductase	A0A0P0I429	Acinetobacter_phage	3.8e-48	26.3

DBSCAN-SWA_13

222608 : 227758

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926367.1\|222608_223058_-	HNH endonuclease	F5B475	Synechococcus_phage	8.0e-08	43.6
WP_139926368.1\|223722_224058_+	gliding motility protein GldC	NA	NA	NA	NA
WP_139926370.1\|224230_224539_-	hypothetical protein	NA	NA	NA	NA
WP_139926372.1\|224604_225006_-	hypothetical protein	NA	NA	NA	NA
WP_139926374.1\|225032_225545_-	hypothetical protein	L7TM42	Rhizobium_phage	3.3e-05	30.7
WP_139926375.1\|225586_225943_-	hypothetical protein	NA	NA	NA	NA
WP_139926377.1\|226120_227758_-	ParB/RepB/Spo0J family partition protein	S5VTK0	Leptospira_phage	5.5e-14	27.6

DBSCAN-SWA_14

237105 : 239535

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926395.1\|237105_239535_-	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	2.5e-87	37.5

DBSCAN-SWA_15

272513 : 273344

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926442.1\|272513_273344_+	AAA family ATPase	F0PIG8	Enterococcus_phage	1.1e-13	26.8

DBSCAN-SWA_16

286600 : 290537

Vibrio_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926471.1\|286600_288355_-	DUF4942 domain-containing protein	M4M9L8	Vibrio_phage	3.0e-10	26.0
WP_139926472.1\|288506_289250_-	hypothetical protein	NA	NA	NA	NA
WP_139926474.1\|289432_289738_-	hypothetical protein	NA	NA	NA	NA
WP_139926476.1\|289775_290537_-	hypothetical protein	A0A1R3Y5Q7	Salmonella_virus	1.1e-44	41.6

DBSCAN-SWA_17

304399 : 305104

uncultured_marine_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_139926538.1\|304399_305104_-	recombinase family protein	A0A0F7L6S1	uncultured_marine_virus	9.9e-29	39.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP040936

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP040937

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection