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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP034395 Herbaspirillum seropedicae strain AU13965 chromosome, complete genome 1 crisprs WYL,cas3,DinG,DEDDh,csa3 0 0 5 0
NZ_CP034394 Herbaspirillum seropedicae strain AU13965 plasmid unnamed, complete sequence 0 crisprs DEDDh 0 0 1 0

Results visualization

1. NZ_CP034395
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034395_1 4198634-4198779 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1460825 : 1468387 7 Phage_21(16.67%) protease NA
DBSCAN-SWA_2 3216171 : 3226387 9 Bacillus_phage(28.57%) NA NA
DBSCAN-SWA_3 3504379 : 3559728 67 Ralstonia_virus(22.73%) transposase,tail,head,portal,terminase,integrase attL 3546080:3546096|attR 3571128:3571144
DBSCAN-SWA_4 4630791 : 4640537 9 Synechococcus_phage(42.86%) NA NA
DBSCAN-SWA_5 4850845 : 4863841 13 Escherichia_phage(30.0%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP034394
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 15101 : 24739 9 Thermoanaerobacterium_phage(42.86%) terminase,portal NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage