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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP033965 Klebsiella pneumoniae strain L482 plasmid p6_L382, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP033963 Klebsiella pneumoniae strain L482 plasmid p4_L382, complete sequence 0 crisprs RT 0 0 2 0
NZ_CP033964 Klebsiella pneumoniae strain L482 plasmid p5_L382, complete sequence 0 crisprs RT 0 0 0 0
NZ_CP033962 Klebsiella pneumoniae strain L482 plasmid p3_L382, complete sequence 0 crisprs RT 0 0 3 0
NZ_CP033961 Klebsiella pneumoniae strain L482 plasmid p2_L382, complete sequence 0 crisprs RT 0 0 1 0
NZ_CP033960 Klebsiella pneumoniae strain L482 chromosome, complete genome 2 crisprs RT,csa3,cas3,DEDDh,DinG,WYL 0 0 12 0

Results visualization

1. NZ_CP033962
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1796 : 20405 23 Escherichia_phage(62.5%) transposase,protease NA
DBSCAN-SWA_2 66525 : 75708 10 Escherichia_phage(42.86%) NA NA
DBSCAN-SWA_3 99163 : 127675 35 Escherichia_phage(27.78%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP033961
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 80157 : 144954 61 Caulobacter_phage(14.29%) integrase,protease,transposase attL 85866:85881|attR 140932:140947
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP033963
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 20096 : 30400 14 Escherichia_phage(44.44%) transposase NA
DBSCAN-SWA_2 33710 : 42140 9 Pseudomonas_phage(16.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP033960
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP033960_1 1831264-1831416 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP033960_2 4613587-4613681 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 479028 : 568325 116 Enterobacteria_phage(26.98%) holin,tail,portal,capsid,protease,terminase,head,tRNA,integrase attL 467610:467627|attR 532550:532567
DBSCAN-SWA_2 1274580 : 1323724 63 Salmonella_phage(80.0%) plate,portal,tail,capsid,transposase,terminase,coat,head,tRNA,integrase,lysis attL 1266171:1266187|attR 1301197:1301213
DBSCAN-SWA_3 1428440 : 1494269 71 Salmonella_phage(36.73%) holin,tail,protease,transposase,terminase,integrase attL 1429435:1429452|attR 1497017:1497034
DBSCAN-SWA_4 1803924 : 1810830 6 Planktothrix_phage(33.33%) tRNA NA
DBSCAN-SWA_5 1851362 : 1867108 16 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_6 2820257 : 2831144 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_7 3060550 : 3099016 58 uncultured_Caudovirales_phage(32.65%) integrase,terminase attL 3090129:3090143|attR 3096138:3096152
DBSCAN-SWA_8 3131949 : 3186042 64 Enterobacteria_phage(33.33%) integrase,protease,holin,transposase attL 3131731:3131746|attR 3161400:3161415
DBSCAN-SWA_9 3284274 : 3384565 108 Klebsiella_phage(39.22%) tail,portal,transposase,terminase,head,tRNA,integrase,lysis attL 3320479:3320493|attR 3382376:3382390
DBSCAN-SWA_10 3600544 : 3697315 98 Salmonella_phage(55.0%) plate,tail,portal,capsid,protease,terminase,tRNA,head,integrase,lysis attL 3656070:3656088|attR 3697390:3697408
DBSCAN-SWA_11 4350299 : 4361952 13 Enterobacteria_phage(70.0%) integrase attL 4350749:4350763|attR 4373805:4373819
DBSCAN-SWA_12 4831390 : 4840915 10 Enterobacteria_phage(83.33%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage