CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP019720	Streptococcus mutans strain NBRC 13955	2 crisprs	DEDDh,cas3,WYL,cas5,cas8c,cas7,cas4,cas2,csa3,cas9,cas1,csn2,DinG,csm6	0	7	3	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP019720_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019720_1

412076-412569

TypeI

I-C

Consensus_repeat	Method
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	PILER-CR
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CRISPRCasFinder
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	CRT

7 spacers

cas2,cas4,cas7,cas8c,cas5,cas3,WYL

The CRISPR arrays of NZ_AP019720_1

>merge|NZ_AP019720|1|412076-412569|PILER-CR,CRISPRCasFinder,CRT
GTCGCACCCTTCACGGGTGCGTGGATTGAAATTGCATTTGTTAGTTGATTATCTCGACCTGTCCCAGTCGCACCCTTCACGGGTGCGTGGATTGAAATAATTTGAAATGTCTATCCAATCAGAAGATTTATCAGTCGCACCCTTCACGGGTGCGTGGATTGAAATTACAGTGCGACTGACTGCAGTAATAAACACTAAGTCGCACCCTTCACGGGTGCGTGGATTGAAATAGAGCTCGAAAAGAGCATAACTAACCCAACAACAAGTCGCACCCTTCACGGGTGCGTGGATTGAAATACTGAAAAAGAATTACCAAGCAGTAATCATTGAGTCGCACCCTTCACGGGTGCGTGGATTGAAATAAGATGGCTGGAATATGAAGGAGAGGTAGAAAGGTCGCACCCTTCACGGGTGCGTGGATTGAAATTTCAAAAAATCCTGAAATAAACACTTCTGGTTTTTGTCGCACCCTTTAAAGGTTGGGTTTGTTTTTT

>NZ_AP019720|1|1|412076-412502|PILER-CR
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGCATTTGTTAGTTGATTATCTCGACCTGTCCCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATTTGAAATGTCTATCCAATCAGAAGATTTATCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TACAGTGCGACTGACTGCAGTAATAAACACTAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AGAGCTCGAAAAGAGCATAACTAACCCAACAACAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ACTGAAAAAGAATTACCAAGCAGTAATCATTGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AAGATGGCTGGAATATGAAGGAGAGGTAGAAAG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT

>NZ_AP019720|1|1|412076-412502|CRISPRCasFinder
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGCATTTGTTAGTTGATTATCTCGACCTGTCCCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATTTGAAATGTCTATCCAATCAGAAGATTTATCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TACAGTGCGACTGACTGCAGTAATAAACACTAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AGAGCTCGAAAAGAGCATAACTAACCCAACAACAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ACTGAAAAAGAATTACCAAGCAGTAATCATTGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AAGATGGCTGGAATATGAAGGAGAGGTAGAAAG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT

>NZ_AP019720|1|1|412076-412569|CRT
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TGCATTTGTTAGTTGATTATCTCGACCTGTCCCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AATTTGAAATGTCTATCCAATCAGAAGATTTATCA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TACAGTGCGACTGACTGCAGTAATAAACACTAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AGAGCTCGAAAAGAGCATAACTAACCCAACAACAA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	ACTGAAAAAGAATTACCAAGCAGTAATCATTGA
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	AAGATGGCTGGAATATGAAGGAGAGGTAGAAAG
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT	TTCAAAAAATCCTGAAATAAACACTTCTGGTTTTT
GTCGCACCCTTTAAAGGTTGGGTTTGTTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019720.1\|WP_002263670.1\|402120_402366_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350305
NZ_AP019720.1\|WP_002280401.1\|398453_401105_+\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_AP019720.1\|WP_002262531.1\|423742_424177_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_AP019720.1\|WP_002262530.1\|422621_423413_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|180910
NZ_AP019720.1\|WP_002280165.1\|420358_421717_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|236364
NZ_AP019720.1\|WP_002262533.1\|425213_425438_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_AP019720.1\|WP_002268387.1\|407120_409052_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|273839
NZ_AP019720.1\|WP_002263669.1\|402649_403624_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_AP019720.1\|WP_002266866.1\|424176_425154_+\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|236475
NZ_AP019720.1\|WP_002262529.1\|421815_422460_+\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|223710
NZ_AP019720.1\|WP_002263664.1\|411634_411928_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_AP019720.1\|WP_002263667.1\|406377_407121_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_AP019720.1\|WP_002262537.1\|428226_429459_+\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|235987
NZ_AP019720.1\|WP_002262534.1\|425540_426506_+\|enoyl-[acyl-carrier-protein]-reductase-FabK	unknown	unknown	gnl\|CDD\|132195
NZ_AP019720.1\|WP_002268386.1\|409055_409931_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|274216
NZ_AP019720.1\|WP_002280402.1\|403868_406277_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_AP019720.1\|WP_002280166.1\|426508_427429_+\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_AP019720.1\|WP_002280167.1\|427443_428178_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_AP019720.1\|WP_002263665.1\|409932_410604_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|224385
NZ_AP019720.1\|WP_002263672.1\|401676_401982_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225215

Protein	Function_ID	Function_description	E-value
NZ_AP019720.1\|WP_002263670.1\|402120_402366_+\|hypothetical-protein	gnl\|CDD\|350305	cd18738, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	5.90037e-05
NZ_AP019720.1\|WP_002280401.1\|398453_401105_+\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_AP019720.1\|WP_002262531.1\|423742_424177_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.10415e-16
NZ_AP019720.1\|WP_002262530.1\|422621_423413_+\|enoyl-CoA-hydratase	gnl\|CDD\|180910	PRK07260, PRK07260, enoyl-CoA hydratase; Provisional.	4.69772e-179
NZ_AP019720.1\|WP_002280165.1\|420358_421717_-\|aspartate-kinase	gnl\|CDD\|236364	PRK09034, PRK09034, aspartate kinase; Reviewed.	0
NZ_AP019720.1\|WP_002262533.1\|425213_425438_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	8.86201e-18
NZ_AP019720.1\|WP_002268387.1\|407120_409052_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|273839	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein that tends to be found near CRISPR repeats of the DVULG subtype of CRISPR/Cas locus. We designate this family Csd1 (CRISPR/Cas Subtype DVULG protein 1). The species range for this subtype, so far, is exclusively bacterial and mesophilic, although CRISPR loci in general are particularly common among archaea and thermophilic bacteria. In a few species (Xanthomonas axonopodis pv. citri str. 306 and Streptococcus mutans UA159), homology to this protein family is split across two tandem genes; the trusted cutoff to this family is set low enough to capture at least the longer of the two.	3.77682e-102
NZ_AP019720.1\|WP_002263669.1\|402649_403624_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	3.83777e-14
NZ_AP019720.1\|WP_002266866.1\|424176_425154_+\|ketoacyl-ACP-synthase-III	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	7.93648e-174
NZ_AP019720.1\|WP_002262529.1\|421815_422460_+\|HAD-family-phosphatase	gnl\|CDD\|223710	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only].	3.20316e-45
NZ_AP019720.1\|WP_002263664.1\|411634_411928_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.51524e-31
NZ_AP019720.1\|WP_002263667.1\|406377_407121_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.21553e-102
NZ_AP019720.1\|WP_002262537.1\|428226_429459_+\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|235987	PRK07314, PRK07314, beta-ketoacyl-ACP synthase II.	0
NZ_AP019720.1\|WP_002262534.1\|425540_426506_+\|enoyl-[acyl-carrier-protein]-reductase-FabK	gnl\|CDD\|132195	TIGR03151, enACPred_II, putative enoyl-[acyl-carrier-protein] reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.	5.13667e-168
NZ_AP019720.1\|WP_002268386.1\|409055_409931_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|274216	TIGR02589, conserved_hypothetical_protein, CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csd2 protein of the Dvulg subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02590, the Csh2 protein of the Hmari CRISPR subtype.	1.35245e-147
NZ_AP019720.1\|WP_002280402.1\|403868_406277_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	6.29954e-98
NZ_AP019720.1\|WP_002280166.1\|426508_427429_+\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	4.78843e-126
NZ_AP019720.1\|WP_002280167.1\|427443_428178_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	8.73214e-127
NZ_AP019720.1\|WP_002263665.1\|409932_410604_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	7.3791e-30
NZ_AP019720.1\|WP_002263672.1\|401676_401982_+\|hypothetical-protein	gnl\|CDD\|225215	COG2336, MazE, Growth regulator [Signal transduction mechanisms].	1.3401e-07

>NZ_AP019720.1|WP_002263664.1|411634_411928_+|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTETVAGRKRLRHVAKLCVDYGQRVQHSVFECSVTPAEFVEIKNELSTIIDQESDSIRFYLLGKNWQNRVETMGRDDSYDPDVGILLL
>NZ_AP019720.1|WP_002263665.1|409932_410604_+|CRISPR-associated-protein-Cas4
MAYAEDDYLMLSGIQHFQFCKRQWGLIHIEQQWAENEATAHGQILHQKADNPYIREKRKDIITSRAMHVSSKTLGLYGILDVVEFHKDKNGVTLKGKRGKWLPRIVEYKRGKPKRDTRDIVQLVAQTICLEETFGCPIETGCLYYHSVNQKKVIEITEALRQEVFDLAGQMHYYYDNKIIDKAEYFKNCPLCSLVDICKPRLSKKSRNVANYIKRHVMSEESL
>NZ_AP019720.1|WP_002268386.1|409055_409931_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MLEQKIDFMVTVEVREANANGDPLSGNMPRTDAKDYGLMSDVSIKRKIRNRMQDMGQPIFVQARDRVDDCIYSLKQRLENKEFFDTVKEGSKKKKSVENFVKQINAEWLDVRSFGQVFAFDGYSAANVRGPVSISWAKSLEKVVTQSMQITKSTNSELNSKTELESSTMGTKHFVDYGVYVIKGSINPNFAEKTGFSDADAEIIKEVLVSLFENDASSARPEGSMRVREVFWFTHSNKLGNVSSARVFDLLEFDKEKQDKDSYEDYAIHLNQEELAEYEAKGLQVEIIEGL
>NZ_AP019720.1|WP_002268387.1|407120_409052_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDLFTSLLKAYEKAEEIGLVDQQTGDNPVLLPIYHDNKVIKNNDIYIEILLDNEGAFYKARKFEIGENVIFPVTYESSNRTSTKIAPHPIVDSWYYVMYSELRKEKHQRYLQNLDNWIIQTENNKVENFLKIIKKFVENPESVELVLNSAFGSDCQIQEEFVDNNGKIQEGSLIFGEKKQKIALKDIKLSFKILEFDGLRDVSVSNFNEMHHDFINYINNNSTEIGIGICNISGKEDRIIKNHRKPKGVFSNGKLISQNNKIAYLGDRFPNENASSDIIKIGYETSEKIHLMIKYLLENNNSHTWLGTSQYLINWFSDDLSNDSQLDIVKPEFDDLFEDDEEEKQVFIKPNEENKKIGSSFVRGQKLFSNNATYNIAILNENKGRIALKYFRQLQVSQLLKNLESWQENYSWEAKTKAGNYELKKTPTFNEIINAAYGVDRERYLELDNDSFRSDQYQQLVTALIDGKPLPNTIVKKLEDNIRQRQKYSKHWYQVQQVSLAVLQKQYGREFTPMLDHQETDRSYLFGRLLAIYELFEAQRYALDGSSQERVTNAERYWNAYTGQPAKMMTHLENKIKPYEEVLKLNKPGIWHKLEKERKEIIQLMTPMYAHKNFTQSLDYKFIFGYYAEKQFYYTKQAKENEE
>NZ_AP019720.1|WP_002263667.1|406377_407121_+|type-I-C-CRISPR-associated-protein-Cas5
MYRSRNFYARIRGDRALFTNPATKGGSERSSYSVPTRQALQGIIDGIYHKPTFTNVITEVKVVNQIQTELHGVRALLHDYSADLSYVSYLSDVEYLVKFHFIWNENREDLIQDRLPKKHEAIMERSIRKGGRRDIFLGTRECFGLVDEISQEEYETIPSYYNGVTIDLGIMFHSFAYPTSKDTPLKSYFTKTVMENGAIKFKPQSECEIVNTLSSYAFKSLGQLKSVDDEYVDDEYEEYEAMEKGEG
>NZ_AP019720.1|WP_002280402.1|403868_406277_+|CRISPR-associated-helicase/endonuclease-Cas3
MKMKLAHKNNTGEEQSLEDHSFNVANKAREDAEFIGQGDLLFLLGMFHDLGKADEKFQNKLTKNPTMHVDHAYAGAKYLYEKIKIRLSAKGVDKATRLQFNEIVAYVIAAHHGMFDIVDLESEQHAYNKLRNRIARPKSDYHFDSDVTNFANFLETKLEHYGYQDLGMLIDKSFENYQQALSKLDCQDSSEEVYYQSCFVRLYLSLLKNADILDTINAYGLLINPLKQEEKIRLNRSYLEAIEKKYGEFGSPTTRLNEIRSQIAERVKSRGESDSTGIYRLDLPTGAGKTNLSMRYAFHQLVDQDRSRFFYITPFLSVLEQNAAAIKKVIGEDGVLEHHSNVVQNKQENEDKGDEKESLLPEYLIESWDSPVVLTSMVQFFQTLFKTKSANIRRFSSLANSVLILDEVQSLPIEVTALFNLTMNFLNKVMNTTIILCTATQPAYDSTAIKHKLSYGGKYGEATDMVELTHDEKEVFSRTELRKFDETNQNSKLSDLVDFVLENDESILVIFNTKKTVDRFYSLLEKLTDRPIYQLSTNMCAQHRLDIISEIKQGLEDGLPLICISTQLIEAGVDVDFNHVIRSYAGIDSIVQASGRCNREGKRDKGQVTLINLTSEEENISPLKEIKAKKDATEYILHKISSPIDTSLLNRDFFEYYYANNQGSMDYPLEHDGESVYDYLSVNFYQKKVGFKGKLKQAFKTAGLKMNLINNETIGILVPYRDAAEKLLILEELCKSDYPSEEDYRAIKALLKELQSYTVNVREHNQILEATKPYLNGQIQILSDSYYDDKKGITLESASFLM
>NZ_AP019720.1|WP_002263669.1|402649_403624_+|WYL-domain-containing-protein
MAESKTKRLLYFMSELEKGNQINKEEYIAKFNISDRTMKEDVSELKTNLKELRPNMQIKFSRKHACYFASYEQGYGNLKYNQAVILSKILLESRALRKEEVAEIINIFVERAVDDKERTRIKKLTQFELNSYQELKFYQKSNKSILPTISAIFDAIVDQRPLAFSYTKPSSKVEEYIVLPISVIFDNHYFYCISYKLDNCFQSRYELQELRYFRVDRFKTIHKSISNSAFALTEEEQERLITDEQVRYQTFSMLSDQKWVRIQFRYTGQFRDVLEADIPKLKMINELEEGIIYEIETLSLLGFQKYIQRFDGDFVFLNIKSIKK
>NZ_AP019720.1|WP_002263670.1|402120_402366_+|hypothetical-protein
MGKIARLELEKLVKIFQVLDVTKENCLQALSMKMPDFEGAVVAAVALSNDINIVVTRNVTDFQDSELIIYLPEEFLERLKR
>NZ_AP019720.1|WP_002263672.1|401676_401982_+|hypothetical-protein
MAVLLEQDRIQLKKWGNSNAFRIPQKLLKSLKFEPDQEFTIKAVDLGGHKQLVIEPLVSQNDQLSLIESLSGILSDSETVDVKDYRSERKEERLKKYESLT
>NZ_AP019720.1|WP_002280401.1|398453_401105_+|valine--tRNA-ligase
MSTQLSPKYNPAEVEAGRYQKWLDADVFKPSGDQKAKPYSIVIPPPNVTGKLHLGHAWDTTLPDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLAEDGISRYDLGREKFLDKVWEWKDEYAATIKEQWGKMGISVDYSRERFTLDEGLSKAVRKVFVELYKKGWIYRGEFIINWDPKARTALSDIEVIHKDVEGAFYHMNYMLEDGSRALEVATTRPETMFGDTAVAVNPNDDRYKDLIGQNVILPIVNKLIPIVADEHADPEFGTGVVKITPAHDPNDFLVGQRHNLPQVNVMNDDGTMNELAGEFAGMDRFEARKATVKKLEEIGALVEIEKMTHSVGHSERTGVPIEPRLSTQWFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYNADGDMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDTDSEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVVDKYGADALRWFLSNGSAPGQDVRFSYEKMDAAWNFINKIWNISRYILMNNEGLSLDQASKNVVLVTNGKAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKEVLYSEDEAEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFGQYADGSIVTAAYPTVNPAFENQTAHSGVESLKDLIRAVRNARAEVNVAPSKPITILVKTSDSNLEDFFKANVNYIKRFTNPETLEISSAIATPELAMSAVITGAEIFLPLADLLNVEEELARLNKELAKWQKELDIVAKKLSNDRFVQNAKPEIVQKERDKQIDYQTKYDATVERIKEMEKLIK
>NZ_AP019720.1|WP_002280165.1|420358_421717_-|aspartate-kinase
MKVVKFGGSSLASATQLEKVLNIIKSDEERRFVVVSAPGKRDAQDTKVTDALIRYYRSYTSDKDVTADQSWIINRYRAIIDELGLGQNILEKITKAIVDLANLPIEDNDFLYDTFLAAGEDNNAKLIAEYFRKNGLSARYIHPKKAGIIVTSEPGNARIIPSSYDKLEELRDSDEVLVIPGFFGVTIDNQICTFSRGGSDITGSIVAAGVKADLYENFTDVDGIFAAHPGVVHKPHSISELTYREMRELAYAGFSVLHDEALIPAYRGKIPLVIKNTNNPEHSGTKIVLAHTGATIPVVGIAGDDDFVSINLSKYLMNREIGFGRKVLQVLEELNIRWEHIPTGIDDMSIILRGRELTPIKEQEIISQLTRKLEVDEVEIERNLSIIMIVGENMKNHIGVTAKAAEAFSKKHINLEMISQGSSEVSVMFVIKTEQEKQAVRALYQTFFMKDE
>NZ_AP019720.1|WP_002262529.1|421815_422460_+|HAD-family-phosphatase
MATKAVIFDMDGVLFDTEGFYYRRREIFLNDKGISIKHIPPAFFIGGNMKQVWQKILEDDYANWDVEQLQKDYTSYKNKHPLPYQNLIFPDVKVILEKLKQHQFKIALASSSTKSDILLALNKTGIYDYFDLVLSGEEFPESKPHPAIYNEAAYQLGFPKSELLIIEDSEKGIAAGVSAGIEVWAIKDRTFGLNQRAASRLFSNLTEVVDFLLK
>NZ_AP019720.1|WP_002262530.1|422621_423413_+|enoyl-CoA-hydratase
MDFKEILYNVDNGVATLTLNRPEVSNGFNIPICEEILKAIDIAKKDDTVQILLINANGKVFSVGGDLVEMQRAVDADDVQSLVRIAELVNKISFALKRLPKPVVMSTDGAVAGAAANIAVAADFCIASDKTRFIQAFVNVGLAPDAGGLFLLTRAIGITRATQLAMTGEALNAEKALEYGIVYKVCEPEKLEKITDRVITRLKRGSVNSYKAIKEMVWQSSFAGWQEYEDLELELQKSLAFTNDFKEGVRAYTEKRRPKFTGK
>NZ_AP019720.1|WP_002262531.1|423742_424177_+|MarR-family-transcriptional-regulator
MDYKQINTYLVDIFNKIMIIEEMSLKTSQFNDVSLKEMHTVDIIGKNANVTPSDIAHELLVTLGTVTTSLNKLEKKGYIERTRSQLDRRVVYLTLTQKGRLLYRLHNRFHKNVVNRITEAMDATELGALEKGLRNLHQFLEGLV
>NZ_AP019720.1|WP_002266866.1|424176_425154_+|ketoacyl-ACP-synthase-III
MTFAKISQAAYYVPSQVVTNDDLSKIMDTSDEWITSRTGIRERRISQSEDTSDLASQVAKELLKKASLKAKEIDFIIVATITPDAMMPSTAACVQAKIGAVNAFAFDLTAACSGFIFALSAAEKMIKSGQYQKGLVIGAEVLSKIIDWSDRTTAVLFGDGAGGVLLEADSSEHFLFESIHSDGSRGESLTSGEHAVSSPFSQVDKKDNCFLKMDGRAIFDFAIRDVSKSISTLIRKSDMPVEAIDYFLLHQANIRILDKMAKKIGADREKFPANMMKYGNTSAASIPILLAECVENGTIELNGSHTVLLSGFGGGLTWGSLIVKI
>NZ_AP019720.1|WP_002262533.1|425213_425438_+|acyl-carrier-protein
MAVFEKVQEIIVEELGKDTDEVKLETTFDELDADSLDVFQVISEIEDEFDIQIESEDGLNTVGDLVAFVEEKTK
>NZ_AP019720.1|WP_002262534.1|425540_426506_+|enoyl-[acyl-carrier-protein]-reductase-FabK
MKTRITELLDIEYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKAVTNKPFGVNIMLLSPFADDIVDLVIEEGVKVVTTGAGNPGKYIERFHEAGITVIPVVPSVALARRMEKLGADAVIAEGMEAGGHIGKLTTMTLVRQVVDAVNIPVIGAGGVADGRGAAAVFMLGAEAIQVGTRFAVAKESNAHANFKKKILKAKDIDTVISASIVGHPVRAIKNKLSSAYATAEKEFLRGEKSQEDIEVLGAGALRNAVVDGDVDNGSVMAGQIAGFVTKEETCEEILKDLYYGAAKVIKAEAARWADVEK
>NZ_AP019720.1|WP_002280166.1|426508_427429_+|ACP-S-malonyltransferase
MTKTAFLFAGQGTQKLGMASDLYEIYPVVKETFKTAHSILGYDVRALIDNDEEKLNQTRYAQPAILTTSVAIYRLLKEKGYQPDIVAGLSLGEYSSLVAAGAISFEDALALVAKRGEFMETAAPAGVGKMVAVMNTDPRLVEEICQKASSKGIVSPANYNTPTQIVIGGEVAAVDYAVELLKEAGSKRLISLKVSGPFHTALLKSASQKLAQALENIKFSDFTLPLVGNTEAEIMEEHEIKSLLARQVKEPVRFYESIAVMQKFGVNNYVEIGPGKVLSGFVKKIDKSAKISAVEDLASLQAFLDN
>NZ_AP019720.1|WP_002280167.1|427443_428178_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MEIKNKNVFITGSTRGIGLAIAHKFAQAGANIVLNGRSEISQDLVVEFKDYGVKVATISGDVSHFEDAKRMVDEATEALGSVDILVNNAGITNDKLMLKMTEEDFERVLKINLTGSFNMTKAVLKPMTKARQGAIINMSSVVGLAGNVGQANYAASKAGLIGFTKAVAREVAARNVRVNAIAPGFIESEMTERIPDKMKDAMLNQIPMKTFGKTENVAEVAIFLAQQDYLTGQVIAIDGGMTMQ
>NZ_AP019720.1|WP_002262537.1|428226_429459_+|beta-ketoacyl-ACP-synthase-II
MTLKRVVVTGYGVTSPIGHTPEDFWNSLHDGKIGIKPITKFDASEIPVFNAGEIQDFPFDKYFVKKDKNRMDTYSLYAIYAAMEAIENAALDMAQEIRDRVGVIVSSGIGGLQELEDQIIRMHERGMKRIKPMFIPKALSNMGAGNIALKIGAQGVCKSITTACASANDAIGEAFREIKYGFHDVILAGGSEASITKIGIGGFNALTALSTTEDPARSAIPFDKDRNGFVMGEGAAVLILESLEHAQKRGARILAEVVGYGSNCDAYHMTTPTPDGSGAAKAIKLAINEAGISPEEVNYVNAHGTSTQANEKGESKAIVAVLGKDVPVSSTKSFTGHLLGAAGGVEAIATIEAIRNHFVPMTAGTKELSEDIEANVVYGQGQEADIKYAISNTFGFGGHNAVLAFKRWED

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP019720_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019720_2

741871-742104

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAA	CRISPRCasFinder
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	CRT

3 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_AP019720_2

>merge|NZ_AP019720|2|741871-742104|CRISPRCasFinder,CRT
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAACGAAAAGCCAGCTCAAGACGATAATCTTGAGGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAACCTGTTAATTCAAACTCATGTAACACAGGCTGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAATCGGCATATATAATCCGTAAAGGCGGCACATGTTTTAGAGCCATGTTAGTTACTGATTTACTAAAAC

>NZ_AP019720|2|2|741871-742037|CRISPRCasFinder
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAA	CGAAAAGCCAGCTCAAGACGATAATCTTGAG
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAA	CCTGTTAATTCAAACTCATGTAACACAGGCT
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAA

>NZ_AP019720|2|2|741871-742104|CRT
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	GAAAAGCCAGCTCAAGACGATAATCTTGAG
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	CTGTTAATTCAAACTCATGTAACACAGGCT
GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAT	CGGCATATATAATCCGTAAAGGCGGCACAT
GTTTTAGAGCCATGTTAGTTACTGATTTACTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019720.1\|WP_002263546.1\|740371_741034_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_AP019720.1\|WP_002272311.1\|742186_743080_-\|LexA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|119397
NZ_AP019720.1\|WP_002265423.1\|741130_741322_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_AP019720.1\|WP_002270553.1\|749691_750300_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019720.1\|WP_002269450.1\|741339_741717_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|374224
NZ_AP019720.1\|WP_002280229.1\|733890_734757_+\|NADPH-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|377026
NZ_AP019720.1\|WP_002262717.1\|746365_748201_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_AP019720.1\|WP_002262720.1\|743395_743680_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_AP019720.1\|WP_002279994.1\|743842_745594_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|369832
NZ_AP019720.1\|WP_002269623.1\|750364_751021_-\|Pr6Pr-family-membrane-protein	unknown	unknown	unknown
NZ_AP019720.1\|WP_002264337.1\|751339_752980_+\|phosphoenolpyruvate-carboxykinase-(ATP)	unknown	unknown	gnl\|CDD\|236471
NZ_AP019720.1\|WP_018110186.1\|745723_745954_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019720.1\|WP_002280230.1\|735137_739175_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_AP019720.1\|WP_002268969.1\|749135_749612_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_AP019720.1\|WP_002280228.1\|732904_733771_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_AP019720.1\|WP_002263547.1\|740037_740382_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_AP019720.1\|WP_002279995.1\|748229_749057_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_AP019720.1\|WP_002279852.1\|730104_731280_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341026
NZ_AP019720.1\|WP_002280231.1\|739174_740041_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_AP019720.1\|WP_002280227.1\|731289_732780_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|180854

Protein	Function_ID	Function_description	E-value
NZ_AP019720.1\|WP_002263546.1\|740371_741034_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.55029e-116
NZ_AP019720.1\|WP_002272311.1\|742186_743080_-\|LexA-family-transcriptional-regulator	gnl\|CDD\|119397	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the repressor of genes in the cellular SOS response to DNA damage; MucA and the related UmuD proteins, which are lesion-bypass DNA polymerases, induced in response to mitogenic DNA damage; RulA, a component of the rulAB locus that confers resistance to UV, and RuvA, which is a component of the RuvABC resolvasome that catalyzes the resolution of Holliday junctions that arise during genetic recombination and DNA repair. The LexA-like proteins contain two-domains: an N-terminal DNA binding domain and a C-terminal domain (CTD) that provides LexA dimerization as well as cleavage activity. They undergo autolysis, cleaving at an Ala-Gly or a Cys-Gly bond, separating the DNA-binding domain from the rest of the protein. In the presence of single-stranded DNA, the LexA, UmuD and MucA proteins interact with RecA, activating self cleavage, thus either derepressing transcription in the case of LexA or activating the lesion-bypass polymerase in the case of UmuD and MucA. The LexA proteins are serine proteases that carry out catalysis using a serine/lysine dyad instead of the prototypical serine/histidine/aspartic acid triad found in most serine proteases. LexA sequence homologs are found in almost all of the bacterial genomes sequenced to date, covering a large number of phyla, suggesting both, an ancient origin and a widespread distribution of lexA and the SOS response.	1.55409e-23
NZ_AP019720.1\|WP_002265423.1\|741130_741322_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	3.38968e-15
NZ_AP019720.1\|WP_002269450.1\|741339_741717_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	2.66065e-14
NZ_AP019720.1\|WP_002280229.1\|733890_734757_+\|NADPH-dependent-oxidoreductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	1.62593e-38
NZ_AP019720.1\|WP_002262720.1\|743395_743680_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	8.64754e-07
NZ_AP019720.1\|WP_002279994.1\|743842_745594_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|369832	pfam08363, GbpC, Glucan-binding protein C. This domain is found in the Streptococcus Glucan-binding protein C (GbpC) and also in surface protein antigen (Spa)-family proteins which show sequence similarity to GbpC.	3.03812e-110
NZ_AP019720.1\|WP_002264337.1\|751339_752980_+\|phosphoenolpyruvate-carboxykinase-(ATP)	gnl\|CDD\|236471	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase.	6.26078e-12
NZ_AP019720.1\|WP_002262717.1\|746365_748201_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_AP019720.1\|WP_002280230.1\|735137_739175_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_AP019720.1\|WP_002268969.1\|749135_749612_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.55706e-16
NZ_AP019720.1\|WP_002280228.1\|732904_733771_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	5.57862e-21
NZ_AP019720.1\|WP_002263547.1\|740037_740382_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.02077e-50
NZ_AP019720.1\|WP_002279995.1\|748229_749057_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.56832e-07
NZ_AP019720.1\|WP_002279852.1\|730104_731280_-\|MFS-transporter	gnl\|CDD\|341026	cd17473, MFS_arabinose_efflux_permease_like, Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily. This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.08633e-50
NZ_AP019720.1\|WP_002280231.1\|739174_740041_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	3.53858e-128
NZ_AP019720.1\|WP_002280227.1\|731289_732780_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|180854	PRK07121, PRK07121, FAD-binding protein.	1.1902e-40

>NZ_AP019720.1|WP_002269450.1|741339_741717_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MLKSYPAIFHKEEEGYWVEFPEFGGGTQGEDLEEAMKNARQMLESVLASYLDEGMKLPNPSEIRKLSVEDGFATMIQADPNPYLKNNKAIRKNVTVPEWLVQLADRDQVNYSEVLTKALEKKLQL
>NZ_AP019720.1|WP_002265423.1|741130_741322_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MPLTGKELARLAINNGWEEVRVRGSHHHFKKDGVPYIVTIPIHGNKVLKIGLEKKLLRDLNLL
>NZ_AP019720.1|WP_002263546.1|740371_741034_+|type-II-A-CRISPR-associated-protein-Csn2
MKLNFPILDEPITLEKSTILVLEDVQVFAQMVRNLYQYDEDSELKFFNRKFKSLKPSELMLVTDILGYDVNAPSLLKLVHADLENQFNEKPEVKSMVEKLANTITELIAYECLENELDLEYDEITILELIKALGVKIETQSDTIFEKMFEVLQVYKYLNKKKLLVFINTLSYFKREEIAQILEYIHLSDMVVLFLEPRKIDGFAQYILDEDYFLITESNN
>NZ_AP019720.1|WP_002263547.1|740037_740382_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNSANTAMIARLKENNPKKGNITLLTVTEKQFARMIYLNGERDTSIANSDSRLVFLGEAFPDET
>NZ_AP019720.1|WP_002280231.1|739174_740041_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVVVNTHSKLSYKNNHLIFKDTYQTEMIHLSEIDILLLETTDIVLSTMLVKRLVDENILLIFCDDKRLPTAMLMPYYARHDSSLQLNNQISWAEEVKCDVWTTIIAQKILNQSCYLGECSYFEKSQSIMDLYHDLEPFDPSNREGHSARIYFNTLFGNDFFREQDNDINAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPIVDRIVYENRNNSFIKIKRELFSMFSDTYLYNNKEMYLTNIVSDYTKKVIKALNNDGKGVPEFRI
>NZ_AP019720.1|WP_002280230.1|735137_739175_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKKPYSIGLDIGTNSVGWAVVTDDYKVPAKKMKVLGNTDKSHIKKNLLGALLFDSGNTAADRRLKRTARRRYTRRRNRILYLQEIFAEEMSKVDDSFFHRLEDSFLVTEDKRGERHPIFGNLEEEVKYHENFPTIYHLRQYLADNPEKVDLRLVYLALAHIIKFRGHFLIEGKFDTRNNDVQRLFQEFLAVYDNTFENSSLQEQNVQVEEILTDKISKSAKKDRVLKLFPNEKSNGRFAEFLKLIVGNQADFKKHFELEEKAPLQFSKDTYEEELEVLLAQIGDNYAELFLSAKKLYDSILLSGILTVTDVSTKAPLSASMIQRYNEHQMDLAQLKQFIRQKLSDKYNEVFSDVSKDGYAGYIDGKTNQEAFYKYLKGLLNKIEGSGYFLDKIEREDFLRKQRTFDNGSIPHQIHLQEMRAIIRRQAEFYPFLADNQDRIEKILTFRIPYYVGPLARGKSDFAWLSRKSADKITPWNFDEIVDKESSAEAFINRMTNYDLYLPNQKVLPKHSLLYEKFTVYNELTKVKYKTEQGKTAFFDANMKQEIFDGVFKVYRKVTKDKLMDFLEKEFDEFRIVDLTGLDKENKVFNASYGTYHDLCKILDKDFLDNSKNEKILEDIVLTLTLFEDREMIRKRLENYSDLLTKEQVKKLERRHYTGWGRLSAELIHGIRNKESRKTILDYLIDDGNSNRNFMQLINDDALSFKEEIAKAQVIGETDNLNQVVSDIAGSPAIKKGILQSLKIVDELVKIMGHQPENIVVEMARENQFTKQGRRNSQQRLKGLTDSIKEFGSQILKEHPVENSQLQNDRLFLYYLQNGRDMYTGEELDIDYLSQYDIDHIIPQAFIKDNSIDNRVLTSSKENRGKSDDVPSKDVVRKMKSYWSKLLSAKLITQRKFDNLTKAERGGLTDDDKAGFIKRQLVETRQITKHVARILDERFYTETDENNKKIRQVKIVTLKSNLVSNFRKEFELYKVREINDYHHAHDAYLNAVIGKALLGVYPQLEPEFVYGDYPHFHGHKENKATAKKFFYSNIMNFFKKDDVRTDKNGEIIWKKDEHISNIKKVLSYPQVNIVKKVEEQTGGFSKESILPKGNSDKLIPRKTKKFYWDTKKYGGFDSPIVAYSILVIADIEKGKSKKLKTVKALVGVTIMEKMTFERDPVAFLERKGYRNVQEENIIKLPKYSLFKLENGRKRLLASARELQKGNEIVLPNHLGTLLYHAKNIHKVDEPKHLDYVDKHKDEFKELLDVVSNFSKKYTLAEGNLEKIKELYAQNNGEDLKELASSFINLLTFTAIGAPATFKFFDKNIDRKRYTSTTEILNATLIHQSITGLYETRIDLSKLGGD
>NZ_AP019720.1|WP_002280229.1|733890_734757_+|NADPH-dependent-oxidoreductase
MKLVAIVGSNASFSYNRLLLQFIKERFGQAFALEILEIKELPLFNQDSSAADCPLIQKLNEDILNADGIIIATAEHNQTITASLKSMLEWLSYQLHPFKNKPVMIVGASYYNQGTSHAQEHLRQILNAPGLDAWVMPGNEFFLGNASEVFDENNQIKDDDTVIYLAQCLQRFIRYVTVVQELKGDSIQLSDAISGASESVQEDSATSAMLEKQLSLQKKETNTPFERALDKTYGPALKDTLEDPFDKDLDAQYKAIKKQPIPFEKALDNIFGKDLGIETTDPLDNLLR
>NZ_AP019720.1|WP_002280228.1|732904_733771_+|helix-turn-helix-transcriptional-regulator
MVRFISNTLSQTLNEPFQQSHKSCKHLYILEILSQVVIVSDQKQVPLQPYDIILAQSFNHLQIDSLDRNPILLRLYSLDFDLPSPLNQYTVGDNPLIHDLMNDHTSEDAYILFTNLSDLICHAYLDALEKLENLRDNNDEQVYIDFQRQKLAGLLFTELLRQHDAKVSKFASRFPSVNVKYASKDSQSGAIMKYVSDNVHHISLKEAAAHFFYQANYFSRLCHELFGISFNQLKTTIRLEIAKEQLRLTTKSVEEISQELGYKAVSNFHRNFKSQTGMTPNDYRQDKQ
>NZ_AP019720.1|WP_002280227.1|731289_732780_-|FAD-dependent-oxidoreductase
MEKEYKVDVVVAGAGGAGLAAAHAAAQNGLKVLVLEKLKQIGGNTRISSGFFAINTKEQNAAGLKLSTQEAIRQLQEHNHFLSNGALLKNIIEHAKETLEEIEKLGMEIKLNPTKNSTQFAHFGNDYQGGSYHMYMNKDSSYLQIQKSLEAMGVTFIFGVRMTELLQDSNGHVRGLKALNDAGESMTVHAKASIITTGGFGGDKRRVAKVMRTLNLRTLGVPNMGEGLSAMEAAGGVNIDGSALIHAAQMAQSTVTQETKGKQLAGFNDSPLTQLLLSPLLWVDPNGSRFTNEDVVYDTVQWSNAAYGVGSKYYYVMDTATLESYTKQPLLTISKSGPGASQAKGDFVSLAEQAVQQGIAFKGDSLEELAQNSGMDPIAFKATVAEYNKAIASQNDEIFSKSASSLKYDVKKGPFYAFIAQVVYLGTVGGVRVDKDLRVLDAYMKAISGLYTGGANAGGYYAPRNYPAYEGLASGFSWTSGRLAGLAAANDIKKYN
>NZ_AP019720.1|WP_002279852.1|730104_731280_-|MFS-transporter
MNQKNLSPSSWFFKISVLSLSILAMTAPSISIANNLLQKTFTQQSTAEIEMISTLPNFGVLLLILFADTIANKFGIKRTIMAGLLMYLLGGVLPSFIPNYYAIVFLRFLMGCGIGLFNPFSVSLMYRFYKDQELSDMLGFQNTGQNLGNAGFGFLLGALVLAGWKVAFMGYFIALIPLILFGAFVVIPDDQPTIKKERPKLADSINGHILLLALLFLIIFGMFMMMTIKMALFGAETGLISASAASSILAVLGLSSMFSAIAFGKLSKRVGNFMLPISLTGIAMGFFIVASASNAAMVVLGVIIAGIFFGWVFPQAFLRAAQVGPKEGGTLTTSVILMGINLGAFLSPSVVNFVANLLGNKTAASVLAMCGWGFALLAILEYLYTFFNQRT
>NZ_AP019720.1|WP_002272311.1|742186_743080_-|LexA-family-transcriptional-regulator
MGRGKLTPQDLEAMKAISANLQRLLAESGMKQSHLATILNIPTSSLNEYVKGKSLPKIGNIQKIADYFGLQKSDIDPRFASKKDSSTLDKINHIAKQLEMKRQIKVLDFCYQQSKEQDETASLSASDETTDDKVADKSNHTQYQKVVDSFIAKELNDQTIIHWDNVIKAKDLYQTFGRQYENIQIYGEVSAGTGIWVGHEKQETIKYPIPIPEHDIALTVNGNSMEPLFYNGDVIFVKKTKAIHHGQIIVVIVNNEAYVKKLYRKNKEIRLISLNPDYDDIILKEDDTIEVIGTVIT
>NZ_AP019720.1|WP_002262720.1|743395_743680_+|helix-turn-helix-transcriptional-regulator
MQFVWESNGKLKGDAEVEKLTLRALRVNYSLSPKEVADCLGIPQHTLLSYEEDSSEIPIQLANDLANYYDISLDSIFFGKNSDLKQKFKNKNNR
>NZ_AP019720.1|WP_002279994.1|743842_745594_+|LPXTG-cell-wall-anchor-domain-containing-protein
MKSKTAKITLLSSLALAAFGATNVFADEASTQLNSDTVAAPTADTQASEPAATEKEQSPVVAVVESHTQGNTTTTTSQVTSKELEDAKANANQEGLEVTETEAQKQPSVEAADADNKAQAQTINTAVADYQKAKAEFPQKQEQYNKDFEKYQSDVKEYEAQKAAYEQYKKEVAQGLASGRVEKAQGLVFINEPEAKLSIEGVNQYLTKEARQKHATEDILQQYNTDNYTASDFTQANPYDPKEDTWFKMKVGDQISVTYDNIVNSKYNDKKISKVKINYTLNSSTNNEGSALVNLFHDPTKTIFIGAQTSNAGRNDKISVTMQIIFYDENGNEIDLSGNNAIMSLSSLNHWTTKYGDHVEKVNLGDNEFVKIPGSSVDLHGNEIYSAKDNQYKANGATFNGDGADGWDAVNADGTPRAATAYYGAGAMTYKGEPFTFTVGGNDQNLPTTIWFATNSAVAVPKDPGAKPTPPEKPELKKLTVTWHKNLVVETKTEEVPPVTPPTTPDEPTPEKPKTPEDPQSPVVAKSVSFRTARKGEMRVRERDYQPTLPHTGAAKQNGLATLGVISTAFAAATLIAARKKEN
>NZ_AP019720.1|WP_018110186.1|745723_745954_+|hypothetical-protein
MLIPSQFCGGGTAELKSQFHYDLPIFIPLFVVFVMGKFTISIMEILSSPKRSYDFIVRLNGLSLFDMQNIGIFNNN
>NZ_AP019720.1|WP_002262717.1|746365_748201_+|elongation-factor-4
MTIEQLKNRQEKIRNFSIIAHIDHGKSTLADRILEQTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYKAKNGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRTEIEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPKGDVEAPLKALIFDSVYDAYRGVILQIRVMDGMVKPGDKIELMSNGKTFDVTEVGIFTPKAVNRDFLATGDVGYLAASIKTVADTRVGDTVTLADCPAEAPLHGYKQLNPMVFAGIYPIDSSKYNDMREALEKLQLNDASLHFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVYTTDGERLEVSNPSEFPDPTKVDSIEEPYVKAQIMVPQEYVGAVMELSQRKRGDFVTMDYIDNNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDISEYRKSKLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKSIGSVEVPQEAFLSVLSMDDDDKKK
>NZ_AP019720.1|WP_002279995.1|748229_749057_+|alpha/beta-hydrolase
MAALNKEMVNTLLGPIYTCHREGNPCLVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQVNVGLRDWVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTAMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRRLNDVQSLPDFKIRLALGEEDFKTVISEKVPSIVFSESFREKEYLESEYLNKHTQTKLILCGQHHYLHWSETNSILEKAEQLLSNHEKL
>NZ_AP019720.1|WP_002268969.1|749135_749612_+|GNAT-family-N-acetyltransferase
MSIRLAQVTDIPVLKELLNQIFQVHQTVRPDLFKNTDKGSKYSETELKELLQDESKPIFVYTDGKNRVLGHLFLVIKETEGSSVSKPLKTLFIDDLCVSKEARGQKIGQELFEFALKYAKKLGCYDLTLNVWNDNKGALAFYERQGLKARETKMEKIL
>NZ_AP019720.1|WP_002270553.1|749691_750300_+|hypothetical-protein
MPRRRASRRKSKKKAVFSILLTGITLIIIGLAVYFISAYFTNTKKTANKEKTQTHIVNPKKDPEEKKEADSSSKATSKFDLTTIATGDYSSAAGTWQNELGDQLKFNASGLESATIQNATDFTISSGQATNDGLYQATLTSADSTVVYNLLFVKGGTAIPENYFTTGYSDTSDTSRDRLYISSQTTFGSDDFSKGIFYKSEN
>NZ_AP019720.1|WP_002269623.1|750364_751021_-|Pr6Pr-family-membrane-protein
MSKTQAFRSLIALLGLIGVSIQIKQSGWGMLLYYTTLSNVIVFSFLTYLVIKEKRNGSINSNPKLLRLKGGVTMTIMITFMVYHFLLAPKVRSYDYYTIRNFLVHYIVPLSTIFDTLICDRRKIYRWFDPIIWTCLPLLYFGFALINGLLLKWPIPGTADSPFPYFFINMNKYGAQQVLINALVIALLYLLFGYILLGIKQMIGQKRQVTDNSSLNMS
>NZ_AP019720.1|WP_002264337.1|751339_752980_+|phosphoenolpyruvate-carboxykinase-(ATP)
MVTRQHFSEDSMRKNNSYFSALKATIETAFYENHVVPLKELAEAYRLAAKSPNTIVLDTPVAHAEDLGLPKDAKILLENSGGIVGRTAKARRIFGQDSKEDAKILQIIREAIFQARHRTFYRADAVVGLDEAFMLRAHLMVPQDDINNLYSWLNNFQVLNDTYRERLKKSKRYEETDIYIFSDPEWSHPDYPDGLVYFDTNHNCAAILGLHYFGELKKATLTLAWGTANRNKYVACHGGLKIFEKEGQKPYVASFFGLSGSGKSTLTHAKHNGKYRIDVLHDDAFVISEEDGSTIALEPAYFDKTNDYPAGHREQKYFVAVQNCGAALDKEGHLRLVTEDIRNGNGRTIKSRFSTPNRVDRINHPIQSIFWIMKDDSLPPLIRVTDPIMASIMGCTLVTTRSTAENTTDSLDALIIEPYANPFRVYPLVEDYIKFQHLFESGVNCYIINTGSYLGQDIPKETTLDVIEQVVDGTAKFESFGSVKGFEYLSSSHYKIPNFDKAYVKIIRQRMKIRLQYLEAFNRKNPKLSLPDEAISHLKDVLANLG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP019720_2	2.4\|741973\|30\|NZ_AP019720\|CRT	741973-742002	30	DQ386162	Streptococcus phage M102AD, complete genome	17809-17838	0	1.0
NZ_AP019720_1	1.4\|412306\|35\|NZ_AP019720\|PILER-CR,CRISPRCasFinder,CRT	412306-412340	35	MT430910	Streptococcus phage smHBZ8, complete genome	16128-16162	1	0.971
NZ_AP019720_2	2.2\|741972\|31\|NZ_AP019720\|CRISPRCasFinder	741972-742002	31	DQ386162	Streptococcus phage M102AD, complete genome	17809-17839	1	0.968
NZ_AP019720_1	1.4\|412306\|35\|NZ_AP019720\|PILER-CR,CRISPRCasFinder,CRT	412306-412340	35	AM749121	Streptococcus phage M102 complete genome	15930-15964	2	0.943
NZ_AP019720_1	1.4\|412306\|35\|NZ_AP019720\|PILER-CR,CRISPRCasFinder,CRT	412306-412340	35	NC_012884	Streptococcus phage M102, complete genome	15930-15964	2	0.943
NZ_AP019720_1	1.4\|412306\|35\|NZ_AP019720\|PILER-CR,CRISPRCasFinder,CRT	412306-412340	35	DQ386162	Streptococcus phage M102AD, complete genome	16052-16086	2	0.943
NZ_AP019720_1	1.2\|412174\|35\|NZ_AP019720\|PILER-CR,CRISPRCasFinder,CRT	412174-412208	35	KJ608188	Enterococcus phage EFC-1, complete genome	9693-9727	4	0.886
NZ_AP019720_1	1.2\|412174\|35\|NZ_AP019720\|PILER-CR,CRISPRCasFinder,CRT	412174-412208	35	MK448822	Streptococcus phage Javan629, complete genome	8243-8277	7	0.8
NZ_AP019720_1	1.2\|412174\|35\|NZ_AP019720\|PILER-CR,CRISPRCasFinder,CRT	412174-412208	35	MK448930	Streptococcus phage Javan406, complete genome	9950-9984	7	0.8
NZ_AP019720_2	2.3\|741907\|30\|NZ_AP019720\|CRT	741907-741936	30	MT773554	Myoviridae sp. isolate BML_2 genomic sequence	115852-115881	7	0.767
NZ_AP019720_2	2.1\|741906\|31\|NZ_AP019720\|CRISPRCasFinder	741906-741936	31	MT773554	Myoviridae sp. isolate BML_2 genomic sequence	115852-115882	8	0.742
NZ_AP019720_1	1.6\|412438\|33\|NZ_AP019720\|PILER-CR,CRISPRCasFinder,CRT	412438-412470	33	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	1031216-1031248	10	0.697

1. spacer 2.4|741973|30|NZ_AP019720|CRT matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 0, identity: 1.0

ctgttaattcaaactcatgtaacacaggct	CRISPR spacer
ctgttaattcaaactcatgtaacacaggct	Protospacer
******************************

2. spacer 1.4|412306|35|NZ_AP019720|PILER-CR,CRISPRCasFinder,CRT matches to MT430910 (Streptococcus phage smHBZ8, complete genome) position: , mismatch: 1, identity: 0.971

agagctcgaaaagagcataactaacccaacaacaa	CRISPR spacer
agagctcgaaaagagcataactaatccaacaacaa	Protospacer
************************.**********

3. spacer 2.2|741972|31|NZ_AP019720|CRISPRCasFinder matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 1, identity: 0.968

cctgttaattcaaactcatgtaacacaggct	CRISPR spacer
tctgttaattcaaactcatgtaacacaggct	Protospacer
.******************************

4. spacer 1.4|412306|35|NZ_AP019720|PILER-CR,CRISPRCasFinder,CRT matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 2, identity: 0.943

agagctcgaaaagagcataactaacccaacaacaa	CRISPR spacer
agagcttgaaaagagcataactaatccaacaacaa	Protospacer
******.*****************.**********

5. spacer 1.4|412306|35|NZ_AP019720|PILER-CR,CRISPRCasFinder,CRT matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 2, identity: 0.943

agagctcgaaaagagcataactaacccaacaacaa	CRISPR spacer
agagcttgaaaagagcataactaatccaacaacaa	Protospacer
******.*****************.**********

6. spacer 1.4|412306|35|NZ_AP019720|PILER-CR,CRISPRCasFinder,CRT matches to DQ386162 (Streptococcus phage M102AD, complete genome) position: , mismatch: 2, identity: 0.943

agagctcgaaaagagcataactaacccaacaacaa	CRISPR spacer
agagcttgaaaagagcataactaatccaacaacaa	Protospacer
******.*****************.**********

7. spacer 1.2|412174|35|NZ_AP019720|PILER-CR,CRISPRCasFinder,CRT matches to KJ608188 (Enterococcus phage EFC-1, complete genome) position: , mismatch: 4, identity: 0.886

aatttgaaatgtctatccaatcagaagatttatca	CRISPR spacer
aatttgaaatgtctatccaagcggaagatttaact	Protospacer
******************** *.********* *

8. spacer 1.2|412174|35|NZ_AP019720|PILER-CR,CRISPRCasFinder,CRT matches to MK448822 (Streptococcus phage Javan629, complete genome) position: , mismatch: 7, identity: 0.8

aatttgaaatgtctatccaatcagaagatttatca	CRISPR spacer
aatttgaaatgtctatccaagcagaagaccttgtt	Protospacer
******************** *******..*  .

9. spacer 1.2|412174|35|NZ_AP019720|PILER-CR,CRISPRCasFinder,CRT matches to MK448930 (Streptococcus phage Javan406, complete genome) position: , mismatch: 7, identity: 0.8

aatttgaaatgtctatccaatcagaagatttatca	CRISPR spacer
aatttgaaatgtctattcaagcagaagacctagtt	Protospacer
****************.*** *******..** .

10. spacer 2.3|741907|30|NZ_AP019720|CRT matches to MT773554 (Myoviridae sp. isolate BML_2 genomic sequence) position: , mismatch: 7, identity: 0.767

gaaaagccagctcaagacgataatcttgag	CRISPR spacer
atacatccagctaaaggcgataatcttgaa	Protospacer
. * * ****** ***.************.

11. spacer 2.1|741906|31|NZ_AP019720|CRISPRCasFinder matches to MT773554 (Myoviridae sp. isolate BML_2 genomic sequence) position: , mismatch: 8, identity: 0.742

cgaaaagccagctcaagacgataatcttgag	CRISPR spacer
aatacatccagctaaaggcgataatcttgaa	Protospacer
 . * * ****** ***.************.

12. spacer 1.6|412438|33|NZ_AP019720|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 10, identity: 0.697

aagatggctggaatatgaaggagaggtagaaag	CRISPR spacer
ttgatggctggaagatcaaggagagggcttcgg	Protospacer
  *********** ** *********     .*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

491322 : 505165

Streptococcus_phage(84.62%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002262678.1\|491322_492087_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-16	26.4
WP_002262679.1\|492086_492797_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.2e-19	28.9
WP_002264029.1\|492912_493572_+	CBS domain-containing protein	M1NSC5	Streptococcus_phage	8.6e-67	60.6
WP_002264028.1\|493647_494286_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.3e-75	65.1
WP_002280200.1\|494298_495174_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	4.9e-78	53.8
WP_002274530.1\|495170_495977_+	signal peptidase II	NA	NA	NA	NA
WP_002271433.1\|495969_496302_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.1e-29	59.1
WP_002264025.1\|496307_497174_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.7e-115	73.9
WP_002280199.1\|497478_498714_+	ammonium transporter	NA	NA	NA	NA
WP_002264023.1\|498729_499071_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_002280198.1\|499290_500382_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	3.4e-169	79.0
WP_002270504.1\|500499_500640_+	hypothetical protein	NA	NA	NA	NA
WP_002280197.1\|500790_501345_+	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	2.1e-50	63.3
WP_002280196.1\|501430_502612_+	D-3-phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	3.0e-179	79.3
WP_002262692.1\|502700_503195_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	9.7e-47	56.1
WP_002272344.1\|503231_503585_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	2.1e-40	67.0
WP_002264017.1\|503649_504273_+	endonuclease III	NA	NA	NA	NA
WP_002266825.1\|504337_505165_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	7.4e-124	76.9

DBSCAN-SWA_2

1031961 : 1040745

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002279947.1\|1031961_1032552_+	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	8.1e-16	33.2
WP_002279946.1\|1032561_1033824_+	serine hydroxymethyltransferase	A0A219YB23	Aeromonas_phage	4.8e-98	51.8
WP_002264268.1\|1033820_1034798_+	nucleoid-associated protein	NA	NA	NA	NA
WP_002262260.1\|1034799_1035414_+	lysozyme family protein	A0A223LKM8	Bacillus_phage	1.2e-22	37.6
WP_002279945.1\|1035423_1037157_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.3e-39	25.8
WP_002279944.1\|1037153_1038899_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.9e-53	29.2
WP_002264266.1\|1039029_1040745_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	7.5e-272	82.5

DBSCAN-SWA_3

1175450 : 1182300

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002280030.1\|1175450_1177205_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.9e-42	27.6
WP_002280031.1\|1177194_1178997_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.9e-32	24.7
WP_002263292.1\|1179000_1179435_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002263291.1\|1179986_1180640_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	7.7e-60	52.4
WP_002263290.1\|1180639_1181086_+	6-carboxytetrahydropterin synthase QueD	J9PV91	Bacillus_phage	1.1e-41	60.6
WP_002263289.1\|1181082_1181799_+	7-carboxy-7-deazaguanine synthase QueE	E7DN68	Pneumococcus_phage	4.8e-63	48.4
WP_002280032.1\|1181811_1182300_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	5.6e-47	57.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP019720

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection