CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP041132	Serratia marcescens strain WVU-009 chromosome, complete genome	0 crisprs	DEDDh,DinG,csa3,cas3,WYL	0	0	8	0
NZ_CP041133	Serratia marcescens strain WVU-009 plasmid pWVU-009, complete sequence	0 crisprs	NA	0	0	0	1

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

516016 : 523518

Enterobacteria_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047569171.1\|516016_516271_-	transcriptional regulator	A0A2I8TV89	Erwinia_phage	5.2e-12	51.7
WP_142074953.1\|516267_516993_-	NAD-dependent aldehyde dehydrogenase	NA	NA	NA	NA
WP_142074955.1\|517535_517793_+	AlpA family phage regulatory protein	Q7M299	Enterobacteria_phage	1.1e-17	55.8
WP_142074957.1\|517789_518035_+	hypothetical protein	NA	NA	NA	NA
WP_142074960.1\|518040_518586_+	host cell division inhibitor Icd-like protein	A0A1W6JPK3	Morganella_phage	6.1e-10	39.0
WP_046688297.1\|518582_518846_+	hypothetical protein	NA	NA	NA	NA
WP_142074962.1\|518842_519178_+	DUF5375 family protein	NA	NA	NA	NA
WP_142074964.1\|519188_521537_+	DNA primase	Q7M2A8	Enterobacteria_phage	2.1e-261	59.9
WP_127146762.1\|522018_522927_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	8.5e-73	51.0
WP_016929262.1\|523284_523518_+	hypothetical protein	A0A192Y6D5	Salmonella_phage	4.9e-17	55.8

DBSCAN-SWA_2

828545 : 886444

Salmonella_phage(25.0%)

tail,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033641888.1\|828545_829592_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_089191195.1\|829569_830334_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	5.7e-54	46.3
WP_004932585.1\|830327_830954_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.3e-34	49.4
WP_071845092.1\|831261_832278_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	3.1e-07	37.5
WP_019455119.1\|832332_833331_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	1.2e-32	37.6
WP_033651712.1\|833410_835966_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.8e-27	20.0
WP_089191196.1\|836524_837142_-	cell filamentation protein Fic	NA	NA	NA	NA
WP_033644195.1\|837336_838221_-	hypothetical protein	NA	NA	NA	NA
WP_142075053.1\|838358_839330_-	aldo/keto reductase	NA	NA	NA	NA
WP_042785642.1\|839342_840101_-	glucose 1-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	5.5e-17	30.3
WP_123061396.1\|840249_841143_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004932561.1\|841560_841878_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_033641899.1\|841890_843252_+	PTS N,N'-diacetylchitobiose transporter subunit IIC	NA	NA	NA	NA
WP_142075055.1\|843295_844681_+	family 1 glycosylhydrolase	NA	NA	NA	NA
WP_004932550.1\|844696_845545_+	transcriptional regulator ChbR	NA	NA	NA	NA
WP_142075057.1\|845693_846455_+	chitin disaccharide deacetylase	NA	NA	NA	NA
WP_033641904.1\|846464_847844_-	MFS transporter	NA	NA	NA	NA
WP_033641905.1\|848087_848576_+	nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	1.0e-24	46.1
WP_004932541.1\|848687_849752_+	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	1.7e-112	61.9
WP_033641906.1\|849812_850328_+	recombination regulator RecX	NA	NA	NA	NA
WP_142075060.1\|850461_853089_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.1e-80	37.7
WP_004091602.1\|853341_853527_+	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	4.9e-12	66.7
WP_033641908.1\|854882_855449_+	fructose-1-phosphate/6-phosphogluconate phosphatase	NA	NA	NA	NA
WP_004932520.1\|855445_855874_+	DedA family protein	NA	NA	NA	NA
WP_046688257.1\|855956_857519_+	glutamate--cysteine ligase	NA	NA	NA	NA
WP_033641910.1\|857685_858201_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_016929024.1\|858266_859556_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_004932506.1\|859598_860390_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_004932504.1\|860559_861921_+	signal recognition particle protein	NA	NA	NA	NA
WP_004932501.1\|862135_862384_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_019455135.1\|862402_862951_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_046688258.1\|863003_863771_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_015376707.1\|863819_864176_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_033641912.1\|864319_864547_-	transcriptional regulator	Q37973	Salmonella_virus	4.6e-20	65.7
WP_069101122.1\|864636_865731_-	phage late control D family protein	Q6K1G4	Salmonella_virus	2.5e-103	49.7
WP_033641914.1\|865727_866201_-\|tail	phage tail protein	Q6K1G5	Salmonella_virus	8.1e-43	57.2
WP_142075062.1\|866223_868317_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	2.4e-14	45.5
WP_033641916.1\|868309_868432_-\|tail	GpE family phage tail protein	A0A0M4R2P3	Salmonella_phage	2.8e-08	74.3
WP_033641917.1\|868464_868752_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	3.0e-24	58.9
WP_033641919.1\|868816_869326_-\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	1.6e-65	69.0
WP_033641920.1\|869338_870508_-\|tail	phage tail sheath protein	F1BUU3	Erwinia_phage	5.8e-183	79.9
WP_050594401.1\|870648_871206_-\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	1.7e-28	39.6
WP_033641921.1\|871205_873083_-\|tail	tail fiber protein	A0A0M3ULH6	Salmonella_phage	1.0e-59	53.2
WP_069101124.1\|873079_876373_-\|tail	phage tail protein I	G5DEL7	Salmonella_phage	1.5e-273	48.8
WP_033641923.1\|876365_877274_-\|plate	baseplate assembly protein	A0A1J0I2M3	Salmonella_phage	1.5e-122	76.5
WP_033641924.1\|877278_877629_-\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	4.4e-38	67.2
WP_033641925.1\|877625_878261_-\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	3.2e-58	55.0
WP_033641926.1\|878346_878811_-\|tail	phage tail protein	F1BUP9	Erwinia_phage	1.7e-37	52.6
WP_142075064.1\|878864_879377_-	glycoside hydrolase family protein	A0A218M4K3	Erwinia_phage	8.7e-59	64.7
WP_033641928.1\|879360_879579_-	hypothetical protein	B6SD15	Bacteriophage	8.1e-06	50.9
WP_033641929.1\|879582_879786_-\|tail	tail protein X	F1BUQ5	Erwinia_phage	1.8e-20	68.7
WP_033641930.1\|879977_880172_-	hypothetical protein	NA	NA	NA	NA
WP_142075067.1\|880235_882332_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	1.7e-193	48.4
WP_142075069.1\|882315_882537_-	TraR/DksA family transcriptional regulator	A0A0M4S5Q7	Salmonella_phage	1.2e-12	55.1
WP_033641932.1\|882615_882921_-	hypothetical protein	NA	NA	NA	NA
WP_071845089.1\|883163_884060_+	phage repressor protein CI	Q6K1G0	Salmonella_virus	9.9e-82	53.1
WP_142075070.1\|884107_884872_-	DUF481 domain-containing protein	NA	NA	NA	NA
WP_033641934.1\|885367_886444_+	3-deoxy-7-phosphoheptulonate synthase	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	6.9e-90	50.9

DBSCAN-SWA_3

1706557 : 1784235

Erwinia_phage(32.61%)

head,protease,plate,capsid,terminase,portal,lysis,integrase,tail

attL 1696210:1696229|attR 1757699:1757718

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1696210:1696229	attL	NA	NA	NA	NA
WP_033642514.1\|1706557_1707070_+\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_142075271.1\|1707485_1708967_+	phospholipase	NA	NA	NA	NA
WP_046686750.1\|1708963_1709737_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_142075273.1\|1709825_1710599_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_060453234.1\|1710912_1711998_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4S6G4	Salmonella_phage	2.4e-114	59.7
WP_072270167.1\|1712115_1712685_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	6.4e-26	33.7
WP_072270972.1\|1712825_1713056_+	regulator	NA	NA	NA	NA
WP_060438900.1\|1713085_1713595_+	hypothetical protein	A0A1S6L008	Salmonella_phage	7.9e-44	53.0
WP_072010285.1\|1713605_1713785_+	DUF2724 domain-containing protein	F1BUS5	Erwinia_phage	1.1e-05	51.0
WP_060453213.1\|1713796_1714099_+	hypothetical protein	NA	NA	NA	NA
WP_060453214.1\|1714163_1714457_+	DUF2732 family protein	NA	NA	NA	NA
WP_060453215.1\|1714456_1714780_+	DUF5405 family protein	NA	NA	NA	NA
WP_142002183.1\|1714767_1714992_+	TraR/DksA family transcriptional regulator	Q6K1F5	Salmonella_virus	3.7e-14	56.9
WP_048321968.1\|1715114_1715396_+	DUF5405 family protein	A0A218M4I8	Erwinia_phage	4.5e-17	51.2
WP_142075275.1\|1715392_1717609_+	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	3.7e-239	57.7
WP_033644912.1\|1717647_1717872_+	hypothetical protein	NA	NA	NA	NA
WP_142002187.1\|1717919_1718117_+	hypothetical protein	NA	NA	NA	NA
WP_142003263.1\|1718250_1719135_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_142002189.1\|1719308_1720445_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_142002191.1\|1720622_1721816_+	MFS transporter	NA	NA	NA	NA
WP_071605322.1\|1722317_1722572_+	type II toxin-antitoxin system HicA family toxin	R4JMD3	Burkholderia_phage	5.9e-16	47.6
WP_033633573.1\|1722571_1722913_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_142002193.1\|1723082_1723625_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_142002195.1\|1723651_1724686_-\|portal	phage portal protein	F1BUR7	Erwinia_phage	2.0e-163	81.0
WP_142002197.1\|1724685_1726458_-\|terminase	terminase ATPase subunit family protein	F1BUR2	Erwinia_phage	3.3e-291	82.2
WP_142002198.1\|1726600_1727416_+\|capsid	GPO family capsid scaffolding protein	S4TP53	Salmonella_phage	4.6e-70	53.1
WP_128868863.1\|1727458_1728643_+\|capsid	phage major capsid protein, P2 family	F1BUQ8	Erwinia_phage	3.5e-159	78.6
WP_060436856.1\|1728645_1729305_+\|terminase	terminase endonuclease subunit	F1BUQ7	Erwinia_phage	1.7e-78	68.9
WP_128868864.1\|1729398_1729887_+\|head	head completion/stabilization protein	F1BUQ6	Erwinia_phage	1.6e-38	52.5
WP_015379118.1\|1729886_1730090_+	phage Tail protein X	A0A0F7LCN2	Escherichia_phage	2.4e-20	68.7
WP_015379117.1\|1730092_1730302_+	hypothetical protein	B6SD15	Bacteriophage	9.2e-07	48.2
WP_142002200.1\|1730285_1730798_+	glycoside hydrolase family protein	A0A218M4K3	Erwinia_phage	4.3e-58	67.1
WP_142002202.1\|1730794_1731223_+\|lysis	LysB family phage lysis regulatory protein	F1BUQ1	Erwinia_phage	2.1e-13	36.6
WP_142002204.1\|1731318_1731795_+\|tail	phage tail protein	F1BUP9	Erwinia_phage	6.9e-50	65.4
WP_043148046.1\|1731781_1732228_+	phage virion morphogenesis protein	O80313	Escherichia_phage	2.1e-40	59.1
WP_142002206.1\|1732300_1732930_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	1.3e-75	74.1
WP_142002208.1\|1732926_1733277_+\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	3.8e-37	66.4
WP_142002210.1\|1733281_1734190_+\|plate	baseplate assembly protein	A0A1J0I2M3	Salmonella_phage	5.3e-107	67.9
WP_142002212.1\|1734182_1734716_+\|tail	phage tail protein I	Q6K1H3	Salmonella_virus	5.7e-77	77.1
WP_142002214.1\|1734722_1737260_+	hypothetical protein	Q858V4	Yersinia_virus	9.3e-61	54.6
WP_060453274.1\|1737261_1737783_+\|tail	tail fiber assembly protein	F1BUK2	Cronobacter_phage	1.1e-35	45.9
WP_142002216.1\|1738059_1739229_+\|tail	phage tail sheath protein	F1BUU3	Erwinia_phage	2.8e-185	82.0
WP_060453186.1\|1739244_1739754_+\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	1.1e-69	75.6
WP_060418393.1\|1739807_1740089_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	1.4e-26	70.1
WP_023456045.1\|1740121_1740244_+\|tail	GpE family phage tail protein	Q6K1G8	Salmonella_virus	1.5e-09	72.5
WP_142075277.1\|1740236_1743083_+\|tail	phage tail tape measure protein	Q7Y4C8	Escherichia_virus	1.5e-112	41.6
WP_015379102.1\|1743087_1743573_+\|tail	phage tail protein	A0A0F7LDE8	Escherichia_phage	1.5e-47	65.7
WP_142002220.1\|1743569_1744718_+	phage late control D family protein	A0A218M4J7	Erwinia_phage	3.2e-125	63.4
WP_072265518.1\|1744817_1745036_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	3.2e-26	72.2
WP_004938680.1\|1745329_1747018_-	aspartate:alanine antiporter	NA	NA	NA	NA
WP_033642521.1\|1747312_1747702_+	membrane protein	NA	NA	NA	NA
WP_004938676.1\|1747741_1748005_-	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.7e-26	70.5
WP_033642522.1\|1748235_1748550_+	YbjC family protein	NA	NA	NA	NA
WP_033642523.1\|1748606_1749509_+	30S ribosomal protein S6--L-glutamate ligase	I3ULC9	Synechococcus_phage	9.4e-40	37.0
WP_004938666.1\|1749645_1750125_+	YbjN domain-containing protein	NA	NA	NA	NA
WP_033642524.1\|1750531_1751641_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_069100891.1\|1751761_1752895_+	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	7.2e-29	34.0
WP_042784087.1\|1752919_1753882_+	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_042784088.1\|1753878_1754724_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_047024958.1\|1754885_1755365_+	YbjO family protein	NA	NA	NA	NA
WP_122004040.1\|1755433_1756561_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	2.1e-28	26.8
WP_033633469.1\|1756557_1756842_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	1.0e-24	59.6
WP_004928423.1\|1756831_1757083_-	prevent-host-death protein	NA	NA	NA	NA
WP_015377297.1\|1757184_1757919_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
1757699:1757718	attR	NA	NA	NA	NA
WP_025302241.1\|1758119_1758788_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_025159684.1\|1758787_1759504_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_004928409.1\|1759513_1760245_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_089192582.1\|1760277_1761006_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.8e-28	35.8
WP_033642535.1\|1761270_1761813_-	lipoprotein	NA	NA	NA	NA
WP_004928400.1\|1761972_1762296_+	heavy metal-binding domain-containing protein	M4STD1	Rhodobacter_phage	2.9e-15	43.3
WP_033642536.1\|1762349_1763915_-	DUF3300 domain-containing protein	NA	NA	NA	NA
WP_123061544.1\|1764102_1764939_+	N-acetylmuramoyl-L-alanine amidase	A0A223VZK2	Agrobacterium_phage	1.1e-10	29.7
WP_069100885.1\|1764939_1765950_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_047572070.1\|1766108_1767548_-	DUF2867 domain-containing protein	NA	NA	NA	NA
WP_099783632.1\|1767698_1768046_+	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_101453223.1\|1768075_1769092_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_103101140.1\|1769167_1770889_-	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
WP_142075279.1\|1771088_1772090_-	NADH oxidoreductase	NA	NA	NA	NA
WP_033650659.1\|1772146_1773796_-	hydroxylamine reductase	NA	NA	NA	NA
WP_033642544.1\|1773976_1774873_-	lysine exporter LysO family protein	NA	NA	NA	NA
WP_033642546.1\|1775060_1776719_+	ATP-dependent endonuclease	NA	NA	NA	NA
WP_033642547.1\|1776733_1777687_-	DUF535 domain-containing protein	NA	NA	NA	NA
WP_033642548.1\|1777881_1778997_+	macrolide transporter subunit MacA	NA	NA	NA	NA
WP_033642549.1\|1778996_1780943_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	4.7e-36	37.3
WP_004928349.1\|1781030_1781252_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.1e-15	59.7
WP_004928347.1\|1781607_1781928_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	8.2e-15	42.7
WP_025302261.1\|1781955_1784235_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	8.7e-167	42.0

DBSCAN-SWA_4

2025917 : 2035260

Pectobacterium_phage(45.45%)

integrase

attL 2017967:2017981|attR 2031317:2031331

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2017967:2017981	attL	NA	NA	NA	NA
WP_142075340.1\|2025917_2027000_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	2.0e-97	49.6
WP_142075342.1\|2026974_2027316_-	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	2.2e-10	39.5
WP_142075343.1\|2027281_2027488_-	hypothetical protein	H9C154	Pectobacterium_phage	1.6e-08	52.4
WP_142075345.1\|2027756_2028257_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	2.3e-56	70.5
WP_142075347.1\|2028253_2030431_-	hypothetical protein	H9C157	Pectobacterium_phage	3.2e-126	39.7
WP_089194571.1\|2030482_2030761_-	hypothetical protein	NA	NA	NA	NA
WP_142075349.1\|2030771_2031089_-	hypothetical protein	NA	NA	NA	NA
WP_142075352.1\|2031615_2032071_-	helix-turn-helix domain-containing protein	A0A0U2QW76	Escherichia_phage	3.3e-33	49.7
2031317:2031331	attR	NA	NA	NA	NA
WP_142075354.1\|2032178_2032412_+	helix-turn-helix domain-containing protein	A0A0U2S629	Escherichia_phage	5.2e-11	47.2
WP_142075356.1\|2032473_2032926_+	hypothetical protein	H9C162	Pectobacterium_phage	3.7e-29	56.1
WP_047568246.1\|2032949_2033168_+	hypothetical protein	H9C163	Pectobacterium_phage	9.2e-18	59.4
WP_142075359.1\|2033170_2033890_+	helix-turn-helix domain-containing protein	A0A1W6JP36	Morganella_phage	1.3e-28	74.2
WP_142075360.1\|2033886_2035260_+	replicative DNA helicase	Q76H51	Enterobacteria_phage	2.1e-115	49.7

DBSCAN-SWA_5

2038420 : 2070554

Edwardsiella_phage(24.24%)

head,terminase,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_142075371.1\|2038420_2039014_+	DUF1367 family protein	H9C173	Pectobacterium_phage	2.0e-75	67.0
WP_142075373.1\|2039010_2039295_+	DUF1364 family protein	A0A088CE53	Shigella_phage	4.4e-36	75.5
WP_142075375.1\|2039294_2039693_+	antitermination protein Q	B6SCY2	Bacteriophage	2.9e-33	57.5
WP_142076247.1\|2041005_2041449_+	PACE efflux transporter	NA	NA	NA	NA
WP_142075377.1\|2041563_2041827_+\|lysis	lysis protein	Q7Y3V4	Yersinia_phage	1.2e-19	51.7
WP_142075379.1\|2041826_2042357_+	glycoside hydrolase family protein	H9C184	Pectobacterium_phage	2.4e-83	83.4
WP_142075380.1\|2042353_2042734_+	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_142076249.1\|2042714_2042894_+	hypothetical protein	NA	NA	NA	NA
WP_142075382.1\|2043641_2044664_+\|terminase	terminase small subunit	A0A1Y0SUQ3	Pseudomonas_phage	1.3e-40	41.8
WP_142076251.1\|2044884_2045352_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_142075384.1\|2045441_2047061_+	TerL protein	A9YWZ6	Burkholderia_phage	1.5e-234	74.0
WP_142075386.1\|2047060_2048611_+	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	3.4e-98	43.4
WP_142076253.1\|2048651_2049335_+\|head	phage head morphogenesis protein	H9C0V1	Aeromonas_phage	3.2e-56	49.6
WP_060419454.1\|2049338_2050664_+	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	4.7e-72	41.2
WP_038875760.1\|2050665_2051148_+	hypothetical protein	E2GLV4	Acinetobacter_phage	3.0e-29	51.5
WP_142075388.1\|2051147_2052176_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	1.0e-82	49.4
WP_142075390.1\|2052179_2052524_+	hypothetical protein	A0A1X9SFA9	Acinetobacter_phage	2.8e-13	39.6
WP_038875751.1\|2052527_2052998_+	DUF4054 domain-containing protein	K4HYQ8	Acinetobacter_phage	4.8e-11	37.0
WP_142075392.1\|2052998_2053478_+	hypothetical protein	I6ZXX4	Escherichia_phage	2.9e-08	30.5
WP_142075393.1\|2053474_2053840_+	hypothetical protein	NA	NA	NA	NA
WP_060419446.1\|2053824_2054376_+	hypothetical protein	NA	NA	NA	NA
WP_142075395.1\|2054356_2055841_+	DUF3383 family protein	A0A077KGV4	Edwardsiella_phage	3.0e-91	38.2
WP_038875737.1\|2055840_2056278_+	hypothetical protein	A0A077K9T0	Edwardsiella_phage	2.3e-20	38.1
WP_110157888.1\|2056277_2056682_+	hypothetical protein	H9C0W7	Aeromonas_phage	4.1e-19	44.5
WP_047730619.1\|2056684_2056891_+	hypothetical protein	NA	NA	NA	NA
WP_142076255.1\|2056896_2058783_+	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	1.2e-49	40.4
WP_142075397.1\|2058779_2059586_+	hypothetical protein	A0A077KGW3	Edwardsiella_phage	1.3e-27	37.4
WP_047730622.1\|2059585_2059888_+	hypothetical protein	A0A077K9U4	Edwardsiella_phage	1.3e-25	52.5
WP_142075398.1\|2059884_2060730_+	hypothetical protein	A0A077KC17	Edwardsiella_phage	5.5e-34	32.2
WP_142075400.1\|2060731_2061418_+	oxidoreductase	A0A077KAY0	Edwardsiella_phage	5.5e-32	36.3
WP_038875867.1\|2061417_2061774_+	hypothetical protein	A0A077KCA1	Edwardsiella_phage	9.1e-23	50.0
WP_060424826.1\|2061770_2063018_+	hypothetical protein	A0A077KGW9	Edwardsiella_phage	7.7e-101	50.2
WP_089191830.1\|2063019_2063607_+	DUF2612 domain-containing protein	A0A2R3UAM9	Myoviridae_environmental_samples	2.7e-35	38.7
WP_142075402.1\|2063608_2065120_+	hypothetical protein	H9C0Y2	Aeromonas_phage	5.8e-26	52.4
WP_122004116.1\|2065122_2065680_+	hypothetical protein	A0A0C4UQZ5	Shigella_phage	8.7e-28	39.3
WP_142076257.1\|2065693_2067136_-	hypothetical protein	A8CG94	Salmonella_phage	3.4e-15	22.9
WP_060447306.1\|2067149_2068061_-	glycosyltransferase family 2 protein	M1FQW5	Enterobacteria_phage	4.6e-135	76.9
WP_072271515.1\|2068057_2068414_-	GtrA family protein	B9UDL8	Salmonella_phage	3.1e-31	57.1
WP_033637997.1\|2068863_2069286_+	translesion error-prone DNA polymerase V autoproteolytic subunit	F1C5A6	Cronobacter_phage	3.0e-33	55.0
WP_060447304.1\|2069285_2070554_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	6.7e-177	71.5

DBSCAN-SWA_6

2206083 : 2248145

Moraxella_phage(25.0%)

protease,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_142075435.1\|2206083_2207502_+\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_033642834.1\|2207648_2207858_-	hypothetical protein	NA	NA	NA	NA
WP_033638276.1\|2208637_2209030_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_046686935.1\|2209034_2209634_+	hypothetical protein	NA	NA	NA	NA
WP_033642836.1\|2209689_2209929_-	YebV family protein	NA	NA	NA	NA
WP_142076261.1\|2210064_2210997_-	fimbrial major subunit CsuA/B family protein	NA	NA	NA	NA
WP_142076263.1\|2211016_2213359_-	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_046686936.1\|2213510_2214278_-	molecular chaperone	NA	NA	NA	NA
WP_033642838.1\|2214298_2214841_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_033642839.1\|2214834_2215338_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_033642840.1\|2215340_2215877_-	fimbrial major subunit CsuA/B family protein	NA	NA	NA	NA
WP_033652487.1\|2216150_2216687_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_142075437.1\|2216952_2218389_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_142075439.1\|2218491_2221122_-	MCE family protein	NA	NA	NA	NA
WP_142075441.1\|2221090_2222338_-	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_033642843.1\|2222593_2223091_+	GAF domain-containing protein	NA	NA	NA	NA
WP_004931497.1\|2223187_2223898_+	RNA chaperone ProQ	NA	NA	NA	NA
WP_033642845.1\|2223917_2225966_+	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	1.5e-85	33.9
WP_033642846.1\|2226033_2226879_-	DMT family transporter	NA	NA	NA	NA
WP_142075443.1\|2226875_2228183_-	opine metallophore biosynthesis dehydrogenase	NA	NA	NA	NA
WP_033642848.1\|2228175_2228973_-	nicotianamine synthase	NA	NA	NA	NA
WP_004931489.1\|2228960_2229746_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.2e-10	28.4
WP_052133798.1\|2229742_2230783_-	iron ABC transporter permease	NA	NA	NA	NA
WP_046686943.1\|2230785_2231877_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_033652481.1\|2232245_2233124_+\|protease	protease HtpX	NA	NA	NA	NA
WP_142075445.1\|2233462_2234170_+	hypothetical protein	NA	NA	NA	NA
WP_033642854.1\|2234274_2235669_-	MFS transporter	NA	NA	NA	NA
WP_033642855.1\|2235899_2236691_+	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_142075447.1\|2236736_2237540_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_142075449.1\|2237542_2238406_-	2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA
WP_139120318.1\|2238407_2239544_-	2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT	G3M9Y6	Bacillus_virus	9.7e-26	33.7
WP_089196976.1\|2239540_2240551_-	2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_069100110.1\|2240728_2241448_-	phosphonate utilization transcriptional regulator PhnR	NA	NA	NA	NA
WP_033652472.1\|2241600_2242704_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_047576043.1\|2242713_2243523_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_089194670.1\|2243586_2244984_-	L-cystine transporter	NA	NA	NA	NA
WP_033642861.1\|2245164_2245713_-	metal-dependent hydrolase	A0A127AVX7	Bacillus_phage	8.3e-07	35.8
WP_033652469.1\|2246134_2246800_-	hexitol phosphatase HxpB	NA	NA	NA	NA
WP_046686946.1\|2246864_2248145_-\|protease	protease	NA	NA	NA	NA

DBSCAN-SWA_7

3819689 : 3826783

Salmonella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033644018.1\|3819689_3820043_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.6e-19	47.0
WP_033644019.1\|3820243_3820474_+	hypothetical protein	J9Q735	Salmonella_phage	4.2e-13	50.7
WP_142075867.1\|3820487_3821027_+	DNA-binding protein	J9Q7G7	Salmonella_phage	3.4e-45	56.0
WP_025159568.1\|3821040_3821742_-	DnaA inactivator Hda	NA	NA	NA	NA
WP_142075869.1\|3822014_3822530_+	E3 ubiquitin--protein ligase	NA	NA	NA	NA
WP_016926728.1\|3822563_3822812_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_033651534.1\|3822859_3824149_-	uracil permease	Q9KX94	Enterobacteria_phage	6.0e-64	38.2
WP_004941642.1\|3824225_3824852_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_025303843.1\|3825107_3826145_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	3.8e-69	41.9
WP_033644022.1\|3826144_3826783_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	3.2e-26	39.2

DBSCAN-SWA_8

4601580 : 4642201

Erwinia_phage(41.46%)

head,plate,capsid,terminase,portal,tRNA,lysis,integrase,tail

attL 4595452:4595472|attR 4648578:4648598

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4595452:4595472	attL	NA	NA	NA	NA
WP_004937199.1\|4601580_4602594_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	5.7e-110	59.5
WP_001144069.1\|4602919_4603135_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_019453084.1\|4603271_4605020_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	8.7e-74	38.8
WP_025304326.1\|4605177_4607019_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.9e-34	33.3
WP_060660225.1\|4607074_4607527_-	polyketide cyclase	NA	NA	NA	NA
WP_033644588.1\|4607543_4608032_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_033644586.1\|4608454_4608685_-	DNA-binding transcriptional regulator	Q37973	Salmonella_virus	9.4e-21	64.5
WP_141972498.1\|4608768_4609929_-	phage late control D family protein	A0A218M4J7	Erwinia_phage	8.4e-126	63.6
WP_015379102.1\|4609925_4610411_-\|tail	phage tail protein	A0A0F7LDE8	Escherichia_phage	1.5e-47	65.7
WP_141972496.1\|4610415_4613262_-\|tail	phage tail tape measure protein	Q7Y4C8	Escherichia_virus	2.8e-106	37.5
WP_023456045.1\|4613254_4613377_-\|tail	GpE family phage tail protein	Q6K1G8	Salmonella_virus	1.5e-09	72.5
WP_060418393.1\|4613409_4613691_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	1.4e-26	70.1
WP_023447563.1\|4613745_4614255_-\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	1.7e-70	76.2
WP_141972494.1\|4614270_4615440_-\|tail	phage tail sheath protein	F1BUU3	Erwinia_phage	1.8e-184	82.0
WP_141972492.1\|4615713_4616235_-\|tail	tail fiber assembly protein	F1BUK2	Cronobacter_phage	2.1e-36	46.2
WP_142076083.1\|4616236_4618774_-	hypothetical protein	Q858V4	Yersinia_virus	6.1e-60	53.7
WP_015379109.1\|4618780_4619314_-\|tail	phage tail protein I	Q858V5	Yersinia_virus	4.3e-77	76.6
WP_142076085.1\|4619306_4620215_-\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	7.3e-109	69.2
WP_033639346.1\|4620219_4620570_-\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	6.4e-37	66.4
WP_141972486.1\|4620566_4621196_-\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	4.1e-74	73.1
WP_141972484.1\|4621270_4622020_-	hypothetical protein	NA	NA	NA	NA
WP_141972482.1\|4622103_4622550_-	phage virion morphogenesis protein	O80313	Escherichia_phage	2.1e-40	59.1
WP_142076087.1\|4622536_4623013_-\|tail	phage tail protein	F1BUP9	Erwinia_phage	3.1e-50	64.7
WP_015379115.1\|4623108_4623537_-\|lysis	LysB family phage lysis regulatory protein	F1BUQ1	Erwinia_phage	5.5e-14	36.6
WP_141972478.1\|4623533_4624046_-	glycoside hydrolase family protein	A0A218M4K3	Erwinia_phage	3.3e-58	66.5
WP_015379117.1\|4624029_4624239_-	hypothetical protein	B6SD15	Bacteriophage	9.2e-07	48.2
WP_141972476.1\|4624241_4624445_-\|tail	phage tail protein	A0A0F7LCN2	Escherichia_phage	9.2e-20	67.2
WP_102984937.1\|4624444_4624933_-\|head	head completion/stabilization protein	F1BUQ6	Erwinia_phage	3.3e-39	53.7
WP_060436856.1\|4625026_4625686_-\|terminase	terminase endonuclease subunit	F1BUQ7	Erwinia_phage	1.7e-78	68.9
WP_060453263.1\|4625688_4626873_-\|capsid	phage major capsid protein, P2 family	F1BUQ8	Erwinia_phage	1.6e-159	78.9
WP_122078038.1\|4626915_4627731_-\|capsid	GPO family capsid scaffolding protein	S4TP53	Salmonella_phage	6.4e-72	53.5
WP_142076090.1\|4627873_4629646_+\|terminase	terminase ATPase subunit family protein	F1BUR2	Erwinia_phage	9.7e-291	81.9
WP_142076092.1\|4629645_4630680_+\|portal	phage portal protein	F1BUR7	Erwinia_phage	9.1e-164	81.0
WP_033633573.1\|4630724_4631066_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_071605322.1\|4631065_4631320_-	type II toxin-antitoxin system HicA family toxin	R4JMD3	Burkholderia_phage	5.9e-16	47.6
WP_142076094.1\|4631780_4632044_-	hypothetical protein	A0A1L2CUJ8	Pectobacterium_phage	1.5e-25	71.2
WP_142076096.1\|4632190_4632517_+	killer suppression protein HigA	NA	NA	NA	NA
WP_142076098.1\|4632513_4633596_+	ImmA/IrrE family metallo-endopeptidase	A0A075BTZ7	Microcystis_phage	9.6e-07	34.2
WP_142076100.1\|4633599_4634544_-	hypothetical protein	NA	NA	NA	NA
WP_142076102.1\|4634540_4635521_-	thymidylate synthase	A0A218MKK4	uncultured_virus	2.4e-20	30.0
WP_142076104.1\|4635793_4636018_-	hypothetical protein	NA	NA	NA	NA
WP_142076106.1\|4636056_4638273_-	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	3.7e-239	57.7
WP_141972461.1\|4638269_4638551_-	DUF5405 family protein	A0A218M4I8	Erwinia_phage	5.9e-17	50.0
WP_060426813.1\|4638673_4638898_-	hypothetical protein	Q6K1F5	Salmonella_virus	3.7e-14	56.9
WP_141972459.1\|4638897_4639140_-	DUF2732 family protein	E5G6L6	Salmonella_phage	2.8e-07	48.5
WP_031221632.1\|4639203_4639506_-	hypothetical protein	NA	NA	NA	NA
WP_048322123.1\|4639517_4639697_-	DUF2724 domain-containing protein	F1BUS5	Erwinia_phage	1.1e-05	51.0
WP_128868617.1\|4639707_4640217_-	hypothetical protein	A0A1S6L008	Salmonella_phage	7.1e-45	53.6
WP_033644552.1\|4640247_4640469_-	hypothetical protein	NA	NA	NA	NA
WP_128868618.1\|4640578_4641163_+	phage repressor protein CI	F1BUS8	Erwinia_phage	1.7e-29	40.8
WP_141972457.1\|4641166_4642201_+\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	8.6e-122	62.3
4648578:4648598	attR	NA	NA	NA	NA