CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP041130	Serratia marcescens strain WVU-007 chromosome, complete genome	0 crisprs	DEDDh,RT,DinG,csa3,cas3,WYL,casR	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1130162 : 1207955

Salmonella_phage(31.91%)

portal,terminase,protease,capsid,head,transposase,tail,holin,integrase,tRNA,lysis

attL 1153197:1153212|attR 1186088:1186103

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050438932.1\|1130162_1130804_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_004940192.1\|1130771_1131458_+	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	4.4e-05	24.5
WP_060440543.1\|1131454_1133887_+	ABC transporter permease	NA	NA	NA	NA
WP_043146773.1\|1133956_1135024_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_073529319.1\|1135020_1135545_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_060440541.1\|1135694_1136417_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_004940183.1\|1136427_1136922_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_038875101.1\|1137231_1138617_+\|tRNA	cysteine--tRNA ligase	A0A0G2Y344	Acanthamoeba_polyphaga_mimivirus	2.9e-40	34.7
WP_049278727.1\|1138678_1138891_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004940177.1\|1138901_1139768_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	9.0e-32	34.7
WP_077267529.1\|1140000_1140183_+	hypothetical protein	NA	NA	NA	NA
WP_141984611.1\|1140697_1141819_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4R586	Salmonella_phage	2.3e-165	74.9
WP_141958157.1\|1142052_1142244_-	hypothetical protein	NA	NA	NA	NA
WP_141958159.1\|1142240_1142450_-	hypothetical protein	E5AGD4	Erwinia_phage	3.6e-11	50.0
WP_141958161.1\|1142442_1142664_-	hypothetical protein	NA	NA	NA	NA
WP_060429110.1\|1142734_1142989_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	3.8e-23	64.3
WP_060429108.1\|1142998_1143259_-	hypothetical protein	A0A1V0E5L9	Salmonella_phage	2.2e-18	56.6
WP_141984612.1\|1143316_1144051_-	hypothetical protein	NA	NA	NA	NA
WP_063990597.1\|1144061_1144295_-	hypothetical protein	NA	NA	NA	NA
WP_141984613.1\|1144296_1144776_-	hypothetical protein	R9W086	Serratia_phage	4.7e-14	39.4
WP_141984614.1\|1144768_1144993_-	hypothetical protein	NA	NA	NA	NA
WP_141984615.1\|1144982_1145216_-	hypothetical protein	R9VX58	Serratia_phage	2.1e-20	63.5
WP_141984616.1\|1145584_1145980_-	hypothetical protein	A0A2R3UAL4	Myoviridae_environmental_samples	4.3e-29	55.8
WP_141960596.1\|1145966_1146485_-	SAM-dependent methyltransferase	A0A0N7IRF6	Acinetobacter_phage	2.0e-63	73.5
WP_141984617.1\|1146499_1146973_-	hypothetical protein	NA	NA	NA	NA
WP_141984618.1\|1146969_1147149_-	hypothetical protein	NA	NA	NA	NA
WP_141958180.1\|1147157_1147490_-	hypothetical protein	NA	NA	NA	NA
WP_141958182.1\|1147517_1147973_-	single-stranded DNA-binding protein	A0A1B0VAF5	Salmonella_phage	1.1e-52	66.7
WP_141984619.1\|1147973_1148600_-	single-stranded DNA-binding protein	A0A1W6JP21	Morganella_phage	5.7e-68	65.5
WP_141958187.1\|1148888_1149020_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q9AZ26	Salmonella_phage	1.2e-07	60.5
WP_141958189.1\|1149176_1149416_-	hypothetical protein	NA	NA	NA	NA
WP_141958191.1\|1149535_1149733_-	hypothetical protein	NA	NA	NA	NA
WP_071883557.1\|1149750_1149999_-	hypothetical protein	Q9EYB0	Enterobacteria_phage	1.6e-05	36.7
WP_141984620.1\|1150565_1150811_-	hypothetical protein	NA	NA	NA	NA
WP_141984686.1\|1151104_1151806_-	helix-turn-helix domain-containing protein	A0A2I6PIE7	Escherichia_phage	1.2e-58	52.9
WP_038876081.1\|1151885_1152113_+	hypothetical protein	A0A2I6PIE5	Escherichia_phage	1.2e-20	67.1
WP_141984621.1\|1152241_1152520_+	hypothetical protein	A4KWU5	Enterobacteria_phage	7.9e-22	57.6
WP_141984622.1\|1152706_1153603_+	DNA replication protein	A0A0N7C1Z7	Escherichia_phage	7.3e-93	60.5
1153197:1153212	attL	NA	NA	NA	NA
WP_141984623.1\|1153589_1154996_+	AAA family ATPase	F1C5C4	Cronobacter_phage	4.7e-163	62.7
WP_141984624.1\|1155066_1155720_-	DUF4145 domain-containing protein	V5URE2	Shigella_phage	3.0e-48	47.2
WP_141984625.1\|1155706_1155910_+	hypothetical protein	NA	NA	NA	NA
WP_141984626.1\|1155902_1156340_+	recombination protein NinB	A0A2H4J8D9	uncultured_Caudovirales_phage	2.0e-48	68.8
WP_141984627.1\|1156336_1156507_+	NinE family protein	NA	NA	NA	NA
WP_141984628.1\|1156875_1157004_+	protein ninF	NA	NA	NA	NA
WP_141984629.1\|1156993_1157620_+	hypothetical protein	S4TSR3	Salmonella_phage	5.9e-41	45.5
WP_141984630.1\|1157947_1158439_+	DUF1133 family protein	I6S672	Salmonella_phage	8.9e-69	77.9
WP_042784831.1\|1158610_1158937_+	hypothetical protein	NA	NA	NA	NA
WP_042784830.1\|1158933_1159266_+\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	2.5e-43	72.5
WP_141984631.1\|1159249_1159684_+	glycoside hydrolase family protein	Q5G8R3	Enterobacteria_phage	6.7e-52	71.7
WP_141984632.1\|1159680_1160127_+\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	7.0e-20	46.9
WP_141984633.1\|1160296_1160548_+	hypothetical protein	A0A1B2IEH2	Erwinia_phage	1.9e-19	61.4
WP_141984634.1\|1160920_1161151_+	DUF2560 family protein	A0A192Y6S9	Salmonella_phage	8.5e-14	54.8
WP_141958224.1\|1161310_1161643_+	DUF1737 domain-containing protein	NA	NA	NA	NA
WP_141958226.1\|1161645_1162086_+\|terminase	terminase	C7U0V7	Enterobacteria_phage	9.8e-75	89.7
WP_141958228.1\|1162082_1163495_+\|terminase	PBSX family phage terminase large subunit	Q9AZ00	Salmonella_phage	1.2e-264	93.4
WP_141958230.1\|1163497_1165624_+\|portal	portal protein	Q9AYZ9	Salmonella_phage	0.0e+00	89.1
WP_141958232.1\|1165637_1166522_+\|capsid	phage capsid protein	Q716H1	Shigella_phage	7.2e-101	74.1
WP_141958234.1\|1166533_1167808_+\|head	head protein	Q716H0	Shigella_phage	1.8e-222	92.2
WP_141958236.1\|1167847_1168033_+	hypothetical protein	Q716G9	Shigella_phage	3.4e-21	78.7
WP_004940081.1\|1168007_1168490_+\|head	head DNA stabilization protein	Q716G8	Shigella_phage	7.4e-76	83.6
WP_141984635.1\|1168497_1169925_+	hypothetical protein	Q9AYZ4	Salmonella_phage	4.1e-207	70.7
WP_141958240.1\|1169927_1170422_+	hypothetical protein	A0A1U9HWQ1	Salmonella_phage	1.2e-33	46.6
WP_141958242.1\|1170418_1171330_+\|tail	phage tail protein	Q76H17	Enterobacteria_phage	2.5e-32	55.8
WP_141958244.1\|1171329_1171788_+	DUF2824 family protein	G5DA79	Enterobacteria_phage	2.0e-70	83.7
WP_141958246.1\|1171798_1172497_+	DNA transfer protein	A0A2H4FUQ9	Salmonella_phage	4.9e-36	49.2
WP_141984636.1\|1172496_1173846_+	DNA injection protein	E7C9U5	Salmonella_phage	2.3e-50	40.2
WP_141984637.1\|1173845_1176323_+	transglycosylase SLT domain-containing protein	A5VW64	Enterobacteria_phage	6.9e-218	67.6
WP_141984638.1\|1176831_1177083_-	Arc family DNA-binding protein	E7C9U8	Salmonella_phage	1.1e-22	64.2
WP_141958260.1\|1180104_1181310_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.8e-132	58.0
WP_141958262.1\|1181713_1183930_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_077038822.1\|1183944_1184403_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_038880661.1\|1184414_1185719_+	c-type cytochrome	NA	NA	NA	NA
WP_077038925.1\|1186135_1187257_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
1186088:1186103	attR	NA	NA	NA	NA
WP_141958265.1\|1187276_1190372_+	MMPL family transporter	S5VTK5	Leptospira_phage	5.3e-50	21.2
WP_141958267.1\|1190383_1191811_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_126171419.1\|1191910_1192879_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_141958270.1\|1193047_1194700_+	Na+/H+ antiporter	A0A2H4J178	uncultured_Caudovirales_phage	2.7e-08	27.5
WP_141958272.1\|1194884_1195469_+	LysE family transporter	NA	NA	NA	NA
WP_141958274.1\|1196577_1197771_+	gluconolaconase	NA	NA	NA	NA
WP_141958276.1\|1197908_1198436_-	hypothetical protein	NA	NA	NA	NA
WP_141958280.1\|1199848_1200397_+	fimbrial protein	NA	NA	NA	NA
WP_141960600.1\|1200480_1201026_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_141984639.1\|1201090_1203730_+	outer membrane usher protein	NA	NA	NA	NA
WP_126171449.1\|1203829_1204582_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_126171429.1\|1204645_1205305_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_126171430.1\|1205315_1205819_+	fimbrial protein	NA	NA	NA	NA
WP_126171431.1\|1205832_1206333_+	fimbrial protein	NA	NA	NA	NA
WP_126171432.1\|1206343_1206916_+	fimbrial protein	NA	NA	NA	NA
WP_126171433.1\|1206908_1207955_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

2091690 : 2174489

111

Salmonella_phage(32.91%)

portal,terminase,lysis,capsid,plate,tail,holin,integrase,head

attL 2104690:2104705|attR 2147128:2147143

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_141958829.1\|2091690_2092773_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.1e-98	49.6
WP_072022390.1\|2092747_2093020_-	hypothetical protein	A0A2H4J5E1	uncultured_Caudovirales_phage	3.4e-09	37.2
WP_060444327.1\|2093095_2093599_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	1.5e-34	50.9
WP_141958831.1\|2093595_2095728_-	hypothetical protein	H9C157	Pectobacterium_phage	5.2e-97	34.5
WP_141958833.1\|2095742_2096063_-	hypothetical protein	NA	NA	NA	NA
WP_141958835.1\|2096384_2096618_-	hypothetical protein	NA	NA	NA	NA
WP_141958836.1\|2096754_2097066_-	hypothetical protein	NA	NA	NA	NA
WP_116286447.1\|2097078_2097252_-	DUF1482 family protein	NA	NA	NA	NA
WP_082245749.1\|2097274_2097472_-	hypothetical protein	NA	NA	NA	NA
WP_116286446.1\|2097735_2098179_-	helix-turn-helix domain-containing protein	K7PHG0	Enterobacteria_phage	1.3e-05	30.3
WP_116286445.1\|2098246_2098483_+	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	1.6e-15	47.9
WP_141958838.1\|2098502_2098967_+	hypothetical protein	NA	NA	NA	NA
WP_141958840.1\|2098981_2099209_+	cell envelope biogenesis protein OmpA	NA	NA	NA	NA
WP_141958842.1\|2099248_2100247_+	hypothetical protein	NA	NA	NA	NA
WP_082245762.1\|2100262_2100646_+	hypothetical protein	A0A2P1JUB0	Erwinia_phage	2.3e-40	58.7
WP_141958844.1\|2100661_2101087_+	hypothetical protein	NA	NA	NA	NA
WP_141958846.1\|2101124_2101952_+	chromosome partitioning protein ParB	K7PKM7	Enterobacterial_phage	2.9e-56	43.1
WP_141958848.1\|2101948_2102356_+	hypothetical protein	NA	NA	NA	NA
WP_141958850.1\|2102348_2102651_+	hypothetical protein	NA	NA	NA	NA
WP_141958852.1\|2102812_2103919_+	AAA family ATPase	R4TQL5	Phaeocystis_globosa_virus	5.4e-21	32.5
WP_141958854.1\|2103925_2106184_+	S8 family serine peptidase	NA	NA	NA	NA
2104690:2104705	attL	NA	NA	NA	NA
WP_060444338.1\|2106677_2107274_+	DUF1367 family protein	H9C173	Pectobacterium_phage	5.2e-55	53.5
WP_116286438.1\|2107270_2107558_+	DUF1364 domain-containing protein	E5AGG0	Erwinia_phage	1.5e-28	64.5
WP_141958856.1\|2107554_2108205_+	antitermination protein	A0A286N2Q2	Klebsiella_phage	2.4e-21	29.3
WP_141958858.1\|2108461_2108785_+\|holin	phage holin, lambda family	Q8LTF0	Salmonella_phage	3.4e-16	46.5
WP_141958860.1\|2108777_2109167_+	M15 family metallopeptidase	S4TRL9	Salmonella_phage	1.4e-48	69.8
WP_141958862.1\|2109163_2109547_+	DUF2570 family protein	NA	NA	NA	NA
WP_141958864.1\|2109485_2109704_+	hypothetical protein	NA	NA	NA	NA
WP_033638085.1\|2110030_2110249_+	hypothetical protein	NA	NA	NA	NA
WP_141958866.1\|2110633_2111143_+	ParB N-terminal domain-containing protein	A0A0R6PD10	Moraxella_phage	1.3e-35	48.4
WP_141958868.1\|2111139_2111754_+	protein Mom	C9E2P8	Enterococcus_phage	7.5e-65	61.6
WP_033638087.1\|2111756_2112014_+	hypothetical protein	NA	NA	NA	NA
WP_141958870.1\|2112021_2113017_+\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	1.8e-60	50.8
WP_141958872.1\|2113016_2114657_+\|terminase	phage terminase large subunit	H9C191	Pectobacterium_phage	5.3e-267	79.6
WP_141958874.1\|2114659_2116060_+	DUF1073 domain-containing protein	H9C192	Pectobacterium_phage	4.2e-180	67.0
WP_141960647.1\|2116109_2116862_+\|head	phage head morphogenesis protein	H9C193	Pectobacterium_phage	1.8e-92	68.7
WP_141958876.1\|2116870_2118052_+	DUF2213 domain-containing protein	H9C194	Pectobacterium_phage	8.9e-107	64.8
WP_141958878.1\|2118051_2118579_+	hypothetical protein	H9C195	Pectobacterium_phage	8.7e-46	58.4
WP_060444351.1\|2118632_2119571_+	DUF2184 domain-containing protein	H9C196	Pectobacterium_phage	7.8e-130	72.4
WP_050596002.1\|2119571_2119913_+	hypothetical protein	NA	NA	NA	NA
WP_141958880.1\|2119972_2120395_+	DUF4054 domain-containing protein	H9C198	Pectobacterium_phage	2.4e-38	61.0
WP_033638095.1\|2120391_2120859_+	hypothetical protein	H9C199	Pectobacterium_phage	5.7e-65	83.2
WP_033638096.1\|2120861_2121281_+	hypothetical protein	H9C1A0	Pectobacterium_phage	8.2e-63	80.7
WP_141958882.1\|2121280_2121817_+	hypothetical protein	H9C1A1	Pectobacterium_phage	9.5e-40	50.8
WP_141958884.1\|2121832_2123083_+	DUF3383 family protein	H9C1A2	Pectobacterium_phage	1.5e-144	62.3
WP_033638099.1\|2123089_2123494_+	hypothetical protein	H9C1A3	Pectobacterium_phage	3.5e-55	79.1
WP_141958886.1\|2123493_2123892_+	hypothetical protein	H9C1A4	Pectobacterium_phage	1.4e-35	60.5
WP_072022396.1\|2124152_2124359_+	hypothetical protein	NA	NA	NA	NA
WP_141958888.1\|2124413_2124905_+	hypothetical protein	NA	NA	NA	NA
WP_141958890.1\|2124969_2126640_+	glycoside hydrolase family protein	H9C1A7	Pectobacterium_phage	1.5e-107	43.0
WP_141958892.1\|2126639_2127338_+	hypothetical protein	H9C1A8	Pectobacterium_phage	2.7e-34	40.6
WP_141960649.1\|2127342_2127624_+	hypothetical protein	H9C1A9	Pectobacterium_phage	8.5e-24	59.6
WP_141958894.1\|2127616_2128516_+	hypothetical protein	H9C1B0	Pectobacterium_phage	2.7e-79	48.5
WP_141958896.1\|2128523_2129126_+	hypothetical protein	H9C1B1	Pectobacterium_phage	1.9e-57	51.4
WP_033638104.1\|2129140_2129491_+	hypothetical protein	H9C1B2	Pectobacterium_phage	1.9e-41	70.4
WP_141958898.1\|2129490_2130696_+\|plate	phage baseplate protein	H9C1B3	Pectobacterium_phage	1.8e-142	62.7
WP_141958900.1\|2130688_2131543_+	DUF2612 domain-containing protein	H9C1B4	Pectobacterium_phage	4.1e-77	53.5
WP_141958902.1\|2131568_2133200_+	hypothetical protein	NA	NA	NA	NA
WP_141958904.1\|2133252_2135235_+\|tail	phage tail protein	H9C1B7	Pectobacterium_phage	8.0e-92	37.0
WP_141958906.1\|2135515_2136337_+	cytidine deaminase	A0A2I2L4R9	Orpheovirus	1.3e-11	34.6
WP_141958908.1\|2136788_2138393_+	hypothetical protein	NA	NA	NA	NA
WP_141958910.1\|2138699_2139554_+	hypothetical protein	NA	NA	NA	NA
WP_141960651.1\|2139789_2139831_-	hypothetical protein	NA	NA	NA	NA
WP_141984644.1\|2140167_2141256_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4S6G4	Salmonella_phage	9.7e-124	61.4
WP_071844562.1\|2141371_2141590_-	hypothetical protein	Q53ZE7	Salmonella_virus	6.2e-22	65.3
WP_141984645.1\|2141663_2142761_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	9.1e-122	64.6
WP_141984646.1\|2142757_2143222_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.9e-46	62.7
WP_141984647.1\|2143218_2145762_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	7.7e-156	54.2
WP_071844561.1\|2145754_2145874_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	2.5e-09	66.7
WP_141984648.1\|2145888_2146179_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.3e-23	58.9
WP_141984649.1\|2146239_2146755_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	6.9e-64	69.0
WP_141984650.1\|2146765_2147941_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.0e-179	81.2
2147128:2147143	attR	NA	NA	NA	NA
WP_141984651.1\|2148140_2149211_-\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	3.1e-34	52.3
WP_141984652.1\|2149203_2152518_-	hypothetical protein	A0A1V0E6N8	Klebsiella_phage	5.5e-77	28.2
WP_141984653.1\|2152519_2153119_-\|tail	phage tail protein I	E5G6N9	Salmonella_phage	9.6e-57	60.1
WP_141984654.1\|2153111_2154020_-\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	3.5e-111	69.2
WP_141984655.1\|2154016_2154367_-\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	7.1e-28	55.0
WP_141984656.1\|2154363_2154957_-\|plate	phage baseplate assembly protein V	S4TUB5	Salmonella_phage	1.8e-55	57.3
WP_141984657.1\|2155102_2155549_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.0e-35	50.0
WP_141984658.1\|2155541_2155973_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	5.0e-39	59.0
WP_141984659.1\|2155935_2156196_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	4.2e-17	53.7
WP_141984660.1\|2156080_2156539_-\|lysis	LysB family phage lysis regulatory protein	E5FFH9	Burkholderia_phage	2.0e-06	49.2
WP_141984661.1\|2156535_2157033_-	glycoside hydrolase family protein	S4TUB1	Salmonella_phage	2.5e-50	61.2
WP_141984662.1\|2157007_2157337_-\|holin	phage holin family protein	A0A077KER0	Ralstonia_phage	1.2e-08	41.0
WP_046373881.1\|2157339_2157708_-	hypothetical protein	NA	NA	NA	NA
WP_046373880.1\|2157712_2157916_-\|tail	tail protein X	E5G6M9	Salmonella_phage	3.4e-22	70.1
WP_060429982.1\|2157915_2158380_-\|head	head completion/stabilization protein	E5G6M8	Salmonella_phage	8.8e-42	55.2
WP_082100051.1\|2158478_2159114_-\|terminase	terminase endonuclease subunit	F1BUQ7	Erwinia_phage	4.7e-54	54.3
WP_141984663.1\|2159152_2160217_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	7.7e-142	73.0
WP_089187107.1\|2160277_2161111_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	5.0e-80	68.7
WP_141984664.1\|2161254_2163021_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	6.7e-300	83.5
WP_141984665.1\|2163020_2163704_+\|terminase	terminase-like family protein	A0A218M4L2	Erwinia_phage	3.7e-28	35.6
WP_141984666.1\|2163700_2164744_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	5.6e-153	79.2
WP_089187110.1\|2165193_2165427_-	hypothetical protein	NA	NA	NA	NA
WP_046373869.1\|2165430_2165616_-	hypothetical protein	NA	NA	NA	NA
WP_141984687.1\|2165801_2166494_-	DNA adenine methylase	A0A0M4S5U3	Salmonella_phage	1.3e-70	59.6
WP_141984667.1\|2166594_2169069_-	replication endonuclease	F1BUS0	Erwinia_phage	2.7e-238	57.0
WP_141984668.1\|2169071_2169329_-	hypothetical protein	A0A2H4EW60	Aeromonas_phage	2.1e-13	51.9
WP_141984669.1\|2169321_2169555_-	hypothetical protein	NA	NA	NA	NA
WP_141984670.1\|2169554_2169833_-	hypothetical protein	NA	NA	NA	NA
WP_141984671.1\|2169829_2170048_-	hypothetical protein	NA	NA	NA	NA
WP_141984672.1\|2170041_2170866_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	E5G6L8	Salmonella_phage	1.1e-63	45.9
WP_060429999.1\|2170868_2171087_-	TraR/DksA family transcriptional regulator	A0A218M4I6	Erwinia_phage	2.7e-17	61.1
WP_141984673.1\|2171086_2171359_-	DUF2732 family protein	NA	NA	NA	NA
WP_141984674.1\|2171425_2171779_-	DUF5347 family protein	E5G6L5	Salmonella_phage	2.1e-27	54.5
WP_072269748.1\|2171742_2171952_-	DUF2724 domain-containing protein	F1BUS5	Erwinia_phage	1.7e-08	52.8
WP_141984675.1\|2171962_2172472_-	phage regulatory CII family protein	F1BUS6	Erwinia_phage	1.2e-47	57.4
WP_141984676.1\|2172503_2172896_-	hypothetical protein	NA	NA	NA	NA
WP_141984688.1\|2173009_2173855_+	phage repressor protein CI	Q6K1G0	Salmonella_virus	5.7e-71	47.0
WP_141984677.1\|2173864_2174257_+	hypothetical protein	NA	NA	NA	NA
WP_071844559.1\|2174288_2174489_+	hypothetical protein	A0A0R6PIB1	Moraxella_phage	1.4e-07	52.5

DBSCAN-SWA_3

2334444 : 2375414

Moraxella_phage(25.0%)

coat,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_141959028.1\|2334444_2335863_+\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_004931526.1\|2336009_2336219_-	hypothetical protein	NA	NA	NA	NA
WP_004931522.1\|2336995_2337388_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_060419277.1\|2337392_2337992_+	hypothetical protein	NA	NA	NA	NA
WP_100396313.1\|2338047_2338287_-	YebV family protein	NA	NA	NA	NA
WP_060440091.1\|2338422_2339355_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_141960660.1\|2339374_2341717_-	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_049201714.1\|2341868_2342636_-	molecular chaperone	NA	NA	NA	NA
WP_141959029.1\|2342657_2343200_-	fimbrial major subunit CsuA/B family protein	NA	NA	NA	NA
WP_038877669.1\|2343193_2343697_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_060440090.1\|2343699_2344236_-	fimbrial major subunit CsuA/B family protein	NA	NA	NA	NA
WP_060419268.1\|2344510_2345047_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_141959031.1\|2345319_2346756_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_087763559.1\|2346858_2349489_-	PqiB family protein	NA	NA	NA	NA
WP_049198592.1\|2349457_2350705_-	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_126180031.1\|2350960_2351458_+	GAF domain-containing protein	NA	NA	NA	NA
WP_033638287.1\|2351554_2352265_+	RNA chaperone ProQ	NA	NA	NA	NA
WP_033642845.1\|2352284_2354333_+	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	1.5e-85	33.9
WP_038877656.1\|2354400_2355246_-	DMT family transporter	NA	NA	NA	NA
WP_141959033.1\|2355242_2356550_-	opine metallophore biosynthesis dehydrogenase	NA	NA	NA	NA
WP_060440085.1\|2356542_2357340_-	nicotianamine synthase	NA	NA	NA	NA
WP_087763515.1\|2357327_2358113_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	8.8e-10	27.9
WP_060440083.1\|2358109_2359150_-	iron ABC transporter permease	NA	NA	NA	NA
WP_089185885.1\|2359152_2360244_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_033638291.1\|2360614_2361493_+\|protease	protease HtpX	NA	NA	NA	NA
WP_102984783.1\|2361543_2362938_-	MFS transporter	NA	NA	NA	NA
WP_049274096.1\|2363168_2363960_+	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_141959035.1\|2364006_2364810_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_141959037.1\|2364812_2365676_-	2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA
WP_141959039.1\|2365677_2366814_-	2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT	G3M9Y6	Bacillus_virus	7.4e-26	33.7
WP_141959041.1\|2366810_2367821_-	2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_102984780.1\|2367995_2368715_-	phosphonate utilization transcriptional regulator PhnR	NA	NA	NA	NA
WP_141959043.1\|2368870_2369974_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_141959045.1\|2369983_2370793_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_089185892.1\|2370857_2372255_-	L-cystine transporter	NA	NA	NA	NA
WP_141959047.1\|2372430_2372979_-	metal-dependent hydrolase	A0A127AVX7	Bacillus_phage	1.4e-06	35.1
WP_049198577.1\|2373403_2374069_-	hexitol phosphatase HxpB	NA	NA	NA	NA
WP_141959049.1\|2374133_2375414_-\|protease	protease	NA	NA	NA	NA

DBSCAN-SWA_4

4105903 : 4166486

Enterobacteria_phage(13.04%)

tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015378796.1\|4105903_4106410_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	4.5e-07	32.2
WP_070914449.1\|4106527_4107580_+	DUF2157 domain-containing protein	NA	NA	NA	NA
WP_141959967.1\|4107627_4108284_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA
WP_070914445.1\|4108287_4109655_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_087762398.1\|4109673_4110567_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_033654299.1\|4110734_4111583_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_141960711.1\|4111834_4113271_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_025303942.1\|4113362_4113623_+	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	8.4e-18	52.3
WP_019452319.1\|4113668_4114049_-	holo-ACP synthase	NA	NA	NA	NA
WP_141959969.1\|4114048_4114780_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_004929165.1\|4114851_4115583_-	DNA repair protein RecO	NA	NA	NA	NA
WP_004929162.1\|4115589_4116498_-	GTPase Era	NA	NA	NA	NA
WP_004929158.1\|4116494_4117175_-	ribonuclease III	A0A2K9L5P0	Tupanvirus	9.6e-21	31.3
WP_033644122.1\|4117410_4118388_-	signal peptidase I	NA	NA	NA	NA
WP_033648940.1\|4118420_4120220_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	3.2e-23	25.5
WP_141959971.1\|4120738_4121575_+	hypothetical protein	NA	NA	NA	NA
WP_141959972.1\|4121571_4122048_-	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_141959973.1\|4122047_4123004_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_049200771.1\|4123003_4123657_-	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_004929136.1\|4123687_4124263_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_043128468.1\|4124441_4126079_+	L-aspartate oxidase	NA	NA	NA	NA
WP_141959975.1\|4126117_4126897_-	methyltransferase	NA	NA	NA	NA
WP_016929798.1\|4126996_4128319_+	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	3.6e-40	27.3
WP_141959977.1\|4128371_4129127_-	ankyrin repeat domain-containing protein	Q9JMM8	Wolbachia_phage	8.2e-05	39.2
WP_141959979.1\|4129119_4130082_-	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_004929114.1\|4130265_4130649_-	autonomous glycyl radical cofactor GrcA	C3V1I5	Escherichia_virus	6.1e-33	70.2
WP_033635636.1\|4130995_4131679_+	uracil-DNA glycosylase	A0A076JX67	Equid_alphaherpesvirus	2.5e-53	47.9
WP_025303955.1\|4131734_4132319_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_019452304.1\|4132444_4133323_+	NAD(+) kinase	NA	NA	NA	NA
WP_089186358.1\|4133409_4135071_+	DNA repair protein RecN	NA	NA	NA	NA
WP_004929101.1\|4135311_4135650_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_087762394.1\|4135768_4136053_-	RnfH family protein	NA	NA	NA	NA
WP_086016675.1\|4136045_4136534_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_004929094.1\|4136641_4137124_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.1e-26	44.9
WP_141959981.1\|4137671_4138808_-	biotin/lipoyl-binding protein	NA	NA	NA	NA
WP_046687688.1\|4138817_4139162_-	DUF3302 domain-containing protein	NA	NA	NA	NA
WP_041036393.1\|4139200_4139854_-	DUF3313 domain-containing protein	NA	NA	NA	NA
WP_085337239.1\|4139989_4140925_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_141960713.1\|4140980_4142594_-	DUF2534 family protein	NA	NA	NA	NA
WP_141959983.1\|4142713_4143124_-	DUF2946 family protein	NA	NA	NA	NA
WP_141959985.1\|4143242_4143695_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_141959987.1\|4143795_4144530_+	methyltransferase domain-containing protein	A0A1X9I6N4	Streptococcus_phage	1.8e-52	43.2
WP_141959989.1\|4144591_4145089_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_141959991.1\|4145174_4146101_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_141959993.1\|4146095_4146611_-	DUF1543 domain-containing protein	NA	NA	NA	NA
WP_025303973.1\|4146731_4146914_+	DUF2158 domain-containing protein	NA	NA	NA	NA
WP_047730014.1\|4146946_4147225_-	N-acetyltransferase	NA	NA	NA	NA
WP_016929825.1\|4147226_4147457_-	hypothetical protein	NA	NA	NA	NA
WP_016929826.1\|4147648_4148062_+	DoxX family protein	NA	NA	NA	NA
WP_141959995.1\|4148140_4150087_-	hypothetical protein	W6ATR4	Escherichia_phage	4.0e-43	58.5
WP_141959997.1\|4150208_4152242_-\|tail	phage tail protein	A0A1I9SF20	Klebsiella_phage	2.6e-29	44.8
WP_141959999.1\|4152299_4158053_-	DUF1983 domain-containing protein	M9P0D8	Enterobacteria_phage	6.4e-291	55.8
WP_060441078.1\|4158071_4158692_-\|tail	tail assembly protein	K7PH59	Enterobacterial_phage	1.4e-55	53.2
WP_141960001.1\|4158688_4159399_-	peptidase P60	M9NZD8	Enterobacteria_phage	1.7e-81	56.6
WP_141960004.1\|4159401_4160154_-\|tail	phage minor tail protein L	K7P6G9	Enterobacteria_phage	5.9e-88	57.0
WP_141960006.1\|4160162_4160504_-\|tail	phage tail protein	A0A0S2SYI2	Pseudomonas_phage	6.1e-16	42.0
WP_141960008.1\|4160578_4163023_-\|tail	phage tail tape measure protein	A0A1W6DXJ0	Citrobacter_phage	1.8e-85	30.3
WP_141960715.1\|4163078_4163312_-	hypothetical protein	I6PD79	Cronobacter_phage	1.4e-16	60.6
WP_019455561.1\|4163380_4163734_-	hypothetical protein	G8C7Q5	Escherichia_phage	5.0e-29	54.3
WP_019455562.1\|4163807_4164470_-\|tail	tail protein	I6PBN6	Cronobacter_phage	6.8e-72	64.5
WP_141960010.1\|4164596_4165106_-	hypothetical protein	NA	NA	NA	NA
WP_123892442.1\|4165272_4165641_-	antitermination protein Q	B6SCZ7	Bacteriophage	6.1e-30	56.7
WP_019455565.1\|4165814_4166486_+	hypothetical protein	U5P0T5	Shigella_phage	6.7e-83	67.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage