CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP041169	Alteromonas mediterranea strain PT11 chromosome, complete genome	2 crisprs	DEDDh,WYL,cas3,Cas9_archaeal,csa3,DinG	3	0	2	0

1. NZ_CP041169

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041169_1

• CRISPR_ID: NZ_CP041169_1
• CRISPR_location: 2580901-2581542
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 10 spacers

Consensus repeat of NZ_CP041169_1

Consensus_repeat	Method
CTCTGCTTCTTCATCTGCGGCTTCGCCTGCTGNTTCGTCTTC	CRT

spacers of NZ_CP041169_1

>1.1|2580943|18|NZ_CP041169|CRT
TTCCGGCGCTGGCTCTAG
>1.2|2581003|18|NZ_CP041169|CRT
TTCCGGCGCTGGCTCTAG
>1.3|2581063|18|NZ_CP041169|CRT
TTCGGGCGCTGGCTCTAA
>1.4|2581123|18|NZ_CP041169|CRT
TTCGGGCGCTGGCTCTCG
>1.5|2581183|18|NZ_CP041169|CRT
CTCGGGCGCTGGCTCTAA
>1.6|2581243|18|NZ_CP041169|CRT
TTCGAGCGCAGGCTCTAA
>1.7|2581303|18|NZ_CP041169|CRT
TTCCGGCGCTGGCTCTAA
>1.8|2581363|18|NZ_CP041169|CRT
CTCGGGCGCTGGCTCTCG
>1.9|2581423|18|NZ_CP041169|CRT
TTTGAGCGTAGGCTCTAA
>1.10|2581483|18|NZ_CP041169|CRT
CTCGGGCGCTGGCTCTCG

CRISPR arrays and Neighbor proteins around NZ_CP041169_1

CRISPR arrays

The CRISPR arrays of NZ_CP041169_1

>merge|NZ_CP041169|1|2580901-2581542|CRT
CTCTGCTTCTTCATCTGCGGCTTCGCCTGCTGATTCGTTTTCTTCCGGCGCTGGCTCTAGAGCTGCTTCATCATCTGCGGCATCGCCTGCTGATTCGTCTTCTTCCGGCGCTGGCTCTAGAGCCGCTTCATCATCTGCGGCTTCGCCTGCTGATTCGTCTTCTTCGGGCGCTGGCTCTAACTCTGCTGCTTCATCTGCGGCTTCGCCTGCTGATTCGTCTTCTTCGGGCGCTGGCTCTCGCTCTGCTTCTTCATCTGCGGCCTCGCCTGCTGATTCGTCTTCCTCGGGCGCTGGCTCTAACTCTGCTTCTTCATCTGCGGCCTCGCCTGCTGATTCGTCTTCTTCGAGCGCAGGCTCTAACTCAGCTTCTTCATCTGCGGCTTCGCCTGCTGGTTCGTCTTCTTCCGGCGCTGGCTCTAACTCTGCTTCTTCATCTGCGGCTTCGCCTGCTGGTTCGTCTTCCTCGGGCGCTGGCTCTCGCTCTGCTTCTTCATCTGCGGCTTCGCCTGCTGGTTCGTCTTCTTTGAGCGTAGGCTCTAACTCTGCTTCTTCATCTGCGGCTTCGCCTGCTGGTTCGTCTTCCTCGGGCGCTGGCTCTCGCTCTGCTTCATCCTCTGCGGCTTCGTCGCTGTCCTGTACTGC

>NZ_CP041169|1|1|2580901-2581542|CRT
CTCTGCTTCTTCATCTGCGGCTTCGCCTGCTGATTCGTTTTC	TTCCGGCGCTGGCTCTAG
AGCTGCTTCATCATCTGCGGCATCGCCTGCTGATTCGTCTTC	TTCCGGCGCTGGCTCTAG
AGCCGCTTCATCATCTGCGGCTTCGCCTGCTGATTCGTCTTC	TTCGGGCGCTGGCTCTAA
CTCTGCTGCTTCATCTGCGGCTTCGCCTGCTGATTCGTCTTC	TTCGGGCGCTGGCTCTCG
CTCTGCTTCTTCATCTGCGGCCTCGCCTGCTGATTCGTCTTC	CTCGGGCGCTGGCTCTAA
CTCTGCTTCTTCATCTGCGGCCTCGCCTGCTGATTCGTCTTC	TTCGAGCGCAGGCTCTAA
CTCAGCTTCTTCATCTGCGGCTTCGCCTGCTGGTTCGTCTTC	TTCCGGCGCTGGCTCTAA
CTCTGCTTCTTCATCTGCGGCTTCGCCTGCTGGTTCGTCTTC	CTCGGGCGCTGGCTCTCG
CTCTGCTTCTTCATCTGCGGCTTCGCCTGCTGGTTCGTCTTC	TTTGAGCGTAGGCTCTAA
CTCTGCTTCTTCATCTGCGGCTTCGCCTGCTGGTTCGTCTTC	CTCGGGCGCTGGCTCTCG
CTCTGCTTCATCCTCTGCGGCTTCGTCGCTGTCCTGTACTGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041169.1|WP_071951881.1|2584451_2585468_-|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|237845
NZ_CP041169.1|WP_141152336.1|2571696_2572479_+|tRNA-(ms[2]io[6]A)-hydroxylase	unknown	unknown	gnl|CDD|114868
NZ_CP041169.1|WP_015067525.1|2574882_2575371_-|colicin-V-production-protein	unknown	unknown	gnl|CDD|182773
NZ_CP041169.1|WP_071967894.1|2587877_2588567_+|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
NZ_CP041169.1|WP_141152341.1|2592320_2594645_+|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224446
NZ_CP041169.1|WP_141152342.1|2594648_2595122_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl|CDD|224991
NZ_CP041169.1|WP_071967896.1|2588995_2589226_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl|CDD|226136
NZ_CP041169.1|WP_141152335.1|2569152_2570748_-|carboxypeptidase	unknown	unknown	gnl|CDD|225490
NZ_CP041169.1|WP_071951873.1|2570924_2571530_-|DUF479-domain-containing-protein	unknown	unknown	gnl|CDD|225666
NZ_CP041169.1|WP_141152338.1|2578627_2579425_-|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl|CDD|234577
NZ_CP041169.1|WP_071967895.1|2588702_2588999_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl|CDD|226194
NZ_CP041169.1|WP_071951876.1|2577492_2578338_-|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta	unknown	unknown	gnl|CDD|235547
NZ_CP041169.1|WP_071967897.1|2589572_2590472_-|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|182990
NZ_CP041169.1|WP_141152337.1|2573344_2574868_-|amidophosphoribosyltransferase	unknown	unknown	gnl|CDD|236427
NZ_CP041169.1|WP_071951882.1|2585497_2586706_-|4-phosphoerythronate-dehydrogenase	unknown	unknown	gnl|CDD|240635
NZ_CP041169.1|WP_081365743.1|2576161_2577493_-|bifunctional-tetrahydrofolate-synthase/dihydrofolate-synthase	unknown	unknown	gnl|CDD|182774
NZ_CP041169.1|WP_071967898.1|2590588_2591503_+|DMT-family-transporter	unknown	unknown	gnl|CDD|183067
NZ_CP041169.1|WP_012518831.1|2575501_2576113_-|dedD-protein	unknown	unknown	gnl|CDD|236940
NZ_CP041169.1|WP_141152340.1|2586946_2587702_-|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl|CDD|235916
NZ_CP041169.1|WP_012518451.1|2572685_2573285_+|YIP1-family-protein	unknown	unknown	gnl|CDD|369140

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP041169.1|WP_071951881.1|2584451_2585468_-|aspartate-semialdehyde-dehydrogenase	gnl|CDD|237845	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional.	0
NZ_CP041169.1|WP_141152336.1|2571696_2572479_+|tRNA-(ms[2]io[6]A)-hydroxylase	gnl|CDD|114868	pfam06175, MiaE, tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE). This family consists of several bacterial tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) proteins. The modified nucleoside 2-methylthio-N-6-isopentenyl adenosine (ms2i6A) is present at position 37 (3' of the anticodon) of tRNAs that read codons beginning with U except tRNA(I,V Ser) in Escherichia coli. Salmonella typhimurium 2-methylthio-cis-ribozeatin (ms2io6A) is found in tRNA, probably in the corresponding species that have ms2i6A in E. coli. The miaE gene is absent in E. coli, a finding consistent with the absence of the hydroxylated derivative of ms2i6A in this species.	1.47355e-90
NZ_CP041169.1|WP_015067525.1|2574882_2575371_-|colicin-V-production-protein	gnl|CDD|182773	PRK10845, PRK10845, colicin V production protein; Provisional.	1.24442e-64
NZ_CP041169.1|WP_071967894.1|2587877_2588567_+|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	2.32689e-39
NZ_CP041169.1|WP_141152341.1|2592320_2594645_+|molybdopterin-dependent-oxidoreductase	gnl|CDD|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	2.02145e-47
NZ_CP041169.1|WP_141152342.1|2594648_2595122_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl|CDD|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.97624e-70
NZ_CP041169.1|WP_071967896.1|2588995_2589226_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl|CDD|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	1.53128e-12
NZ_CP041169.1|WP_141152335.1|2569152_2570748_-|carboxypeptidase	gnl|CDD|225490	COG2939, COG2939, Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism].	1.00858e-53
NZ_CP041169.1|WP_071951873.1|2570924_2571530_-|DUF479-domain-containing-protein	gnl|CDD|225666	COG3124, COG3124, Uncharacterized protein conserved in bacteria [Function unknown].	8.47852e-35
NZ_CP041169.1|WP_141152338.1|2578627_2579425_-|tRNA-pseudouridine(38-40)-synthase-TruA	gnl|CDD|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	4.90452e-137
NZ_CP041169.1|WP_071967895.1|2588702_2588999_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl|CDD|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	3.95396e-20
NZ_CP041169.1|WP_071951876.1|2577492_2578338_-|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta	gnl|CDD|235547	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta.	0
NZ_CP041169.1|WP_071967897.1|2589572_2590472_-|LysR-family-transcriptional-regulator	gnl|CDD|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	2.54858e-69
NZ_CP041169.1|WP_141152337.1|2573344_2574868_-|amidophosphoribosyltransferase	gnl|CDD|236427	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional.	0
NZ_CP041169.1|WP_071951882.1|2585497_2586706_-|4-phosphoerythronate-dehydrogenase	gnl|CDD|240635	cd12158, ErythrP_dh, D-Erythronate-4-Phosphate Dehydrogenase NAD-binding and catalytic domains. D-Erythronate-4-phosphate Dehydrogenase (E. coli gene PdxB), a D-specific 2-hydroxyacid dehydrogenase family member, catalyzes the NAD-dependent oxidation of erythronate-4-phosphate, which is followed by transamination to form 4-hydroxy-L-threonine-4-phosphate within the de novo biosynthesis pathway of vitamin B6. D-Erythronate-4-phosphate dehydrogenase has the common architecture shared with D-isomer specific 2-hydroxyacid dehydrogenases but contains an additional C-terminal dimerization domain in addition to an NAD-binding domain and the "lid" domain. The lid domain corresponds to the catalytic domain of phosphoglycerate dehydrogenase and other proteins of the D-isomer specific 2-hydroxyacid dehydrogenase family, which include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence.	6.36781e-131
NZ_CP041169.1|WP_081365743.1|2576161_2577493_-|bifunctional-tetrahydrofolate-synthase/dihydrofolate-synthase	gnl|CDD|182774	PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional.	7.75548e-148
NZ_CP041169.1|WP_071967898.1|2590588_2591503_+|DMT-family-transporter	gnl|CDD|183067	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional.	4.74159e-16
NZ_CP041169.1|WP_012518831.1|2575501_2576113_-|dedD-protein	gnl|CDD|236940	PRK11633, PRK11633, cell division protein DedD; Provisional.	5.46546e-28
NZ_CP041169.1|WP_141152340.1|2586946_2587702_-|class-II-aldolase/adducin-family-protein	gnl|CDD|235916	PRK07044, PRK07044, aldolase II superfamily protein; Provisional.	9.16525e-152
NZ_CP041169.1|WP_012518451.1|2572685_2573285_+|YIP1-family-protein	gnl|CDD|369140	pfam06930, DUF1282, Protein of unknown function (DUF1282). This family consists of several hypothetical proteins of around 200 residues in length. The function of this family is unknown although a number of family members are thought to be putative membrane proteins.	1.01444e-32

Protein sequences

>NZ_CP041169.1|WP_141152338.1|2578627_2579425_-|tRNA-pseudouridine(38-40)-synthase-TruA
MGRIALGIEYDGAAVYGWQRQREVPSVQEHLEKALSTVANEPIEVQCAGRTDAGVHATGQVVHFNCDAPRSERAWTLGVNANLPNSVAVTWAKNVADDFHARFSATHRRYRYVIHNAKMRPAILSSGVTHIHRELDEKKMHLAAQALLGEQDFTSFRAALCQSKTPFRNVTNVSVYRQGRYVIIDIRANAFLHHMVRNITGALVEIGAGEQDVNWIAHLLSLKDRSKSAATAKPNGLYLVDVTYPEEHGLPKPPLGPLFLPETKT
>NZ_CP041169.1|WP_071951876.1|2577492_2578338_-|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta
MSWIQKILPRTQTSHKGNVPEGIWTKCGSCQAVLYKSELEKLQEVCPKCDHHMRITARRRIDAFLDDGDRLELGAEHEPQDVLKFKDSKRYKDRIVAAQKSTNEKDALVVMQGKLKGMPVVVACFEFAFMGGSMASVVGARFVAAVNACLENDMPLICFSASGGARMQEALMSLMQMAKTSAALAKMSKKGLPYISVLTDPTMGGVSASLAMLGDINVAEPKALIGFAGPRVIEQTVREKLPEGFQRSEFLVEKGAIDMIVDRRDMRDRLHSLLVKLHYKN
>NZ_CP041169.1|WP_081365743.1|2576161_2577493_-|bifunctional-tetrahydrofolate-synthase/dihydrofolate-synthase
MNNENNLKAGSAPNAKEGTLSSNTQKSLGQWLSYLESIHPSAIDMGLDRVKAVAQSMALSLSQSLVITVAGTNGKGTTCRLLEQAMLSQGKSVAVYSSPHLTDYRERVRYNGELPPANEFVKAFEFVEKSRKETEGDPITLTYFEFGTLAAMKMMQSWEVDVVILEVGLGGRLDATNIIHPDLAIITTIDLDHQDWLGNTREKIAREKAGIMRKNGNAVVGDLFPPSSLYDVVNELQANVRWATQDFVTVVASDYSEWSWKGKNSSYASLPYPKIPLQNASTALAALEFLELLPEEQVVRDIIKNTTMPGRQETISESPLVVVDVAHNPQATAEMQNWLNRYDVSKMRIVVGMLKDKSIAETLAPLAALNADWYVASTSGPRGCEAEVLENALVNAGTTIENIETFQTVASAYQRALADYQTGELILVFGSFVTVADVLAEQN
>NZ_CP041169.1|WP_012518831.1|2575501_2576113_-|dedD-protein
MTSALKNRLVGTIIVVALAVIFLPDFLDGKKQTNREPFASVPANPPKKPIVDPEPFPSERVAKAAVPAVKLEDEKAIDDEPAQAQLSESSKANVAKSPQTKVIEEDKLASQTVVDTKSATADDDAGWVIQLGSFRHEKNVKALLAKLEKAGYRAFSRKIQTNSGPLNKVFVGPDLDKKKLESALPHLKELTSLKGKVTTFKVE
>NZ_CP041169.1|WP_015067525.1|2574882_2575371_-|colicin-V-production-protein
MNWVDFSILGIIAVSTLISLIRGFVKEAISLVVWFAALFISSNFYADLAVYFTAIDDPYLKNGAAIAALFVATLILGGMINYVISQLVLATGLSGTDRALGIVFGALRGVLIVSALLFFMDTFTSAATAAWWQASVLIPEFGVIIEWFFSYVKDSSSFLNPA
>NZ_CP041169.1|WP_141152337.1|2573344_2574868_-|amidophosphoribosyltransferase
MCGIVGIVGKTPVAQSLYDGLTVIQHRGQDAAGIMTIDQNMFNLRKANGLVRDVFHTRHMKRLSGNMGIGHVRYPTAGTSSSAEAQPFYVNSPFGIAFAHNGNLTNAHELQEEVFRIARRHINTTSDSELLLNILAHELQQVAGLSVSAEHIFEVVTKVHKKIRGAYAVVAAIIGQGIVAFRDPHGIRPLALGKRMSELGEEWMVASESVALDAVGFQFVRDVMPGEAVFITEESQLHTRQCAENPVTSPCIFEFVYFARPDSFIDGISVYASRVNMGRKLGEKIKREWADLDIDVVIPIPETSMDVALQIANTLELPYRQGFVKNRYIGRTFIMPGQTMRKKSVRRKLNAISSEFKGKSVLLVDDSIVRGTTSGQIIEMARESGAKKVYFASAAPEIRFPNVYGIDMPSANELIAYGREIDQIAELIQADGLIFQDISDLVEAVREENESIQRFETSVFDGNYITADIDQEYLERIDMSRGEQSRNAPVVQAELSNLDVHNIDAAD
>NZ_CP041169.1|WP_012518451.1|2572685_2573285_+|YIP1-family-protein
MILNHLIGIYTHPREEWQTIDTKHETYFYALTHIAFIALIPSLVAYYSSAHTGWSIGAGDVIRLSENTAIMMGIGMYFGLIGGVVALAVLIHELAKAFDATPTYTQSLELAAYTATPLFMVGFAGLYPELWVVMTALLVGISYSVYLLYSGVPILMHMPEDKGFIYSSSVVTCGLVLLVILMTGSVLLWGVTGGPVFVH
>NZ_CP041169.1|WP_141152336.1|2571696_2572479_+|tRNA-(ms[2]io[6]A)-hydroxylase
MSVISPSEVTSLLSPVNAFLHCETPRSWINEAQKEENLRVILTDHLICELKAAQSAMYLLRRYVADEETSKVLLGWLKPYEDFTYRHEGDWQSLNTKHLSKSVFNVEGLDPFKKDMLDKMVMLIKEELHHFYQVLEIMHELGFEYKSVTSSRYANGLLRHVRTYEPEKLVDKLVCGAYIEARSCERFAKLAPHVSEDLGKFYVSLLRSEARHFEDYLTLASQISKTDISERINHFGSVEKSLIESDDNELRFHSGAPDFT
>NZ_CP041169.1|WP_071951873.1|2570924_2571530_-|DUF479-domain-containing-protein
MNYLAHLFLARPTADSHFGNLLGDFRRGVDINTFGNAVRLGLKNHYEVDRFTDRHETVLAAKTLFHKSRRRFAPVALDIYFDHLLIKHWATFTPQGFDDFREQSFALLEKRLPSMPRAMQLSIGHMITHDWFEDYAREDGIAKAISVVAKRIRFANTFHKSVDDISEHQEEIEQLFLAFFPELIAHIENEGPENKSASRFK
>NZ_CP041169.1|WP_141152335.1|2569152_2570748_-|carboxypeptidase
MMKIYPSTLSASHHKGAKSGKAVSWFTVTLLVFASVIGVATAKDEGPVTHARSVEIDSSVVTEHETKILGKRVKYSATTGTQPVWNTKDEAVATLFYTYYQRTDVKENTERPLIISFNGGPGSASVWMHVAYTGPRILNIDDEGYPVQPYGIQTNPYSILDVADIVFVNPVNTGYSRVLPKADGSMPSQDEQQKMFFGVNADISYLADWVNTFVTRNNRWRSPKYLIGESYGTTRVSGLALELQNRQWMYLNGVVLVSPTDIGIERNGPVKAANRLPYFAAAAWYHNKLEPELQNKDLTELLPEVEDFTINTLIPALAKGGFIGDKEKREVLKQMARYSGLSEASIAQNNLDVSTAFFWKDLLRNEGKTLGRLDSRYLGIDAKQSGDRPDYWAELTSWLHSFTPAINYYLREELNYKTDMKYNMFGNVHPWDRSNNQTGQNLRLAMAQNPYLNVMIQAGYYDGATNYFDAKYTMWQLDQSGTLKDRLSFKGYRSGHMMYLRRDDLKQSNQDLREFIQASTPQKGAPAEYKR
>NZ_CP041169.1|WP_071951881.1|2584451_2585468_-|aspartate-semialdehyde-dehydrogenase
MSQAFDVAVLGATGLVGQTMIELLEERDFPVNRLYPLASKRSAGSTVSFKGEDIEVLDADDFDWSLVQLGFFSAGGSISAKFAPLAAEEGCIVIDNTSEFRYEPDIPLVVPEVNAHALAEFRNRNIIANPNCSTIQMMVALKPIQDAVGIDRINVCTYQSVSGAGKEAMEELAKQTAGLLNAREVKNEAFSRQIAFNVIPQIDVFQDNDYTKEEMKMVWETQKIMGDQSILVNATAVRVPVFYGHAEAIHLETSSPIDAQHVKELLADAPGVTVYDGNEQFPTQVSSASGNDIVHVGRIRNDISHPCGLNLWVVSDNIRKGAATNSIQIAETLIRDYL
>NZ_CP041169.1|WP_071951882.1|2585497_2586706_-|4-phosphoerythronate-dehydrogenase
MKILLEDTIPFGTDYLNSVGQVETYAWQSLVPEMLCDVDILALRSTTKVTPELLTNANKLKFVTTATAGTNHLDKIHLDKVGIAHSSAAGCNAVAVAEYVLSVLLHAQKAQKLGLYDATVGIVGAGNVGSALSRILTAIDVKHCLYDPPLQQALARTGKTLHNGQSFVDLAQIAKCDVISLHVPFIKDGDYPTYQMIDQTFLEALTSDQLLINACRGEVIDEEALLNLLQQEQAPTVVLDVFDNEPAINTALFDHVWFVTPHIAGHSVEGKVRGTQMIYEQICEVVGTARDKELSDFLDKTNPINAELASPEASRLSVEDLTAVFHKVYDVAIDDEITRNAFSSTSKNNEKTKSDVANTFSALRKQYRVRRECSAYALQLPKNTSKQIQNTFTKLGFSVSLV
>NZ_CP041169.1|WP_141152340.1|2586946_2587702_-|class-II-aldolase/adducin-family-protein
MTDSVKSKVSSEEWQTRVDLAACYRAVAMYGWDDLIFTHISARVPGPDHHFLINPYGLMFDEVTASSLVKVDLNGNKVMESEYDINPAGFTIHSAVHEVRDDAKCVLHLHTAEGVAVSILEDGLQPYSQQSLFPLASLSYHAYEGVALNPEEKARLVRDLGDTQFMILRNHGLLTCADNIPDAFLFMFIMQRACEIQLKAQATGKPLIPIHSAILDGIRAQAEQVTKQAGGSLAWPGIKRRVERRFPGYDK
>NZ_CP041169.1|WP_071967894.1|2587877_2588567_+|Crp/Fnr-family-transcriptional-regulator
MEKFKPILASSTWFSAIPSYLQEAMFEKTRLKHLKAGQQLHAKGEDGAGFYGVCEGRLRVVTVGVDGREMLFALLGPGTWFGEISMFDDLPRTHDNFCETNSTVAIIQKNAFKALLEQYPELYPHFTRLLCTRVRSAFQFIDSSAGLSLKHQLVKRLLMLTTSYGQHLPKNNAITLTLSQESLAQMINSSRQTVNQLLGELESEGLLKRHYGKITIPEPETLFSRYQFN
>NZ_CP041169.1|WP_071967895.1|2588702_2588999_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MNKYTLSNKAEDDISRIYDYSANIHGVTQAEAYLVALHEALVILAETPNMGTSVEDIRNSYLQFPVHRHMVFYKKVDDGIFVIRVLHQQMKYAMHLSD
>NZ_CP041169.1|WP_071967896.1|2588995_2589226_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MATLNVSLPDEMRTWIDEQVKTGKFANASDYIRDLVRRNQSEREAISLALIEGELSGKSDKNVLDIIQAKKARASK
>NZ_CP041169.1|WP_071967897.1|2589572_2590472_-|LysR-family-transcriptional-regulator
MLPNLNTLRVFESVARYQNFSLAAEELHLTQSAVAQRIRQLESDLDIVLFIRQARGLELTEAGLKYQHSIKTALAIINEATRAITQTPQHLVVSVPPSLGAKWLLPRMNEINDTFPHIELRIIASEKKTHFGTDGADFVIRFSQPPFDSTLHSECLSKINLCALASPTYINKNKKIERLADFAEHRLIEDAHENWGKLSKHIALPNASKVLRFEQTSLAIDAALAGQGICISPHMLVEQHLTNGELVLLRRIELSKEQGYFLLYPKNRNFVNDKHLVLRWLKVEMKKMEEKWIDWTRNS
>NZ_CP041169.1|WP_071967898.1|2590588_2591503_+|DMT-family-transporter
MQKHITLAAFISLGVIWGSNFIFMKWAAEWINATQITLLRVAFGFIPLLLVALFTRSLRKSHFAYWYHFVAMSVLATTLYYFAFAKGTALLPSSVAGMLSGSIPLFTFLAALFFLTGEPVNRNSVCGILLGFSGVVLIAAPWNTGAEQVNLTGVLYMTAGALSVGISFVYARKYVKPLNLNPIALATYQTGLSLLMLSIGTDLYDIDAVFQDTKAFIGLAVGLGVFGTGIAYIIYYFLVNRMGAIAASGVTYIPPVVALLIGALFVGESVSLIDILAMSLILIGVWRIQIARKNAFSKASSPDS
>NZ_CP041169.1|WP_141152341.1|2592320_2594645_+|molybdopterin-dependent-oxidoreductase
MTKSNHAEQIDTITSSQKHDQSDNGDEHIVEAENTGRRKFIGYMLKGSSFAVALHMTGGALRPQDANAQLLGIPELADELDLTDLLLISGDPFYYDYLIKITSDNRVRFELPRMEVGQGILTAAMMILAEELDVEMSSIDATLSPAEIRRATGQITGGSHAITSLWDPLRKVAAALLHKIKLSAAVHFGLSVNDISTENGFAIGNDGSRIAYSALTAGVEGRNDAARLAQPKDPSQYKIIGTQQKRVDARDIVTGKLDFAMDLDVVPDAMPTVVARPPSLGGRVITFDDSEAIGLPGVLAIREVPLDVDANSSGVAVVARSFGEAFRARDALNISWSEGAAENLSDAEVIEQLRAINLPTLPNIPLATDSVGGEFIFPYLAHAPMETMTALADATGSKIRVWTGAKTPLAAQAKIARELGVLPTDVEVNVIQSGGSFGRRLFFDAAVEGARISQIVNRPIKLMFTRQDDTKFGRARPLSLHNVKATYTRGFLIGKKVLSFDHRAATAELDLEHGFGDGITALGGELAPAAFSQTIWHSTQLVQYKFGVTSLLLNEKKFVVPTSSWRGIYSGTAAVANEIVVDELARAMKKDEYQFRLQMLDDDRSKAVLRKVYQEGNWGRSMEKGRAQGLGLHKEYKSRAAVLVELQTFKDPEKESKVTKIVVALDVNRVLNPTGLEAQVIGAATDAITYMIRTSLHLDNGAIRESSYGDFEIARMRNTPPDIEVHFMPPNGETPGGAGELVVPAAAAAIANAFARATGIAPRRFPLRDFYPEG
>NZ_CP041169.1|WP_141152342.1|2594648_2595122_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MPQITFNVNNNPVSIDAENDDELLYLLRDRLGITGPKYGCGVGVCGACTIFKDGELVRPCIVPMEDVEGASLTTIEGLAVDDILHPVQEAWINEDVAQCGFCQAGQILTAAKLLESNPNPNDDDIDEAMSDNICRCGTYHRIRKAIKHAAALIQQTS

Crispr_ID: NZ_CP041169_2

• CRISPR_ID: NZ_CP041169_2
• CRISPR_location: 3865789-3866262
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 8 spacers

Consensus repeat of NZ_CP041169_2

Consensus_repeat	Method
CNTCTTCTTCCGCTTGNGCTTTNGCCTGTGCTTCNG	CRT

spacers of NZ_CP041169_2

>2.1|3865825|18|NZ_CP041169|CRT
CTTCAGCTTTTAAGCGAG
>2.2|3865879|18|NZ_CP041169|CRT
CCTTTGCCTTTAAGCGAG
>2.3|3865933|18|NZ_CP041169|CRT
CCTCTGCCTTTAAGCGAG
>2.4|3865987|18|NZ_CP041169|CRT
CCTCTGCTTTTAAGCGAG
>2.5|3866041|24|NZ_CP041169|CRT
CCTCTGCCTTAGCGCGAGCTTCCG
>2.6|3866101|18|NZ_CP041169|CRT
CCTCTGCTTTTAAGCGAG
>2.7|3866155|18|NZ_CP041169|CRT
CCTCTGCCTTTAAGCGAG
>2.8|3866209|18|NZ_CP041169|CRT
CCTCCGCCTTAGCGCGAG

CRISPR arrays and Neighbor proteins around NZ_CP041169_2

CRISPR arrays

The CRISPR arrays of NZ_CP041169_2

>merge|NZ_CP041169|2|3865789-3866262|CRT
CTTCCGCTTCTTCTTGGGCTTTAGCCTTTGCTTCGGCTTCAGCTTTTAAGCGAGCCTCTTCTTCGGCTTGGGCTTTCGCCTGTGCTTCAGCCTTTGCCTTTAAGCGAGCTTCTTCTTCCGCTTGCGCTTTCGCCTGTGCTTCAGCCTCTGCCTTTAAGCGAGCTTCTTCTTCCGCTTGCGCTTTCGCCTGTGCTTCAGCCTCTGCTTTTAAGCGAGCTTCTTCTTCCGCTTGCGCTTTCGCCTGTGCTTCAGCCTCTGCCTTAGCGCGAGCTTCCGCTTCTTCTTCCGCTTGCGCTTTCGCCTGTGCTTCAGCCTCTGCTTTTAAGCGAGCTTCTTCTTCCGCTTGGGCTTTCGCCTGTGCTTCAGCCTCTGCCTTTAAGCGAGCCTCTTCTTCCGCTTGCGCTTTAGCTTGGGCGTCTGCCTCCGCCTTAGCGCGAGCCTCTTCTTCCGCTTGCGCTTTAGCTTGGGCGTCTG

>NZ_CP041169|2|2|3865789-3866262|CRT
CTTCCGCTTCTTCTTGGGCTTTAGCCTTTGCTTCGG	CTTCAGCTTTTAAGCGAG
CCTCTTCTTCGGCTTGGGCTTTCGCCTGTGCTTCAG	CCTTTGCCTTTAAGCGAG
CTTCTTCTTCCGCTTGCGCTTTCGCCTGTGCTTCAG	CCTCTGCCTTTAAGCGAG
CTTCTTCTTCCGCTTGCGCTTTCGCCTGTGCTTCAG	CCTCTGCTTTTAAGCGAG
CTTCTTCTTCCGCTTGCGCTTTCGCCTGTGCTTCAG	CCTCTGCCTTAGCGCGAGCTTCCG
CTTCTTCTTCCGCTTGCGCTTTCGCCTGTGCTTCAG	CCTCTGCTTTTAAGCGAG
CTTCTTCTTCCGCTTGGGCTTTCGCCTGTGCTTCAG	CCTCTGCCTTTAAGCGAG
CCTCTTCTTCCGCTTGCGCTTTAGCTTGGGCGTCTG	CCTCCGCCTTAGCGCGAG
CCTCTTCTTCCGCTTGCGCTTTAGCTTGGGCGTCTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041169.1|WP_014950983.1|3855909_3856152_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP041169.1|WP_141152866.1|3863064_3864045_-|cell-division-protein-FtsX	unknown	unknown	gnl|CDD|182910
NZ_CP041169.1|WP_012519864.1|3856333_3857311_+|prolyl-aminopeptidase	unknown	unknown	gnl|CDD|130316
NZ_CP041169.1|WP_012519853.1|3867812_3868415_-|YhgN-family-NAAT-transporter	unknown	unknown	gnl|CDD|170674
NZ_CP041169.1|WP_141152869.1|3870700_3871417_+|DNA/RNA-nuclease-SfsA	unknown	unknown	gnl|CDD|234733
NZ_CP041169.1|WP_071970054.1|3867233_3867812_-|YjaG-family-protein	unknown	unknown	gnl|CDD|377249
NZ_CP041169.1|WP_141152870.1|3872162_3873146_+|tRNA-glutamyl-Q(34)-synthetase-GluQRS	unknown	unknown	gnl|CDD|274810
NZ_CP041169.1|WP_141152864.1|3855274_3855913_-|DUF2959-family-protein	unknown	unknown	gnl|CDD|378580
NZ_CP041169.1|WP_012519846.1|3874556_3875054_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl|CDD|223872
NZ_CP041169.1|WP_012519849.1|3871637_3872087_+|RNA-polymerase-binding-protein-DksA	unknown	unknown	gnl|CDD|182722
NZ_CP041169.1|WP_071960097.1|3860434_3861661_+|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|225968
NZ_CP041169.1|WP_012519861.1|3858963_3859818_-|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl|CDD|235838
NZ_CP041169.1|WP_081365769.1|3866473_3867145_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl|CDD|236793
NZ_CP041169.1|WP_141152871.1|3873244_3874564_+|polynucleotide-adenylyltransferase-PcnB	unknown	unknown	gnl|CDD|236939
NZ_CP041169.1|WP_020746717.1|3857307_3857745_+|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl|CDD|235383
NZ_CP041169.1|WP_012519852.1|3868871_3869054_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP041169.1|WP_012519857.1|3864041_3864755_-|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl|CDD|225438
NZ_CP041169.1|WP_141152868.1|3869183_3870467_-|aminopeptidase-PepB	unknown	unknown	gnl|CDD|235330
NZ_CP041169.1|WP_141152865.1|3857950_3858865_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|370533
NZ_CP041169.1|WP_012519859.1|3861815_3863051_+|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|225968

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP041169.1|WP_141152866.1|3863064_3864045_-|cell-division-protein-FtsX	gnl|CDD|182910	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional.	6.57668e-69
NZ_CP041169.1|WP_012519864.1|3856333_3857311_+|prolyl-aminopeptidase	gnl|CDD|130316	TIGR01249, Putative_proline_iminopeptidase, proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.	1.41995e-106
NZ_CP041169.1|WP_012519853.1|3867812_3868415_-|YhgN-family-NAAT-transporter	gnl|CDD|170674	PRK10739, PRK10739, YhgN family NAAT transporter.	1.73292e-74
NZ_CP041169.1|WP_141152869.1|3870700_3871417_+|DNA/RNA-nuclease-SfsA	gnl|CDD|234733	PRK00347, PRK00347, DNA/RNA nuclease SfsA.	2.41405e-107
NZ_CP041169.1|WP_071970054.1|3867233_3867812_-|YjaG-family-protein	gnl|CDD|377249	pfam04222, DUF416, Protein of unknown function (DUF416). This is a bacterial protein family of unknown function. Proteins in this family adopt an alpha helical structure. Genome context analysis has suggested a high probability of a functional association with histidine kinases, which implicates proteins in this family to play a role in signalling (information from TOPSAN 2Q9R).	1.16713e-71
NZ_CP041169.1|WP_141152870.1|3872162_3873146_+|tRNA-glutamyl-Q(34)-synthetase-GluQRS	gnl|CDD|274810	TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA(Asp) synthetase. This protein resembles a shortened glutamyl-tRNA ligase, but its purpose is to modify tRNA(Asp) at a queuosine position in the anticodon rather than to charge a tRNA with its cognate amino acid. [Protein synthesis, tRNA and rRNA base modification].	4.18696e-129
NZ_CP041169.1|WP_141152864.1|3855274_3855913_-|DUF2959-family-protein	gnl|CDD|378580	pfam11172, DUF2959, Protein of unknown function (DUF2959). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.	5.79952e-106
NZ_CP041169.1|WP_012519846.1|3874556_3875054_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl|CDD|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	3.83558e-69
NZ_CP041169.1|WP_012519849.1|3871637_3872087_+|RNA-polymerase-binding-protein-DksA	gnl|CDD|182722	PRK10778, dksA, RNA polymerase-binding protein DksA.	1.87345e-72
NZ_CP041169.1|WP_071960097.1|3860434_3861661_+|EAL-domain-containing-protein	gnl|CDD|225968	COG3434, COG3434, Predicted signal transduction protein containing EAL and modified HD-GYP domains [Signal transduction mechanisms].	3.27378e-115
NZ_CP041169.1|WP_012519861.1|3858963_3859818_-|RNA-polymerase-sigma-factor-RpoH	gnl|CDD|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	0
NZ_CP041169.1|WP_081365769.1|3866473_3867145_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl|CDD|236793	PRK10909, rsmD, 16S rRNA m(2)G966-methyltransferase; Provisional.	3.49508e-73
NZ_CP041169.1|WP_141152871.1|3873244_3874564_+|polynucleotide-adenylyltransferase-PcnB	gnl|CDD|236939	PRK11623, pcnB, poly(A) polymerase I; Provisional.	0
NZ_CP041169.1|WP_020746717.1|3857307_3857745_+|D-tyrosyl-tRNA(Tyr)-deacylase	gnl|CDD|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	3.84144e-88
NZ_CP041169.1|WP_012519857.1|3864041_3864755_-|cell-division-ATP-binding-protein-FtsE	gnl|CDD|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	4.24112e-126
NZ_CP041169.1|WP_141152868.1|3869183_3870467_-|aminopeptidase-PepB	gnl|CDD|235330	PRK05015, PRK05015, aminopeptidase B; Provisional.	0
NZ_CP041169.1|WP_141152865.1|3857950_3858865_+|GNAT-family-N-acetyltransferase	gnl|CDD|370533	pfam09500, YiiD_C, Putative thioesterase (yiiD_Cterm). This entry consists of a broadly distributed uncharacterized domain often found as a standalone protein. The member from Shewanella oneidensis is described from crystallography work as a putative thioesterase because it belongs to the HotDog clan of enzymes. About half of the members of this family are fused to an Acetyltransf_1 domain pfam00583.	1.06439e-71
NZ_CP041169.1|WP_012519859.1|3861815_3863051_+|EAL-domain-containing-protein	gnl|CDD|225968	COG3434, COG3434, Predicted signal transduction protein containing EAL and modified HD-GYP domains [Signal transduction mechanisms].	2.80467e-95

Protein sequences

>NZ_CP041169.1|WP_012519857.1|3864041_3864755_-|cell-division-ATP-binding-protein-FtsE
MIKFEQVSKTYPGGQRALSKVNFHIAPGEMAFLTGHSGAGKSTLLKLISLMERPTVGRVLINGHDLNTITRRDIAYIRRDIGMIFQSHQLLMDKSVFDNVALPLVIEGYTHKEIRKRVEAALEMVGLRDKARCLPITLSGGEQQRVGIARAVVNKPPLLLADEPTGNLDPKLSMEIIRLFEDFNQAGVSVLIATHDLGLIARMRYRTLTLKNGQMITDGLTDDLSNESAGSAKGDWS
>NZ_CP041169.1|WP_141152866.1|3863064_3864045_-|cell-division-protein-FtsX
MSILFKGRAHGATAAKVGAVQSIVMFFVSHVRQALSSLGELWRQPVASLMTIGVLGLSITLPSTLYIMVKNTEKITAGWDQASEISLFLKPTINAASSQQLVARLNTWSEIDSVVYIPADDALKEFQHLSGLGDAIAYLEKNPLPDVVLVTPSLKHASPTAAQALLDKLRQQREVDIGKLDIEWLERLYAVIDIARDLVTLMGLLLFIAVVLIIGNTIRLNILNKYDEIVVMKLVGATDAFIHRPFLYTGFWYGLLGGLMAWFAVIIILWWMDSSITTFAAMYQKDFNITGLTGTALLAMLGLSVLLGLLGSLISVQRHVRDIEPK
>NZ_CP041169.1|WP_012519859.1|3861815_3863051_+|EAL-domain-containing-protein
MFAFIARQPILDKSKSVFAYELLFRDGKAGAYPEHNEEKAKYISEHFHPLGLDDISGEKTSFITFSSDTLISRFPTTLNPESVVVELADPTENTSGLFEACQHIKQLGFKLAIDDPMMVGATHDIFPLIDIVKVDVTKTRFETIEKHIPRYHDANVQLVAEQVDTQDNFSTCVDLGFDFFQGYFFSQPEARILRQLPASKMNIVDLMGESSNNNFNIERISHIIERDATLSFLLLKFINNPTINKRYKITSLKHALNYMGEVEIKKFIALLSLTNLGDDKPLEIIHMSLVRAKFFDLLAERRGIKNNPPISFLVGLFSLLEGLLDQSMTDILKQLPLSDEVNDALLGKNLELNSYMTLVRAFESALWMNVIKQAKVLNIDQKQLHMLYNQAIVWGNGVRSAISSHYPRATA
>NZ_CP041169.1|WP_071960097.1|3860434_3861661_+|EAL-domain-containing-protein
MFAYVARQPIFDVNREVYAYELLFRIGEDNCFPDIPPDEATSKILTSTHLSLGIEEITGDKKAFINFHRDTLMFRFPTSLDASKVVIEIVETVDVDDALVAACKHIRGLGYPIALDDYDMKGKWEAFIPFTSIVKIDITEIPHEKIPALVERFKANNIKLVAEKIETYEEYNTFKEMGFDYFQGYFLAKPEIVKHRKLGPSSLTMMELLTLSSQAKLDFDEVNKIIERDPSLTYLLLRFINNPMVNKRHKITSLKHALTFMGEVEVKKFISLLALANLSDGQPTELMQMALVRAKFCELVFTELKDSDNPLKGFLTGLLSLLDAMMEQRIDDLVSKVPISDDVKGALCGNPGMLRHCLTLAQFFERAKWAGIQQFATKYNIKQSLLHSYYNEAIKWAKHIHQSALNEK
>NZ_CP041169.1|WP_012519861.1|3858963_3859818_-|RNA-polymerase-sigma-factor-RpoH
MSNNLQSMALSVPHSGSIEGYIQAVSSIDMLSAEEERELAVRLREDEDLQAARKLVMSHLRFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEFVLKNWRIVKVATTKAQRKLFFNLRKAKKRLGWFTHDEVQTVANELGVSTKEVLQMEARMSSQDQAFDLSADEDETGNFAPVQFLEDKSSDVETDVINNDWDTAASKRLYSAIKTLDDRSQDIIETRWLADNKITLQDLADKYQVSAERVRQIEKNAMKKLQAAMVA
>NZ_CP041169.1|WP_141152865.1|3857950_3858865_+|GNAT-family-N-acetyltransferase
MYKVVTPKSDAEFEAYFHFRWEHLRQPWNFPPGSEKDEYEQVAEHRIITNRKGDIVACGRVHLNTAEEAQIRHIAVHSDHQRKGLGQMIMAALENVAKDLGAERAVTNSREISIDFFSSCGFEIEREAPNELGMLKRQQMVKKFTENNSLILHPKWCKSLQETWSETIPITEHMGIKLYQYTGRTLETRASLNKNINIHGTMFAGSIFSLATLTGWGMIYLQLKERGLDGDIVLGDGDIHYHKPITMKPRAICNIETLSGKFKPLENDSKARFELSVAILDGDTPVAEFEGVFYVLPPSKNEEE
>NZ_CP041169.1|WP_020746717.1|3857307_3857745_+|D-tyrosyl-tRNA(Tyr)-deacylase
MIGLIQRVSEANVTVAGEVIGEIGKGMLVLLGVEKEDGDAEIEKLANKLCRYRMFSDEDGKMNLNIEQVGGEILVVSQFTLVADTQKGNRPGFSRGATPEHGEAIYKKFVHALKAKGMAVSTGEFGADMQVGLVNDGPVTFHFNV
>NZ_CP041169.1|WP_012519864.1|3856333_3857311_+|prolyl-aminopeptidase
MKRLYPDVTCYENGFIEVGSGHSLYFEQSGNPNGIPVLFIHGGPGAGLPPNYKCFFDSNKYRIIGYEQRGCGRSTPIADTLNNDTWLNVEDIEALRTHLNIPKFLLFGGSWGSTLALLYALKYTAHVTGLILRGVFLARQEDRDWFLSPSGCAAQLFPEHYRRFTKDVPTPVTSSAVCDFYSAMVRSSNDVLRHAALKRWYQWEERLSRLSLPPGVGDSTSNYPMHLVTCLATLECHFLSNKCFLDENYILENIGKISHIPGTIIHGRYDMICKTEAAETLHKAWPQSQLQIIPDAGHSTSEPSIGYALCRATRDMSRFLQESSK
>NZ_CP041169.1|WP_014950983.1|3855909_3856152_-|hypothetical-protein
MAGQGSGGNVIAAICNFFIPGLGHLVQGRILGALFYFITVGVCYALAATVVLAIVFWPLGAILHLISIISAARFRGGVTA
>NZ_CP041169.1|WP_141152864.1|3855274_3855913_-|DUF2959-family-protein
MKLVASAFVAMLALSGCQSAYYAAWEKVGVEKRDILVDRVENAKESQEDAQEQFSSALEAFSAAVAFDGGELEEVYDRLNGQYEDSVAASEEVSARIDKVESVAEALFDEWSEELDKYENASLKRDSAAKLRETQRRYTSLMKAMRKAESKMPPVLNALQDNVLYLKHNLNASAIGALQGELSTIENNVAQLIGQMNSAIAESDAFIASLKN
>NZ_CP041169.1|WP_081365769.1|3866473_3867145_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MIPLSATMKRVSRPTRATSSAKKRHSSKNARAPSANSSGQIRIIGGQWRGRKLPVLNAEGLRPTTDRNKETLFNWLMPYVNNARCLDVFAGSGGLGLEALSRYASHCDFIELDKQAATQLKSNLTLVNASNTAATGVHQGDALNILRGISDAPYDIIFVDPPFAKGLVAPTLAAIVDNNLVQSGSVIYLEHESALVTPSLPAHWNIIKDKQTSALRYMLIEVN
>NZ_CP041169.1|WP_071970054.1|3867233_3867812_-|YjaG-family-protein
MAKQKLNTFGRVRALEGWKAVAFGAALLERMLPNYTLFCDLTESGDASALRNCLNLVWETLKSPKSKFNIAVQLEKVEVATPDTSEFDNYGVYPAIDAAIGLAGLLNLMAGDDPQGAVVISKLSQGSVEAYLLATEEADDESVKVHPLMEFEVEVQNELLDYVEQAKYPAKAADEIKALALEAGISNIGLEL
>NZ_CP041169.1|WP_012519853.1|3867812_3868415_-|YhgN-family-NAAT-transporter
MDTWSAAIMLFLIMDPLGNLPVFMSVLKSIEPKRRQFILIRELLFALGILFLFLFSGQSVLNFLNVEQETVSIAGGIILFLIALKMIFPSTGNPSGLAVGEEPFLVPLAIPMIAGPSTLAALILLANQAPDRMVDWSIALAASWSISAVILLFSNVFHKILGERGLVAMERLMGMILVMIAIQMLLDGVTSYFMHATGAL
>NZ_CP041169.1|WP_012519852.1|3868871_3869054_+|hypothetical-protein
MSLMTVKEVAAYLGVQEVRVERLERESLLVSKDKDTDGNPLFDSGDVERYKQLAERLGGI
>NZ_CP041169.1|WP_141152868.1|3869183_3870467_-|aminopeptidase-PepB
MAEFTVSLSKNSAEAVWGESAKLSFNESGAVIHLPDDKLNERLIQQAARKLDGLGLPAVSLSGDWHKEQQWAFALSFTRARKPASINWAETQDKAALEQEYAALLFTRQLVNDTPEDLSPVTLATRAAQWLKSLGGDKVSYSMTVGEELKEQGWIGIYNVGRGSERPPAMLVLDYNPTGNAEAPIDAVLVGKGITFDSGGYSIKSSEGMLDMKCDMGGAATVTGALGLAITQGSEKRIQLILCCAENLISGHAYKLGDVLTYKNGVTVEVVNTDAEGRLVLADGLMAATETGAPLIIDAATLTGAAVVALGSDYHGVFSLDDNAREQMLKAAKKENERFWPLPLEDFHAERCPSAFADTANSRPMKGGGGGGASNAAGFLSRFVKPEGWVHLDLAAAYHGGATSEMPVGATAKGIRSIARMLNNYTA
>NZ_CP041169.1|WP_141152869.1|3870700_3871417_+|DNA/RNA-nuclease-SfsA
MKFSPSLLRGTLIKRYKRFFADVELEDGTIVTAHCPNTGAMSGCAEPGYPVFLSESTNPKRKLKYTWELAQTFDGHFIGINTHNANKLVAEALDNKVLKEFSDITRWKAEVTPPTANSRFDFALERENAQHQGIIEYMEVKSVTLAENSKGFFPDAVTQRGAKHCLELARLAESGIKTSLLFCVQHTAIESVQVAEYIDPTYAESVKKAADAGVSLLAASCIIDEQKILLNQTLPLIL
>NZ_CP041169.1|WP_012519849.1|3871637_3872087_+|RNA-polymerase-binding-protein-DksA
MPTGKETKSLGLLALAGLQPYEPKADEEYMGEPQLEHFRLLLKAWRNQLREEVDRTVTHMKDEAANFPDPVDRAAQEEEFSLELRTRDRERKLIKKIEKTLKRIEEDDFGFCDSCGIEIGIRRLEARPTADLCIDCKTMAEIKEKQLQG
>NZ_CP041169.1|WP_141152870.1|3872162_3873146_+|tRNA-glutamyl-Q(34)-synthetase-GluQRS
MHNRYVGRFAPSPSGQLHFGSLVTAVASYLDAKSHNGKWLVRMEDIDEPRCIAGVDKDILRTLEAHGLLWDDEVLYQSQQHARYQIVLDELIAKERAYYCTCTRKQIKAMGGVYNGHCRNKHVGSSLLPLNDDSAVRLKLDVPLDAFIDVIMGEVKPHAGLSLNHQQTNTSEGGPFADALHAEDVVLKRRDGLFSYNLVVVLDDVFQQVNHVIRGCDLIDVTPLQRAVYQSLGFTSPEYGHIPVAAVAPGRKLSKQNRAAPVNNSIPIDNIVRVMHFLGFSFPDAATFNNVESVLNEAISMWSRKKVVKTAEIIVPQHESTYYNEPL
>NZ_CP041169.1|WP_141152871.1|3873244_3874564_+|polynucleotide-adenylyltransferase-PcnB
MTRGEHGISREDISANALKVMYRLNGAGFESYLVGGCVRDILMGHEPKDFDVATNATPEQIKGLFKNCRLIGRRFRLAHIVFGREIIEVATFRGHHQESDEDENVPKAKVVAKRDSHGQLVRDNVFGSIEEDAERRDFTFNAMYYSVADFTVTDFANGLAAIEKREVELIGDPETRYREDPVRMLRAVRFAVKLGMRIEEKTAEPIKPLANLLQNIPPARLFEETLKLFLSGKGEETFLMLHEYGLIEPLFPQLAPFLKDENSREMQFVRRVLANTDERINSNQRVTPAFLYAALLWYPVEEQSQRLQSESGLNAHDAFNIASGEVISRQIQRIMIPKRFSTVVRDIWILQQRLPKRFGRRAFQLLTHPKFRAGYDFLLVRGQVEGGDLLELAQWWTHFQHADNGKQKGMLNALRKSEGGGKGGPRKRKRKPAKRGPDA
>NZ_CP041169.1|WP_012519846.1|3874556_3875054_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MHKEHVYIGVGSNLGDSEGKAQKAFDAMGKLEDTRVLKTSSLYSSKPMGPQDQPDYINAVCLIETALKPHGLLKQLQRIELEEGRERKGERWGPRTLDLDILLYGSENIDTADLIIPHYGMAEREFVMVPLFEIAPNMVMHDGKPISAWVANCSLDGLRRLRSSN

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP041169_1	1.6|2581243|18|NZ_CP041169|CRT	2581243-2581260	18	NZ_CP041169.1	1344573-1344590	1	0.944
NZ_CP041169_2	2.5|3866041|24|NZ_CP041169|CRT	3866041-3866064	24	NZ_CP041169.1	3865771-3865794	1	0.958
NZ_CP041169_2	2.8|3866209|18|NZ_CP041169|CRT	3866209-3866226	18	NZ_CP041169.1	3865771-3865788	1	0.944
NZ_CP041169_2	2.5|3866041|24|NZ_CP041169|CRT	3866041-3866064	24	NZ_CP041169.1	3866263-3866286	2	0.917

1. spacer 1.6|2581243|18|NZ_CP041169|CRT matches to position: 1344573-1344590, mismatch: 1, identity: 0.944

ttcgagcgcaggctctaa	CRISPR spacer
ttggagcgcaggctctaa	Protospacer
** ***************

2. spacer 2.5|3866041|24|NZ_CP041169|CRT matches to position: 3865771-3865794, mismatch: 1, identity: 0.958

cctctgccttagcgcgagcttccg	CRISPR spacer
cctcggccttagcgcgagcttccg	Protospacer
**** *******************

3. spacer 2.8|3866209|18|NZ_CP041169|CRT matches to position: 3865771-3865788, mismatch: 1, identity: 0.944

cctccgccttagcgcgag	CRISPR spacer
cctcggccttagcgcgag	Protospacer
**** *************

4. spacer 2.5|3866041|24|NZ_CP041169|CRT matches to position: 3866263-3866286, mismatch: 2, identity: 0.917

cctctgccttagcgcgagcttccg	CRISPR spacer
cctcagctttagcgcgagcttccg	Protospacer
**** **.****************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	850239 : 858905	6	Streptococcus_phage(16.67%)	NA	NA
DBSCAN-SWA_2	3728938 : 3736512	6	Enterobacteria_phage(66.67%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP041169|850239:858905|DBSCAN-SWA
CTTATTGACCTTTGATTTCACTAATACCTTTATAGGTTGCTGCGTCACCTAGTGCTTCCTCAATGCGAAGAAGTTGGTTGTACTTAGCAACACGGTCAGAACGACATAGTGAACCCGTCTTGATTTGGCCAGCCGCTGTACCTACTGCAAGGTCAGCAATGGTGGCGTCTTCTGTTTCACCAGAACGGTGAGAGATAACCGCTGTAAAGCCAGCGTCTTTCGCCATTTTAATTGCGTTAAGGGTTTCAGTTAGTGAACCGATTTGGTTGAACTTGATAAGGATTGAGTTGCCAATGCCGTTATCAATACCGCGCTTAAGGATTTTGGTGTTAGTTACAAACAAGTCGTCGCCAACTAGCTGTACTTTGTCACCAATCTTCTTAGTTAGGCTTGCCCAGCCGTCCCAGTCGCTTTCGTCTAGGCCGTCTTCAATAGATACAATTGGGTACTGTGCAGAAAGGTCAGCAAGGTAGTCGCCAAACGCTTCTGAATCGAAGCTCTTGTCTTCGCCAGATAGAACGTATTTGCCTTCTTTGTAGAATTCAGACGCCGCACAGTCTAGTGCAAGTGTGATGTCTTCATTCATTTTATAGCCAGCGTTTTCAACGGCTTCAACGATAACAGCAAGTGCTTCAGCGTTTGAGCTAAGGTTAGGGGCAAAACCACCTTCGTCACCAACCGCTGTGTTTAGACCTTTGGCAGAAAGTACTTTCTTAAGTGCGTGGAAAATTTCCGCGCCCATACGTAGTGCTTCTTTAAAGCTCTTCGCGCCTACTGGCTGAACCATGAACTCTTGAATGTCTACGTTGTTGTCAGCGTGCTCACCACCGTTGATGATGTTCATCATAGGAACAGGCATTGAGTACTGACCAGATGTGCCGTTTAGGTCTGCAATGTGCTCGTAAAGTGCTACGTCTTTTTCAGCCGCTGCCGCTTTTGCTACAGCAAGAGAAACCGCAAGGATCGCGTTCGCGCCCAGTGTTTCTTTGTTTTCTGTGCCATCAAGGTCAATCATGATGCCGTCGATATCAGCTTGTGCTAGTGCGTCTTTGCCTAGTAATGCTGGTGCAATGGTATCGTTAATCGCTGCAACGGCTTTTGTTACGCCTTTACCTAGGTAACGAGACTTGTCGCCGTCGCGTAGTTCTAGTGCTTCGCGGCTACCAGTAGAGGCACCTGATGGTGCAGCAGCACGGCCCATTGCGCCTGATTCTAAGTATACATCTGCTTCTACAGTAGGATTTCCGCGTGAATCTAAGATTTCGCGTCCGATAATGCGACTAATTTTCGCCATGTTTTTTCCTCAACAATGTAATGGGGCGCAACGGGAGAGAGCGCCCCTTTTATTAGAAATTAGTGATTTTCTTTCTGGTACTTTCCTGCCGCAGCAACGAAACCAGTAAATAAAGGGTGTCCATCCCGAGGCGTTGATGTGAACTCAGGGTGGAATTGGCCCGCAATGAACCAAGGATGATCAGGGATTTCCACTACTTCTACAAGTCGCTTGTCAGTGGACAAACCACTTACTTTCAATCCTGCTGCTTCAATTTGATCGCGAAGATTATTGTTCACTTCGTAACGGTGACGGTGGCGCTCGTAGATCTCAGCGTTGCCGTACATCTCGTGTACTTTTGTCCCTTCAATAAGGTGGCAAAGCTGGCTACCTAAACGCATTGTACCGCCAAGGTCTGATGTTTCAGTGCGCACTTCGGTCGTACCCGCAGCGTCCAACCACTCGGTAATAAGGCCAACAACTGGGTAAGGTGTTTCAGGGTCGAACTCTGTGCTGTTCGCTTTTTCCATGCCGGCAACGTTACGTGCGTATTCGATAAGCGCGACTTGCATTCCTAAACAAATGCCTAAGTAAGGCACCTTGTTTTCGCGCGCATAGCGGGCTGCCGCAATTTTACCTTCAATACCGCGCTCACCAAAGCCGCCAGGCACTAAGATAGCGTCTAACTGCTCTAAAATTTGTGTGCCTTTGCTTTCCACATCCTGTGAGTCGATGTGATGAATGTTCACGGTCAGTCGATTTTTAAGACCTGCGTGCTTAAGCGCTTCATTAACTGACTTATAGGCATCAGGCAATTCAACGTATTTGCCTATCATACCGATGTTTACTTCAGCCGTCGGGTTAGACTCTGCGTAAAGTACTTGTTCCCATTCAGATAGGTCTGCTTCGTTGCACTCTAAACCAAAGCGGTCTACAACCAGCTGGTCCATACCTTGCGCTTTAAGTGCAGCAGGAATACGGTAAATGCTGTCTACGTCTTTAAGTGAAATAACCGCTTTATCAGCAACGTTGGTGAACAGCGCGATTTTAGAACGTTCGCTAGCTGGTAATGCACCAACTGAACGGCACACAAGAATGTCTGGCTGAATACCAATAGAGCGAAGCTCTTTTACTGAGTGCTGCGTTGGCTTGGTTTTAACTTCGCCCGATGCAGGCATGTAAGGCACAAGTGTTAAGTGCATGAACATAGCGCGTTCACGGCCCACTTCAGTACCAAGCTGACGAATAGCTTCTAAGAAAGGTTGTGACTCGATGTCACCTACGGTTCCGCCCACTTCAACAATAGCCACATCATGACCTTCAGCACCTTCGATAACGCGGCGCTTAATTTCATTGGTAATGTGAGGGATAACCTGAATGGTTGCACCTAAGTAATCACCGCGACGCTCACGCTTCAGTACTTCTTCATATACCCGGCCGGTTGTGAAGTTGTTGCGCTTGGTCATACGGGTGCGAATAAAACGCTCATAGTGACCAAGGTCAAGGTCGGTCTCTGCGCCGTCATCGGTAACAAATACTTCACCATGCTGGATGGGGCTCATTGTGCCCGGGTCGACATTGATGTAAGGGTCGAGTTTTAACATGGTTACGGTGAGACCGCGAGCTTCCAGAATTGCGGCTAATGATGCTGCAGCAATACCTTTACCTAGCGATGAAACTACACCACCTGTGACGAAAATATAATTTGTCATGCGAAACCTAGAACGTTTGGGTTGTATGGTAAATATAGGCTGAGTTTAGAACAAAACCAGCTACACTTTGGACGGGGCGATAGTATACGCAAATTCATGTGGGCAGACAATCAATTTGCCCACATGATGCGCAATTTTACGATTGACTTAAGCGTTTAAGGGTGTAGATGAGGTCGAGCGCTTGGCGAGGAGATAGCTCATCGGGCGATAAGTTTTCAAGCGCTTCCACCACGGGGTGCGGTTTGTCTGGAAAAAGCATTTCTGCTTGTCCTTTCGCATTTGAACTGTTGTCAATTTTTCTGGAGGTGTCGCTTTGCGCTTGCGAAGTGTCACTGCCCCTTGATTCATCACTGGTCATGACGTGCGATGATTCTAAAATAGCGAGCTTTTGCTGGGCGGCTTTAATCACAGGTTTTGGTACACCAGCAAGTTGTGCAACTTGTAAACCAAAGCTCTTGTTCGCGGCGCCTTCAGATACGGTATGCATAAAGCGAATGGTGTCTTCAAACTCCATCGCATTAAGATGCACGTTCACAACGCCCGCTTGCGTTTCGGGTAGCTCGGTCAGCTCAAAATAGTGGGTCGCAAAAAGGGTGTAGGCATTTAGCTGCTTCGCCAAGTAGCTCGCGCAGGCCCATGCCAGCGATAAACCATCATAGGTGCTGGTACCACGGCCAATTTCATCCATTAACACCAGTGAGTTTTCAGTCGCGTTATTAAGAATATTTGCCGTTTCGGTCATTTCAACCATGAAGGTTGAGCGGCCAGAGGCCAGGTCATCTGATGCGCCAATCCGGGTGAATATGCGATCCAGCTTGCCGATGTGGGCGTTTTCAGCAGGCACATAACTGCCGATGCAGGCCAATAAAGCAATAAGCGCTGTTTGACGCATGTAGGTCGATTTACCGCCCATGTTTGGGCCGGTAATAACGAGCATACGGCGCTCAGTATCCAGTTGCAGTGGGTTGGCAATGAAGGGGTCTTTCATTACGTTCTCAACCACAGGGTGGCGACCGGCATCATAAGTAAGCGTACATTCTTGGCTCAATTTTGGCCGATGCCAATCGAGCGATACCGCGCGTTCGGCAAAACAGCACAGCACGTCGAGCTTGGCAAGCGCAGCGGCGGTTTCAATTAACTTGTTGAGGTATGGCGCAAAATTGTCGAACAAGGCTTCATAAAGCTGTTTTTCAAGGGCAAGTGCAGCCCCTTGGCTACTTAGCACTTTGTCTTCGTGCTCTTTAAGCTCAGGCGTAATGTAACGTTCGGTGTTCTTAAGGGTCTGTCTTCGGATGTATTCGGCGGGGGCCAAAGCGCTGTTAGCACGACTAATTTCAATAAAAAAACCGTGCACTTTGTTATAGCCCACTTTCAATGTGGAAATGCCTGTGCGTTCACGCTCACGTTGCTCCATCGCATCTAAGTAGTCGGTAGCACCTTGTGATAGCTTGCGCAGTTCATCCAGTTCAGCATTATAGCCTTCGGCAATTACGCCACCATCGCGTATAACAACTGGTGGATTATCGATTATAGCGCTGTTTAACAGGGCTTGAAGCTCAGGGTAAGTGCCAATGGTTTCGCCAATACTTCTAATTTGTCCTGTGTCAAAACGGGCAAGAGCATCTTGTAAATCAGGCAGTGCATTAAACGCATTTTTTAAACGTGCAAAATCCCGAGGGCGCGCCGAGCGAAGGGCTAAACGCGCCATAATACGCTCTATGTCGCCAATGTGTTTTAGCGCACTGCGGATATCTTCAGGATCGTCATTAATAAAGGTGTCTATTGCGTCTAAGCGGCTTTGGAGCTCATGCTGGTCGGTCAGCGGCGAGTGAATGATTCGCTGTAACATACGACTGCCCATGGCCGTGGTGGTAGTGTCCATTACGCTGAACAGGGTATTTTCCTGACCGCCAGACAAATTATGGGTAAGTTCCAGGTTTCTGCGCGTTGCGGCATCAAGCTGAACACGGCTGTCTTGCTGTTCAGTCTGAATGCGGCGAATGTGGGGCAGGGCAGTGCGCTGGGTATCTTTTACATATTGTAAAACACAACCTGCTGCGCCTAAGCCTTTAGTGACGCCTTTTATACCAAAGCCATCTAAGGTTTTGGTTTCAAACTGGGCGTTAAGCTGTTCATTTGCAGTATCTACGTCGAATTCCCACTCGGGACGCCTGCGTAGCCCTTTGCGATTTTCAACAAGAGACAGGCTTTCAAAGCCTTCAGGGTAAAGTAACTCAGCCGGGTTAATGCGCTGAATTTCAGCCAGTAAGCTTTCATCACTATCGCACTCGAACACCACAAAGCGACCGCTAGTTACATCTAATGTGGCTAACCCATAATGCATGCTATGGCCGCACACAGCGGCAAGAATATTGTCGCGACGCTCTTCTAATAAAGCTTCGTCGGTTACAGTGCCTGGCGTAACAATGCGCTGAACGGCACGCTCAACGGGGCCTTTGCTCGTCGCTGGGTCGCCAACTTGTTCACAAATGGCGACCGACTCCCCCATTTTCACTAAACGCGATAGGTAGCTTTCTACCGCATGATAAGGCACGCCTGCCATGGGAATGGGCTCGCCACCCGATTTACCTCGCGCCGTAAGCGAAATATCCAGTAATTCAGCAGCTTTTTTGGCATCGTCATAAAATAACTCGTAAAAATCGCCCATGCGATAAAAAAGTAGAATATTCGGATGTTGCGCCTTTATGCTTAAATATTGGCGCATCATAGGAGTATGTGATTCCAAAAAAATGCCTCTGCGAATTTGTTGCTGGGTTTAATGCCTGTTGAAGGGAATAAATGATAAACTCACCCTCTTTAAGATCAAGCGCAGATCTTATGAATAACAGATCTGGTGAATAACAACAGGTGTAACTAGGTATCTCTAAAATGAACGGGACATTTTCAACTGATTCGACAGTAAACGCCACCCCTTTAAGGCTTGATAGTGCATTATCTGCTCAAATTCAGGTATTGGGCGATGCACTTCGAGCAAAAGGTTGGAGTGTGTCTAGCGCAGAGTCCTGTACGGGCGGAGGTATAGCCTTTGCTTTTACCAGTGTATCGGGCAGCTCGGATTGGTTTAATCAATCATGGGTAACCTACTCAAACAGTGCTAAACAAAGCCGCTTGGGCGTTACCGAGCAAACGCTAGTAGAGTATGGCGCCGTATCTCAGCAAACGGTAAAAGAAATGGCGGACGGAGTACGCCGCAATAGTGGTGCGCAACTCGTTGTTACCGTAAGCGGGATTGCTGGCCCAAATGGTGGCAGTGAAGAAAAGCCGGTGGGTACTGTATGGTTCGGTTTTTTATGTGGCGAAAAAGCGGAACAAATTAAACAAGTATTTAGCGGTGACAGAGATGAAGTTCGCCATCACGCGATCGCTTTTGCTATTTCTCACTTAGTAAAATTGTTGAGTGAAAATTAAAAACACGGGTTGAAACTGTATGCTTGTACAGTATAGAATGTGATCATTATTTGATACCGTCATTAAATGAATAGGCGATGTCAAAACAGAATTTAACCGCAAATCCTAGAGGATACATACGTGGACGATAACAAATCAAAAGCTTTAACCGCCGCAGTAGGCCAAATTGAAAAGCAATTTGGTAAAGGCGCAATCATGCGCTTAGGCGACAACCAAGCCATGGATATTGAAGCGATTTCTACTGGCTCACTAACCATTGATATCGCTCTAGGCATAGGCGGTTTACCGTGTGGTCGTGTTGTAGAAATTTACGGTCCTGAATCATCAGGTAAAACCACGCTAACACTCCAAGTTATCGCTGAAGCGCAGAAAAATGGTAAAACCTGTGCGTTCGTTGACGCTGAACACGCCCTAGACCCTGTATACGCCGAAAAGTTAGGCGTAAACATTGACGAGCTATTGGTATCCCAGCCTGACACTGGTGAGCAAGCGCTAGAAATTTGCGACATGTTGGTTCGCTCTGGTGCCGTAGATGTCGTTATTGTTGACTCGGTTGCTGCACTTACACCAAAAGCCGAAATTGAAGGTGACATGGGTGATTCTCACGTTGGTCTTCAGGCCCGCTTGATGTCACAGGCGCTGCGTAAGCTTACGGCAAACATTAAGCGTTCAAACACCCTTTGTATCTTCATTAACCAAATTCGTATGAAGATTGGTGTAATGTTTGGTAACCCAGAAACGACAACGGGTGGTAACGCGCTTAAGTTCTACTCTTCTGTTCGTCTAGACATTCGCCGTATTGGTGCAGTTAAAGAAGGCGATGAGGTAGTGGGTAACGAAACCCGCGTGAAGGTAGTGAAAAATAAGGTTGCGCCACCGTTCAAGCAAGCTGAATTTATGATCCGCTACGGTGAAGGTATCAGCAAAGAAGCAGAGCTTATTGACCTAGGTGTTAAGCAGAAGCTTGTTGATAAAGCCGGCGCTTGGTACAGCTATAAGGGTGACCGTATTGGTCAAGGTAAAGCAAACGTAATGAAGTACCTTAAAGAACACCCAGAGACAGCAAACGAGATCGAAACGAAGATCCGCCAAGAACTATTGCTTTCTAAAACAGTAAAGGCAGAAGAAGCATTGCCGCAGGGTGAAGACGACGTACTTCCTGAGTAAAATTAACGCTTCATAGCGATTAAAAACCCACCCTTTGGTGGGTTTTTTTGTATCTGCATTTTATACCTTCGACAATACATATTTATTAACACTTCTTGGTAACCTAGAACTTGTACAAAAAAGAAAAACAGGGAATGCTGTAATAAATATTTAGTTGTTCAGACTACTAAGAGTAAATAAGGCAAGCCTTGCGAGTAAATTAGGGCAAGCCTATAACAATAATGAACAGTATTAACTGTTTACAAGAGAGAAGAGGGAAAGGGAATGATTGAAATATCAGGTCTCGCCAAACGCTTTACGGTGGAAAACCCGAAAAAGCTTAGCGAACAAGAGAAGAAGGACCCGCGTTTAAAAGGGCGTTATTTTCAGTCAGTAAGGGATGTGTCTTTTACTTGCGAAAAAGGTCAGGTTCTTGGACTGTTAGGACCTAACGGCGCAGGTAAAACCACTACATTGCGTATGCTTTCAACAGCGCTTAAACCCGACAGTGGCAAAGTACTCATAGGTGGCGAGGACGTACTTTCTAACCCCAACATTGCGCGAAAGAAAATTGGTTTTCTTTCGAGTTCAACAGGTCTATATGGCCGTTTAAGCGGGCGTGAAAATATTAGCTACTTCGGTGAGCTACACGGCATTTCAAAAAATGTGATTAATGCACGTATTGAAGAGTTAGCTGACTTGCTCGATATGCAAACCTTCCTTGATAGAAGAGCGGAGAATTTTTCATCAGGCATGAAACAAAAAGTGTCGATTGCCCGCGCTGTTATTCACGAGCCAGAACTGGTGGTTCTCGATGAGCCCACCACGGGTCTTGATATTATGGCAACCAGTACCGTTATGGAATTTATCCAACGCCTTAAGGATAAAGGTACCCCGGTTATTTTCTCTACTCACCATCTTGATGAGGTGCAAACCCTTTGCGACAAGGTGACCGTGATTAACCAAGGAGAAACCGTATTTAACGATTCGCTTGCCGCTTTTAGTGCTTTGTCTGGCAATGAAGGGGCCAGCGGTCAGATGCACAAGAGCTTTCTAAAAACACTATCAATGGATACTGAGGAGACGGGCAATGTGGTTAATCTTTAA

Protein sequences of DBSCAN-SWA_1

>NZ_CP041169|850239:858905|851591_853223_-|WP_012517444.1|DBSCAN-SWA
MTNYIFVTGGVVSSLGKGIAAASLAAILEARGLTVTMLKLDPYINVDPGTMSPIQHGEVFVTDDGAETDLDLGHYERFIRTRMTKRNNFTTGRVYEEVLKRERRGDYLGATIQVIPHITNEIKRRVIEGAEGHDVAIVEVGGTVGDIESQPFLEAIRQLGTEVGRERAMFMHLTLVPYMPASGEVKTKPTQHSVKELRSIGIQPDILVCRSVGALPASERSKIALFTNVADKAVISLKDVDSIYRIPAALKAQGMDQLVVDRFGLECNEADLSEWEQVLYAESNPTAEVNIGMIGKYVELPDAYKSVNEALKHAGLKNRLTVNIHHIDSQDVESKGTQILEQLDAILVPGGFGERGIEGKIAAARYARENKVPYLGICLGMQVALIEYARNVAGMEKANSTEFDPETPYPVVGLITEWLDAAGTTEVRTETSDLGGTMRLGSQLCHLIEGTKVHEMYGNAEIYERHRHRYEVNNNLRDQIEAAGLKVSGLSTDKRLVEVVEIPDHPWFIAGQFHPEFTSTPRDGHPLFTGFVAAAGKYQKENH
>NZ_CP041169|850239:858905|850239_851532_-|WP_071968328.1|DBSCAN-SWA
MAKISRIIGREILDSRGNPTVEADVYLESGAMGRAAAPSGASTGSREALELRDGDKSRYLGKGVTKAVAAINDTIAPALLGKDALAQADIDGIMIDLDGTENKETLGANAILAVSLAVAKAAAAEKDVALYEHIADLNGTSGQYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKSFKEALRMGAEIFHALKKVLSAKGLNTAVGDEGGFAPNLSSNAEALAVIVEAVENAGYKMNEDITLALDCAASEFYKEGKYVLSGEDKSFDSEAFGDYLADLSAQYPIVSIEDGLDESDWDGWASLTKKIGDKVQLVGDDLFVTNTKILKRGIDNGIGNSILIKFNQIGSLTETLNAIKMAKDAGFTAVISHRSGETEDATIADLAVGTAAGQIKTGSLCRSDRVAKYNQLLRIEEALGDAATYKGISEIKGQ
>NZ_CP041169|850239:858905|853359_855951_-|WP_141153070.1|DBSCAN-SWA
MMRQYLSIKAQHPNILLFYRMGDFYELFYDDAKKAAELLDISLTARGKSGGEPIPMAGVPYHAVESYLSRLVKMGESVAICEQVGDPATSKGPVERAVQRIVTPGTVTDEALLEERRDNILAAVCGHSMHYGLATLDVTSGRFVVFECDSDESLLAEIQRINPAELLYPEGFESLSLVENRKGLRRRPEWEFDVDTANEQLNAQFETKTLDGFGIKGVTKGLGAAGCVLQYVKDTQRTALPHIRRIQTEQQDSRVQLDAATRRNLELTHNLSGGQENTLFSVMDTTTTAMGSRMLQRIIHSPLTDQHELQSRLDAIDTFINDDPEDIRSALKHIGDIERIMARLALRSARPRDFARLKNAFNALPDLQDALARFDTGQIRSIGETIGTYPELQALLNSAIIDNPPVVIRDGGVIAEGYNAELDELRKLSQGATDYLDAMEQRERERTGISTLKVGYNKVHGFFIEISRANSALAPAEYIRRQTLKNTERYITPELKEHEDKVLSSQGAALALEKQLYEALFDNFAPYLNKLIETAAALAKLDVLCCFAERAVSLDWHRPKLSQECTLTYDAGRHPVVENVMKDPFIANPLQLDTERRMLVITGPNMGGKSTYMRQTALIALLACIGSYVPAENAHIGKLDRIFTRIGASDDLASGRSTFMVEMTETANILNNATENSLVLMDEIGRGTSTYDGLSLAWACASYLAKQLNAYTLFATHYFELTELPETQAGVVNVHLNAMEFEDTIRFMHTVSEGAANKSFGLQVAQLAGVPKPVIKAAQQKLAILESSHVMTSDESRGSDTSQAQSDTSRKIDNSSNAKGQAEMLFPDKPHPVVEALENLSPDELSPRQALDLIYTLKRLSQS
>NZ_CP041169|850239:858905|856112_856652_+|WP_012517446.1|DBSCAN-SWA
MNGTFSTDSTVNATPLRLDSALSAQIQVLGDALRAKGWSVSSAESCTGGGIAFAFTSVSGSSDWFNQSWVTYSNSAKQSRLGVTEQTLVEYGAVSQQTVKEMADGVRRNSGAQLVVTVSGIAGPNGGSEEKPVGTVWFGFLCGEKAEQIKQVFSGDRDEVRHHAIAFAISHLVKLLSEN
>NZ_CP041169|850239:858905|856772_857819_+|WP_012517447.1|DBSCAN-SWA
MDDNKSKALTAAVGQIEKQFGKGAIMRLGDNQAMDIEAISTGSLTIDIALGIGGLPCGRVVEIYGPESSGKTTLTLQVIAEAQKNGKTCAFVDAEHALDPVYAEKLGVNIDELLVSQPDTGEQALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGDMGDSHVGLQARLMSQALRKLTANIKRSNTLCIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAVKEGDEVVGNETRVKVVKNKVAPPFKQAEFMIRYGEGISKEAELIDLGVKQKLVDKAGAWYSYKGDRIGQGKANVMKYLKEHPETANEIETKIRQELLLSKTVKAEEALPQGEDDVLPE
>NZ_CP041169|850239:858905|858083_858905_+|WP_012517448.1|DBSCAN-SWA
MIEISGLAKRFTVENPKKLSEQEKKDPRLKGRYFQSVRDVSFTCEKGQVLGLLGPNGAGKTTTLRMLSTALKPDSGKVLIGGEDVLSNPNIARKKIGFLSSSTGLYGRLSGRENISYFGELHGISKNVINARIEELADLLDMQTFLDRRAENFSSGMKQKVSIARAVIHEPELVVLDEPTTGLDIMATSTVMEFIQRLKDKGTPVIFSTHHLDEVQTLCDKVTVINQGETVFNDSLAAFSALSGNEGASGQMHKSFLKTLSMDTEETGNVVNL

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071968328.1|850239_851532_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	2.2e-135	59.7
WP_012517444.1|851591_853223_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	3.2e-147	50.2
WP_141153070.1|853359_855951_-	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	2.9e-33	21.8
WP_012517446.1|856112_856652_+	CinA family protein	B5TK85	Pseudomonas_phage	1.0e-25	45.2
WP_012517447.1|856772_857819_+	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	2.5e-116	62.8
WP_012517448.1|858083_858905_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.4e-26	33.2

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP041169|3728938:3736512|DBSCAN-SWA
ACTATCGCGTTATCAATTCTGAAGAAAACGACAGCGAGATGTCCGGCGCGTTTAAGCTACCTACATCTGTGTTTTCCCAAAATTCTGGGTATTGTTCTTCCAAGTTTAGTTTAAAGGTGAAACTCAAACGAGGAAGAATATTAAACACAAAATCTTCGTTAAAATCATCTGTGTAATCAACTTTGTTAGACTGCATTTCAAGTGTAGCAACAACATCTTCTTGCTTTGATCCCAATAATTTCCAAGTATATTCTCTGTTGAAAACAAACGCGCTATTCTCGCGTAACCCAACGATGTTGACCTCGTTATCATCCACAGTCCACTGGAAGTTATGAAGTTCACCATCTCCTACAAAGTATGGTTCTTCAAAGGCAGAATAGACTCTACCTGCGCTGCCGTCAGGTTCAAAGTAATAGCCAAATACGTCGTCGAATAATGGAACACCATCTACGAAAAATGCTTCATTATAGGAAAACATCCAAATGTTGGGTAATGAACTCTCTATGCTGAAGTCTTCGGCCAATTCATAATTTATGGCGTGCATATCACCGGTATACTTGATAACTTCACCATCATTATCAAATTCATAAAGCGCGAGCACGAAATCATTCTGCGCCTTAAATGGTGTAACTGTAAATGACATACCTTCCAATTCAATGTCGATAACACCATTATTTAGCTGCCACGTTCCTTGTGCATCATAAACAAGAGACGTAAAGGTATTATCATCTTTGAATGTAAACTGGTCGTTTAAAATACCAACTTCAGTACGCTCGTCTTCATTTAAGTACTCTTTATCAAACGTGTAACTTCCCTGATAAGCAAACACCCAAGGTGAAGCAAGAAGATCTTCTTCAGTTAAAGTAAATGAAGATGCTGTAGTGTCACTGTACTTCACGTTACTGGTAGTTTCGTACGTGGTAGTAAACGTAGGTTTATCTTGAATGTCATCCATCGGTGTGAGGGAAAGCTCAGTAGTAGTTGTTAACACAGCAAGTGCGTGCCCGCCAGCCTGTGTTAGCAAGTCCATACGTTCGGTTGTTACCTTTCGCTCGGTTTCCCAATATCGAATGTCATACTCATAGGCATAATCAGATATCTCGTAGACTGTTTCTTCATCAAACCGACTATAGATTTCTTCATCAAGAAACACAAAGTTTGCGTTGAGCGACTGGTCAAGCTCTTCAATAACTAAGTTTCCGTCTACAGTGCTCCAGTTAAATTCATCTGAATAAATATTAAATGCATTTTCCGCAGACGTTTTTTCTCCGCTGCCATCTGCATTGAACGTGTAAGCTGTCATGCCTTTGCCAGCTTGCTGCTCTGAGTGGTAGTAAGTCGCAAAAACCGCACCCGCAATGTCGGTATCTACGTAATTTTGCTGTAATGTTTCATCTTCAAGAGTTTCTGCTCGGGCAGCATTAATGGCCTTTACATAAGCTTCATCATAAGTACCGTCTTCATTCAACAAGCCTAAACTATCCACATACTGTCGAATGGTGCTAAGTACATCGACTAAGCTTCCAGTGAAGAACGACAAGGTACTCATACCTTCAGGAAGCGAGAATTCGCTATTATCAGCGAGCACTTTAATAAAGCTGGCCAATCCTAATACTTGTTCGAAGTCCACTTCACTTGCAAAGGTATCGAAGCTTCCCTCGCCGCCATTGTCTTTATACTCTATATAAAGTACATCCACTGCCGTACTTATATGAGTTATCTTACTTTCAGGCAGCAGGTCGCCGGTAAGTTCATCAGTATTATTTTCAATGCTAAGGTTACGAAGCGCTGTAAAAGTACCTATATGAGACGTTAGGGTTACGTGAGCTTGTTCTTCAGTGCCAACTGCATTAAGAATTAAATCGCCGGGCGCAGCAGATACTGTAATAGGTAGCGTGAAGCGGCCATCTGCACCGGCCTGCGTGGTAGCAATTACATTGCCGCTTGTATCGAGCGCAGTCACTTCTGCATTAGCTAAAGGCGCATCGGTTGCGATACTTGAAATAGAAACAGACTGTTGATTCGTGATGGTAACCGTTGAACTTACTGTGTTCTCACCATCAGTGACATCGTAAGAGAAACTGACTTCGCCCATCGCTAAAGCTGTGGGCGTATAAACGACTTCATTATTAATGATAGCTGCTTCACCCACATCTGGCGCGCTGATCGCTGATATGGTTAATGCATCACCTTCGGGGTCGGTATCGTTAGCAAGTACATCTATAGAAACAGCGTCACCATTTAGCGTAACCGCAGAATCGGCAGTAAGTACTGGTGCTTCATTGGTGTCGTCGGAACCGCCACAGGCGGTAAGAAGAGTTGCACTAACGGCAATAGCAATAATGCTTTTGTTCATTTCGAACGTCCCTATTCTGATTTTTTTAAATTATAAATTCGCTATGCAGCGAAACTGATTTGTTATCATAGCGTAAAAAAATGAAAATATGGAAGAAATAGCCAGAAAAAGTAGCAAGTAATAATGCGGAGATTTCGAAGGTTGTATAGATCGTGAGTTGTGGGGTCAGAGTATTTACTCTGCCCCCCACAATTTGATTTAGTCGGCGTTGAACAGGTCGCGGCTGTAAACTTTGTCGAGTACGTCTTCGATATCGCCCGTTACACGGTTGGCTACGATAACATCAGAAATTTTCTTAAACTCTTCTAGGTCGTTTACTACCCGTGAATTGAAGAAGTCATCTTCTTTGAGTACTGGCTCGTAAACTACCACTTCAATACCTTTCGCTTTAATACGCTTCATAATGCCTTGAATTGCACTGGCGCGGAAGTTGTCAGAACCGGATTTCATGATAAGGCGGTATATGCCAACAATTTTGGGCTGACGACTTACGATTGAATCAGCAATAAAGTCTTTACGTGTACGGTTAGCATCAACAATGGCCTGAATCATGTTATTCGGCACTTCACTGTAGTTAGCCAACAATTGTTTAGTATCTTTTGGTAAGCAGTAACCACCGTAGCCAAAGCTTGGGTTGTTGTAATGCTTACCAATTCGAGGGTCTAAGCCAACACCTTCAATGATTTGTTTGGTGTCTAAGCCATTTCGTTCTGCGTAGCTATCTAACTCGTTGAAGTAGGCAACACGCATCGCTAAATAAGTATTAGCGAAAAGCTTAATCGCTTCTGCCTCTGTGCTATCGGTAAATAGCACCTCTATGTCTTCTTTTATCGCACCTTGCTGCAGCAATTTAGCGAAAACTTCTGCTCGTTCGCTTTGCTCGCCCACAATAATGCGGCTAGGGTAAAGGTTGTCGTAAAGTGCTTTACCTTCACGTAAAAATTCTGGAGAAAAGATAATGTTGTCCGAACCGAAACGGGCTTTTGCGTCTTTGGTAAACCCTACTGGCACGGTCGATTTAACAATCATTACAGCATCAGGGTTAATTTCCATTACCGTTTTGATAACCGCTTCTACGCTACCTGTATTGAAGTAGTTAGTCTGTGGGTCGTAATCGGTTGGTGTTGCAATAACCACATAATCGGCATCTTTATATGCTACCTGTGCATCTAACGTAGCTTCAAGATTAAGCTCTTTAGTCGTTAGGTACTCAGAAATCTCTTTGTCTTCAATTGGAGACTTTTTGTTATTCAGCATCTCGACCTTTTCAGGTACCAAGTCGACCGCTTTCACTTCGTTGTGTTGTGCTAGTAACACGGCATTTGATAAGCCTACGTACCCAGTACCTGCTACTGCTATTTTGTACTTTGCTAGCGAACTTTCCATTTATGGTTTCTCCAATCCTATTACCTATCGATGATAGAAGTAATTACTTAAATATTTTCACGTATATTGCCAGAGTTTTTTGAAAATCTCATGAACAATGCATCATTAAGGTGCTCAATTTGATATAGCGCTGATGACTCGGTGCATCTCGCCGCCCAACTACAACGTTTATCATTAAGCTTTAGTGGCATGGTTCTTTAGAAGCAACAATCACACCACTAAGAATATTGCATTCGAAAACAAAAAAGCCTCAGCATACTAAGTAAGCTGAGGCCTAAAAACTAATAAGAGCTAACTAACTACCCGTGCCTAAACGCTCGCCTTGATAACTACCGTCAAGCACAGCTTTCCACCAGCCTTCATTCGCTAAATACCATTCAACGGTTTTACGAATGCCGCTTTCAAAGGTTTCTTGTGGTTTCCATCCTAGCTCACGTTCAATCTTACTGGCATCAATGGCATAGCGCATATCGTGACCTGGGCGGTCTTGAACGTAAGTGATCTGCTCGGCGTATTTGCTTTCTTTCGGCTTAACTTCATCCAAAATAGTGCAAATAGTTTGCACTACTTCAATGTTTTGTTTTTCGTTATGCCCACCAATATTGTAGGTTTCACCAATTTCACCGTTTAGCGCAACCACAACTAATGCGCGCGCATGGTCTTCAACATACAGCCAGTCGCGAATTTGGTTACCTTTGCCATACACTGGCAGCGGCTTGCCCGCTAGCGCATTTAAAATAACTAACGGTATAAGCTTTTCAGGGAAATGATACGGCCCATAGTTATTTGAGCAATTAGTTACTAATGTTGGTAGCTTATAGGTACGCAGCCACGAACGTACTAGCTGATCAGAACTTGCTTTACTCGCTGAATAAGGGGAACTTGGTGCATACGGGGTAGTTTCCGTAAACAATGGAAGCTCTGTGCCTGGCTCAACTTCATCAGGGTGAGGAAGGTCGCCGTATACTTCATCAGTAGAAATATGGTGGAACTTAAACCCTGCTTTTTTAACGCCCTCAAGCTCAGACCAATACGCTCTTGCTTGCTCAAGTAAAGTGTATGTACCTACTACGTTGGTTTGAATAAACTCACCTGGCCCATCAATTGAACGGTCTACATGAGATTCTGCCGCTAAGTGCATAATGATATCTGGCTGGTGCGTGTTGAAAACACGCTTCACTTCTTCAGCATCACAAATATCAACTTGTTCAAAGCTATAGCGGTCGCTGCTTGAAACGGATGTTAATGACTCTAAATTACCCGCATAAGTTAGCTTGTCTAAATTCACTACCGTGTGATCAGTATCATTTATAAGATGGCGTACCACGGCAGAACCAATAAAGCCTGCACCACCTGTTACTAAAATTGTTTTGCTCATTTTCTATTTACCAAAAATATAATTCTGTTTTTACCATTTAGGCTTTCAATTCATCTAACATGCTGGCTAATTGCTTGCGCCAGTGAGTAAGCTTGCAGGTAGCAAACGCTTCGCGTGCAGTTTGTTTATCCAATACACTGTAGTGTGGGCGTTTTGCAGGCGTGGGGTACTGGCTAGAAGGAATTGGCAATACTGGAATCAAGTTATCTAGCAATCCTTTCTCAACGCCTAACTCTTGAATAGCTAAAGCAAAGTCGTACCAGCTTGCTACACCTTCATCAGTCCAGTGATAAACGCCTGCTGTTTTATTCTCAGCGGCAGAAACACAAGCTTCAGCCAAACCTTTAGCCCATGTGGGTGTACCAATTTGATCGTCTATCACAGTAAGTTGTGGTTTATCAGCCATTAAGCGCAGCATGGTTTTCACAAAGTTATTACCATGCGACGAGTAAACCCAAGCAGTACGAATTAGGCAGCTGGCATCTGGCAGTATTTCAAGCAGTGCTTTTTCGCCCGCTGCTTTTGATTTGCCATAAGCACCCTGTGGTTCAATAGGGTCGTCAGTTAAGTAAGGCGAACCTTTATGACCGTTAAACACATAATCGGTAGACACATGCACCATAAAAGCACCGTTTGCTTTACAGAACTTTGCTAAATTCTGGACAGCTAACGCATTGATGGCATTACACGCTTCAGTATCTTCTTCAGCTTTATCTACAGCGGTGTACGCTGACGCATTTATTAAAACATCTGCTGATAAAGGCGATAATTTTTCTTCAACATTAGAGGCGTTCATAATATCAATATCATCGCGCCCTAAAAACGTTACTTGGTGATCGCTGTTTTCTAGTTCACGAGAAAGCTCAAAAGCTAGCTGCCCAGACTTACCTATAATTACAATATTCATTAATCGCTAGTACTCTATAAAAAGCCAGTAAAAAACCGATAACAATTAAAACGTAGGTGCGTCTACAAATACCAACCCAGCTTCGTCTTTCCCCGAAAGTGAAGGCTTCTGACCATTCACTAAAGGCCAGTCGATATTTAATGTAGAGTCGTCGTACTTAACTGATATTTCAGACTCTGGGTGGTAATAGTCTGTGCACTTATACACGAACTCAGCAGATTCGCTGGTTACGTAGAAACCATGAGCAAAGCCTGCAGGAACCCAAAGCTGACGCTTGTTTTCTGCAGATAATGTCACGCCTACCCACTTACCGTAAGTAGGTGAGTCTTTACGCATATCTACGGCTACGTCGTACACTTCACCGCTAACTACACGTACTAATTTGCCTTGGGTTTGCTCCATTTGATAATGAAGGCCGCGAAGAATACCTTGGATAGATTTAGAGTGGTTATCCTGGACAAAATCTACATCTGCGCACTCTTTCTTAAACCAGTCGGTGCGAAAGGTTTCTAGAAAGAAGCCGCGCTCGTCGCCAAATACTTTAGGCTCGATGATTTTCACGTCAGGGATGTCTGTTTTAATTACTTGCATTTACTTTCCGTACAAACTGGCAATTTAAAATAAGAACAAAGGTGGCAGTGCCACCTTGTAAAATTTGATATGAAGCTAGATTTTAACTCTATCGTTAATGACTTTTAGCAGGTAATCACCATAGCCACTTTTCTTGAGTGGTGCCGCAAGCTTTTCAAGTTGCTCAGCGTCGATATAACCCATTCTATAAGCGACTTCTTCAGGGCAGCACACTTTTAAGCCCTGACGTTTTTCTATAGCCGCAACAAAGTTTGCAGCATCTAGTAACGAATCAAGCGTACCTGTATCCAGCCATGCTGAACCGCGCCCCATTAGCTCAACTTTCAGGCTGCCATCTTGAAGATACAGATTATTAAGATCGGTAATTTCGAGTTCGCCACGATGTGAAGGCTTCACCTCTTTCGCGAAATCTACTACGCGGTTGTCGTAGTAATAAAGACCGGTAACTGCATAGTTTGATTTAGGAACAGTAGGCTTTTCCTCGATGGAAAGTGCAGTCCAGTCATCGTCGAAATCAACTACACCATAACGCTCTGGGTCGTTAACGTGATATCCAAACACAGTTGCACCGTGCTCTTGCTTAAACGCATTCTGCAAAGACAACTTTAAGTCGTGGCCGTAATAAATGTTGTCGCCAAGAACCAGTGAACAGCTATCATTCCCAATGAACTCTTCGCCTATAAGGAACGCTTGCGCCAAGCCGTCTGGCGAAGGCTGAACCGCGTATTGAATATTCATTCCTAACGCTGAACCATCTCCAATAAGGTCGATAAACCTCTGCTGCTCTTCAGGCGTGGTGATGATGAGCACATCACGAATACCCGACATCATTAACGTGGTTAATGGGTAAAAAATCATCGGCTTGTCGTAAACAGGCATTAATTGCTTACTTACCACCTTAGTTAACGGGTGCAAACGTGTGCCAGATCCGCCAGCTAGTATTATTCCTTTTCTCAT

Protein sequences of DBSCAN-SWA_2

>NZ_CP041169|3728938:3736512|3732974_3734057_-|WP_141152805.1|DBSCAN-SWA
MSKTILVTGGAGFIGSAVVRHLINDTDHTVVNLDKLTYAGNLESLTSVSSSDRYSFEQVDICDAEEVKRVFNTHQPDIIMHLAAESHVDRSIDGPGEFIQTNVVGTYTLLEQARAYWSELEGVKKAGFKFHHISTDEVYGDLPHPDEVEPGTELPLFTETTPYAPSSPYSASKASSDQLVRSWLRTYKLPTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGKGNQIRDWLYVEDHARALVVVALNGEIGETYNIGGHNEKQNIEVVQTICTILDEVKPKESKYAEQITYVQDRPGHDMRYAIDASKIERELGWKPQETFESGIRKTVEWYLANEGWWKAVLDGSYQGERLGTGS
>NZ_CP041169|3728938:3736512|3731491_3732679_-|WP_141152804.1|DBSCAN-SWA
MESSLAKYKIAVAGTGYVGLSNAVLLAQHNEVKAVDLVPEKVEMLNNKKSPIEDKEISEYLTTKELNLEATLDAQVAYKDADYVVIATPTDYDPQTNYFNTGSVEAVIKTVMEINPDAVMIVKSTVPVGFTKDAKARFGSDNIIFSPEFLREGKALYDNLYPSRIIVGEQSERAEVFAKLLQQGAIKEDIEVLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAERNGLDTKQIIEGVGLDPRIGKHYNNPSFGYGGYCLPKDTKQLLANYSEVPNNMIQAIVDANRTRKDFIADSIVSRQPKIVGIYRLIMKSGSDNFRASAIQGIMKRIKAKGIEVVVYEPVLKEDDFFNSRVVNDLEEFKKISDVIVANRVTGDIEDVLDKVYSRDLFNAD
>NZ_CP041169|3728938:3736512|3735630_3736512_-|WP_141152808.1|DBSCAN-SWA
MRKGIILAGGSGTRLHPLTKVVSKQLMPVYDKPMIFYPLTTLMMSGIRDVLIITTPEEQQRFIDLIGDGSALGMNIQYAVQPSPDGLAQAFLIGEEFIGNDSCSLVLGDNIYYGHDLKLSLQNAFKQEHGATVFGYHVNDPERYGVVDFDDDWTALSIEEKPTVPKSNYAVTGLYYYDNRVVDFAKEVKPSHRGELEITDLNNLYLQDGSLKVELMGRGSAWLDTGTLDSLLDAANFVAAIEKRQGLKVCCPEEVAYRMGYIDAEQLEKLAAPLKKSGYGDYLLKVINDRVKI
>NZ_CP041169|3728938:3736512|3734094_3734964_-|WP_141152806.1|DBSCAN-SWA
MNIVIIGKSGQLAFELSRELENSDHQVTFLGRDDIDIMNASNVEEKLSPLSADVLINASAYTAVDKAEEDTEACNAINALAVQNLAKFCKANGAFMVHVSTDYVFNGHKGSPYLTDDPIEPQGAYGKSKAAGEKALLEILPDASCLIRTAWVYSSHGNNFVKTMLRLMADKPQLTVIDDQIGTPTWAKGLAEACVSAAENKTAGVYHWTDEGVASWYDFALAIQELGVEKGLLDNLIPVLPIPSSQYPTPAKRPHYSVLDKQTAREAFATCKLTHWRKQLASMLDELKA
>NZ_CP041169|3728938:3736512|3728938_3731293_-|WP_141152803.1|DBSCAN-SWA
MNKSIIAIAVSATLLTACGGSDDTNEAPVLTADSAVTLNGDAVSIDVLANDTDPEGDALTISAISAPDVGEAAIINNEVVYTPTALAMGEVSFSYDVTDGENTVSSTVTITNQQSVSISSIATDAPLANAEVTALDTSGNVIATTQAGADGRFTLPITVSAAPGDLILNAVGTEEQAHVTLTSHIGTFTALRNLSIENNTDELTGDLLPESKITHISTAVDVLYIEYKDNGGEGSFDTFASEVDFEQVLGLASFIKVLADNSEFSLPEGMSTLSFFTGSLVDVLSTIRQYVDSLGLLNEDGTYDEAYVKAINAARAETLEDETLQQNYVDTDIAGAVFATYYHSEQQAGKGMTAYTFNADGSGEKTSAENAFNIYSDEFNWSTVDGNLVIEELDQSLNANFVFLDEEIYSRFDEETVYEISDYAYEYDIRYWETERKVTTERMDLLTQAGGHALAVLTTTTELSLTPMDDIQDKPTFTTTYETTSNVKYSDTTASSFTLTEEDLLASPWVFAYQGSYTFDKEYLNEDERTEVGILNDQFTFKDDNTFTSLVYDAQGTWQLNNGVIDIELEGMSFTVTPFKAQNDFVLALYEFDNDGEVIKYTGDMHAINYELAEDFSIESSLPNIWMFSYNEAFFVDGVPLFDDVFGYYFEPDGSAGRVYSAFEEPYFVGDGELHNFQWTVDDNEVNIVGLRENSAFVFNREYTWKLLGSKQEDVVATLEMQSNKVDYTDDFNEDFVFNILPRLSFTFKLNLEEQYPEFWENTDVGSLNAPDISLSFSSELITR
>NZ_CP041169|3728938:3736512|3735009_3735555_-|WP_141152807.1|DBSCAN-SWA
MQVIKTDIPDVKIIEPKVFGDERGFFLETFRTDWFKKECADVDFVQDNHSKSIQGILRGLHYQMEQTQGKLVRVVSGEVYDVAVDMRKDSPTYGKWVGVTLSAENKRQLWVPAGFAHGFYVTSESAEFVYKCTDYYHPESEISVKYDDSTLNIDWPLVNGQKPSLSGKDEAGLVFVDAPTF

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_141152803.1|3728938_3731293_-	carboxypeptidase regulatory-like domain-containing protein	S0A4L9	Cellulophaga_phage	8.8e-05	38.9
WP_141152804.1|3731491_3732679_-	nucleotide sugar dehydrogenase	A0A1J0FA55	Only_Syngen_Nebraska_virus	1.3e-110	53.9
WP_141152805.1|3732974_3734057_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.2e-95	52.2
WP_141152806.1|3734094_3734964_-	dTDP-4-dehydrorhamnose reductase	A0A140G5S3	Enterobacteria_phage	4.8e-33	36.8
WP_141152807.1|3735009_3735555_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.0e-49	57.1
WP_141152808.1|3735630_3736512_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	4.6e-100	59.6