CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP041086	Klebsiella pneumoniae strain Kp202 plasmid pKp202_4, complete sequence	0 crisprs	RT	0	0	1
NZ_CP041082	Klebsiella pneumoniae strain Kp202, complete genome	4 crisprs	csa3,cas3,DEDDh,DinG,RT,WYL	2	1	8
NZ_CP041083	Klebsiella pneumoniae strain Kp202 plasmid pKp202_1, complete sequence	0 crisprs	DEDDh	0	0	1
NZ_CP041089	Klebsiella pneumoniae strain Kp202 plasmid pKp202_7, complete sequence	0 crisprs	NA	0	0	0
NZ_CP041085	Klebsiella pneumoniae strain Kp202 plasmid pKp202_3, complete sequence	0 crisprs	NA	0	0	0
NZ_CP041087	Klebsiella pneumoniae strain Kp202 plasmid pKp202_5, complete sequence	0 crisprs	NA	0	0	0
NZ_CP041084	Klebsiella pneumoniae strain Kp202 plasmid pKp202_2, complete sequence	0 crisprs	csa3,RT	0	0	2
NZ_CP041088	Klebsiella pneumoniae strain Kp202 plasmid pKp202_6, complete sequence	0 crisprs	NA	0	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

107217 : 135673

Enterobacteria_phage(22.22%)

transposase,integrase

attL 112479:112492|attR 132701:132714

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020442388.1\|107217_108222_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001294663.1\|108807_109158_+	mercuric transport protein MerT	NA	NA	NA	NA
WP_000732292.1\|109171_109447_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001340589.1\|109482_109905_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_020442400.1\|109956_111651_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	2.0e-38	27.6
WP_001277456.1\|111668_112031_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000993386.1\|112027_112264_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_000204520.1\|112260_112968_+	EAL domain-containing protein	NA	NA	NA	NA
112479:112492	attL	NA	NA	NA	NA
WP_000935452.1\|113006_114311_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_000027057.1\|114879_115740_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001217881.1\|115922_116480_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.0e-93	98.4
WP_000608644.1\|117043_118306_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_000239590.1\|118561_119437_+	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
WP_001393253.1\|119483_119816_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
WP_004896925.1\|122877_123420_+	hypothetical protein	NA	NA	NA	NA
WP_000155092.1\|123778_124663_-	Mph(E) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_000052512.1\|124718_126194_-	ABC-F type ribosomal protection protein Msr(E)	A0A1B0RXA0	Streptococcus_phage	2.3e-160	59.0
WP_002001451.1\|126592_127777_-\|transposase	IS4-like element ISEc29 family transposase	A0A0F7LAS3	uncultured_marine_virus	4.5e-50	35.4
WP_002026779.1\|127825_128011_+	hypothetical protein	NA	NA	NA	NA
WP_077252464.1\|128230_128512_+	hypothetical protein	NA	NA	NA	NA
WP_140561819.1\|128492_129266_-	Rmt family 16S rRNA (guanine(1405)-N(7))-methyltransferase	NA	NA	NA	NA
WP_000050481.1\|130664_132206_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000259031.1\|132610_133450_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
132701:132714	attR	NA	NA	NA	NA
WP_060560601.1\|133443_133746_-	bleomycin resistance protein	NA	NA	NA	NA
WP_004201164.1\|133749_134562_-	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA
WP_004683689.1\|134662_135673_-\|transposase	IS30-like element ISAba125 family transposase	W5R8L2	Staphylococcus_phage	4.1e-52	38.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP041086

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6380 : 60639

Escherichia_phage(34.62%)

integrase,transposase

attL 16543:16602|attR 59389:60182

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000227969.1\|6380_7457_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001067855.1\|8169_8874_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001445937.1\|9450_10407_+	hypothetical protein	NA	NA	NA	NA
WP_000176305.1\|10591_11203_-	DUF2913 family protein	NA	NA	NA	NA
WP_001568067.1\|11256_11538_-	hypothetical protein	NA	NA	NA	NA
WP_011977766.1\|11710_12046_+	C2H2-type zinc finger protein	NA	NA	NA	NA
WP_032445200.1\|12596_12785_+	hypothetical protein	NA	NA	NA	NA
WP_001327128.1\|13268_13463_-	hypothetical protein	NA	NA	NA	NA
WP_000807690.1\|13463_14219_-	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	4.5e-136	96.0
WP_000861580.1\|15230_15422_-	hypothetical protein	NA	NA	NA	NA
WP_001039463.1\|15430_15817_-	hypothetical protein	NA	NA	NA	NA
WP_071549086.1\|16362_16623_+	hypothetical protein	NA	NA	NA	NA
16543:16602	attL	NA	NA	NA	NA
WP_001067855.1\|16568_17273_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000522996.1\|18483_18909_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_000732275.1\|18936_19212_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_004200999.1\|19227_19593_-	mercuric ion transporter MerT	NA	NA	NA	NA
WP_001166628.1\|19664_20120_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001776119.1\|20379_20907_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.7e-21	39.5
WP_001776120.1\|20939_21371_-	hypothetical protein	NA	NA	NA	NA
WP_001776122.1\|21850_22816_-	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	1.6e-58	42.7
WP_032419551.1\|23023_23293_-	hypothetical protein	NA	NA	NA	NA
WP_004152765.1\|23285_24770_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_009483812.1\|24769_25021_-	hypothetical protein	NA	NA	NA	NA
WP_000776034.1\|25178_25610_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.6e-29	53.3
WP_004118291.1\|25609_26881_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	4.9e-151	63.3
WP_012600007.1\|26962_27940_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	2.6e-88	54.4
WP_000368714.1\|27936_29142_-	ParA family protein	A0A077SL49	Escherichia_phage	2.4e-163	69.6
WP_000339857.1\|29556_29826_+	hypothetical protein	NA	NA	NA	NA
WP_100115263.1\|29858_30056_-	hypothetical protein	NA	NA	NA	NA
WP_004118283.1\|30182_31049_-	replication initiation protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
WP_000764642.1\|31816_32074_+	hypothetical protein	NA	NA	NA	NA
WP_000015958.1\|32131_32908_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	6.4e-53	92.9
WP_000129823.1\|32904_33648_-	hypothetical protein	NA	NA	NA	NA
WP_000493378.1\|33698_34049_-	hypothetical protein	NA	NA	NA	NA
WP_015060090.1\|34192_34627_-	hypothetical protein	NA	NA	NA	NA
WP_001261282.1\|34610_34841_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_001044770.1\|34837_35254_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_004152334.1\|35327_36038_+	AAA family ATPase	NA	NA	NA	NA
WP_072093211.1\|36769_36895_+	mercury transporter	NA	NA	NA	NA
WP_001340589.1\|36930_37353_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_000105636.1\|37404_39099_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
WP_001277456.1\|39116_39479_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000993386.1\|39475_39712_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_000204520.1\|39708_40416_+	EAL domain-containing protein	NA	NA	NA	NA
WP_000935452.1\|40454_41759_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_000027057.1\|42326_43187_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001217881.1\|43369_43927_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.0e-93	98.4
WP_000608644.1\|44490_45753_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_000239590.1\|46008_46884_+	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
WP_001393253.1\|46930_47263_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
WP_001067855.1\|48733_49438_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067855.1\|50412_51117_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_015344971.1\|51356_51641_-	hypothetical protein	NA	NA	NA	NA
WP_000845048.1\|51609_52623_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_004201280.1\|52778_53252_+	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
WP_001144737.1\|53472_53739_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_001389365.1\|53881_54646_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_024139167.1\|54687_54900_+	hypothetical protein	NA	NA	NA	NA
WP_001749969.1\|54912_56121_+	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_001288432.1\|56154_57588_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
WP_001749967.1\|57969_58176_-	hypothetical protein	NA	NA	NA	NA
WP_071549088.1\|58180_58693_-	restriction endonuclease	NA	NA	NA	NA
WP_001067855.1\|58717_59422_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_087759376.1\|59519_60639_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.0e-52	43.2
59389:60182	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP041082

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041082_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041082_1

1175301-1175409

Orphan

Consensus_repeat	Method
TGTCCCACCCTGTACCACTTTTTTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041082_1

>merge|NZ_CP041082|1|1175301-1175409|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTAAACCAAATTCTGTAATGTGGGACGCTGAAACCCGCGCCAGCTCTGCGTGTACCACTTGTCCCACCCTGTACCACCTTTTTTTA

>NZ_CP041082|1|1|1175301-1175409|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTAA	ACCAAATTCTGTAATGTGGGACGCTGAAACCCGCGCCAGCTCTGCGTGTACCACT
TGTCCCACCCTGTACCACCTTTTTTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041082.1\|WP_087757875.1\|1174752_1175109_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP041082.1\|WP_140561723.1\|1178229_1182033_-\|DNA-binding-protein	unknown	unknown	unknown
NZ_CP041082.1\|WP_004145682.1\|1186915_1187206_+\|RnfH-family-protein	unknown	unknown	gnl\|CDD\|234982
NZ_CP041082.1\|WP_071549035.1\|1186449_1186926_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	unknown	unknown	gnl\|CDD\|182678
NZ_CP041082.1\|WP_032418448.1\|1172391_1173372_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
NZ_CP041082.1\|WP_002914164.1\|1185856_1186339_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455
NZ_CP041082.1\|WP_032418449.1\|1173368_1173743_-\|PTS-glucitol/sorbitol-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|226254
NZ_CP041082.1\|WP_077256168.1\|1170077_1170323_-\|holin	unknown	unknown	unknown
NZ_CP041082.1\|WP_123836165.1\|1168687_1169233_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041082.1\|WP_032418456.1\|1175427_1177497_-\|DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|227806
NZ_CP041082.1\|WP_002914160.1\|1187272_1187614_-\|outer-membrane-protein-assembly-factor-BamE	unknown	unknown	gnl\|CDD\|183190
NZ_CP041082.1\|WP_032418458.1\|1177532_1177748_-\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
NZ_CP041082.1\|WP_032418453.1\|1174373_1174658_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|372675
NZ_CP041082.1\|WP_140561725.1\|1182409_1183333_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290455
NZ_CP041082.1\|WP_032418444.1\|1169254_1169704_-\|phage-virion-morphogenesis-protein	unknown	unknown	gnl\|CDD\|368274
NZ_CP041082.1\|WP_004174799.1\|1187761_1189423_-\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|236781
NZ_CP041082.1\|WP_032418447.1\|1171367_1172381_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP041082.1\|WP_002914158.1\|1189509_1190388_-\|NAD(+)-kinase	unknown	unknown	gnl\|CDD\|235122
NZ_CP041082.1\|WP_071844617.1\|1170720_1170927_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041082.1\|WP_032418451.1\|1173739_1174261_-\|PTS-sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226253

Protein	Function_ID	Function_description	E-value
NZ_CP041082.1\|WP_087757875.1\|1174752_1175109_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.98259e-09
NZ_CP041082.1\|WP_004145682.1\|1186915_1187206_+\|RnfH-family-protein	gnl\|CDD\|234982	PRK01777, PRK01777, RnfH family protein.	7.65271e-47
NZ_CP041082.1\|WP_002914158.1\|1189509_1190388_-\|NAD(+)-kinase	gnl\|CDD\|235122	PRK03378, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional.	0
NZ_CP041082.1\|WP_032418448.1\|1172391_1173372_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	1.71362e-173
NZ_CP041082.1\|WP_032418449.1\|1173368_1173743_-\|PTS-glucitol/sorbitol-transporter-subunit-IIA	gnl\|CDD\|226254	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism].	3.73192e-58
NZ_CP041082.1\|WP_071549035.1\|1186449_1186926_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	gnl\|CDD\|182678	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin.	3.17506e-105
NZ_CP041082.1\|WP_032418456.1\|1175427_1177497_-\|DUF927-domain-containing-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	0
NZ_CP041082.1\|WP_002914160.1\|1187272_1187614_-\|outer-membrane-protein-assembly-factor-BamE	gnl\|CDD\|183190	PRK11548, PRK11548, outer membrane protein assembly factor BamE.	5.2573e-82
NZ_CP041082.1\|WP_032418458.1\|1177532_1177748_-\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	5.83127e-21
NZ_CP041082.1\|WP_032418453.1\|1174373_1174658_-\|transcriptional-regulator	gnl\|CDD\|372675	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding.	1.06433e-37
NZ_CP041082.1\|WP_140561725.1\|1182409_1183333_+\|IS5-family-transposase	gnl\|CDD\|290455	pfam13737, DDE_Tnp_1_5, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	3.84281e-55
NZ_CP041082.1\|WP_032418444.1\|1169254_1169704_-\|phage-virion-morphogenesis-protein	gnl\|CDD\|368274	pfam05069, Phage_tail_S, Phage virion morphogenesis family. Protein S of phage P2 is thought to be involved in tail completion and stable head joining.	6.12186e-39
NZ_CP041082.1\|WP_004174799.1\|1187761_1189423_-\|DNA-repair-protein-RecN	gnl\|CDD\|236781	PRK10869, PRK10869, recombination and repair protein; Provisional.	0
NZ_CP041082.1\|WP_032418447.1\|1171367_1172381_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.08412e-65
NZ_CP041082.1\|WP_032418451.1\|1173739_1174261_-\|PTS-sorbitol-transporter-subunit-IIC	gnl\|CDD\|226253	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism].	6.94718e-79
NZ_CP041082.1\|WP_002914164.1\|1185856_1186339_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	5.43734e-87

>NZ_CP041082.1|WP_087757875.1|1174752_1175109_+|helix-turn-helix-transcriptional-regulator
MPEDGCCPERDNSCIFRCRVAIVIGKRLKISRVRADLTQAELGVLAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYFYAVDDELAELILQYHRFKKNNPGRTLLFSPNP
>NZ_CP041082.1|WP_032418453.1|1174373_1174658_-|transcriptional-regulator
MKKSTTKDWHPADIIAALHKRGTSLAKLSREAGLASSTLSNTLTRAWPKGEWLIAIALDVHPSEIWPGRYLNSSNKREPRKPLHPMTTTDNSGT
>NZ_CP041082.1|WP_032418451.1|1173739_1174261_-|PTS-sorbitol-transporter-subunit-IIC
MFLVSLAEGFIHLFQAAGKIFLDMMTGLIPMLICLLLAINFLMKLVGTIRMEKVAALLGRSRILTYGVLPVLGWFFMSSPGALTLGKLLPEKSKPGYEDALGTTAHPLTSLFPHVVPSELFVWLGVAAGVKALGLPVTSLALRYIAAAMLIGLIRGIITEYLFLRLSKRGNVP
>NZ_CP041082.1|WP_032418449.1|1173368_1173743_-|PTS-glucitol/sorbitol-transporter-subunit-IIA
MMIYCARITAIGLFVADGLTDKMLITFDSNGPKDCLDYSLSLEPSFREESLMILPGDRLMLAGHDYLVTAVGKGAQQALFELGHLTLVFNGDLNPCHTGTVHLSGPVPNLRDLHGNLVIEEGRP
>NZ_CP041082.1|WP_032418448.1|1172391_1173372_-|PTS-glucitol/sorbitol-transporter-subunit-IIB
MNTVLIPPGPGGYGKGLWLPVASGKKVLSLTGREIHPVAIEIGALTESEIVNGFSDIPPDNDILCVVINCAGSLRCGLYPQKGIPTINVLPTWRAGPLAHFITEENYVSDVTMEQLVLVDTAEAPDSEPEITPEPALRVITTPPPPRGAEKLVRMVEQTGTAVGHVIALLFAASREAVDVSLRNVIPFMAFVSLLIALVQETALGSLIAHAMTPLANSLWGLVLLSLICGIPFLSPVLGPGAAISQVIGVMIGTQIGAGAISPAFALPALFAINVQVGCDFVPVGLSMQEAKPETIAKGVPAFLLSRQLTGPLAVIIGWLFSLGLF
>NZ_CP041082.1|WP_032418447.1|1171367_1172381_-|Gfo/Idh/MocA-family-oxidoreductase
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGVIGYTRLDVLLQEEAIDVVSVATPDPYHTESILTALRHGKHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDLAVMRIKAELEKPEAGRILRGHISMDDVISVPTEWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWVVENSWVLPEGFPKDNDGRIDILCEATYIRSTSQHLGLEITTPGMTLTPNSYFINYRNGIASGFGIDPINDFVRAVRNRSPYPVTAVDGLAVSRICEAVHRSLKSGKPEKI
>NZ_CP041082.1|WP_071844617.1|1170720_1170927_-|hypothetical-protein
MESEHEAINIALTIENGVVTNVRQIRKDEHIASLETFLWIVKRAGYEVVPPQESTQDPENIKVLAEVE
>NZ_CP041082.1|WP_077256168.1|1170077_1170323_-|holin
MLCAGCTSAPPVPTPVIVYNACPRVSLCPMPGSDPTTNGDLSADIRQLVSALEGCALQVRTVKNCQDKIDVQAKESAKSLN
>NZ_CP041082.1|WP_032418444.1|1169254_1169704_-|phage-virion-morphogenesis-protein
MNDFKPFDDKLAGLIAALSPTARRKMAADIAKPLRARQQRRIKTQKAPDGTPYAARKRQPVKAKKDRVKREMFAKLRISRFMKATAGNDVAVVEFTGKVQRMVNVHQYGLKDKPSPNSGSVEYPARILLGFSPSDIDFASTKIVNYLSE
>NZ_CP041082.1|WP_123836165.1|1168687_1169233_-|hypothetical-protein
MRKLSKGNEGAIDKKIELMIKVIIRTDSYLNSANTKSTILLSLSSALLVALSVNFKNITGMVIVDSDKAVLAVLISLMIFLLITSIVFSLRGITPYIKPSTVSNTFSFVDISINFHELHLYKERFNSVSKLEYLNELISLNHNLSKALVAKYNKQITAITCIEATAYVLCFSVYMIIIANC
>NZ_CP041082.1|WP_032418456.1|1175427_1177497_-|DUF927-domain-containing-protein
MKRAPFLCKQSPDRTLEVVILAGSLAWETSRIWRKDPEREDDVPPVVLGPDELADLDNLTIIRPDTLYVRVLRTGDIREEELLKIAVKLAHAGVQMARLMSPDGELLEDWSGQLARLRQERPSDILPDHFRLDEEALWFDKLTERRDGESDVQPQRICSPLRVTAITCDSHDDSYGRLLEWHTTTGQLRRWAMPMAMLSGNGEELRRILLENGLTYISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHNGVYVLPDEVIGPGGDNIILQGSHYLTGGFAQAGTLAEWQGQVAALCAGNSRLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTDYWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGKGRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERLYAGMDVRMVQIPSDTGNHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWLAFLTHDQDASTTLARELLRRYQTALMPENAGNQVQRIVARFALLAVAGEMATLQGITGWQEGTAYGAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASWDGPDRPLNMVGFRRVEKDPLTGEEYTLFHILPEGWREMCRGFSPARAARLCLEAECLLPGSDGKYQSQVRLPEIGKARVYRLTSRILSI
>NZ_CP041082.1|WP_032418458.1|1177532_1177748_-|AlpA-family-transcriptional-regulator
MKTRADNNDAFPESGNVRMRQVVQFLAMSESSVYRLIKDTDFPRPVHLSSRLVVFDAAEIRQWQQRRAAIR
>NZ_CP041082.1|WP_140561723.1|1178229_1182033_-|DNA-binding-protein
MALLDKIKSLISANETATQNIEEESVYDTLTPKIITDSSVKHYFDALDFAFSKQDVKNIAITGPYGAGKSTVIQSYLKTHLNREFINVSLADFSLSGKSDEAPLENSEIELSILQQILYKENKDNLPDSRIDRIQNRNKKHISSLFLTVLSVVAPLLLLAITIFPKYFFSLFGATEPTINVIVNMFPERFFVSIIMGLLCLFFIVRVASKAGIFDKKIKLSKIAFLQGSADMASQESSSLLNNCLDEIVYFFSRSQYKIVVFEDLDRLGNAEVFVKLREINQIVNNNLQSEPVRFIYACRDDIFLGADIRTKFFDFILPVIPVMDARNAYTHLKNKLYDFPENEQPLLKQMSLYISDMRSLQNIVNEFNLFKKVVDDNTNQAKIFALIFYKNIYAQDYNLTDKKSGVLYSFIHNYRLRKLHENHFKLLDQRLEELNNKLVKIRKESVSTDAELRKQIISRFISPELWPIVYFIKDTGNYHQRYIKFSAESFYNSEHEFINYFEQNSSLYIGYPFNGNQHQLAKIDSTSIIEEYKQRNILISSNRDDAYKKTTKEIEELKENIRTRNAISLANLLKIIGWENFRTIAEEYIATCDDRTIIDPEQLETIRNGFRFGGFEALYYLLTNGYIMQDFMMFRSIFNQGTISANDNDYIKAVGRYIGCEEANQTFLLDNSKDVLAELVGQHYQYREGALHHQIIAFLLDSQDNQDHKTLSAMIAMIFRQPASVIIAIFKILEDRFINVDYFTRLVVSSLSENKYLDKMISVLKEQEHNAISKSIASKMIALVSPDISTDQKNYQKFIEDLGFSLVSEVEPNNLQYFLHNIEQLQVIYHDIYLPVTPNEMKALNFIGDHQMYPLDRATYRVVVAGLLQSDNVTCEMVDDLPWSLLDKHQLSKIKVYVNDNINIFVKDIFIDSKESSNAIVSVITHSDLSDELKILILEKMQFTVTGLNEFPEYIDVDGNELSYHDLFYRYDHVTPGWEALLAYICEECNLEILTQYIENYADVLSQEAINLMEGDRYDLLYMKVICNDNLSDSAYAAILEPVYINTHHWDERMSLKNLYRLIKNRKIELDPETFKQAIQYFISNNDLKRIEPFVLWFSQFKDNFFPNIEYYLCVNQDDVFFKESLIGINNSHVFTLQEKSSILFKCREHYELSLFEELTISNEGLIALVNTSTDDNFSIYVIIKLLKNGYRSRTEIAHFVSRLEEKEYTKIFYQKSATLNLDKPQEAELFLSALQQANLIKKWTLRDVGKYYVQCRYEEDESYLD
>NZ_CP041082.1|WP_140561725.1|1182409_1183333_+|IS5-family-transposase
MAKQKFKITNWPTYNKALINRGSITFWLDDEAIQAWYESATPSSRGRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFTLMNVPLRCPDYTSVSKRAKSVNVSFKTFTRGEIAHLVIDSTGLKVFGEGEWKVKKHGKERRRIWRKLHLAVDSKTHEIICADLSLNNVTDSEAFPGLIRQTHRKIRAASAGGAYDTRLCHDELRRKKISALIPPRKGAGYWPGEYADRNRAVANQRLTGSNARWKWTTDYNRRSIAETAMYRVKQLFGGSLTLRDYDGQVAEAMALVRALNKMTKAGMPESVRIA
>NZ_CP041082.1|WP_002914164.1|1185856_1186339_-|SsrA-binding-protein-SmpB
MTKKKAHKPGSATIALNKRARHEYFIEDEYEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAFLFGANFTPMAVASTHYVCDPTRTRKLLLNQRELDTLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRTDLKDREWALDKARIMKHAGR
>NZ_CP041082.1|WP_071549035.1|1186449_1186926_+|type-II-toxin-antitoxin-system-RatA-family-toxin
MILFALCLNVEPAMPQISRTALVPFSAEQMYQLVNDVKSYPDFLPGCTGSRVLEFGPTQMTAAVDVSKAGISKTFTTRNTLTSNQSILMSLVDGPFKKLIGGWKFIPLSPEACKIEFHLDFEFTNKLIEMAFGRVFKELAANMVQAFTSRAKEVYSAS
>NZ_CP041082.1|WP_004145682.1|1186915_1187206_+|RnfH-family-protein
MPANIRVEVAYALPEKQYLQRVTLDEGATVEQAIIASGLLALRDDIDLAKNKLGIYSRPVKLHDEVHDGDRVEIYRPLIADPKELRRQRAEKSAAK
>NZ_CP041082.1|WP_002914160.1|1187272_1187614_-|outer-membrane-protein-assembly-factor-BamE
MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLAPNDVAKIRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQEPGHQKVTQQTLTLTFNSGGVLTNIDNKPALTSQ
>NZ_CP041082.1|WP_004174799.1|1187761_1189423_-|DNA-repair-protein-RecN
MLAQLTISNFAIVRELEIDFHSGMTAITGETGAGKSIAIDALGLCLGGRAEADMVRRGATRADLCARFALKDTPAAQRWLEENQLESGRECLLRRVISADGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKTLLDGYTGEYALTQRMAEHYRQWHQSCRELAQHQQQSQERAARADLLQYQLKELNEFNPLPGEFEQIDEEYKRLANSGQLLSTCQHALTVLADGEEANLQSQLYTAKQLVSELVGMDSKLSGVLDMLEEAAIQLSEASDELRHYHDRLDLDPNRLFELEQRISRQIALARKHQVMPEELPAVYQAMLEEQRLLDDSAGSLESLSQQVVEHHQLALETARQLHALRQASADELTQLITESMHSLSMPHGVFAIEVAFDERHLTADGADHIEFRVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHHHFFVCKETDGEMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA
>NZ_CP041082.1|WP_002914158.1|1189509_1190388_-|NAD(+)-kinase
MKNHFKCIGIVGHPRHPTALTTHEMLWRWLCSKGYEVLVEQQIAHELQLSNVKTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGNLGFLTDLDPDNALQQLADVLEGHYIAEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMIEFEVYIDEVFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINGDSTIRLRFSHRCSDLEISCDSQIALPIQDGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP041082_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041082_2

1762031-1762293

Orphan

Consensus_repeat	Method
AGCGCCATCAGGCAGTGTGGCGGCTACGCCTGACCCGGCCTGGATTATACGGTGGGTGTGA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP041082_2

>merge|NZ_CP041082|2|1762031-1762293|PILER-CR
AGCGCCATCAGGCAGTGTGGCGGCTACGCCTGACCCGGCCTGGATTATACGGTGGGTGTGATACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGAAGCGCCATCAGGCAGTGTGGCGGCTGCGTCTGACCCGGCCTGGATTATACGGTGGGTGTGATACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGAAGCGCCATCAGGCAGTGTGGCGGCTACGCCTGACCCGGCCTGGATTATACGGTGGGTGTCA

>NZ_CP041082|2|1|1762031-1762293|PILER-CR
AGCGCCATCAGGCAGTGTGGCGGCTACGCCTGACCCGGCCTGGATTATACGGTGGGTGTGA	TACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGA
AGCGCCATCAGGCAGTGTGGCGGCTGCGTCTGACCCGGCCTGGATTATACGGTGGGTGTGA	TACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGA
AGCGCCATCAGGCAGTGTGGCGGCTACGCCTGACCCGGCCTGGATTATACGGTGGGTGTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041082.1\|WP_001741945.1\|1764863_1765754_+\|GalU-regulator-GalF	unknown	unknown	gnl\|CDD\|182252
NZ_CP041082.1\|WP_032418667.1\|1770904_1773073_+\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|183173
NZ_CP041082.1\|WP_140561731.1\|1775856_1776459_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133017
NZ_CP041082.1\|WP_004151145.1\|1759415_1759997_+\|dCTP-deaminase	unknown	unknown	gnl\|CDD\|274062
NZ_CP041082.1\|WP_032418661.1\|1760027_1761875_+\|outer-membrane-assembly-protein-AsmA	unknown	unknown	gnl\|CDD\|236772
NZ_CP041082.1\|WP_032419448.1\|1770452_1770890_+\|protein-tyrosine-phosphatase	unknown	unknown	gnl\|CDD\|182256
NZ_CP041082.1\|WP_032418660.1\|1757720_1758569_+\|DNA-3-methyladenine-glycosylase-2	unknown	unknown	gnl\|CDD\|236671
NZ_CP041082.1\|WP_004151141.1\|1753368_1754070_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP041082.1\|WP_032418658.1\|1750716_1751991_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|224220
NZ_CP041082.1\|WP_009483956.1\|1752264_1752876_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|197715
NZ_CP041082.1\|WP_077261140.1\|1774601_1775669_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|211420
NZ_CP041082.1\|WP_004151143.1\|1756230_1757583_-\|molecular-chaperone	unknown	unknown	gnl\|CDD\|236954
NZ_CP041082.1\|WP_032418664.1\|1767735_1769169_+\|capsule-assembly-Wzi-family-protein	unknown	unknown	gnl\|CDD\|379441
NZ_CP041082.1\|WP_004146563.1\|1752990_1753131_-\|small-membrane-protein	unknown	unknown	unknown
NZ_CP041082.1\|WP_032418662.1\|1766146_1766776_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|214471
NZ_CP041082.1\|WP_032419447.1\|1754084_1755941_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP041082.1\|WP_032418666.1\|1769313_1770447_+\|polysaccharide-export-protein	unknown	unknown	gnl\|CDD\|237903
NZ_CP041082.1\|WP_134934466.1\|1773560_1774400_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041082.1\|WP_004151147.1\|1762514_1764098_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP041082.1\|WP_002912442.1\|1758683_1759325_+\|uridine-kinase	unknown	unknown	gnl\|CDD\|235492

Protein	Function_ID	Function_description	E-value
NZ_CP041082.1\|WP_001741945.1\|1764863_1765754_+\|GalU-regulator-GalF	gnl\|CDD\|182252	PRK10122, PRK10122, UTP--glucose-1-phosphate uridylyltransferase GalF.	0
NZ_CP041082.1\|WP_032418667.1\|1770904_1773073_+\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|183173	PRK11519, PRK11519, tyrosine-protein kinase Wzc.	0
NZ_CP041082.1\|WP_004151145.1\|1759415_1759997_+\|dCTP-deaminase	gnl\|CDD\|274062	TIGR02274, Probable_deoxycytidine_triphosphate_deaminase, deoxycytidine triphosphate deaminase. Members of this family include the Escherichia coli monofunctional deoxycytidine triphosphate deaminase (dCTP deaminase) and a Methanocaldococcus jannaschii bifunctional dCTP deaminase (3.5.4.13)/dUTP diphosphatase (EC 3.6.1.23), which has the EC number 3.5.4.30 for the overall operation. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	1.60713e-93
NZ_CP041082.1\|WP_032418661.1\|1760027_1761875_+\|outer-membrane-assembly-protein-AsmA	gnl\|CDD\|236772	PRK10833, PRK10833, putative assembly protein; Provisional.	0
NZ_CP041082.1\|WP_032419448.1\|1770452_1770890_+\|protein-tyrosine-phosphatase	gnl\|CDD\|182256	PRK10126, PRK10126, low molecular weight protein-tyrosine-phosphatase Wzb.	1.31442e-66
NZ_CP041082.1\|WP_004151141.1\|1753368_1754070_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.98041e-36
NZ_CP041082.1\|WP_032418658.1\|1750716_1751991_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|224220	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion].	5.58793e-108
NZ_CP041082.1\|WP_009483956.1\|1752264_1752876_-\|response-regulator-transcription-factor	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	0.00203687
NZ_CP041082.1\|WP_077261140.1\|1774601_1775669_+\|hypothetical-protein	gnl\|CDD\|211420	cd11579, Glyco_tran_WbsX, Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases. Members of this domain family are found in proteins within O-antigen biosynthesis clusters in Gram negative bacteria, where they may function as glycosyl hydrolases and typically co-occur with glycosyltransferase domains. They bear resemblance to GH71 and the GH99 family of alpha-1,2-mannosidases and may share a similar cataltyic site and mechanism. The O-antigens are essential lipopolysaccharides in gram-negative bacteria's outer membrane and have been linked to pathogenicity.	4.85027e-35
NZ_CP041082.1\|WP_004151143.1\|1756230_1757583_-\|molecular-chaperone	gnl\|CDD\|236954	PRK11678, PRK11678, putative chaperone; Provisional.	0
NZ_CP041082.1\|WP_032418664.1\|1767735_1769169_+\|capsule-assembly-Wzi-family-protein	gnl\|CDD\|379441	pfam14052, Caps_assemb_Wzi, Capsule assembly protein Wzi. Many bacteria are covered in a layer of surface-associated polysaccharide called the capsule. These capsules can be divided into four groups depending upon the organisation of genes responsible for capsule assembly, the assembly pathway and regulation. This family plays a role in group 1 capsule biosynthesis. It is likely to be involved in the later stages of capsule assembly. It is likely to consist of a beta-barrel structure.	1.13171e-133
NZ_CP041082.1\|WP_032418660.1\|1757720_1758569_+\|DNA-3-methyladenine-glycosylase-2	gnl\|CDD\|236671	PRK10308, PRK10308, 3-methyl-adenine DNA glycosylase II; Provisional.	1.93566e-179
NZ_CP041082.1\|WP_032418662.1\|1766146_1766776_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|214471	smart00014, acidPPc, Acid phosphatase homologues.	9.62171e-17
NZ_CP041082.1\|WP_032419447.1\|1754084_1755941_-\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.38058e-41
NZ_CP041082.1\|WP_032418666.1\|1769313_1770447_+\|polysaccharide-export-protein	gnl\|CDD\|237903	PRK15078, PRK15078, polysaccharide export protein Wza; Provisional.	0
NZ_CP041082.1\|WP_140561731.1\|1775856_1776459_+\|glycosyltransferase	gnl\|CDD\|133017	cd02526, GT2_RfbF_like, RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.	5.55283e-06
NZ_CP041082.1\|WP_004151147.1\|1762514_1764098_-\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	9.01248e-99
NZ_CP041082.1\|WP_002912442.1\|1758683_1759325_+\|uridine-kinase	gnl\|CDD\|235492	PRK05480, PRK05480, uridine/cytidine kinase; Provisional.	1.7406e-147

>NZ_CP041082.1|WP_032418661.1|1760027_1761875_+|outer-membrane-assembly-protein-AsmA
MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLDLDGPLRWHVWPQLSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAVRDSSAPVVPHDNTLPLAPEDRGWSYDVRQLQVADSVLFFQHENGEQVTVRDIRLQMEQDENHRATVDFSGRVNRDQRDLALNFSATVQGGDYPHSLKADFTQLSWQLRGAELPPDGINGQGSLQASWQEDDKTLRFDNLNLMANRSTVTGSGSVVLGDRPDWSLDLHATTLDLDSLLAQRSPATDSSASQQGQSQTRPLRPVIADSDEREDYQSLRGFNGRMALSADQLQWRGLNFTQVQSEISNQQGLLTVSKMQGNLDGGQLSLPGTLDARGDTPLATFQPALQNVEIGSLIKAFNYSLNLTGKLSLSGEFSGTRIDADDFRRHWQGQAQLQMADTRTEGLNFQQLVQQAVERSTNVRAQDNYDNATRLDSVSSRLTLDNGLVTLNRLQGQSDVMAMTGEGQLDLQKENCDMRFNVRVLGGWKGEGKLIDRLKQTAIPLRIYGEWQSLSYSLQVDQILRKQLQDEAKQRLNDWVERNKGSKDGNDAKKLLDKL
>NZ_CP041082.1|WP_004151145.1|1759415_1759997_+|dCTP-deaminase
MRLCDRDIEAWLDEGRLAINPRPPVERINGATVDVRLGNKFRTFRGHTAPFIDLSGPKAEVSAALDRVMSEEIVLPEGEAFFLHPGELALAVTYESVTLPADLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMPIGALSFEPLSGPAARPYNRREDAKYRDQQGAVASRIDKD
>NZ_CP041082.1|WP_002912442.1|1758683_1759325_+|uridine-kinase
MTDMSHQCVIVGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYYKDQSHLSMEERVKTNYDHPSSMDHSLLFQHLQMLKSGQPIELPVYSYVEHTRTPNTIHVEPKKVIILEGILLLTDARLRNELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
>NZ_CP041082.1|WP_032418660.1|1757720_1758569_+|DNA-3-methyladenine-glycosylase-2
MVLLPWTPPYDWAWMVGFLQARAVAGVERFHDGGYSRSFGVEGHRGLIHLAPDEEAQGLRVTLSPGLQPVAEICYARIGQLFDLACDPRQVARTLGDLPQARPGLRLPGALDAFEQAVRAVLGQLVSVAMAARLTAKVAAGWGEPLAEAPGYVLFPTPEALSRADPQALKALGMPLRRAEALIHLARAALNGELPLTAPADIDAGLRQLQTLPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAAIARYARRWQPMRSYALLHIWYTDDWAPAAE
>NZ_CP041082.1|WP_004151143.1|1756230_1757583_-|molecular-chaperone
MFIGFDYGTANCSVAVMRENTPQLLTLENGSALLPSMLCAPTREAVSEWLYRHHDVPTHSDENQALLRRAIAANRDEDIEVLRNSVQFGLASLQQYVEDPEEVYFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIKLQAESQLPEQIDQAVIGRPINFQGLGGDEANAQAQGILERAAHRAGFRDVVFQFEPVAAGLDFEATLSEEKRVLVVDIGGGTTDCSLLLMGPQWRERADRQQSLLGHSGCRIGGNDLDIALAFKCLMPLLGMGGETEKGTALPILPWWNAVAINDVPAQSDFYSTANGRLLNDLLRSARDADKVALLLKVWRQRLSYRLVRSAEESKIALSSAASVETALPFIQDDLATAIAQQGLEAALDQPLTRIMEQVRLALDSSQTTPDVIYLTGGSARSPLIKKALAAQLPGIPLAGGDDFGSVTAGLARWAQVVFR
>NZ_CP041082.1|WP_032419447.1|1754084_1755941_-|sensor-histidine-kinase
MLLVAPQAQAATRQVGIDIPVQWYADASGQMTLDRFAALPTDQLATTRQIPSFGYSRKTWWLRSELPGTWFAGEPRWLQLGPSFVDHLTIYYRPLGSDAPWAQRTFGDRDGARESDLHYRESVLILPPPPTAAGYEVVFRLQSTSTLILLASLSSPQEFVQRATADTAFWSFYFGLAAVASGVALWLALALRRRLLWGICLFSLNYPLVAALHGFPEWFFGHAALPFQDFMISSLSLFSYATALWLHSEIFDLKKNMPRLHQLLIAAVILNLVLQVSIPLGFYGFAMQIEGVVFIIITPVLLFTSWWLWRKKAIDRTTLLLGLLPPFYVVAAVLVQLSIHGIIPFHMAIYSLWQYALIVHIITVLIIAILRVRAENRQLEQKQRLARELQIEREASFHQRQFMGMVAHEFRTPLAVIQAALENLRLSAASTSQEARFDRIGRAATRLVQLTDNCLADARLASHDLHVERQQTALLTVINMAASVVAISHDHYLNIRQHGAVESPQLQADAGLLCIAIANLLDNAVKYSPPGEIAIDIHSDAGQTELRIRDHGPGLPAGQAELIFERYRRGEHTSPVPGGTGLGLYVARQIVQAHDGKLWLAEHGPDGCTFILTLPTVA
>NZ_CP041082.1|WP_004151141.1|1753368_1754070_-|response-regulator-transcription-factor
MALRLAIIEDNADLLDELLAWLGYRGFEVWGTRSAEAFWRQLHSHPVDIVLVDIGLPGEDGFSVLNYLHELGHYGLVVVSARGQQQDKLQALSLGADAYLIKPVNFAHLAETLTALGARLRQDRPAAPPAEAIGTPPAVSPGSWRLQEDKLISPDARTLELTQQEYRLVELLMRNRNEVCSKLDLHACLFSHESEPDLHRIDVVVSRLRHKARQQGIHLPVRAIFGKGLAFIS
>NZ_CP041082.1|WP_004146563.1|1752990_1753131_-|small-membrane-protein
MAMQTWLVLLLCIFFFSISVYSFISYLKDRRRQKFTFNDKRSMRRK
>NZ_CP041082.1|WP_009483956.1|1752264_1752876_-|response-regulator-transcription-factor
MRNINVTINTRNAFVRESLVAMVNDLTRGDLRARFSWRNTDLSAEDIIICEVIPGEIYLCNTLIKNRKRGSSLIILHSYDQLPEDEFMINCLKGVIFVSLKTASIPQLLTIIKSELQHCMTPTATDAAGRELSCASCPHRVLSRSQTAVVHGILEGLDMSKIAALQRVSPRTAAYHKNKIMEKYSLNNNHEFFQFMNLLRERW
>NZ_CP041082.1|WP_032418658.1|1750716_1751991_+|dicarboxylate/amino-acid:cation-symporter
MANANKLTLFIVIFMLMGILSGAAIHAYATPTTISAWADNITLLTDLFLRLIKMVIAPLVFSTLTVGIMRLGETATIGRVGGKAMVWFITSSVLSILVGLVIVTFQHPGAGLNLAVPKEAVDTGLAVSGMSLKGFLSHTIPTSITEAMANNEILQIVVFSMFFGIAGASLGEKFNAPLVAALNVVSHIMLKVTGYVMYVAPLAIFAAISSVIASQGLGILLNYASFIGGYYLAVLLTSSVLIAVGYMVLKKEVFRLLNMLKDPVLVAFTTSSSEAAYPKTLERLVKFGCSRNIVSFVLPIGYSFNLVGSMVYCSFAAMFIAQAYNVPLSFSEITVMMLTLMLASKGIAGVPRSALVVLAATIPSFNIPVAGILLLMGIDHFLDMGRSAINVLGNGIATAMLSKNEGLLTDEEAQPDWEVEKAEA
>NZ_CP041082.1|WP_004151147.1|1762514_1764098_-|TerC-family-protein
MEWIADPSIWAGLVTLVVIELVLGIDNLVFIAILAEKLPPAQRDRARITGLMLAMVMRLLLLASISWLVTLTKPLIVFHDFSFSARDLIMLFGGLFLLFKATVELNERLEGKDSDNPTQRKGAKFWAVVAQIVVLDAIFSLDSVITAVGMVDHLAVMMAAVVIAISLMLMASKALTRFVNSHPTIVILCLSFLLMIGFSLIAEGFSFIIPKGYLYAAIGFSVMIEALNQLAQFNRRRFLSANMTLRQRTTEAVMNLLSGQKEKAELDADTASLVADQDQHPLFNPQERLMIERVLNLNQRSVSSIMTSRHDIERINLSAPEEEIRSLVEKNQHTRLVVTGGKDNEDLLGVVHVIDLLQQSLRQEPLDLQALVRQPLVFPEGLPLLSALEQFRQARTHFAFVVDEFGSVEGIVTLSDVMETIAGNLPNEVEEIDARHDIQHHQDGSWTVNGHMPLEDLVQYVPLPLDDKREYHTVAGLLMEYLQHVPQVGETIEIDGYTLRTLQVDSHRVQKVQIVPPVKQDELDYEV
>NZ_CP041082.1|WP_001741945.1|1764863_1765754_+|GalU-regulator-GalF
MANLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEIVLVTHSSKNAVENHFDTSYELEALLEQRVKRQLLAEVQAICPPGVTIMNVRQAQPLGLGHSILCARPVVGDNPFVVVLPDIILDGGTADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTKEPMVAEGQVARIVEFIEKPDEPQTLDSDLMAVGRYVLSADIWAELERTEPGAWGRIQLTDAIAELAKKQSVDAMLMTGESYDCGKKMGYMQAFVTYGMRNLKEGAKFRESIKKLLA
>NZ_CP041082.1|WP_032418662.1|1766146_1766776_+|phosphatase-PAP2-family-protein
MNWQLISFFGDSTVLLPSAAALFIVLMLRKTSRLLAWQWGLLFGITGAIVCASKLAFMGWGLGIRELDYTGFSGHSALSAAFWPIFLWLLSARFSVGLRKAAVITGYVLAAVVGYSRLVIHAHSVSEVIAGLLLGAAGSALFLVLQKRTSDPESVNISWGGVACLVMVPLILLHSGSKAPTQSLLGQIATAVGPLDKPFTRTDLHKQVW
>NZ_CP041082.1|WP_032418664.1|1767735_1769169_+|capsule-assembly-Wzi-family-protein
MIKIARIAATLGLLSSLGAQAYAAGLVVNDNDLRNDLAWLSDRGVIHLSLSTWPLSQEEISRALKKAKPSYSSEQVVLARINQRLSALKADFRVTGYTSTDQPGTPQGFGQTQPADNSLGLAFNNSGEWWDVHLQGNVEGDERISNGSRFNANGAYGAVKFWNQWLSFGQMPEWWGPGYEGSLIRGDAMRPMTGFLMQRAEQAAPETWWLRWVGPWQYQISASQMNQYTAVPHAKIIGGRFTFSPFQSLELGASRIMQWGGEGRPQSFSSFWDGFTGKDNTGTDNEPGNQLAGFDFKFKLEPTLGWPVSFYGQMIGEDESGYLPSANMFLGGVEGHHGWGKDAVNWYVEAHDTRSNMSRTDYIYTHHIYKDGYYQQGYPLGDAMGGDGQLIAGKVELITEDNQRWSTRIVYAKVNPENQSINKAFPHADTLKGVQLGWSGDVYQSVRLNTSLWYTNADNSDRDDVGASAGIEIPFSL
>NZ_CP041082.1|WP_032418666.1|1769313_1770447_+|polysaccharide-export-protein
MKKKIVRFSALALAIGFLSGCTIIPGQGLNSLRKNVVELPDSDYDLDKLVNVYPMTPGLIDQLRPETVLARPNPQLDNLLRSYEYRIGVGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNSDGTIFYPYIGKLQVAGKTISQVRQDIASRLTTYIESPQVDVSIAAFRSQKTYVTGEVVKSGQQPITNIPLTVMDAINNAGGLAPDADWRNVVLTHNGKDTKISLYALMQKGDLSQNHLLYPGDILFVPRNDDLKVFVMGEVVKQATMKMDRSGMTLAEALGNAEGISQEMSDATGVFVIRQLKDDKQGKIANIYQLNAQDASAMVLGTEFQLQPYDIVYVTTAPLVRWNRVISQLVPTITGVHDMTETGKFIRTW
>NZ_CP041082.1|WP_032419448.1|1770452_1770890_+|protein-tyrosine-phosphatase
MLNSILVVCTGNICRSPIAERFLRQGLPNMKIDSAGTGALIGHEADESAVKIAAFHGLSLDGHKGQQFTSSLGRHYDLILVMEKKHLEQISQISPEARGKTMLFGHWLGSRDIPDPYHKSEEAFSSVYQLIEQSGLRWIEKIGAK
>NZ_CP041082.1|WP_032418667.1|1770904_1773073_+|polysaccharide-biosynthesis-tyrosine-autokinase
MSSVNNKLITNDADEIDLGRLLGELVDHRKLIIAVTSLFTLCALIYALFATPIYQADALIQVEQKQANAILSNLSQMLPDSQPQSEPEIALLKSRMILGKTVDDLNLQAVIKPKYFPIFGRGWQRLSGKKDGELVVSRLYLPTSEDIDVPKVELTVKDNEHFVVKGDDFTFNGKVGELLDDKGISIKVDKIDAEPGSKFTISYITRLEAITKLQEVLSVADQGKDTGILVLSITGDNPELITNIIDSISNNYLSQNIARQAAQDAKSLEFLSNQLPKVRNDLDVAEDKLNEYRRKNDSVDLSLEAKSVLEQIVNVDNQLNDLTFRESEISQLYTKEHPNYKALMEKRKTLQEEKAKLNKRVSVMPETQQEILRLSRDVESGRAVYMQLLNRQQELNIAKSSAIGNVRIIDNAVAQTKPVKPKKIVIILIGFIFGSVVAIGIVLLRVFLRRGIESPEQLEELGINVYASIPVSEAFANNAVKKASWKNKNYDIKQAFLAVENPADLAIEAIRGLRTSLHFAMMESRNNILMISGASPNAGKTFVSTNLAAVIAQSGKKVLFIDTDMRKGYTHNLFNVENTKGLSDILSGKMTVERAIQPLSMAGFDFIARGAVPPNPAELLMHKNFDALLSWASQNYEIVVLDTPPILAVTDAAIIGNYVGTTLLVARFEQNTAKEIEVSVRRFEQSGVIVKGCILNGIIKKASSYYSYGYNHYGYTYTDNKK
>NZ_CP041082.1|WP_134934466.1|1773560_1774400_+|hypothetical-protein
MAKDNSISRIILDWRDTVAPVLIMYLMVRTNVINFDDGDRILHFIALMVVGNSIIAIIDYYNFNGIAESSWRYDFLIDLNLKTDSDYESRMVVYQIVRNGNLRSSGLFVSALQYSYIAGMFCFYFYLKLLNSLKWLNFSGLALSLISMIICLAGVYVSQVRTAFLIIIFNILFYHLCLSYKNNFSFKPKLTMSLAVICSVVMFYAIYYLGESADASSYGRLAQYAIMISDFNPLGAGLGAYKGLFDSFYVYIILTLGAPSIYFIYFFVKRYIYIFSRKI
>NZ_CP041082.1|WP_077261140.1|1774601_1775669_+|hypothetical-protein
MIRLFLSQPRVFFIFIFFLISQAKAGSLDVGVYYYPGWNKPGVEVWEPIKKYPEREPILGWYQDGDDNIIQKQLAWMEKYGVTYIAYDWYWDENTGVKNRTFAIDAYLRNSQATNVKFALLWANHTNTPKNSKEFDNIVNYWIDNYFKSSKYFTINRRPVVFVFSPQRLEMDGHKFNMDVPSLLKRARLLGNKKGLKDIYFVASTGYDENNNLIYKYPPNSYDAVSAYNYHIGISNGIPKKNSYSYQELIAGYKYTWNKILSDSDLPYIIPVSSGWDRRPWGGSIPPEHDMSYGNPKEFGNMLSEAKEEIKLHQDKALNNIIICCWNEYGEGSYIEPSKKYGFKFLDEIQKNKNF
>NZ_CP041082.1|WP_140561731.1|1775856_1776459_+|glycosyltransferase
MLKNHQVDVYHYGVNERLSKVYNQLIAKYKSSNDWVVILDDDSVIDDEYIQGVLNFIEACSKNKALIVAFPKIYNNNIMISPGYIKGVRGYLIQDIQHGMVSKKNIVAMMSGTVISLESNVELPRFDERLSFYGVDTKFFLDIDDVNGGKYILPSLLEHNSALRNPAIKNTEYCARLINLFSARKVIFENVPFNQIRLFI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP041082_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041082_3

2232285-2232386

Orphan

Consensus_repeat	Method
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041082_3

>merge|NZ_CP041082|3|2232285-2232386|CRISPRCasFinder
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGACAGCAGAACAGGTGGCTGAGAGAGTGCAGGAATGTGTAGCCTCGCTAAGCGAAGCGCGAGCGAGGAGA

>NZ_CP041082|3|2|2232285-2232386|CRISPRCasFinder
TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGA	CAGCAGAACAGGTGGCTGAGAGAGTGCAGGAATG
TGTAGCCTCGCTAAGCGAAGCGCGAGCGAGGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041082.1\|WP_002910109.1\|2234195_2234654_-\|YchJ-family-protein	unknown	unknown	gnl\|CDD\|234966
NZ_CP041082.1\|WP_032418823.1\|2224127_2227871_+\|nitrate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|227346
NZ_CP041082.1\|WP_002910103.1\|2237993_2238401_-\|DNA-binding-transcriptional-regulator-H-NS	unknown	unknown	gnl\|CDD\|182858
NZ_CP041082.1\|WP_002910107.1\|2235758_2236772_+\|two-component-system-response-regulator-RssB	unknown	unknown	gnl\|CDD\|182652
NZ_CP041082.1\|WP_002910105.1\|2236969_2237872_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|184021
NZ_CP041082.1\|WP_004151854.1\|2233310_2234153_-\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676
NZ_CP041082.1\|WP_002910100.1\|2238962_2239580_+\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
NZ_CP041082.1\|WP_002910108.1\|2234766_2235669_+\|patatin-like-phospholipase-RssA	unknown	unknown	gnl\|CDD\|182352
NZ_CP041082.1\|WP_002910189.1\|2230109_2230787_+\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|273030
NZ_CP041082.1\|WP_004180383.1\|2218203_2219586_+\|YchO/YchP-family-invasin	unknown	unknown	gnl\|CDD\|236661
NZ_CP041082.1\|WP_002910198.1\|2219582_2220233_-\|two-component-system-response-regulator-NarL	unknown	unknown	gnl\|CDD\|182619
NZ_CP041082.1\|WP_004175568.1\|2222333_2223722_+\|NarK-family-nitrate/nitrite-MFS-transporter	unknown	unknown	gnl\|CDD\|184994
NZ_CP041082.1\|WP_004175566.1\|2220243_2222022_-\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX	unknown	unknown	gnl\|CDD\|182581
NZ_CP041082.1\|WP_002910191.1\|2229399_2230110_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|185014
NZ_CP041082.1\|WP_002910193.1\|2227867_2229403_+\|nitrate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|224063
NZ_CP041082.1\|WP_002910097.1\|2239727_2242403_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
NZ_CP041082.1\|WP_004152249.1\|2231787_2232231_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP041082.1\|WP_002910095.1\|2242879_2243527_+\|YchE-family-NAAT-transporter	unknown	unknown	gnl\|CDD\|236850
NZ_CP041082.1\|WP_004189450.1\|2230783_2231680_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP041082.1\|WP_032103886.1\|2242480_2242666_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP041082.1\|WP_002910109.1\|2234195_2234654_-\|YchJ-family-protein	gnl\|CDD\|234966	PRK01617, PRK01617, hypothetical protein; Provisional.	7.51559e-107
NZ_CP041082.1\|WP_032418823.1\|2224127_2227871_+\|nitrate-reductase-subunit-alpha	gnl\|CDD\|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0
NZ_CP041082.1\|WP_002910103.1\|2237993_2238401_-\|DNA-binding-transcriptional-regulator-H-NS	gnl\|CDD\|182858	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS.	2.61324e-79
NZ_CP041082.1\|WP_002910107.1\|2235758_2236772_+\|two-component-system-response-regulator-RssB	gnl\|CDD\|182652	PRK10693, PRK10693, two-component system response regulator RssB.	0
NZ_CP041082.1\|WP_002910105.1\|2236969_2237872_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|184021	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU.	0
NZ_CP041082.1\|WP_004151854.1\|2233310_2234153_-\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	4.09997e-176
NZ_CP041082.1\|WP_002910100.1\|2238962_2239580_+\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	1.66434e-117
NZ_CP041082.1\|WP_002910108.1\|2234766_2235669_+\|patatin-like-phospholipase-RssA	gnl\|CDD\|182352	PRK10279, PRK10279, patatin-like phospholipase RssA.	0
NZ_CP041082.1\|WP_002910189.1\|2230109_2230787_+\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|273030	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain., respiratory nitrate reductase, gamma subunit. Involved in anerobic respiration the gene product catalyzes the reaction (reduced acceptor + NO3- = Acceptor + nitrite). Another possible role_id for this gene product is in nitrogen fixation (Role_id:160). [Energy metabolism, Anaerobic].	2.8765e-130
NZ_CP041082.1\|WP_004180383.1\|2218203_2219586_+\|YchO/YchP-family-invasin	gnl\|CDD\|236661	PRK10177, PRK10177, YchO/YchP family invasin.	0
NZ_CP041082.1\|WP_002910198.1\|2219582_2220233_-\|two-component-system-response-regulator-NarL	gnl\|CDD\|182619	PRK10651, PRK10651, transcriptional regulator NarL; Provisional.	1.26442e-140
NZ_CP041082.1\|WP_004175568.1\|2222333_2223722_+\|NarK-family-nitrate/nitrite-MFS-transporter	gnl\|CDD\|184994	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional.	0
NZ_CP041082.1\|WP_004175566.1\|2220243_2222022_-\|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX	gnl\|CDD\|182581	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX.	0
NZ_CP041082.1\|WP_002910191.1\|2229399_2230110_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|185014	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone.	1.14838e-83
NZ_CP041082.1\|WP_002910193.1\|2227867_2229403_+\|nitrate-reductase-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
NZ_CP041082.1\|WP_002910097.1\|2239727_2242403_-\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
NZ_CP041082.1\|WP_004152249.1\|2231787_2232231_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.05574e-32
NZ_CP041082.1\|WP_002910095.1\|2242879_2243527_+\|YchE-family-NAAT-transporter	gnl\|CDD\|236850	PRK11111, PRK11111, YchE family NAAT transporter.	5.03226e-138
NZ_CP041082.1\|WP_004189450.1\|2230783_2231680_-\|DMT-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	3.2204e-15

>NZ_CP041082.1|WP_004152249.1|2231787_2232231_+|Lrp/AsnC-family-transcriptional-regulator
MNDVLDEIDRAILTCLTQDARVSLKVLSARVGLTSPSTAERVKRLEERGVIQGYGARVNLAALGYSLQALVRVRPLPGLLQKVDKYIQAMPECIESDKVTGEDCFVMRLVVRDIAQLDTLLDGLAEYAQCNTSVVKSSPVKRRLPPL
>NZ_CP041082.1|WP_004189450.1|2230783_2231680_-|DMT-family-transporter
MQLTRGVWQMSLAMIISGSIGAFVLLSGLPVTDVVFWRCLIGALTLLVFIVLSRQPFSRLTRFTLALAVIGGAALVVNWLLLFAAYSRISIGMATVVYNTQPFMLVLMGMVLGERVSAVKWGWLLLAFGGVVILLSSELMPAHEEGLTTGVLLALGAAFFYALTAIIARKLHPLPAQHIAFIQVLVGVVMLLPLVHAPELTASFPWRYLLILGIVHTGIMYQLLYSAIQKLPTPVTGSLSFIYPLVAMVVDYLVFHHALSAVQLLGGMLILFAAAGNNLGWGEKKPRRGGVSEQSRAS
>NZ_CP041082.1|WP_002910189.1|2230109_2230787_+|respiratory-nitrate-reductase-subunit-gamma
MHFLNMFFFDIYPYIAGSVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFAGHFLGMLTPHWMYESFLPIDVKQKMAMIAGGACGVMTLVGGLLLLKRRLLSPRVRATTTGADILILSLLMVQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDGVAFIFRVHLVLGMTLFLLFPFSRLVHIWSAPVEYLTRKYQIVRARR
>NZ_CP041082.1|WP_002910191.1|2229399_2230110_+|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MIELVIVSRLLEYPDAALWQHQQEMFEALASSEKLSKEDAHALGVFLRDLVAQDPLDAQAAYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLMAQYERHGLLLDSHELPDHLPLYLEYLAQLPEEEALGGLRDVAPILGLLSARLQQRESRYAVLFELLLKLANTQVDSQKVAEKIADEARDDTPQALDAVWEEEQVKFFADQGCGESEISAHQRRFAGAVAPQYLNISNGGQQ
>NZ_CP041082.1|WP_002910193.1|2227867_2229403_+|nitrate-reductase-subunit-beta
MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGMEYAWFNNVESKPGVGFPNDWENQEKWKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDYDYQNLHNAPESKHQPIARPRSLITGQRMDKITSGPNWEEILGGEFEKRAKDQNFDNMQKAMYGQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIESGMPTVCSETCVGRIRYLGVLLYDADAIENAASTENEKDLYQRQLDVFLDPNDPKVIEQALKDGVPQGVIEAAQQSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLANLLTAGDTQPVLLALKRMLAMRHYKRAETVDGVVDTRALEEVGLSEAQAQEMYRYLAIANYEDRFVVPSSHREQAREAFPEKNGCGFSFGDGCHGSDSQFNLFNSRRIDAIDVTSKTEPHA
>NZ_CP041082.1|WP_032418823.1|2224127_2227871_+|nitrate-reductase-subunit-alpha
MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLMRKRLMKMWREAKVQHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTVKTYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPMTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAITPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDKPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRTLRASDLVDSLGQENNPEWKTVAFDEKGDMTVPNGSLGFRWGDKGKWNLEQRDGKTGEEIELRLSLLGSHDEVANVGFPYFGGEGSEHFNKVDLENILLHKLPAKRLQLADGSTALVTTVYDLTMANYGLERGLNDDNCAAGYDEVKAYTPAWAEKITGVSRAHIIRTAREFADNADKTHGRSMIIVGAGLNHWFHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAQELLSPMADKSRYSGHLIDFNVRAERMGWLPSAPQLGVNPLRIADEAKKAGMTPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEYMLKYLLGTENGIQGKDLGKQGGVKPEEVEWRDNGLDGKLDLVVTLDFRLSSTCLYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESKSDWEIYKGIAKKFSEVCMGHLGKETDVVTLPIQHDSAAEMAQPLDVKDWKKGECDLIPGKTAPHIIPVERDYPATYERFTSIGPLLETIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPKLETAIDAAEMILTLAPETNGQVAVKAWQALSEITGREHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLTGRQSLYQDHQWMRDFGESLLVYRPPIDTRSVKAVMGEKSNGNPEKALNFLTPHQKWGIHSTYSDNLLMLTLSRGGPIVWMSEADAKDLGIEDNDWIEVFNANGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITGQRGGIHNSVTRITPKPTHMIGGYGHLAYGFNYYGTVGSNRDEFVVVRKMKNINWLDGEGNDQVQESVK
>NZ_CP041082.1|WP_004175568.1|2222333_2223722_+|NarK-family-nitrate/nitrite-MFS-transporter
MSQSSLPEKANRSVITDWRPEDPEFWQQRGHRVASRNLWISVPCLLLAFCVWMLFSAVAVNLNKVGFQFTTDQLFMLTALPALSGALLRVPYAFMVPLFGGRRWTAFSTGIMIVPCVWLGFAVQDTSTPFSIFVIISLLCGFAGANFASSMANISFFFPKAKQGGALGVNGGLGNMGVSVMQLVAPLVVSISIFAVFGGNGSEQPDGSMLYLENAAWIWVPFLIIFTLAAWFFMNDLSASKASLSEQLPVLKRLHLWIMALLYLATFGSFIGFSAGFAMLSKTQFPDVQILHYAFFGPFIGALARSMGGAISDRLGGTRVTLVNFVVMAVFCALLFLTLPTNGQGGNFIAFFAVFMVLFLTAGLGSASTFQMISVIFRKLTMDRVKAQGGSEAQAMREAATDTAAALGFISAIGAIGGFFIPKAFGISLDLTGSPAGAMKVFLVFYIACVVITWAVYGRKRQ
>NZ_CP041082.1|WP_004175566.1|2220243_2222022_-|nitrate/nitrite-two-component-system-sensor-histidine-kinase-NarX
MLKRLFTPLTLVNQLALIVLLATIIGVAGMAISARLVNGVQGSAHAINKAGSLRMQSYRLLAAIPLNENDQKLVADMTATVFSPELQNSARRDGQEIQLKALQQYWQLALAPGMQRAVNQAEVAQDVADFVDRIDQLVTAFDHTTEQRIERVVWIHRILAIGMALLLIFTIIWLRARLLRPWKQLLSMARAVSQRDFTQRAHISGRNEMATLGMALNNMSEELAESYAVLERRVQEKTAGLEQKNEILAFLWQANRRLHSSAPLCERISPVLNGLQGLTLLRDIEVRVYDLEDEDNHQEFTCHSDDDCDDKGCYLCPRNLPPLPDGGTTLKWRLSDAHSQYGILLATLPVGRHLSHDQQQLVDTLVEQLTSTLALDRHQEKQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPTESRQLLGQIRNELNTSWAQLRELLTTFRLQLTEPGLRPALEASCQEYSAHFGFTVQLDYQLPPRFVPSHQAIHLLQIAREALSNALKHASATEVTVTVSQRDNQVRLVVADNGRGVPDHAERSNHYGLIIMRDRAQSLRGDCQVRRRETGGTEVIVTFIPEKTFSIQ
>NZ_CP041082.1|WP_002910198.1|2219582_2220233_-|two-component-system-response-regulator-NarL
MSQQERATILLIDDHPMLRTGVKQLISMAPDIQVIGEASNGAQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRVVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALQQAAAGEMVLSEALTPVLAASLRANRATSDRDISQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF
>NZ_CP041082.1|WP_004180383.1|2218203_2219586_+|YchO/YchP-family-invasin
MAVSFRLLPTLTFLLLLPGVPVWALTASDTTRPAQAQDPLPDMGIAPQVDDDARHFAEVAKKFGEASMSDNGLTAGEQAQLFAISKIGNEVSHQLESWLSPWGNANVDLLVDKEGKFTGSKGSWFVPLQDNDRYLTWNQYSVTRREHDLVGNIGLGQRWRVGGWLLGYNSFYDKVLSESLARGSVGAEAWGEYLRLSANYYHPLGDWQLRDNQTQEQRMAAGYDVTAQARLPFYQHINTSVSVEQYFGDSVDLFHSGTGYHNPVAVSVGLNYTPVPLVTVTAKHKQGENGVSQNNVGLKLNYRFGVPLKQQLAADEVAISNSLRGSRFDSPERDNLPVVEYRQRKNLTVYLATPPWDLQSGETVQLKLQIHSLHGIKALHWQGDTQALSLTPPVDASSPDGWSIIMPVWNSEPGAANRWRLSVVVEDKQGQRVSSNEIALALTEPLVKFTTPGVSWTDSP
>NZ_CP041082.1|WP_004151854.1|2233310_2234153_-|formyltetrahydrofolate-deformylase
MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDATLLADLDSALPEGSIRELNPAGRRRVVILVTKEAHCLGDLLMKANYGGLDVDIAAVIGNHDTLRSLVERFGIPFELVSHEGLSREEHDQRMGDAIAAHEPDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYQVLAQRVFVYGNRTIIL
>NZ_CP041082.1|WP_002910109.1|2234195_2234654_-|YchJ-family-protein
MSQLCPCGSALEYSSCCQRYLSGAELAPGPSQLMRSRYSAFVMKDADYLIKTWHPSCQAQQFRAELEKGFSQTEWLGLTLFASDEGRAPNEGFVSFVARFNDNNRPGAIIERSRFLKENGQWYYIDGTRPLIGRNDPCPCGSGKKFKKCCGQ
>NZ_CP041082.1|WP_002910108.1|2234766_2235669_+|patatin-like-phospholipase-RssA
MRKLKIGLALGAGAARGWSHIGVINALQRAGIEIDIVAGCSIGSLVGAAYACNRLPALESWVCSFSNWDVLKLMDLSWRRGGLLRGEKVFNHYRRIMPVTEIERCERRFAAVATNLSTGRELWFTEGDLHLAIRASCSMPGLMSPVRHNGYWLVDGAVVNPVPVSLTRAMGADIVIAVDLQHDAHLMQQDLFSLETPRQEAEEKEGPWHTRLRARLTRMSSRRTAVTPTAMEIMTTSIQVLENRLKRNRMAGDPPDILLQPYCPQVSTLDFHRAGEAIAAGQLAVEKKMDELLPLVRTAV
>NZ_CP041082.1|WP_002910107.1|2235758_2236772_+|two-component-system-response-regulator-RssB
MTQPLAGKQILIVEDEPVFRSLLHGWLTSLGATTFQAEDGKDALHKMTEVHPDLMICDISMPRMNGLELVETLRNRGEQLPILMISATENMADIAKALRLGVQDVLLKPVKDFDRLRETVYACLYPAMFSSRVEEEERLFEDWDALVSNPIAASRLLQELQPPVQQEMSHCRIHYRQLVSADKPGLVLDIAPLSENDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQGQRLPEMGSLLKQVNQLLRQANLPGQFPLLVGYYHSGLKNLILVSAGLNGTLNTGEHQIQISNGVPLGTLGDAYLNQISQRCTSWQCQIWGAGGRLRLMLSAE
>NZ_CP041082.1|WP_002910105.1|2236969_2237872_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MAALNSKVRKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLEEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSRDNLAEMISRFDETGASQIMVEPVEDVTAYGVVDCKGESLKPGESVPMVGVVEKPKADVAPSNLAVVGRYVLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHKTLGDDFKAWLETAVAK
>NZ_CP041082.1|WP_002910103.1|2237993_2238401_-|DNA-binding-transcriptional-regulator-H-NS
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEENAAAAEIEERTRKLQQYREMLIADGIDPNELLSTMAAVKAGTKTKRAARPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLI
>NZ_CP041082.1|WP_002910100.1|2238962_2239580_+|thymidine-kinase
MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPARLYNPQTSLFDDIAAEHQLKPIHCVLVDESQFLTREQVHELSEVVDTLDIPVLCYGLRTDFRGELFTGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQEGRPYNEGEQVVIGGNERYVSVCRKHYKEALSVGSLTKVQNQHRPC
>NZ_CP041082.1|WP_002910097.1|2239727_2242403_-|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAVTNIAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKEATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFASHGGYLLQGKELKAVQDIILKNGALNAAIVGQPAAKIAELAGFTVPATTKILIGEVTNVDESEPFAHEKLSPTLAMYRAKDFEDAVAKAEKLVAMGGIGHTSCLYTDQDNQPARVAYFGQMMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLTIVRKGADLANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMVAITTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHALEAYVSVLASEFSDGQALQALKLLKEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLESIKAELGIPKSIREAGVQEADFLAHVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGREFVEGEAGAKAEVAPVKAEKKAKKSA
>NZ_CP041082.1|WP_032103886.1|2242480_2242666_+|hypothetical-protein
MHVNVYVEKSGRCFTDLLKKLYLFRFQVLLPSTLLVSSRLLTSEYKLRDLDQVLSLLIPFS
>NZ_CP041082.1|WP_002910095.1|2242879_2243527_+|YchE-family-NAAT-transporter
MTQSLFDFSAYFKFFIGLFALVNPVGIIPVFISMTSYQPAAVRNKTNLTANLSVAIILLTSLFLGDGILQIFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSWVHLVGFSLAIAVFALCCWGIFRMAPWLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKALFPGLLS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP041082_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041082_4

4130608-4130703

Orphan

Consensus_repeat	Method
TGGCACTTTGTTGGCATTCTGTTGGCACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041082_4

>merge|NZ_CP041082|4|4130608-4130703|CRISPRCasFinder
TGGCACTTTGTTGGCATTCTGTTGGCACAACCTCGCCGGTACGCAGCGTGGTTACTGGGTTTGCGTTGGCACTTTGTTGGCATTCTGTTGGCACAA

>NZ_CP041082|4|3|4130608-4130703|CRISPRCasFinder
TGGCACTTTGTTGGCATTCTGTTGGCACAA	CCTCGCCGGTACGCAGCGTGGTTACTGGGTTTGCGT
TGGCACTTTGTTGGCATTCTGTTGGCACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041082.1\|WP_077267115.1\|4128035_4128482_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041082.1\|WP_064147790.1\|4125238_4125694_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182057
NZ_CP041082.1\|WP_060578951.1\|4124437_4125076_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368603
NZ_CP041082.1\|WP_004139615.1\|4131321_4131543_-\|bacteriophage-CII-family-protein	unknown	unknown	gnl\|CDD\|336083
NZ_CP041082.1\|WP_008807814.1\|4133283_4133490_+\|phage-encoded-cell-division-inhibitor-protein	unknown	unknown	gnl\|CDD\|236900
NZ_CP041082.1\|WP_077267114.1\|4126219_4126678_-\|DUF551-domain-containing-protein	unknown	unknown	gnl\|CDD\|367946
NZ_CP041082.1\|WP_055316537.1\|4135595_4136252_+\|DNA-methyltransferase	unknown	unknown	gnl\|CDD\|227069
NZ_CP041082.1\|WP_023342724.1\|4125068_4125239_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182029
NZ_CP041082.1\|WP_055316540.1\|4135293_4135599_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379402
NZ_CP041082.1\|WP_060568332.1\|4133571_4133856_+\|host-nuclease-inhibitor-GamL	unknown	unknown	unknown
NZ_CP041082.1\|WP_064147793.1\|4127793_4128039_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041082.1\|WP_064147796.1\|4134776_4135259_+\|siphovirus-Gp157-family-protein	unknown	unknown	gnl\|CDD\|368503
NZ_CP041082.1\|WP_060578943.1\|4133865_4134780_+\|DNA-recombinase	unknown	unknown	gnl\|CDD\|236628
NZ_CP041082.1\|WP_023339691.1\|4127144_4127333_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041082.1\|WP_064147791.1\|4125945_4126227_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041082.1\|WP_020804196.1\|4132624_4132744_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041082.1\|WP_012542626.1\|4128484_4128778_-\|protein-ren	unknown	unknown	gnl\|CDD\|238042
NZ_CP041082.1\|WP_117008209.1\|4128777_4130208_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274672
NZ_CP041082.1\|WP_032431543.1\|4131879_4132602_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP041082.1\|WP_032431544.1\|4131583_4131811_-\|Cro/Cl-family-transcriptional-regulator	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP041082.1\|WP_064147790.1\|4125238_4125694_-\|hypothetical-protein	gnl\|CDD\|182057	PRK09741, PRK09741, hypothetical protein; Provisional.	2.65704e-77
NZ_CP041082.1\|WP_055316537.1\|4135595_4136252_+\|DNA-methyltransferase	gnl\|CDD\|227069	COG4725, IME4, Transcriptional activator, adenine-specific DNA methyltransferase [Signal transduction mechanisms / Transcription].	3.21717e-22
NZ_CP041082.1\|WP_060578951.1\|4124437_4125076_-\|hypothetical-protein	gnl\|CDD\|368603	pfam05766, NinG, Bacteriophage Lambda NinG protein. NinG or Rap is involved in recombination. Rap (recombination adept with plasmid) increases lambda-by-plasmid recombination catalyzed by Escherichia coli's RecBCD pathway.	4.95073e-56
NZ_CP041082.1\|WP_004139615.1\|4131321_4131543_-\|bacteriophage-CII-family-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	2.45228e-09
NZ_CP041082.1\|WP_023342724.1\|4125068_4125239_-\|hypothetical-protein	gnl\|CDD\|182029	PRK09689, PRK09689, prophage protein NinE; Provisional.	2.38423e-20
NZ_CP041082.1\|WP_008807814.1\|4133283_4133490_+\|phage-encoded-cell-division-inhibitor-protein	gnl\|CDD\|236900	PRK11354, kil, FtsZ inhibitor protein; Reviewed.	1.49968e-15
NZ_CP041082.1\|WP_055316540.1\|4135293_4135599_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379402	pfam13936, HTH_38, Helix-turn-helix domain. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	0.00030674
NZ_CP041082.1\|WP_012542626.1\|4128484_4128778_-\|protein-ren	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	0.000892927
NZ_CP041082.1\|WP_064147796.1\|4134776_4135259_+\|siphovirus-Gp157-family-protein	gnl\|CDD\|368503	pfam05565, Sipho_Gp157, Siphovirus Gp157. This family contains both viral and bacterial proteins which are related to the Gp157 protein of the Streptococcus thermophilus SFi bacteriophages. It is thought that bacteria possessing the gene coding for this protein have an increased resistance to the bacteriophage.	4.28327e-37
NZ_CP041082.1\|WP_060578943.1\|4133865_4134780_+\|DNA-recombinase	gnl\|CDD\|236628	PRK09846, recT, recombination protein RecT.	3.72374e-25
NZ_CP041082.1\|WP_077267114.1\|4126219_4126678_-\|DUF551-domain-containing-protein	gnl\|CDD\|367946	pfam04448, DUF551, Protein of unknown function (DUF551). This family represents the carboxy terminus of a protein of unknown function, found in dsDNA viruses with no RNA stage, including bacteriophages lambda and P22, and also in some Escherichia coli prophages.	1.00935e-10
NZ_CP041082.1\|WP_117008209.1\|4128777_4130208_-\|AAA-family-ATPase	gnl\|CDD\|274672	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. [Mobile and extrachromosomal element functions, Prophage functions].	1.59819e-158
NZ_CP041082.1\|WP_032431543.1\|4131879_4132602_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	2.25089e-20

>NZ_CP041082.1|WP_117008209.1|4128777_4130208_-|AAA-family-ATPase
MTSDFMTPPHSIEAEQSVLGGLLLDDDSSERTQKVLSILKPESFYSRQHQVIFAEMRQMYRDHKPVDLLTLFDALESKGLTETVGGFAYLAEMSKNTPSAANIVAYAMRVRETAMERYGIEKTTKAIELLYARNGMTAEQKFDAIQGLFTEITEHVKTGRRTGLRTFYDAVTDWSAEFDERLKPDGRSRGLSTGIRSLDELLGVKRIVRGSLFVIGARPKMGKTTLYTQMGINCATVENEPALMFSLEMPEGQMVEKITAQKGRISPNLFYPDMTKDDYGYRGDWNGDLKKATGVMGALIDTNNLLIDDTPGISLAHVMAESRRIKRERGKVGMILVDYLTLMTADKAERNDLAYGLITKGLKTLAKELDCVVVLLTQLNRDLEKRTNKRPLPSDSRDTGQIEQDCDYWLAIYREGAYDENANQSDTELLLRLNRHGETGVVYCEQRHGAIYDCDQEAASQRRREKEEKPTKRGGF
>NZ_CP041082.1|WP_012542626.1|4128484_4128778_-|protein-ren
MTGKDAILNYLKTHKTCSSPDVAAASGMTHTCINQAANILAKQGVLVAEARVWRTVYYRLATEEEISGRKSTNQIFNECRQSPAMKRVLAVYGRTSA
>NZ_CP041082.1|WP_077267115.1|4128035_4128482_-|hypothetical-protein
MTLEAVNELIASLESAGELSIREQKFLKLAKAFKQLAAENVALKSKGKELLGEACAVYSRLNKMIDPSIGDFVDGQTLHEFQFVLDAETPATDRIVAGIKADGVEEFIGRLQQCVDGGDFVGDEVAVIVGAIDCGKEFCEKLREGVDK
>NZ_CP041082.1|WP_064147793.1|4127793_4128039_-|hypothetical-protein
MSRHDFRRPIAEHISNIRSELAKVPAEKRLHVIAEALYDMNPSGSDEVLRASCGCYEWDISMDYRSADIRYADKNKQEDAA
>NZ_CP041082.1|WP_023339691.1|4127144_4127333_-|hypothetical-protein
MKMGEHMEPVVELLEELNGNNTDAKLKLLALVISEYMLNADVTGFEVTAGKMKVSVDISVEE
>NZ_CP041082.1|WP_077267114.1|4126219_4126678_-|DUF551-domain-containing-protein
MFNHPEQHLDMVDHSGDVNEKGGDGNSPVIPDGWTCNDKANAALMMLDRIETVDPVDDDRIDGIKRIVRELAAAPHDTPALNSIQSVDTVADRWIPVSERMPESNGVYFGWDGKRVLEVNCFFGGFSANQFIHGEITHWMPLPAAPQEVNHG
>NZ_CP041082.1|WP_064147791.1|4125945_4126227_-|hypothetical-protein
MAELRAGGLAIIIRSRFPENVGKVVKLVTCVGKINYDLNPGIYWEVEALSELSGTLWRAKPGLNGLALAKNLMPIDGDDFSNEDQHQKEREHA
>NZ_CP041082.1|WP_064147790.1|4125238_4125694_-|hypothetical-protein
MNIPQCGIRLHSGNFSAIGKILQEQLSDGKCLRLQVKEWREKRSLSQNALSHMWYAEISEYLINSGRTDATPEWVKRNLKKTYLGCEEVTYTDFITGEKTTTWEPRHTSDLDTSEMHIFLTKVEAWCAQFGLALTIPHGCEYQQLQQKQEA
>NZ_CP041082.1|WP_023342724.1|4125068_4125239_-|hypothetical-protein
MSSLLAKVMERGIFRVPARRKRKVEVKPSDIPTLKDYTARLVDKKWLRLRARRPHA
>NZ_CP041082.1|WP_060578951.1|4124437_4125076_-|hypothetical-protein
MRKPARRKCAHCREWFHPAREGQVVCSFECASAIGKKQTAKAREVAKARAMKRQRESEKEGRQRRRAKRESFKTKAQWDKEAQSAFNRYIRIRDEGKPCVSCGSPLIGKSNYLTGSAIDASHYRSRGAASHLKFNVFNVHSACTRCNRQLSGNAVEYRIHLIERIGLDRVERLEADNVPRRFDIPYLQRIKSIFTRRARALEKRRARHQEAA
>NZ_CP041082.1|WP_004139615.1|4131321_4131543_-|bacteriophage-CII-family-protein
MESSTTRNKVEARRIESWLHSQIAELGTTTIAKVAGVNKSTVSRWRESLLPNMSLLLAILISNRPGEKGDFEA
>NZ_CP041082.1|WP_032431544.1|4131583_4131811_-|Cro/Cl-family-transcriptional-regulator
MAPNSLGEIIKKIRVPVVAKACGCSPRAIYKWIANGSLPRTDYTDETNYAEKIALASGGQFTAAQIREVSKPKAA
>NZ_CP041082.1|WP_032431543.1|4131879_4132602_+|helix-turn-helix-transcriptional-regulator
MIEHMVHEERARKEFSLRLALACDKAGLMPHGRQAEIAKRMKLTPKAVSKWFNGESIPRRGTLQALASHIGTSASYLLGDADDDGIEPGSATNRKDIFRIDLLDIAVSAGPGVINQEFVEILRSVEYAPAEANHMFDGRKAENIRIINVRGDSMSGTIEPGDLLFVDVSVRKFDGDGIYAFLYDDTAHVKRLQKMKDKLLVISDNKSYAPWEPIEKDEMNRVFVFGKVIGSMPQTYRKHG
>NZ_CP041082.1|WP_020804196.1|4132624_4132744_+|hypothetical-protein
MSDLIIPILITLLIIGLVGIVLRLDKIFFKRRDERDDFE
>NZ_CP041082.1|WP_008807814.1|4133283_4133490_+|phage-encoded-cell-division-inhibitor-protein
MVSHHYGTQTVNRGAVLPGMLVKHRESTWTASANKRGRLYLHRGIERTYTTDLLVEVYLNGLGQGLSR
>NZ_CP041082.1|WP_060568332.1|4133571_4133856_+|host-nuclease-inhibitor-GamL
MNAYRAYDAIEERKWAEQLLTEEKEKWIEDRAQEIIDALPKEPSGLFRFSVPMDKSPYEGLRSDAAGEAYNDLISAVAYAQAEYDWDHRTGCPF
>NZ_CP041082.1|WP_060578943.1|4133865_4134780_+|DNA-recombinase
MSFDLIQFVKQQESLFNGALTDQSLTWAKECQFAIQLFQRNDKLAQTAISNPVSAQNAIINVAAVGISLNPASKLAYLVPRDGMVCLDISYMGLLHIAQSAGVIKWGQCKLVHACDAYETVGLDKAPAHKYNPFATPEERGAVIGGYCTVKTSDGDYLTEEMSLAEIEEIRKVSKAGTSPKGPWVNFWSEMARKTIVKRAYKYWPRADRLDNAVDMLNESEGIFTEPVMQYTPESEVIQSKENAEQELINSVHSLCEDMRQAANMHALKTHFQAAYKMTAGMRLQQEVQAVYAKCKAKFEEVTQ
>NZ_CP041082.1|WP_064147796.1|4134776_4135259_+|siphovirus-Gp157-family-protein
MTALYQIANDFAKLTDSGMEPEMIADTLDGIEWELEAKVEQILAICKNESAYAEALKEESKCLAERAKAAESKVASMKDYVAKSLETAGKKSLKAGIHQVTVRAPSKSVEITDASILPPQFVEYETNIEPDKLAIKHQIEAGVEVPGAQIKLGKPSLIIK
>NZ_CP041082.1|WP_055316540.1|4135293_4135599_+|helix-turn-helix-domain-containing-protein
MNKQSITPEQFRAVAGTMPACRAADALGISQANFYRLAQSYSISTAFVYKRWKPEEKQIAAELRAAGESHKSIAMKMGRSVASVSRTLSRMRKADTKRGAQ
>NZ_CP041082.1|WP_055316537.1|4135595_4136252_+|DNA-methyltransferase
MNRYSLIYADPAWSYGNTVSNGAAVDHYPTMSLLDMKRLPVWELAADNAVLAMWYTGTHNQEAIELAQAWGFTVRTMKGFTWVKLNQLAELRITKALAEGEVADFYDFLDLLNAETRMNGGNHTRANTEDVLIATRGAGLERKHAGIKQVVYSPLGAHSEKPWEVRHRLELLYGDVPRIELFSRSAAPGWSHWGNQCATASVELIPGCAIDVVKTEAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP041082_2	2.1\|1762092\|40\|NZ_CP041082\|PILER-CR	1762092-1762131	40	NZ_CP041082.1	1762395-1762434	1	0.975
NZ_CP041082_2	2.2\|1762193\|40\|NZ_CP041082\|PILER-CR	1762193-1762232	40	NZ_CP041082.1	1762395-1762434	1	0.975

1. spacer 2.1|1762092|40|NZ_CP041082|PILER-CR matches to position: 1762395-1762434, mismatch: 1, identity: 0.975

taccccgattagttcgccatcccgtaggcctgataagcga	CRISPR spacer
taccccgattagttcgccattccgtaggcctgataagcga	Protospacer
********************.*******************

2. spacer 2.2|1762193|40|NZ_CP041082|PILER-CR matches to position: 1762395-1762434, mismatch: 1, identity: 0.975

taccccgattagttcgccatcccgtaggcctgataagcga	CRISPR spacer
taccccgattagttcgccattccgtaggcctgataagcga	Protospacer
********************.*******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Identity
NZ_CP041082_4	4.1\|4130638\|36\|NZ_CP041082\|CRISPRCasFinder	4130638-4130673	36	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	8447-8482	1.0
NZ_CP041082_4	4.1\|4130638\|36\|NZ_CP041082\|CRISPRCasFinder	4130638-4130673	36	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	8447-8482	1.0
NZ_CP041082_4	4.1\|4130638\|36\|NZ_CP041082\|CRISPRCasFinder	4130638-4130673	36	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	11383-11418	1.0

1. spacer 4.1|4130638|36|NZ_CP041082|CRISPRCasFinder matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 0, identity: 1.0

cctcgccggtacgcagcgtggttactgggtttgcgt	CRISPR spacer
cctcgccggtacgcagcgtggttactgggtttgcgt	Protospacer
************************************

2. spacer 4.1|4130638|36|NZ_CP041082|CRISPRCasFinder matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 0, identity: 1.0

cctcgccggtacgcagcgtggttactgggtttgcgt	CRISPR spacer
cctcgccggtacgcagcgtggttactgggtttgcgt	Protospacer
************************************

3. spacer 4.1|4130638|36|NZ_CP041082|CRISPRCasFinder matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 0, identity: 1.0

cctcgccggtacgcagcgtggttactgggtttgcgt	CRISPR spacer
cctcgccggtacgcagcgtggttactgggtttgcgt	Protospacer
************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

132587 : 145070

Morganella_phage(33.33%)

integrase

attL 132567:132580|attR 149847:149860

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
132567:132580	attL	NA	NA	NA	NA
WP_100117515.1\|132587_132911_-	superinfection immunity protein	A0A0S2SY85	Pseudomonas_phage	8.0e-18	45.0
WP_074513081.1\|132980_133139_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_029497057.1\|133575_134532_+	hypothetical protein	A5LH79	Enterobacteria_phage	4.6e-61	43.0
WP_029497056.1\|134544_134982_+	hypothetical protein	A5LH78	Enterobacteria_phage	7.3e-14	35.1
WP_100774730.1\|135682_138445_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	1.0e-294	57.7
WP_100774729.1\|138459_139086_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	5.0e-24	34.2
WP_029497051.1\|139082_139295_-	hypothetical protein	NA	NA	NA	NA
WP_029497050.1\|139291_139552_-	hypothetical protein	NA	NA	NA	NA
WP_117008212.1\|139548_140508_-	ash family protein	A0A291AWU3	Escherichia_phage	1.6e-05	41.2
WP_004866303.1\|140504_140684_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_074513084.1\|140683_141256_-	antirepressor protein	A0A1W6JPH8	Morganella_phage	2.6e-51	58.0
WP_074513085.1\|141287_142097_-	antA/AntB antirepressor family protein	A0A0R6PJV6	Moraxella_phage	1.5e-28	44.1
WP_074513086.1\|142110_142458_-	hypothetical protein	NA	NA	NA	NA
WP_070544355.1\|142457_142676_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_124034788.1\|142823_143696_-	hypothetical protein	NA	NA	NA	NA
WP_074513109.1\|143810_145070_-\|integrase	site-specific integrase	A0A1W6JPG6	Morganella_phage	1.3e-199	80.3
149847:149860	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1325401 : 1391484

Salmonella_phage(41.67%)

protease,tail,capsid,terminase,holin,transposase,integrase

attL 1326396:1326413|attR 1394232:1394249

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032418525.1\|1325401_1326868_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.5e-87	38.7
1326396:1326413	attL	NA	NA	NA	NA
WP_004151979.1\|1326935_1328513_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_032418526.1\|1328704_1329958_+\|integrase	site-specific integrase	A0A1X9TCT6	Enterobacter_phage	3.5e-202	83.6
WP_032418527.1\|1330219_1330882_-	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	4.7e-97	75.5
WP_032418529.1\|1330878_1331481_-	adenine methylase	A0A193GYV6	Enterobacter_phage	4.0e-103	92.4
WP_023285452.1\|1331477_1331984_-	hypothetical protein	NA	NA	NA	NA
WP_009485474.1\|1331980_1332139_-	DUF1317 family protein	T1SAR0	Salmonella_phage	8.7e-18	80.8
WP_009485475.1\|1332131_1332425_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	4.0e-32	71.1
WP_004144294.1\|1332534_1332783_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	2.8e-31	78.0
WP_032418530.1\|1332833_1333856_-	recombination protein RecT	Q858E1	Salmonella_phage	4.0e-180	95.3
WP_004144292.1\|1333865_1334765_-	endonuclease	Q858E0	Salmonella_phage	6.5e-158	91.0
WP_004164029.1\|1334761_1335061_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
WP_004144290.1\|1335427_1336009_-	helix-turn-helix transcriptional regulator	Q858D7	Salmonella_phage	7.1e-65	64.3
WP_004152538.1\|1336163_1336397_+	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
WP_004152537.1\|1336543_1336753_+	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
WP_004207253.1\|1336752_1337520_+	hypothetical protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
WP_032418532.1\|1337516_1338302_+	replication protein	A0A193GYX1	Enterobacter_phage	3.7e-133	87.7
WP_032418534.1\|1338421_1338769_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	1.9e-49	81.7
WP_032419436.1\|1338961_1339363_+	hypothetical protein	A0A2H4N7F5	Pectobacterium_phage	8.7e-22	51.6
WP_025860565.1\|1339434_1339644_+	hypothetical protein	NA	NA	NA	NA
WP_032418536.1\|1339640_1339895_+	hypothetical protein	NA	NA	NA	NA
WP_032419437.1\|1339894_1340158_+	hypothetical protein	A0A2P0P958	Salmonella_phage	3.5e-27	65.5
WP_032418538.1\|1340851_1341091_+	hypothetical protein	G8C7S3	Escherichia_phage	8.6e-09	51.7
WP_032418539.1\|1341090_1341429_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	3.1e-44	79.1
WP_032418540.1\|1341503_1341761_+	hypothetical protein	NA	NA	NA	NA
WP_032418541.1\|1341838_1342423_+\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	9.9e-91	88.6
WP_032418542.1\|1342419_1343895_+	hypothetical protein	Q858H3	Salmonella_phage	2.4e-279	92.4
WP_032413826.1\|1343937_1344309_-	phage family protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	6.8e-61	93.5
WP_071890493.1\|1344359_1344560_+	hypothetical protein	NA	NA	NA	NA
WP_004225268.1\|1344896_1345085_+	hypothetical protein	NA	NA	NA	NA
WP_004152472.1\|1345106_1345310_+	hypothetical protein	NA	NA	NA	NA
WP_004149313.1\|1345313_1346993_+\|tail	tail protein	T1S9Z7	Salmonella_phage	3.6e-194	59.3
WP_004152470.1\|1346989_1347295_+	hypothetical protein	Q2A090	Sodalis_phage	1.1e-16	51.3
WP_004152468.1\|1347576_1347975_+	peptidase	T1SAP9	Salmonella_phage	5.6e-37	59.5
WP_117008232.1\|1347987_1348995_+\|capsid	phage capsid protein	T1S9H9	Salmonella_phage	6.1e-181	92.5
WP_004152466.1\|1349004_1349397_+	hypothetical protein	T1SA71	Salmonella_phage	1.5e-55	89.9
WP_024622837.1\|1349389_1349668_+	hypothetical protein	T1SA01	Salmonella_phage	1.1e-20	58.9
WP_004197381.1\|1349716_1350328_+	hypothetical protein	T1SAQ2	Salmonella_phage	9.2e-47	48.8
WP_032418543.1\|1350327_1352805_+	hypothetical protein	G9L6D0	Escherichia_phage	2.3e-266	56.4
WP_032418545.1\|1352806_1353277_+	hypothetical protein	Q858G2	Salmonella_phage	9.5e-44	55.3
WP_025860587.1\|1353269_1353767_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	8.9e-24	41.7
WP_032418548.1\|1353779_1356524_+	bacteriophage protein	A0A193GYI3	Enterobacter_phage	3.9e-97	39.7
WP_032418549.1\|1356523_1359913_+	hypothetical protein	G9L6D4	Escherichia_phage	2.4e-120	42.0
WP_025368005.1\|1359922_1360537_+	hypothetical protein	NA	NA	NA	NA
WP_071844733.1\|1360572_1360725_-	transmembrane anchored protein	G9L6D9	Escherichia_phage	5.6e-14	83.7
WP_032418553.1\|1361154_1361343_-	hypothetical protein	NA	NA	NA	NA
WP_032418554.1\|1361494_1362184_-	anti-repressor protein	A0A193GYJ9	Enterobacter_phage	9.9e-74	58.5
WP_057193984.1\|1362655_1363507_+	hypothetical protein	NA	NA	NA	NA
WP_032409245.1\|1363720_1364017_-	hypothetical protein	T1SA06	Salmonella_phage	1.2e-23	62.7
WP_032418557.1\|1366685_1366961_+	hypothetical protein	NA	NA	NA	NA
WP_032418558.1\|1367073_1367478_+	membrane protein	T1SA79	Salmonella_phage	2.1e-55	82.6
WP_032418559.1\|1367464_1367770_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	4.6e-39	81.4
WP_032418560.1\|1367759_1368389_+	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	1.5e-92	78.4
WP_032418561.1\|1368385_1368886_+	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	1.1e-69	90.0
WP_009309501.1\|1369072_1370941_-	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6
WP_032440239.1\|1370924_1372103_-	anaerobic sulfatase maturase	NA	NA	NA	NA
WP_032418564.1\|1372396_1373629_-	MFS transporter	NA	NA	NA	NA
WP_002913846.1\|1373726_1374614_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002913843.1\|1374710_1374902_-	DUF2633 family protein	G9L6F2	Escherichia_phage	3.3e-19	79.3
WP_021469752.1\|1375254_1377483_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
WP_004149289.1\|1377536_1379069_-	exopolyphosphatase	NA	NA	NA	NA
WP_002913838.1\|1379072_1381133_-	polyphosphate kinase 1	NA	NA	NA	NA
WP_004145656.1\|1381313_1381955_-	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	9.0e-29	41.1
WP_002913836.1\|1381951_1382989_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.2e-72	44.5
WP_004213188.1\|1383252_1384146_+	ROK family protein	NA	NA	NA	NA
WP_004174870.1\|1384155_1385589_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_002913827.1\|1385806_1386433_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_002913824.1\|1386528_1387815_+	uracil permease	Q9KX94	Enterobacteria_phage	1.9e-65	38.1
WP_020947395.1\|1387913_1388615_+	DnaA inactivator Hda	NA	NA	NA	NA
WP_002913812.1\|1388611_1389523_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.5e-74	58.8
WP_002913810.1\|1389651_1390011_-	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
WP_002913807.1\|1390020_1391484_-\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
1394232:1394249	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1782793 : 1791172

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032418677.1\|1782793_1784200_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	1.8e-37	28.7
WP_032418679.1\|1784422_1785487_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.4e-105	55.0
WP_004175258.1\|1785513_1786383_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.7e-111	67.0
WP_004175259.1\|1786414_1787305_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	34.2
WP_021313307.1\|1787319_1787874_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
WP_004175261.1\|1788053_1789220_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.7
WP_032409012.1\|1789645_1789768_-	small membrane protein	NA	NA	NA	NA
WP_004175262.1\|1790167_1791172_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.8e-31	29.5

DBSCAN-SWA_4

1915588 : 2049656

152

Enterobacteria_phage(23.4%)

head,protease,portal,tail,capsid,plate,terminase,holin,integrase,tRNA

attL 1968351:1968369|attR 2006099:2006117

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000059623.1\|1915588_1916851_-\|integrase	tyrosine-type recombinase/integrase	A0A1B0VMI6	Pseudomonas_phage	4.8e-74	39.3
WP_002911729.1\|1917418_1918336_+	nitrogen assimilation transcriptional regulator	NA	NA	NA	NA
WP_032418726.1\|1918442_1919393_+	HTH-type transcriptional regulator Cbl	NA	NA	NA	NA
WP_064147810.1\|1919471_1920413_+	L,D-transpeptidase	NA	NA	NA	NA
WP_004141160.1\|1920791_1921712_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002911718.1\|1921852_1922242_+	RidA family protein	NA	NA	NA	NA
WP_002911599.1\|1922907_1923705_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_004184758.1\|1924000_1924993_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	4.9e-175	87.2
WP_032418728.1\|1924994_1925222_-	DUF4224 domain-containing protein	Q8HAA9	Salmonella_phage	3.8e-30	78.4
WP_077261142.1\|1925254_1925533_-	hypothetical protein	K7PKM4	Enterobacterial_phage	6.7e-13	44.9
WP_050598702.1\|1925529_1926438_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	9.8e-45	61.6
WP_055314381.1\|1926430_1927507_-	DGQHR domain-containing protein	T1SBJ4	Salmonella_phage	2.1e-147	74.1
WP_032418730.1\|1927634_1928420_-	hypothetical protein	A4JX52	Burkholderia_virus	1.4e-60	50.2
WP_032418731.1\|1928419_1928719_-	hypothetical protein	K7PJS4	Enterobacterial_phage	3.8e-14	46.7
WP_032418732.1\|1928806_1929724_-	recombination-associated protein RdgC	A0A1W6JP69	Morganella_phage	3.1e-46	36.9
WP_032408726.1\|1930170_1930818_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	9.3e-74	63.0
WP_016530206.1\|1930922_1931120_+	hypothetical protein	H9C161	Pectobacterium_phage	2.7e-16	66.1
WP_004213338.1\|1931145_1931607_+	hypothetical protein	K7PJS5	Enterobacterial_phage	1.7e-69	88.2
WP_001208720.1\|1931844_1932024_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	4.6e-15	73.1
WP_032418734.1\|1932013_1932982_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.0e-84	66.4
WP_032418735.1\|1933187_1934012_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	2.6e-113	69.5
WP_032418736.1\|1934021_1934399_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	3.3e-47	72.8
WP_032418737.1\|1934411_1935392_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	8.4e-135	67.2
WP_032418738.1\|1935405_1935984_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.7e-50	56.7
WP_032418739.1\|1936135_1936375_+	hypothetical protein	NA	NA	NA	NA
WP_140561791.1\|1936545_1936842_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	7.6e-39	84.7
WP_032418741.1\|1936841_1937381_+	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	2.0e-101	98.9
WP_032418742.1\|1937377_1937725_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.1e-40	81.7
WP_032418743.1\|1937721_1937997_+	hypothetical protein	A0A286N2Q8	Klebsiella_phage	3.9e-05	70.3
WP_032418744.1\|1937947_1938142_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	4.6e-21	87.3
WP_022065473.1\|1938499_1938745_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.6e-34	98.8
WP_032419453.1\|1939256_1939607_+	HNH endonuclease	A0A1B5FP94	Escherichia_phage	4.6e-51	80.7
WP_004884285.1\|1939738_1940233_+\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	1.2e-81	92.0
WP_032418747.1\|1940229_1941960_+\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	9.2e-302	83.4
WP_021313630.1\|1941969_1942155_+	hypothetical protein	A0A1B5FP99	Escherichia_phage	5.2e-14	63.9
WP_004899640.1\|1942154_1943384_+\|portal	phage portal protein	U5P411	Shigella_phage	1.7e-201	81.5
WP_004884313.1\|1943370_1944024_+\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	2.1e-105	87.4
WP_021313628.1\|1944038_1945247_+\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	9.9e-194	84.5
WP_077254151.1\|1945273_1945489_+	hypothetical protein	M1FN89	Enterobacteria_phage	1.9e-07	42.4
WP_021313626.1\|1945485_1945806_+\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	4.8e-15	43.1
WP_032408655.1\|1945814_1946153_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	1.4e-41	74.1
WP_019705270.1\|1946149_1946599_+	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	6.7e-63	82.6
WP_016530186.1\|1946595_1946943_+	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	2.8e-32	63.7
WP_021313623.1\|1946999_1947704_+	immunoglobulin domain-containing protein	K7PHL2	Enterobacterial_phage	2.5e-80	66.9
WP_029497345.1\|1947734_1948139_+\|tail	phage tail protein	K7PKV6	Enterobacterial_phage	3.2e-32	56.9
WP_032418748.1\|1948141_1948447_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	1.4e-27	63.6
WP_016530182.1\|1948520_1948754_+	hypothetical protein	K7PH16	Enterobacteria_phage	1.9e-08	47.2
WP_032418749.1\|1948814_1952201_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	2.5e-303	57.9
WP_023301979.1\|1952221_1952695_+	hypothetical protein	A0A286S298	Klebsiella_phage	4.6e-54	60.8
WP_021313618.1\|1952681_1953167_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	3.0e-53	66.2
WP_021313617.1\|1953176_1953557_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	2.1e-57	80.2
WP_032418750.1\|1953553_1956637_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	71.9
WP_032419560.1\|1959134_1959425_-	hypothetical protein	NA	NA	NA	NA
WP_116993091.1\|1959479_1961189_-	hypothetical protein	H6X4Y8	Enterobacteria_phage	1.2e-16	37.0
WP_032418751.1\|1961321_1961900_+	recombinase family protein	A0A286S1P7	Klebsiella_phage	2.2e-90	93.4
WP_004892499.1\|1961950_1962373_+	hypothetical protein	K7P834	Enterobacteria_phage	1.8e-25	44.5
WP_004216505.1\|1962784_1963024_+	hypothetical protein	I6PD82	Cronobacter_phage	7.5e-21	54.4
WP_032418752.1\|1963026_1963353_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.6e-26	53.9
WP_002911596.1\|1963956_1965102_-	porin OmpC	Q1MVN1	Enterobacteria_phage	1.1e-117	58.7
WP_004148893.1\|1965493_1965760_-	hypothetical protein	NA	NA	NA	NA
WP_004151461.1\|1965640_1965922_+	hypothetical protein	NA	NA	NA	NA
WP_002911594.1\|1965964_1966672_+	phosphohydrolase	S4W232	Pandoravirus	2.8e-07	27.7
WP_032418753.1\|1966715_1968149_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	2.0e-100	52.7
WP_032419454.1\|1968129_1968624_+	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	9.7e-31	50.7
1968351:1968369	attL	NA	NA	NA	NA
WP_004184683.1\|1968598_1969510_-	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_002911591.1\|1969693_1970605_+	DUF808 domain-containing protein	NA	NA	NA	NA
WP_032418754.1\|1970719_1972399_+	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	3.1e-20	41.1
WP_004151458.1\|1972698_1972923_-	YodD family protein	NA	NA	NA	NA
WP_004141144.1\|1973047_1973245_+	protein DsrB	NA	NA	NA	NA
WP_002911561.1\|1973277_1973901_-	transcriptional regulator RcsA	NA	NA	NA	NA
WP_004175397.1\|1974276_1974708_+	lipoprotein	NA	NA	NA	NA
WP_004189225.1\|1974749_1976237_-	alpha-amylase	NA	NA	NA	NA
WP_004141135.1\|1976437_1977238_+	cystine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004180445.1\|1977333_1978320_+	D-cysteine desulfhydrase	NA	NA	NA	NA
WP_002911547.1\|1978335_1979004_+	cystine ABC transporter permease	NA	NA	NA	NA
WP_004151455.1\|1979000_1979753_+	L-cystine ABC transporter ATP-binding protein YecC	G3M9Y6	Bacillus_virus	2.2e-26	34.4
WP_002911542.1\|1980070_1980793_+	transcriptional regulator SdiA	NA	NA	NA	NA
WP_002911541.1\|1980860_1981085_-	DUF2594 family protein	NA	NA	NA	NA
WP_002911539.1\|1981546_1982203_+	UvrY/SirA/GacA family response regulator transcription factor	NA	NA	NA	NA
WP_002911538.1\|1982199_1984032_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_002911537.1\|1984089_1984638_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_032418755.1\|1985211_1986219_-\|integrase	tyrosine-type recombinase/integrase	Q1I119	Pasteurella_virus	1.3e-103	56.5
WP_050598706.1\|1986215_1987082_-	hypothetical protein	NA	NA	NA	NA
WP_032418756.1\|1987098_1987728_-	membrane protein	NA	NA	NA	NA
WP_077261143.1\|1987737_1988166_-	helix-turn-helix transcriptional regulator	A0A2H4JFL3	uncultured_Caudovirales_phage	1.0e-07	38.5
WP_032418759.1\|1988438_1988642_+	hypothetical protein	P79674	Haemophilus_phage	6.4e-05	37.1
WP_050598721.1\|1988864_1989062_+	hypothetical protein	NA	NA	NA	NA
WP_032418760.1\|1989078_1989477_+	hypothetical protein	NA	NA	NA	NA
WP_032418761.1\|1989486_1989759_+	hypothetical protein	NA	NA	NA	NA
WP_032418762.1\|1989827_1990052_+	hypothetical protein	NA	NA	NA	NA
WP_032418763.1\|1990048_1990627_+	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	3.2e-33	41.1
WP_032418764.1\|1990635_1990863_+	hypothetical protein	A0A286S1P6	Klebsiella_phage	5.5e-05	49.0
WP_032418765.1\|1990859_1991054_+	hypothetical protein	NA	NA	NA	NA
WP_032418766.1\|1991046_1992000_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4QWR0	Salmonella_phage	3.6e-82	56.3
WP_032418767.1\|1992314_1993331_+	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	1.9e-97	55.1
WP_032418768.1\|1993323_1995918_+	replication protein	A0A0M4RTM8	Salmonella_phage	1.2e-196	52.4
WP_032418769.1\|1996114_1997116_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_032418771.1\|1997851_1998898_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	5.8e-142	69.1
WP_032418772.1\|1998897_2000619_-	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	6.2e-226	66.2
WP_032418773.1\|2000779_2001613_+\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	1.1e-95	65.6
WP_032418774.1\|2001637_2002687_+\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	5.7e-105	55.0
WP_032418775.1\|2002734_2003634_+\|terminase	terminase	B9A7B6	Serratia_phage	3.5e-87	77.0
WP_032418776.1\|2003736_2004234_+\|head	head completion/stabilization protein	B9A7B7	Serratia_phage	1.2e-60	71.5
WP_032418777.1\|2004233_2004434_+\|tail	tail protein	A0A0A7NV57	Enterobacteria_phage	6.7e-15	64.6
WP_032418778.1\|2004424_2004706_+	hypothetical protein	B9A7B8	Serratia_phage	1.1e-18	57.1
WP_032418779.1\|2004702_2005254_+	lysozyme	Q1I0Z1	Pasteurella_virus	9.2e-30	41.3
WP_050598707.1\|2005250_2005646_+	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_032418780.1\|2005790_2006249_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	6.2e-32	48.1
2006099:2006117	attR	NA	NA	NA	NA
WP_032418781.1\|2006245_2006887_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	1.5e-44	48.3
WP_032418782.1\|2006886_2007465_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	5.1e-63	62.6
WP_032418783.1\|2007461_2007830_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	2.3e-29	58.3
WP_032418784.1\|2007816_2008716_+\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	6.2e-92	60.9
WP_032418785.1\|2008708_2009305_+\|tail	phage tail protein I	A0A0M4R4W9	Salmonella_phage	1.5e-41	46.3
WP_140561738.1\|2009309_2010233_+	hypothetical protein	G8GDR5	Salmonella_phage	2.3e-09	46.3
WP_140561741.1\|2010229_2011468_+	hypothetical protein	H6X4Y8	Enterobacteria_phage	9.0e-17	37.0
WP_032418787.1\|2012687_2013845_+\|tail	phage tail protein	S4TP62	Salmonella_phage	2.5e-45	49.8
WP_032418788.1\|2013972_2014461_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	1.6e-49	65.0
WP_032418789.1\|2014472_2017412_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	2.6e-208	44.2
WP_101972624.1\|2017392_2017569_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.5e-10	69.8
WP_032418790.1\|2017565_2017865_-	hypothetical protein	B9A7B2	Serratia_phage	3.1e-32	73.7
WP_032418791.1\|2017919_2018435_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.6e-63	70.0
WP_032418792.1\|2018434_2019616_-\|tail	tail protein	A0A0A7NV69	Enterobacteria_phage	1.2e-156	69.3
WP_032418793.1\|2019769_2020924_+	phage late control D family protein	B9A7A9	Serratia_phage	4.2e-178	80.7
WP_044785060.1\|2020968_2021217_+	hypothetical protein	NA	NA	NA	NA
WP_004180444.1\|2021603_2022485_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_023316206.1\|2022583_2023252_+	YecA family protein	NA	NA	NA	NA
WP_004151453.1\|2023276_2024488_-	tyrosine transporter TyrP	NA	NA	NA	NA
WP_004175410.1\|2024679_2024919_+	YecH family protein	NA	NA	NA	NA
WP_004141101.1\|2024954_2025452_-	non-heme ferritin	NA	NA	NA	NA
WP_020956668.1\|2025509_2025689_-	hypothetical protein	NA	NA	NA	NA
WP_002911524.1\|2027552_2027804_+	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_004175412.1\|2027841_2029404_-	MFS transporter	NA	NA	NA	NA
WP_004148869.1\|2029418_2029577_+	succinate dehydrogenase	NA	NA	NA	NA
WP_004175413.1\|2029647_2030157_-	non-heme ferritin-like protein	NA	NA	NA	NA
WP_071890473.1\|2030250_2030454_+	hypothetical protein	NA	NA	NA	NA
WP_002911518.1\|2031051_2032032_+	arabinose ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_032418795.1\|2032094_2033609_+	L-arabinose ABC transporter ATP-binding protein AraG	A0A2R8FG22	Brazilian_cedratvirus	4.1e-11	30.0
WP_002911507.1\|2033623_2034604_+	L-arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_002911505.1\|2034765_2035554_+	trehalose-phosphatase	NA	NA	NA	NA
WP_004175414.1\|2035528_2036953_+	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
WP_002911500.1\|2036976_2037405_-	universal stress protein UspC	NA	NA	NA	NA
WP_002911499.1\|2037758_2039342_+	MFS transporter	NA	NA	NA	NA
WP_004184668.1\|2039346_2040486_+	glycoside hydrolase family 105 protein	NA	NA	NA	NA
WP_004151452.1\|2040547_2042281_-\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	1.4e-87	33.8
WP_002911491.1\|2042516_2043086_+	VOC family protein	NA	NA	NA	NA
WP_032418796.1\|2043162_2043906_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_023316208.1\|2043987_2044992_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_002911486.1\|2044988_2045732_-	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.1e-25	30.0
WP_002911484.1\|2045771_2046167_-	membrane protein	NA	NA	NA	NA
WP_002911483.1\|2046219_2047038_-	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	1.1e-60	82.7
WP_004145564.1\|2047034_2047601_-	hydrolase	NA	NA	NA	NA
WP_002911479.1\|2047868_2049656_+\|tRNA	aspartate--tRNA ligase	A0A2K9L3L6	Tupanvirus	1.3e-11	27.2

DBSCAN-SWA_5

2138119 : 2186812

Staphylococcus_phage(22.22%)

protease,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032418810.1\|2138119_2138866_+\|protease	proteasome-type protease	NA	NA	NA	NA
WP_004211065.1\|2139304_2140291_+	fatty acid desaturase	NA	NA	NA	NA
WP_032418811.1\|2140283_2141084_+	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA
WP_004145488.1\|2141121_2141244_-	nitrilotriacetate monooxygenase	NA	NA	NA	NA
WP_004148811.1\|2141271_2141457_-	hypothetical protein	NA	NA	NA	NA
WP_002910764.1\|2141861_2142803_+	transcriptional regulator TdcA	NA	NA	NA	NA
WP_002910762.1\|2142896_2143886_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA
WP_004145486.1\|2143911_2145243_+	threonine/serine transporter TdcC	NA	NA	NA	NA
WP_020804920.1\|2145270_2146479_+	propionate kinase	NA	NA	NA	NA
WP_020804899.1\|2146507_2148802_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	2.6e-158	41.7
WP_020804919.1\|2149231_2150347_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004175489.1\|2150456_2151371_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_032418812.1\|2151380_2152667_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
WP_004148803.1\|2152663_2153539_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	9.5e-05	41.5
WP_002910721.1\|2153535_2154255_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.5e-11	26.0
WP_002910720.1\|2154260_2155154_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004180410.1\|2155437_2157081_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.7e-136	50.4
WP_002910717.1\|2157130_2157607_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002910715.1\|2157705_2158632_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004175494.1\|2158935_2160231_+	MFS transporter	Q6JIH2	Burkholderia_virus	9.6e-62	36.8
WP_004175495.1\|2160245_2161052_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004152315.1\|2161026_2161926_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002910657.1\|2162035_2162518_-	cold shock domain-containing protein	NA	NA	NA	NA
WP_004197491.1\|2162708_2163407_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	2.6e-05	27.2
WP_004899028.1\|2163432_2164017_-	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_002910650.1\|2164086_2164416_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_077254994.1\|2164502_2164748_+	hypothetical protein	NA	NA	NA	NA
WP_071890448.1\|2164757_2164937_-	hypothetical protein	NA	NA	NA	NA
WP_004200314.1\|2164984_2166325_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_000608644.1\|2166513_2167776_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_000239590.1\|2168031_2168907_+	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
WP_001393253.1\|2168953_2169286_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
WP_004180407.1\|2169297_2169951_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_032418814.1\|2169954_2171652_+	OmpA family protein	NA	NA	NA	NA
WP_071891524.1\|2174741_2176769_+	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JIA8	uncultured_Caudovirales_phage	5.2e-70	30.0
WP_140561747.1\|2178170_2178578_+	hypothetical protein	NA	NA	NA	NA
WP_004899008.1\|2178603_2178861_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_032418815.1\|2178865_2180077_+	hypothetical protein	NA	NA	NA	NA
WP_117008229.1\|2183039_2184803_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_024622680.1\|2184802_2185849_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_032418817.1\|2185823_2186366_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_032418818.1\|2186368_2186812_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_6

2858571 : 2869458

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032419001.1\|2858571_2861679_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
WP_032419002.1\|2861733_2862999_+	MFS transporter	NA	NA	NA	NA
WP_001620097.1\|2863029_2864118_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_004176262.1\|2864204_2864465_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_001620095.1\|2864762_2865623_+	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
WP_002210513.1\|2865643_2866405_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_117008240.1\|2866665_2867568_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.3e-158	99.3
WP_004224682.1\|2867579_2868845_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	7.8e-234	99.8
WP_002210516.1\|2868837_2869458_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_7

3576706 : 3586180

Brazilian_cedratvirus(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023158537.1\|3576706_3578428_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_002898014.1\|3578472_3579174_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3579527_3579746_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_117008244.1\|3579876_3582156_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.8e-165	41.9
WP_002896520.1\|3582186_3582504_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3582829_3583051_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_117008243.1\|3583127_3585068_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896440.1\|3585064_3586180_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_8

4095959 : 4143109

Cronobacter_phage(24.07%)

holin,terminase,head,integrase,tRNA

attL 4092913:4092958|attR 4140181:4140226

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4092913:4092958	attL	NA	NA	NA	NA
WP_032419291.1\|4095959_4098437_-	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	2.6e-196	45.3
WP_032419292.1\|4098423_4098819_-	hypothetical protein	F1C5F2	Cronobacter_phage	3.6e-36	54.8
WP_032419293.1\|4098815_4099286_-	hypothetical protein	R9TPR6	Aeromonas_phage	9.6e-28	40.4
WP_117008211.1\|4099285_4099705_-	hypothetical protein	A0A2P1MXB5	Escherichia_phage	2.6e-29	47.1
WP_074513099.1\|4099874_4100045_+	ATP-NAD kinase	NA	NA	NA	NA
WP_029884074.1\|4100253_4100496_-	hypothetical protein	NA	NA	NA	NA
WP_074513100.1\|4100495_4103108_-	tape measure protein	A0A1B1W284	Salmonella_phage	2.7e-79	33.8
WP_032415940.1\|4103164_4103680_-	hypothetical protein	NA	NA	NA	NA
WP_023342743.1\|4103754_4103967_-	hypothetical protein	H6WRV2	Salmonella_phage	1.0e-13	58.8
WP_032426232.1\|4104046_4104406_-	hypothetical protein	A0A1V0E5N7	Salmonella_phage	6.8e-34	54.2
WP_074513101.1\|4104539_4105514_-	hypothetical protein	A0A0M4REH5	Salmonella_phage	1.3e-79	79.0
WP_074513112.1\|4105581_4105743_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_074513102.1\|4105821_4106073_+	Arc family DNA-binding protein	B9UDL4	Salmonella_phage	9.0e-25	67.9
WP_074513103.1\|4106075_4106483_+	hypothetical protein	NA	NA	NA	NA
WP_074513104.1\|4106498_4106678_-	hypothetical protein	NA	NA	NA	NA
WP_074513105.1\|4106835_4107393_-	Rha family transcriptional regulator	A0A088CBJ5	Shigella_phage	1.6e-85	86.4
WP_074513106.1\|4107609_4108323_-	hypothetical protein	G0ZNE7	Cronobacter_phage	6.2e-63	54.2
WP_023339086.1\|4109214_4109598_-	hypothetical protein	NA	NA	NA	NA
WP_073546891.1\|4109594_4109963_-	hypothetical protein	F1C5E3	Cronobacter_phage	2.9e-48	83.6
WP_073546892.1\|4110014_4110569_-	hypothetical protein	A0A2I7S010	Vibrio_phage	4.3e-35	39.7
WP_040229587.1\|4110666_4111029_-	hypothetical protein	G0ZNE2	Cronobacter_phage	4.3e-28	52.5
WP_048336937.1\|4111028_4111202_-	hypothetical protein	I6R0P9	Salmonella_phage	4.1e-13	54.4
WP_004191534.1\|4111201_4111582_-	hypothetical protein	F1C5E2	Cronobacter_phage	3.1e-29	55.3
WP_032419306.1\|4111584_4111878_-	hypothetical protein	NA	NA	NA	NA
WP_004178847.1\|4111887_4112985_-	hypothetical protein	F1C5E1	Cronobacter_phage	4.2e-151	73.6
WP_012967726.1\|4112996_4113428_-	hypothetical protein	F1C5E0	Cronobacter_phage	6.2e-42	60.8
WP_047680688.1\|4113431_4114817_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	2.7e-155	60.2
WP_047680685.1\|4114829_4115012_-	hypothetical protein	NA	NA	NA	NA
WP_077269087.1\|4115076_4115691_-	HNH endonuclease	A0A2I7S0H7	Vibrio_phage	1.6e-30	43.9
WP_073546894.1\|4115763_4116768_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	1.8e-108	66.0
WP_032419309.1\|4116694_4118164_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	1.2e-148	56.1
WP_032419310.1\|4118176_4119649_-\|terminase	terminase	A0A1W6JNY3	Morganella_phage	6.9e-250	82.9
WP_032419311.1\|4119648_4120251_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	3.1e-79	78.7
WP_032419312.1\|4120688_4121039_-	hypothetical protein	A0A0K2FIW3	Enterobacter_phage	7.6e-14	42.9
WP_032419505.1\|4121035_4121533_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	4.8e-78	83.0
WP_012542609.1\|4121510_4121780_-\|holin	holin	K7P6H9	Enterobacteria_phage	2.8e-32	78.3
WP_032419313.1\|4121999_4122539_-	HNH endonuclease	A5PJ37	Escherichia_virus	2.1e-34	46.1
WP_060578954.1\|4122976_4123666_-	antiterminator	I6PDF8	Cronobacter_phage	1.0e-57	54.9
WP_060578953.1\|4123662_4123803_-	YlcG family protein	NA	NA	NA	NA
WP_060578952.1\|4123799_4124441_-	HNH endonuclease	A0A2H4JH74	uncultured_Caudovirales_phage	8.4e-35	40.7
WP_060578951.1\|4124437_4125076_-	hypothetical protein	H6WRY9	Salmonella_phage	2.8e-70	65.1
WP_023342724.1\|4125068_4125239_-	hypothetical protein	G8C7V4	Escherichia_phage	5.7e-15	73.2
WP_064147790.1\|4125238_4125694_-	hypothetical protein	K7P7B8	Enterobacteria_phage	1.5e-54	68.2
WP_064147791.1\|4125945_4126227_-	hypothetical protein	A0A220NQY7	Salmonella_phage	1.0e-05	40.2
WP_077267114.1\|4126219_4126678_-	DUF551 domain-containing protein	A0A193GYX5	Enterobacter_phage	2.5e-28	91.5
WP_023339691.1\|4127144_4127333_-	hypothetical protein	A0A192Y8X2	Salmonella_phage	3.7e-23	88.7
WP_064147793.1\|4127793_4128039_-	hypothetical protein	NA	NA	NA	NA
WP_077267115.1\|4128035_4128482_-	hypothetical protein	K7P858	Enterobacteria_phage	4.1e-20	42.8
WP_012542626.1\|4128484_4128778_-	protein ren	O48423	Enterobacteria_phage	2.5e-26	65.6
WP_117008209.1\|4128777_4130208_-	AAA family ATPase	Q9MCT4	Escherichia_phage	9.0e-186	67.2
WP_117008208.1\|4130197_4131097_-	DNA replication protein	F1C5C3	Cronobacter_phage	2.7e-87	54.5
WP_004139615.1\|4131321_4131543_-	bacteriophage CII family protein	NA	NA	NA	NA
WP_032431544.1\|4131583_4131811_-	Cro/Cl family transcriptional regulator	A0A2I6PIE5	Escherichia_phage	5.6e-18	61.2
WP_032431543.1\|4131879_4132602_+	helix-turn-helix transcriptional regulator	E7C9R0	Salmonella_phage	4.7e-74	62.8
WP_020804196.1\|4132624_4132744_+	hypothetical protein	NA	NA	NA	NA
WP_008807814.1\|4133283_4133490_+	phage encoded cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	1.4e-31	94.1
WP_060568332.1\|4133571_4133856_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	3.3e-39	79.8
WP_060578943.1\|4133865_4134780_+	DNA recombinase	G8C7T0	Escherichia_phage	1.0e-158	91.4
WP_064147796.1\|4134776_4135259_+	siphovirus Gp157 family protein	G8C7S9	Escherichia_phage	3.1e-74	92.5
WP_055316540.1\|4135293_4135599_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_055316537.1\|4135595_4136252_+	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-113	87.0
WP_032419330.1\|4136248_4137385_+	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	7.4e-159	73.1
WP_032419331.1\|4137600_4137873_+	hypothetical protein	Q716F1	Shigella_phage	3.7e-24	63.5
WP_032419332.1\|4137869_4138574_+	hypothetical protein	A0A1W6JP46	Morganella_phage	1.0e-25	34.3
WP_040182114.1\|4138570_4138789_+	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	4.4e-12	52.2
WP_072032585.1\|4138790_4139126_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_021441323.1\|4139002_4140166_+\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	2.9e-203	87.1
WP_072032583.1\|4140235_4140559_-	hypothetical protein	NA	NA	NA	NA
4140181:4140226	attR	NA	NA	NA	NA
WP_004143017.1\|4140597_4141464_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
WP_004143016.1\|4141465_4141678_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004143010.1\|4141723_4143109_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP041084

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1727 : 61046

uncultured_Caudovirales_phage(31.25%)

integrase,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001515717.1\|1727_2468_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	5.4e-25	58.6
WP_004152065.1\|3611_4559_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	1.8e-12	30.6
WP_071527918.1\|4585_4897_-	EAL domain-containing protein	NA	NA	NA	NA
WP_004152067.1\|4961_5885_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.1e-175	98.4
WP_004197688.1\|6554_6812_-	hypothetical protein	NA	NA	NA	NA
WP_140561822.1\|7413_8868_+	EAL domain-containing protein	NA	NA	NA	NA
WP_004152070.1\|9850_11128_-	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_004178088.1\|11190_13188_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	9.7e-21	25.9
WP_085955172.1\|14227_15435_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-100	63.2
WP_004178091.1\|16863_17295_-	silver-binding protein SilE	NA	NA	NA	NA
WP_003032875.1\|17545_19021_-	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.0e-27	30.1
WP_117241251.1\|19013_19694_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	1.0e-30	35.1
WP_000475512.1\|19883_21269_+	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_001246153.1\|21297_21651_+	cation efflux system protein CusF	NA	NA	NA	NA
WP_004152079.1\|21764_23057_+	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
WP_004098958.1\|23067_26214_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	4.0e-61	22.5
WP_000758228.1\|26300_26741_+	hypothetical protein	NA	NA	NA	NA
WP_004098955.1\|26867_29315_+	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	7.6e-84	35.8
WP_000843497.1\|29355_29553_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_004118669.1\|29586_30324_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
WP_001023257.1\|30612_31062_-	copper resistance protein	NA	NA	NA	NA
WP_000925242.1\|31295_33113_+	multicopper oxidase PcoA	NA	NA	NA	NA
WP_001242438.1\|33112_34009_+	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_000025662.1\|34048_34429_+	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
WP_004118344.1\|34433_35363_+	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
WP_001188930.1\|35417_36098_+	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4
WP_004152084.1\|36094_37495_+	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	4.1e-18	26.3
WP_004152085.1\|37711_38146_+	copper resistance system metallochaperone PcoE	NA	NA	NA	NA
WP_004152086.1\|38377_38557_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_031944101.1\|40299_40809_+	major intrinsic protein MIP	NA	NA	NA	NA
WP_004152091.1\|40858_41356_-	N-acetyltransferase	NA	NA	NA	NA
WP_004152092.1\|41687_42014_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_085903505.1\|42013_42724_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	2.9e-92	77.0
WP_004182005.1\|42732_43278_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_004152095.1\|43353_43716_+	arsenic metallochaperone ArsD family protein	NA	NA	NA	NA
WP_004152096.1\|45612_46149_+	N-acetyltransferase	NA	NA	NA	NA
WP_004152097.1\|46181_46607_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	72.9
WP_004152098.1\|46619_47909_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.9e-171	74.0
WP_004152099.1\|47956_49708_-	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA
WP_004152100.1\|49725_50088_-	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_004152101.1\|50137_50488_-	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	1.4e-23	50.9
WP_004152102.1\|50845_51115_+	hypothetical protein	NA	NA	NA	NA
WP_004152103.1\|51102_51678_+	hypothetical protein	NA	NA	NA	NA
WP_004152104.1\|51708_52203_+	DNA-binding protein	NA	NA	NA	NA
WP_004152105.1\|52246_52615_+	hypothetical protein	NA	NA	NA	NA
WP_004152106.1\|52648_52852_+	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_004152107.1\|52900_53158_+	hypothetical protein	NA	NA	NA	NA
WP_004152108.1\|53233_53488_+	hypothetical protein	NA	NA	NA	NA
WP_003026799.1\|53663_53930_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_003026803.1\|53917_54400_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001567368.1\|54600_56004_+\|transposase	ISNCY-like element ISKpn21 family transposase	NA	NA	NA	NA
WP_001567369.1\|56032_56665_-	hypothetical protein	NA	NA	NA	NA
WP_020314316.1\|56894_58241_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_004152113.1\|60083_61046_-\|protease	M48 family metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_2

66533 : 94813

Escherichia_phage(30.77%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004118209.1\|66533_66797_+\|transposase	transposase	NA	NA	NA	NA
WP_000019473.1\|67998_68979_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_004159231.1\|69155_69482_+	hypothetical protein	NA	NA	NA	NA
WP_004152692.1\|70187_71057_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004152693.1\|71050_72061_-	phosphonate dehydrogenase PtxD	A0A1V0SBV6	Catovirus	1.4e-15	25.1
WP_004152694.1\|72069_72897_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_004152695.1\|72905_73769_-	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004153729.1\|73765_74593_-	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-20	37.6
WP_004217321.1\|75448_76153_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_073972769.1\|76188_76734_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	2.2e-31	51.6
WP_004197546.1\|76763_77630_-	class A beta-lactamase SCO-1	A0A1B0VBP7	Salmonella_phage	5.3e-56	42.0
WP_004197531.1\|77791_78991_+	cellulase family glycosylhydrolase	NA	NA	NA	NA
WP_000019473.1\|80009_80990_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_124045295.1\|81047_81290_+	hypothetical protein	NA	NA	NA	NA
WP_004197540.1\|81325_82603_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	6.7e-84	44.2
WP_004197551.1\|82608_83037_-	peptidase S24	A0A1W6JNS2	Morganella_phage	1.3e-15	39.5
WP_004197545.1\|83132_83405_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_085947932.1\|83529_84289_+\|transposase	IS5-like element ISKpn12 family transposase	A0A0N9SJT9	Paenibacillus_phage	2.0e-11	38.8
WP_002063129.1\|84357_84909_+	hypothetical protein	NA	NA	NA	NA
WP_004197549.1\|85181_85367_+	hypothetical protein	NA	NA	NA	NA
WP_001189111.1\|85983_87492_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8
WP_031944099.1\|87800_88205_+	hypothetical protein	NA	NA	NA	NA
WP_031944096.1\|88893_89187_-	hypothetical protein	NA	NA	NA	NA
WP_000557452.1\|89199_90060_-	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA
WP_001235713.1\|91241_91799_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_140561825.1\|93832_94813_-\|transposase	IS5 family transposase	Q38213	Escherichia_phage	1.3e-183	98.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP041083

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP041086

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP041082

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP041084

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection