CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP019729	Parabacteroides distasonis strain NBRC 113806	2 crisprs	RT,PrimPol,DEDDh,cas3,PD-DExK,WYL	0	0	7	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP019729_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019729_1

839960-840045

Orphan

Consensus_repeat	Method
GAGACGGGGCACGCCCCGTCTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019729_1

>merge|NZ_AP019729|1|839960-840045|CRISPRCasFinder
GAGACGGGGCACGCCCCGTCTCATCCTTTCAAAATGGTAACTTAAAATACTATCAGACTGTGGGAGACGGGGCACGCCCCGTCTCT

>NZ_AP019729|1|1|839960-840045|CRISPRCasFinder
GAGACGGGGCACGCCCCGTCTCA	TCCTTTCAAAATGGTAACTTAAAATACTATCAGACTGTGG
GAGACGGGGCACGCCCCGTCTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019729.1\|WP_048928681.1\|834698_835841_-\|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|341466
NZ_AP019729.1\|WP_005863085.1\|851957_853622_+\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|378943
NZ_AP019729.1\|WP_122378557.1\|848814_851928_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
NZ_AP019729.1\|WP_005857830.1\|845631_846204_-\|RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|274376
NZ_AP019729.1\|WP_048928686.1\|844645_845581_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_AP019729.1\|WP_048928687.1\|846270_847017_-\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|184516
NZ_AP019729.1\|WP_048928682.1\|835883_836657_-\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NZ_AP019729.1\|WP_048928683.1\|837392_838187_-\|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl\|CDD\|234710
NZ_AP019729.1\|WP_009017213.1\|831957_832698_+\|(Fe-S)-binding-protein	unknown	unknown	gnl\|CDD\|223325
NZ_AP019729.1\|WP_048928685.1\|839368_839935_-\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|223586
NZ_AP019729.1\|WP_008772471.1\|831314_831896_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_AP019729.1\|WP_008779674.1\|840057_841461_-\|anthranilate-synthase-component-I-family-protein	unknown	unknown	gnl\|CDD\|223225
NZ_AP019729.1\|WP_048928684.1\|838200_839199_-\|anthranilate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234682
NZ_AP019729.1\|WP_009017214.1\|832694_834062_+\|lactate-utilization-protein	unknown	unknown	gnl\|CDD\|224062
NZ_AP019729.1\|WP_008772462.1\|841457_842642_-\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
NZ_AP019729.1\|WP_009017215.1\|834061_834640_+\|LUD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224473
NZ_AP019729.1\|WP_005863095.1\|843093_844527_+\|aspartate-ammonia-lyase	unknown	unknown	gnl\|CDD\|237031
NZ_AP019729.1\|WP_005857809.1\|847031_847400_-\|DUF488-family-protein	unknown	unknown	gnl\|CDD\|225730
NZ_AP019729.1\|WP_141806792.1\|847560_848580_+\|FecR-domain-containing-protein	unknown	unknown	gnl\|CDD\|226235
NZ_AP019729.1\|WP_044544558.1\|836682_837396_-\|phosphoribosylanthranilate-isomerase	unknown	unknown	gnl\|CDD\|238237

Protein	Function_ID	Function_description	E-value
NZ_AP019729.1\|WP_048928681.1\|834698_835841_-\|iron-containing-alcohol-dehydrogenase	gnl\|CDD\|341466	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction is 50-fold lower than that in the forward direction. The NADH-BDH has higher activity with longer chained aldehydes and is inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases. This family also includes E. coli YqhD enzyme, an NADP-dependent dehydrogenase whose activity measurements with several alcohols demonstrate preference for alcohols longer than C3. The active site of YqhD contains a Zn metal, and a modified NADPH cofactor bearing OH groups on the saturated C5 and C6 atoms, possibly due to oxygen stress on the enzyme, which would functionally work under anaerobic conditions.	0
NZ_AP019729.1\|WP_005863085.1\|851957_853622_+\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	gnl\|CDD\|378943	pfam12771, SusD-like_2, Starch-binding associating with outer membrane. SusD is a secreted starch-binding protein with an N-terminal lipid tail that allows it to associate with the outer membrane.	4.0212e-47
NZ_AP019729.1\|WP_122378557.1\|848814_851928_+\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_AP019729.1\|WP_005857830.1\|845631_846204_-\|RNA-polymerase-sigma-70-factor	gnl\|CDD\|274376	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found primarily in the genus Bacteroides. This family appears to have resulted from a lineage-specific expansion as B. thetaiotaomicron VPI-5482, Bacteroides forsythus ATCC 43037, Bacteroides fragilis YCH46 and Bacteroides fragilis NCTC 9343 contain 25, 12, 24 and 23 members, respectively. There are currentlyonly two known members of this family outside of the Bacteroides, in Rhodopseudomonas and Bradyrhizobium.	2.28246e-56
NZ_AP019729.1\|WP_048928686.1\|844645_845581_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	6.69992e-23
NZ_AP019729.1\|WP_048928687.1\|846270_847017_-\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	gnl\|CDD\|184516	PRK14115, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase.	1.46374e-179
NZ_AP019729.1\|WP_048928682.1\|835883_836657_-\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	4.29391e-117
NZ_AP019729.1\|WP_048928683.1\|837392_838187_-\|indole-3-glycerol-phosphate-synthase-TrpC	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	2.25886e-115
NZ_AP019729.1\|WP_009017213.1\|831957_832698_+\|(Fe-S)-binding-protein	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	1.50465e-48
NZ_AP019729.1\|WP_048928685.1\|839368_839935_-\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|223586	COG0512, PabA, Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism].	3.29833e-88
NZ_AP019729.1\|WP_008772471.1\|831314_831896_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	8.36213e-12
NZ_AP019729.1\|WP_008779674.1\|840057_841461_-\|anthranilate-synthase-component-I-family-protein	gnl\|CDD\|223225	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism].	3.88596e-138
NZ_AP019729.1\|WP_048928684.1\|838200_839199_-\|anthranilate-phosphoribosyltransferase	gnl\|CDD\|234682	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional.	9.1795e-116
NZ_AP019729.1\|WP_009017214.1\|832694_834062_+\|lactate-utilization-protein	gnl\|CDD\|224062	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion].	2.6855e-153
NZ_AP019729.1\|WP_008772462.1\|841457_842642_-\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NZ_AP019729.1\|WP_009017215.1\|834061_834640_+\|LUD-domain-containing-protein	gnl\|CDD\|224473	COG1556, COG1556, Uncharacterized conserved protein [Function unknown].	4.11008e-14
NZ_AP019729.1\|WP_005863095.1\|843093_844527_+\|aspartate-ammonia-lyase	gnl\|CDD\|237031	PRK12273, aspA, aspartate ammonia-lyase; Provisional.	0
NZ_AP019729.1\|WP_005857809.1\|847031_847400_-\|DUF488-family-protein	gnl\|CDD\|225730	COG3189, COG3189, Uncharacterized conserved protein [Function unknown].	1.15006e-38
NZ_AP019729.1\|WP_141806792.1\|847560_848580_+\|FecR-domain-containing-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	5.13241e-29
NZ_AP019729.1\|WP_044544558.1\|836682_837396_-\|phosphoribosylanthranilate-isomerase	gnl\|CDD\|238237	cd00405, PRAI, Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP). Most PRAIs are monomeric, monofunctional and thermolabile, but in some thermophile organisms PRAI is dimeric for reasons of stability and in others it is fused to other components of the tryptophan biosynthesis pathway to form multifunctional enzymes.	1.10911e-74

>NZ_AP019729.1|WP_048928685.1|839368_839935_-|aminodeoxychorismate/anthranilate-synthase-component-II
MKILLFDNYDSFTYNLLHILKELGTDVEVHRNDKISLEEIERFDKILLSPGPGIPEEAGILLPLIRRYAPTKSILGVCLGEQAIGEAFGATLINLTDVHHGVCSDIRIVAKDPIFEGLEPGIRVGRYHSWAVSKENFPDCLEITAVDTEEGQIMGLRHREYDVRGIQFHPESVLTPKGKTIIENWLKR
>NZ_AP019729.1|WP_048928684.1|838200_839199_-|anthranilate-phosphoribosyltransferase
MKQILYRLFEHQYLGREEARNILQNIAEGRYNDSQIASLITVFLMRSISVEELTGFREALLEMRVPVDLSEYKPIDIVGTGGDGKNTFNISTCSCFVVAGAGYNVVKHGNYGATSVSGASNVMEQHGVKFTNDIDKLRTSMDTCHIAYLHAPLFNPALKAVAPVRKSLGVRSFFNMLGPLVNPVMPTYQLLGVYNLPLLRLYNYTYQESCTRFAVVHSLDGYDEISLTADFKVAMPEKEKLYTPEMLGFKRCTEADLDGGETPEEAARIFDAVLGNRATEAQKSCVIANSAFAIQVICPEKKIETCIAEARESLESGKALATFRKFISLNQR
>NZ_AP019729.1|WP_048928683.1|837392_838187_-|indole-3-glycerol-phosphate-synthase-TrpC
MKKDILQDIIANKRIEVARQKQAVSLQTLLALGSDRMERDTRSMRAALESSPSGIIAEFKRKSPSKGWLHPGANIADVVPAYEAGGASTCSILTDGDFFGGSLGDLQKARKLVDLPLLRKDFIIDTYQLFQARVMGADAVLLIAAALTEEECRILAETAHSLQLEVLLEVHSEDELKYMNADIDMLGVNNRNLGTFHTDVNNSFKLVDKMRGFSPLLVSESGISETDTVRQLREAGFRGFLIGETFMKTERPGDTLADFIGGLA
>NZ_AP019729.1|WP_044544558.1|836682_837396_-|phosphoribosylanthranilate-isomerase
MIIKVCGMRDSRNIQEVSALAVNWIGLIFYERSPRFIGQSPTKQWTVDSGQLTVKYRLSQLSTVNCQLSTKKVGVFVNATIESMMETASAYKLDYLQLHGNESPEDCHTLQKRGYSLIKTFPIASKEDFKKTKEYEGRVDYFLFDTRCEGYGGSGKRFDWSILTEYKGETPFLLSGGIRPENAEAIRNFRHPRLAGIDLNSGFEIEPGLKDVDKLKNFIQQILHPAVETGRAPSPTV
>NZ_AP019729.1|WP_048928682.1|835883_836657_-|tryptophan-synthase-subunit-alpha
MNRITNLFQTQKDGILSVYFTAGYPNLNDTASILKALQAKGIHMVEVGIPFSDPMADGPVIQEAATQALRNGMSLHLLFEQLKEIRSEVQIPIILMGYLNPIMQYGFEKFCESCIEAGVDGMIIPDLPYADYISDYKEIADRHDLKMIMLITPETSEERIRQIDAHTSGFIYMVSSAATTGAQQDFNEQKQAYFRRINAMNLQNPRLVGFGISNKATFEAATAHSSGAIIGSKFVQLLKSEATPAEAVDKLLEALKQ
>NZ_AP019729.1|WP_048928681.1|834698_835841_-|iron-containing-alcohol-dehydrogenase
MNNFTFHNPTRLLFGKGMIEKLSTAIPMVHRIMITFGGGSVKQNGVYDQVIKALKDRDYIEFWGIEPNPTIETLREAIQIAKGKQVDFLLAVGGGSVIDGTKLISAGILYDGDPWELVQKGYYYHTVPMGTVLTLPATGSEMNSGAVISRKETQEKFPFYSNFPVFSILDPETTFSLPPYQVACGIADTFVHVMEQYMTTTDQSRLMDHWAESILSTLVEIAPKIKEDPRNYDLMADFMLSATMGLNGFIAMGVTQDWATHMIGHELTALHGLTHGATLAIVFPGTLRTLRKQKEGKILQYGERVWGIHSGTTEERVSQAIEKTEQFFQSLGLSTRLSQEKIGDTTITEIENRFNERNAAFGEAKNVTGSVAREILESCK
>NZ_AP019729.1|WP_009017215.1|834061_834640_+|LUD-domain-containing-protein
MSSKDSILASIRRHTGTCHEMPELTLEAITYADKLATFSEVLAGAGGKAIELKPGEDVNEVIRREFPEAKRIASNLKEITCATFNPDGLTDPRELNGTDVSVVEGSFGVAENAAVWLPRQVRYKGLYFISNALVILLDKTQLVHTMNEAYRRTATMDYDYGVFMSGPSKTADIEQALVFGAHGPIQVVVLLR
>NZ_AP019729.1|WP_009017214.1|832694_834062_+|lactate-utilization-protein
MSTKHAIAAARFLENKENEAWHDHTLWMVRTKRDKMSHSLPEWERLRELASEIKLYSNSHLDTLLEEFEKNAIANGAIVHWAKDAEEHNEIVLRILRQHDARNLIKSKSMLTEECHMNEFLMSKGIDVVESDLGERILQLMHLAPSHIVMPAIHIKREQISEMMEREMGTEKGNIDPTYLTHAARKNLREKFLHADVAMTGANFAVASTGEIVVCTNEGNADMGTSFPKVHIATMGMEKIVPNLEALGVFTRLLARSGTGQPITSYTSHYRRPSEGQEFHIIIVDNGRSDILAKPDHIRTLNCIRCGECMNTCPVYRRSGGYSYTYFIPGPIGINLGMLRNPEEYSDNVSACSLCLSCSNVCPVKIDLGEQIYRWRQDLDKIGKASKEKKVMSFGMKFLMERPGLFNTALKFAPVVNHLPRFMVYNGLNAWGKGRELPAFAKESFNDMWKNNKVR
>NZ_AP019729.1|WP_009017213.1|831957_832698_+|(Fe-S)-binding-protein
MKVGLFIPCYINAVYPEVGIASYKLLKHVGVDVDYPMDQTCCGQPMANAGFEDEAARLALRMEEQFKNYDYVVGPSASCVAFVKENHPHILGKRDHVCMNSKKIYDICEFLHDVVRPGSLPAVFPHKVSIHNSCHGVRELHLSSPSERNIPYYSKLRDLLSLVKGIEVFEPRRVDECCGFGGMFAIEEPEVSTCMGQDKVKDHMSTGAEYITGADSSCLMHMEGVIKREKLPIKTIHIVQILASGL
>NZ_AP019729.1|WP_008772471.1|831314_831896_+|Crp/Fnr-family-transcriptional-regulator
MDTAIFIARRIAAQSILLSEEAVEKLASILIRTELKKGALFLSEGEVCTQLGYVYKGMVRQFYFKNKKELTEHFASEDNIFICIESFLRQRPANLLVEALENTVLYGIPHDPLLALCAEDYEIEVMYRRLLENSLILSQRKADFLRFETANERYARLLKEHPEIVQRAPLSHIASYLLMTPETLSRVRANMQL
>NZ_AP019729.1|WP_008779674.1|840057_841461_-|anthranilate-synthase-component-I-family-protein
MNYSFKTISKKVMGDLHTPVSIYLKVRDIYPESALLESSDFHGNENSLSFIALRPLASIGINNGECTATFPDETREVTPLTEDYNVPEAMNAFLGRFKVEGADKKVCGLFGYTAFDAVRYFENIPVMEVHHEENDAPDMLYILYKYILVFNHFKNELTLVEMLQEDEASRLEEIETLIENRNFASYNFQTAGPETSPITGEEYKAMVRQGIKHCLRGDVFQIVLSRRFEQPFKGDDFKVYRALRSINPSPYLFYFDFGGFRIFGSSPETHCKVTGRHASIDPIAGTAFRTGNIEVDKQRTEALLADPKENAEHVMLVDLARNDLSRNAHDVQVDFYKEVQYYSHVIHLVSRVSGEINTDSDPVKTYVDTFPAGTLSGAPKVRAMQLITDIEHHNRGAYGGCIGFIGLDGDLNQAITIRTFVSRGNVLYYQAGAGIVAKSNDERELQEVNNKLGALKKAIDLAEKLIN
>NZ_AP019729.1|WP_008772462.1|841457_842642_-|tryptophan-synthase-subunit-beta
MKTYQVDKNGYYGEFGGAYVPEILHQCVENLQNTYLQVLESDSFKEEFDQLLRDYVGRPSPLYLAKRLSEKYGCKIYLKREDLNHTGAHKINNTIGQILLARRMGKTRIIAETGAGQHGVATATVCALMNMECIVYMGKTDVERQHANVQKMEMLGATVVPVTSGNMTLKDATNEAIRDWCCHPSDTYYIIGSTVGPHPYPDMVARLQSVISEEIKKQLLEKEGRDHPDYLIACVGGGSNAAGTIYHFVDDERVKIVLAEAGGKGIHSGMSAATIQLGKEGIIHGARTLVMQNEDGQIEEPYSVSAGLDYPGIGPIHANLSVKHRAQILAVDDDEALEAAFELTRLEGIIPALESAHALGALAKVNFKPEEVVVLTVSGRGDKDMDTYINYKLS
>NZ_AP019729.1|WP_005863095.1|843093_844527_+|aspartate-ammonia-lyase
MDTKLTGKTRIESDLIGAREIPAEALYGVQTLRGIENFSISKFRLSEYPLFIKGLAITKMAAAMANFELGLLTVEQKDAIIAACGEILDGKHHDQFPVDMIQGGAGTTTNMNANEVIANRALELMGHERGEYQYCSPNDHVNCSQSTNDAYPTAIHIGMYFKHLQLLPHLEELIASFRKKGEEFSQIIKMGRTQLEDAVPMTLGQTFNGFASILQDEIAHLNEAAADFLVVNMGATAIGTGICAEPGYAEKCIAALREITGWDIRLSSDLVGATSDTSCLVGYASAMKRVCVKMNKICNDLRLLASGPRCGLGEFNLPAMQPGSSIMPGKVNPVIPEVMNQIAYKVMGNELCVTMAGEAAQMELNAMEPVMAQCCFESVDLLINGFDTLRTRCVDGIIANEDRCREEVHHSIGVVTALNPVIGYKNSTKIAKEALETGVSVYQLVLDHGILTKEELDTILSPENMIKPVKLDIKPRR
>NZ_AP019729.1|WP_048928686.1|844645_845581_+|sugar-phosphate-isomerase/epimerase
MINRRDFLKNASLFTLGGLMAGKVGSTDAAKPVTSETMAAKTVGLQIYSLGKELYADVPGGLKKIKKMGYTNLELAGYKEGKIGGVDMMEFKKMVDDAGLKITSSHVNPPVREYTKANRSQISEYWKKTADDHAKLGVKYLIQPGQPSTRSTEETAFVCEIFNEAGKIVKAAGIPFGYHNHEMEFAKVNPGSTEAKLGRRVKGDCIYELFLKNTDPSLVFFEMDVYWAVMGQQDPIEWLKKYPNRIKVLHIKDRAILGESGMMNFENIFQQAYANGIKDYFVELEGMPDGRSQFEGVKGCVDYLLKAPFVK
>NZ_AP019729.1|WP_005857830.1|845631_846204_-|RNA-polymerase-sigma-70-factor
MDENAERISLELIAGDEQAFDTVYKQYYRGLCAFASQYVTVPESEEIVQDVMMWLWENRKSLVADMSLKSLLFTIVRNKCLNTISHIQVKQQVHERLYAKFQEQFENPDFYIGELMALASKAIRELPDEYRKAFEMNRFEEMTYNEIAERTGVSPKTIAYRISQALKILRTKLKDYIPLLVWLLYEQTRS
>NZ_AP019729.1|WP_048928687.1|846270_847017_-|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase
MKSIVLLRHGESVWNKENRFTGWTDVDLTEKGVAEAYRAGNLLKEKGYVFNKAYTSYLKRAVKTLNCVLDRMDQDWIPVEKSWRLNEKHYGSLQGLNKSETAQKYGDEQVLIWRRSYDIAPLPLSEGDPRNPRFDIRYKDVPDKELPRTESLKDTVERILPYWKEVIFPTLRTADQILVAAHGNSLRGIIKYLKNISDEEIVHLNLPTAVPYVFEFDDDLKLVNDYFLGDPEEIKKLMEAVANQGKKK
>NZ_AP019729.1|WP_005857809.1|847031_847400_-|DUF488-family-protein
MVKILLKRIYEEPSEADGYRILLDRLWPRGLKKEDAKFDEWRKDITPSKELRQWFHEDKDRHWEVFQGRYGMEIKQNPDFIPFLREIEKHPVVTFLTAAKDVQHSHLPILKEVIEDFEKNKS
>NZ_AP019729.1|WP_141806792.1|847560_848580_+|FecR-domain-containing-protein
MEINEDILIRYIDGMLTEEEAVEVKNWRAASLENEKLLEQVYFTAQVASRLKVMRTVNPDEALSRFKSRIHKKEKRLALRQVLGVIQRAAAVLFIPVFLLSAYLFIQQGQGNVRTLGVRTNPGVVSAFDLPDGSKVWLNANSELRYPSDFNADTRTVELTGQGYFEVTKNAHKPFIVKADKDYSVEVLGTSFNVSAYKDESMIETTLVEGSVKLNVVSGGKRMTQMLKPNEKAEYQKGADKIKVFDVNTEYDTAWKNGEIIFRNHPMDKVLKTLERHYHVVFEVKDNEILKSIITARFKDEQLPQVLEYLKLASGIQYAIHKPTVKDSGSGTSVVEISK
>NZ_AP019729.1|WP_122378557.1|848814_851928_+|TonB-dependent-receptor
MINMGVCAFCLVPAMVFAENTHEVTVLNAQQQTRKAVGVVTDKTGEAIIGANVIVKGTTNGTITDMDGRFELDVPNNATLQVSYIGFNTQEIVFTGQPSIEVQLVDDTQALDEVVVTALGIKREKKALGYSMSELKGESLTQTRDANVANALAGKVAGLQIKQNGTGVGGSSRIVIRGNNSITGNNQPLIVVDGVPIDNFSGGTDDYWGNGNVDKGSGISDISPDDIESMSVLKGPAAAALYGSRAGNGVVMITTKKGSQNKGWGVSINSNFTAENPMQTPKFQDVYGQGIDGAFDNNKATSWGAAMDGSSKDMAMGSYQYAARDNDLYKDFLRTGTTWTNSVDLSKSSEDITFRAGVTRLDNKGVVPNSGMDRTSINLRSTAKLSKWLSADVKVNYVSQHTNNRVKLAGDPDNIFLNYLSMPRSVGFSDYDAYKDNDWKRADGKPAGYLIDTGANANNPYWSAYRNTNKDKKDRFIGFAALDFTFTDWLSLKLRSGMDNYTIQYETIRATGNPYWENNGSMTANMEKFTEINSDFLLTAKGNWDRFGIVGTVGGNMMYRNSTWYKESSGEFVIPDFHAIANGKTHGGEYTRNRKQINSLYATASLSWDDYLYLDLTARNDWSSTLPKDNDSYFYPSVGVSWIFTQMLNKMGHNTGILSFGKIRASWAQVGNDTDAYMLRDYYNISYDIKGGIFNASNEDWMANPNLKNETINSWELGLELKAFENRVGVDVAYYKKNAKDQILKIDVPSATGFKKKMINAGNIENKGVEVAFNATPYISESGFQWDTQLNWSKNINKVISLTDDTKEQILSDASVSFLKIVAHEGGAYGDIYGYAYQRDDNGNIIIGADGVPLRTDDMVLLGNNQPKWMMGWSNTLSYKNFVLNFMFDMRYGGDVYMGSIRAGASSGNLEMTLDGRDGMVVPGVLADGTPNTKSITAQAYWNGLSSNNVTEAYMYDATNIRLRELSLGYNFPRTMLAKTPFTSARLSFVARNLFMIYSKTKGFDPEAAYTSGNAQGIEYGSMPTMRSLGFNINLAF
>NZ_AP019729.1|WP_005863085.1|851957_853622_+|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein
MKSNIKILAACSFMMASMASCDLTGINDNPDKPTDDVNYNMSEPRLASTLRGGMIIDGDVEQRLKPLQIDFYSQMLVDGGGWATKNYIQNDEWNNLTWQAYLTQISSINIVIRSLMEKDKDLYANTIAFARIWRVYIHSLAADKFGPMPFPAYATVEDNPPYKSVKDIYYEYFTELDEALNSFSDSAEPIFSDAGIDLVYKNDVSLWKKFGNSLRLRFAVRLSEVDREKCVAEANAALTSPCGLISSKADNAYMPPKADGSWGQDYNYTMFQITWSGPICMSKSFEKLVTNIGNIDWPAGVVNQTSGVAVSNVHPAKVDPRAPKMFQPGIENGDWKGLVYGAKAEEANTGIYQSKQCAEMGFIIKDGAPYKSRPYDMFLSEEVDFLKAELFARNLVAGDAKAAYEAGVRASFETWGVSGDVEEYLASTEKNEAGTSAKYDDQQGAGNTALEKIITQKYIAGLPDLAQEAWNDKRRLNLPRLDVAVYRDQAVYNNSDTNILNPQNFIKRMKYPMKEQLVNAAEYEKGKSMLGGKGDVVSTPIWWDKNSNYCTSSK

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Crispr_ID: NZ_AP019729_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019729_2

2759869-2759970

Orphan

Consensus_repeat	Method
AAACAAGTTTATTTTATAAACCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019729_2

>merge|NZ_AP019729|2|2759869-2759970|CRISPRCasFinder
AAACAAGTTTATTTTATAAACCATCCATGGATAAAAAATGCAAAGGAGCTGCGCATCACTCTTTGCACATCGCAAATATAGACAAGTTTATTTTATAAACCA

>NZ_AP019729|2|2|2759869-2759970|CRISPRCasFinder
AAACAAGTTTATTTTATAAACCA	TCCATGGATAAAAAATGCAAAGGAGCTGCGCATCACTCTTTGCACATCGCAAATAT
AGACAAGTTTATTTTATAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019729.1\|WP_008773447.1\|2754796_2755996_+\|threonine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236182
NZ_AP019729.1\|WP_008773446.1\|2752958_2754269_+\|anaerobic-C4-dicarboxylate-transporter	unknown	unknown	gnl\|CDD\|236503
NZ_AP019729.1\|WP_005854641.1\|2754339_2754699_-\|conjugal-transfer-protein-TraF	unknown	unknown	gnl\|CDD\|200072
NZ_AP019729.1\|WP_005864748.1\|2748001_2749246_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|223914
NZ_AP019729.1\|WP_005854619.1\|2764280_2765024_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
NZ_AP019729.1\|WP_005864731.1\|2760163_2760691_+\|O-acetyl-ADP-ribose-deacetylase	unknown	unknown	gnl\|CDD\|394878
NZ_AP019729.1\|WP_008773451.1\|2763522_2764266_+\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	unknown	unknown	gnl\|CDD\|234689
NZ_AP019729.1\|WP_048927620.1\|2757075_2759454_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|379720
NZ_AP019729.1\|WP_005864739.1\|2756158_2756443_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|316153
NZ_AP019729.1\|WP_005864737.1\|2756427_2757057_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273320
NZ_AP019729.1\|WP_008773452.1\|2766340_2767693_-\|gliding-motility-associated-protein-GldE	unknown	unknown	gnl\|CDD\|274626
NZ_AP019729.1\|WP_008773450.1\|2760671_2761331_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019729.1\|WP_005864721.1\|2765133_2765751_-\|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl\|CDD\|225002
NZ_AP019729.1\|WP_005864715.1\|2767718_2768228_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|273179
NZ_AP019729.1\|WP_005854625.1\|2761557_2762550_+\|PhoH-family-protein	unknown	unknown	gnl\|CDD\|376820
NZ_AP019729.1\|WP_008773449.1\|2759458_2759830_-\|DUF2141-domain-containing-protein	unknown	unknown	gnl\|CDD\|378303
NZ_AP019729.1\|WP_048927619.1\|2762561_2763512_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|183621
NZ_AP019729.1\|WP_005864719.1\|2765752_2766334_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|132551
NZ_AP019729.1\|WP_005864747.1\|2749429_2750272_+\|PepSY-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|371505
NZ_AP019729.1\|WP_121961154.1\|2750366_2752871_-\|DUF4982-domain-containing-protein	unknown	unknown	gnl\|CDD\|225789

Protein	Function_ID	Function_description	E-value
NZ_AP019729.1\|WP_008773447.1\|2754796_2755996_+\|threonine-ammonia-lyase	gnl\|CDD\|236182	PRK08198, PRK08198, threonine dehydratase; Provisional.	0
NZ_AP019729.1\|WP_008773446.1\|2752958_2754269_+\|anaerobic-C4-dicarboxylate-transporter	gnl\|CDD\|236503	PRK09412, PRK09412, anaerobic C4-dicarboxylate transporter; Reviewed.	0
NZ_AP019729.1\|WP_005854641.1\|2754339_2754699_-\|conjugal-transfer-protein-TraF	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	5.2821e-30
NZ_AP019729.1\|WP_005864748.1\|2748001_2749246_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|223914	COG0845, AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane].	1.35243e-16
NZ_AP019729.1\|WP_005854619.1\|2764280_2765024_+\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	2.49157e-72
NZ_AP019729.1\|WP_005864731.1\|2760163_2760691_+\|O-acetyl-ADP-ribose-deacetylase	gnl\|CDD\|394878	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family. Macrodomains are found in a variety of proteins with diverse cellular functions, as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Macrodomains can recognize ADP-ribose (ADPr) in both its free and protein-linked forms, in related ligands, such as O-acyl-ADP-ribose (OAADPr), and even in ligands unrelated to ADPr. This family includes eukaryotic macrodomain proteins such as human MacroD1 and MacroD2, and bacterial proteins such as Escherichia coli YmdB; these have been shown to be O-acetyl-ADP-ribose (OAADPr) deacetylases that efficiently catalyze the hydrolysis of OAADPr to produce ADP-ribose and free acetate. OAADPr is a sirtuin reaction product generated from the NAD+-dependent protein deacetylation reactions and has been implicated as a signaling molecule. By acting on mono-ADP-ribosylated substrates, OAADPr deacteylases may reverse cellular ADP-ribosylation.	1.33535e-100
NZ_AP019729.1\|WP_008773451.1\|2763522_2764266_+\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	gnl\|CDD\|234689	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE.	2.34407e-111
NZ_AP019729.1\|WP_048927620.1\|2757075_2759454_-\|TonB-dependent-receptor	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	9.86229e-89
NZ_AP019729.1\|WP_005864739.1\|2756158_2756443_-\|transcriptional-regulator	gnl\|CDD\|316153	pfam13601, HTH_34, Winged helix DNA-binding domain.	5.63313e-36
NZ_AP019729.1\|WP_005864737.1\|2756427_2757057_-\|hypothetical-protein	gnl\|CDD\|273320	TIGR00883, Putative_metabolite_transport_protein, metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc. [Transport and binding proteins, Unknown substrate].	2.28689e-05
NZ_AP019729.1\|WP_008773452.1\|2766340_2767693_-\|gliding-motility-associated-protein-GldE	gnl\|CDD\|274626	TIGR03520, GldE, gliding motility-associated protein GldE. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldC is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. GldE was discovered because of its adjacency to GldD in F. johnsonii. Overexpression of GldE partially supresses the effects of a GldB point mutant suggesting that GldB and GldE interact. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Not all Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility and in fact some do not appear to express the gliding phenotype.	2.26036e-168
NZ_AP019729.1\|WP_005864721.1\|2765133_2765751_-\|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl\|CDD\|225002	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism].	1.2675e-12
NZ_AP019729.1\|WP_005864715.1\|2767718_2768228_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|273179	TIGR00621, Single-stranded_DNA-binding_protein, single stranded DNA-binding protein (ssb). All proteins in this family for which functions are known are single-stranded DNA binding proteins that function in many processes including transcription, repair, replication and recombination. Members encoded between genes for ribosomal proteins S6 and S18 should be annotated as primosomal protein N (PriB). Forms in gamma-protoeobacteria are much shorter and poorly recognized by this model. Additional members of this family include phage proteins. Eukaryotic members are organellar proteins. [DNA metabolism, DNA replication, recombination, and repair].	1.44718e-42
NZ_AP019729.1\|WP_005854625.1\|2761557_2762550_+\|PhoH-family-protein	gnl\|CDD\|376820	pfam02562, PhoH, PhoH-like protein. PhoH is a cytoplasmic protein and predicted ATPase that is induced by phosphate starvation.	1.30813e-126
NZ_AP019729.1\|WP_008773449.1\|2759458_2759830_-\|DUF2141-domain-containing-protein	gnl\|CDD\|378303	pfam09912, DUF2141, Uncharacterized protein conserved in bacteria (DUF2141). This domain, found in various hypothetical prokaryotic proteins, has no known function.	8.2595e-08
NZ_AP019729.1\|WP_048927619.1\|2762561_2763512_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|183621	PRK12607, PRK12607, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	0
NZ_AP019729.1\|WP_005864719.1\|2765752_2766334_-\|hypothetical-protein	gnl\|CDD\|132551	TIGR03512, GldD_lipo, gliding motility-associated lipoprotein GldD. Members of this protein family are found a number of Bacteriodetes lineage bacteria, including both species such as Flavobacterium johnsoniae, which possess a poorly understood form of rapid gliding motility, and other species which apparently do not. Mutation of GldD blocks both this motility and chitin utilization in the model species, Flavobacterium johnsoniae. [Cellular processes, Chemotaxis and motility].	1.98145e-37
NZ_AP019729.1\|WP_005864747.1\|2749429_2750272_+\|PepSY-like-domain-containing-protein	gnl\|CDD\|371505	pfam11396, PepSY_like, Putative beta-lactamase-inhibitor-like, PepSY-like. This family of bacterial proteins is probably periplasmic. Members are found predominantly in microbes of the human gut and oral cavity. Structurally, one member of this family is found to show similarity to the beta-lactamase-inhibitor PepSY proteins, so the overall function may be inhibitory. There are tandem repeats of the domain on many family members.	2.90519e-18
NZ_AP019729.1\|WP_121961154.1\|2750366_2752871_-\|DUF4982-domain-containing-protein	gnl\|CDD\|225789	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].	2.31681e-55

>NZ_AP019729.1|WP_008773449.1|2759458_2759830_-|DUF2141-domain-containing-protein
MRRVLFILSLFMLVCGCIEARTIIVEIGNIRGNHGNILVMAQSGKDTKPVYGMAKSEKGKVTIRLENVDWEKFDLSVFHDENENWQMDMLEGKGPAEGYVLKSCEVKDEEATFKLKLYYPVNQ
>NZ_AP019729.1|WP_048927620.1|2757075_2759454_-|TonB-dependent-receptor
MVRFLLLWLWILAIGGSSAQKISGQTVYKAHVSDAEGNAVEYATAVLLSGEKQVGGAVANSDGDFSMEAEAGKYRLVVQCLGYEPLRKELILPIKRRDSLILDLSNHVLREVVVQAKNIERKADRFIMSVMPSAGKDGTELLSQAPGVWLSDETISINGAQGTKVFVDDREIRLTGEELLAYLRSLKSEDIKRIEVIPIAGVEYEASTKGGVIKISLRRRPDNGMQGYVSLGTSLSPSLQGYIPSASVNARVGKWSLNGAVSGTFTPRDKGEINSNREYGTVGNKFVSQSLYDTDSKYGNGRVGAIFEIDSLNSVGAEIEYINQASDGTSWSQTDLVKNSYPMKSTGNYRQKDDYNTFSATVNYLREMDDRGSVFKVIADYVSKRSTGDNFHTICYEQSSWSYDTVYRSHAAADYDMATTDISFQKNLRKKMSLKIGAKYTYMLMDDHSLYEGLTSSGSWIPNEEYGYTLRYNENIVGAYASFFAEIKNWSFAAGVRAEYSKTSDRSEDFSRDYLDLFPNLGVTYAFDPIKRWMLVGQYARNIERPPFYTLNPNRIQSSDYSYQIGNPYLRPTYINRFSVTLVYNYRYTVTVGGNLHHDLIREFCKQDVANPDVSYITYENHDRENHWFVAVSLPYQPFTWCNLTGNFIGVRQDIRMTELSSFSSHYLGFANAIATFTLPAGFTVEARYSGTSRLYSGNSEVAPRHTVGVMARKKLLNDKLLLAVSVDNIFNQANEYASTLDVYRTSSRYENGLTGRVFKVALTWNFNSGKKVRKSKIEIGSGSERSRLNEK
>NZ_AP019729.1|WP_005864737.1|2756427_2757057_-|hypothetical-protein
MEDRKLSEKESLDIITQMINSSKRNMKVGSGNVLLYWGYFTVLLSVVISSLILCTQNYIWSWGWMLMFAVGPVISYKQRGCEPAVVTYTDKTISKVWQVFGCMFGLTFVLIAVFCALYGQSVNFILMLPLSLLYCGLGVSINGIILREKWMIYSPVVAFVLVIHMLMSLINHDPVTVLWYLYFGLSFVVMMIIPGHILNNKAKKQCLKN
>NZ_AP019729.1|WP_005864739.1|2756158_2756443_-|transcriptional-regulator
MFKELDPLLHSQLRLAVMSILLSVEEAEFVYIKEKTSATAGNLSVQLDKLNEAGYIEIEKGFAGKKPRTVCRITDKGRLAMEEYVNTLRQYINI
>NZ_AP019729.1|WP_008773447.1|2754796_2755996_+|threonine-ammonia-lyase
MLTLDKIYQASYALKTVIRRTDLISAPNINPESHIFLKPENLQVTGSFKVRGACFKIAQLTEEEKSHGVVACSAGNHAQGVALAATAHGIKSLICLPDNAPISKVEATKSYGADVCLVEGVYDDAYNKALQLKDEKGYTFIHPFDDEDVIAGQGTIGLELLEQLPEVEAVIIPIGGGGLISGVAYAIKNLNPNIRVYGVQAKGAPSMLNSIEHGKIERLEGVRTIADGIAVKEPGIHTFDLCQQYVDEIVSVTDDEISTAILALIEQHKLIAEGAGAVAVAAAMFNKVPIKGKKVICLISGGNIDVNILSRVIGRGLQKSGRSCSMTIELVDKPGQLQHVSEIIASTGANVVSVYHERVSHTADINGCYLRLEMETRNQQQINEIRQLLTVSGYKIVEG
>NZ_AP019729.1|WP_005854641.1|2754339_2754699_-|conjugal-transfer-protein-TraF
MVVIDLTKDGFIANVGDFEANPKDWKYIGSRPCLIDFHAPWCGYCKRLSPILDEFAKEFDGKIYIYKVDVDQEEALETAFNIRTIPTLMFCPLDGPREMMIGTMGKLELKQLIQEKLLK
>NZ_AP019729.1|WP_008773446.1|2752958_2754269_+|anaerobic-C4-dicarboxylate-transporter
MLLQLAFVLIAIIIGARIGGIGLGVLGGLGLGILTFGFGLQPTSPPIDVMLMIVAVIAAASCMQAAGGLDLMVKWAEKLLRKNPQRITILSPFVTYLFTFIAGTGHVAYSVLPVIAEVATETKIRPERPMAIAVIASQQAITASPISAATVAMLSMLSGYHISLMNILMISVPCTLLGVLAGAIYSLRVGKELDQDPEYLKRVANHEFSTKHYEAKGVENQMKAALSVSIFVLATIAIVIFGSMESLRPVFTVGTEKVSMQMSHIIEVLMLTASAFILLFTKTDGIKAAQGSVFSAGMQAVVAIFGIAWMGDTFIAGNMTELKGSIEHIVTQMPWLFGLALFVMSILLFSQAATIRALLPLGIALGISPYMLIALFPAVNGYFFIPNYPTVVAAINFDRTGTTRIGKYILNHSFMMPGLIATGVSVGLGLLFIQFI
>NZ_AP019729.1|WP_121961154.1|2750366_2752871_-|DUF4982-domain-containing-protein
MKRTSFAILIGLFCLFPALFSQVRSEFLLEKNWKFTREDRPEFINPTFNDSKWQSVTVPHDWAIYGPFSSQNDKQEVAIAQDGQTEAMEHAGRTGGLPFVGVGWYRTEFEVPQFTDGKRATILFDGAMSHAKVYVNGQEVGYWPYGYNSFYFDITKQLIPGKKNTLAVRLENLPESSRWYPGAGLYRNVHVIVTENAYIPVWGTYITTPTATKEFAKVNVQTKIVLPEGADASKYSVKTSVWNPNGQKLTEQTTPLSQIKYNDNSLSQEFIIQTPTLWSPDMPALYSAETRLYEGDQLKDLYTTPFGIRSIEIIPNKGFFLNGEKTVFKGVCNHHDLGPLGAAVNDAAIRRQIRILKDMGCNAIRTSHNMPAPELVKACDEMGMMLMAESFDEWNKAKCANGYNLIFDEWVEKDLVNLVHHYRNNPSVVMWCVGNEVPNQWDESGCKISRFLQDICHREDPTRPVTQGMDAPDAVVNNNMAAVMDVAGFNYRPFRYQVNYKKLPQQIILGSETASTVSSRGVYKFPVERKAMAVYEDHQSSSYDVEHCNWSNLPEDDFIQHEDLPYCIGEFVWTGFDYLGEPTPYYTNWPSHSSLFGIIDLAGIPKDRYYLYRSHWNKSAKTLHILPHWTWPGREGEVTPVFVYTNYPSAELFINGKSQGKRTKDLSIGIDSSYTEAAQKSFERQKRYRLMWMDTKYEPGTLKVVAYDKEGNAVAEEEVHTAGKPHHIELSADRNQLTADGKDLSFINVRVVDKNGNLCPDDTRQIQFKVRGAGAYRAAANGNSASLELFHLPEMKLFSGQLTAIVQTAEEPGTIYFEASAPGVKGATLELISK
>NZ_AP019729.1|WP_005864747.1|2749429_2750272_+|PepSY-like-domain-containing-protein
MNTRLILFTCIAGLTLFFSGCSKNDDDHQGIIPLPPVENAFQEKYPDAKNPVFEIEGNYYVVDFNNEGSETTAWFTDQGVWMMEKIDISFAQLPAAVSTAFKQGFYSNWTVDDTYAINRLNMGIVYKIEAEQSNSEVDLYYSQYGNLIKAVDDEINNDAPIVIPKEVSNLMEITFANAELLDIQQNSLGYELDMIDNQIYKVAQLNKDYRWQSTTWAMSEQEVPQIVMQGFESSAYASDKVQSIYTLLNANGTFYLFKVSHNGQDETITFDVFGNIVKPE
>NZ_AP019729.1|WP_005864748.1|2748001_2749246_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MDREISKEVRQKEQRKQFIKLGAGIGIAVVLIGGVIGFMQTSLQRKDLVFSTVDKGVIEVSVSASGKVVPAFEEIINSPINSRIVEIYKKGGDSVDVGTPILKLDLLSAETDYKKQLDEEQMKRLQLDQLRIQNRNKLSEMEMQLKVSRMELNRKEVELRNERYLDSLGAGTTDKVRQVELDYNVSVLKLKEDEQKYENEKSLTDADYKVKELDLNIFRKSLAETKRTLEDAQIRSPRKAILTYVNNEVGAQVSQGSRVAIVSDLSHFKIEGEIADTYGDRIAAGSKAVVKIGNDKLDGVVSDVTPLSKNGVISFTVQLEEDNHRRLRSGLKTDVYVMNAIKDDVLRISNASFYVGKGEYELFVVNGNQLIKRKVQLGDSNFEYVEVVNGLEPGDEVVVSDMTSFKEKNKLKLK
>NZ_AP019729.1|WP_005864731.1|2760163_2760691_+|O-acetyl-ADP-ribose-deacetylase
MNERIIAIQADITTLDVDAIVNAANNSLLGGGGVDGAIHWAAGPELLDECRTLQGCPTGEAKITKGYRLKARHVIHTVGPIYRNGQHGEPELLENCYRNSLRLAKENRLRTIAFPSISTGVYGYPIEEAAQIAIRTIDTFLKENPEIQQVTMCCFSGYDKSVYTKALEQITTHEP
>NZ_AP019729.1|WP_008773450.1|2760671_2761331_-|hypothetical-protein
MKMKTVFNVMLLLVVIVSATAFSSCKEKRGELKKIWYNGSYNRDFNDLNDVHLSVAKKIGIEPVSSREGAEHASRDMVEIKTNDYYEVEELTHSIPYLVPEAANLLEDIGKNFQDSLKNLNASIYKIKVTSVTRTVADVKKLRKRNTNSSLNSAHQYGTTFDVSWVRYTKIDEKDTLNIDKDRLKMVLASVLRDLRRADRCYIKHERKQGCFHITAREL
>NZ_AP019729.1|WP_005854625.1|2761557_2762550_+|PhoH-family-protein
MIERIYILESVDPVIFYGVNNSNMQLIKTLFPKLRIVARGNVMKVIGDEDESELFLKKIREVEKYCEEFNSLSEDVILDIIKGKGPTVVKQENLIIHGMNGKPITARTENQQLLVKAFENNDLVFATGPAGSGKTFVAIALAVKALKNKEVRKIILSRPAVEAGEKLGFLPGEMKDKLDPYLQPLYDALQDMIPAAKLKEYMENNVIQIAPLAFMRGRTLNDAVIILDEAQNTTTHQIKMFLTRLGMNAKMIVTGDVTQIDLPPSTTSGLIQAMQILKGVNGIGKIEFTKKDIVRHKLVQRIVEAYDKFDDKRKKEIKEAKEKKTNIDNN
>NZ_AP019729.1|WP_048927619.1|2762561_2763512_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MKKALVKTDFNFPRQKSVYHGKVRDVYNINDDVLVMVATDRISAFDVILPEGIPYKGQMLNQIAAKFLDATTDICPNWKMATPDPMVTVGVQCQGFPVEMIVRGYLCGSAWRAYKSGVREICGVKLPEGMRENQRFPEPIITPTTKAEIGEHDQDISKEEILAKGLVSKEDYEVLEKYTMALFKRGTEIAKERGLILVDTKYEFGHRDGKIYLIDEIHTPDSSRYFYSEGYEDRFAKGEPQKQLSKEFVREWLMENGFQGKSGQKVPEMTPEIVEGISNRYIELFEHITGETFVKGETDNLLNRIEKNVTEYLQNK
>NZ_AP019729.1|WP_008773451.1|2763522_2764266_+|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE
MTQYGSETILPYNKEEQKGTQVKRMFDSIAETYDQLNHTLSFGIDKIWRRKGIAFLRPFSPKTILDIATGTGDLAISMYKKLRPDHIVGADISLGMMEVGRKKVAAAGYSEYISFEQQDCTALTYEENSFDAVTAAFGVRNFENIEQGISEMYRVLKPGGHIMILELSTPEHFPMRQLYQIYSKTVIPFIGRLLSKEKVAYNYLPASIKVVPQGKVMTDLLTRQGFKQARVRTFTFGICSLYTGSKE
>NZ_AP019729.1|WP_005854619.1|2764280_2765024_+|shikimate-dehydrogenase
MQKYGLLGYPLGHSFSKTYFNQKFEAEKIDAEYLNFEIPSIKEIKNVIKENPELNGLNVTIPYKEQVIPYLDDLDDDARQIGAVNVIKFTKGLFGKLKLKGYNSDIIGFKQSIDPLLKETHRKALILGTGGASKAVFHGLKQLGVGATLVSRKPKEFCITYDEITPKTMEQYTVIVNTTPLGMFPNIDSCPDIPYDLLTPNHLLYDLLYNPDETLFMKKGKEKGAVVKNGLEMLLLQAFAAWEIWQK
>NZ_AP019729.1|WP_005864721.1|2765133_2765751_-|4'-phosphopantetheinyl-transferase-superfamily-protein
MALLYKQLSPLHGVWKMEESSDELLGMLEHKADYSSFLERVSAEKRRQERFASRVLLKELLGEEVRVDYHSTGAPFLACVPLYISISHTKDYVAVILDKRPTGIDIEYRSDRILKIRSRFMNPEEEAGIDLEHEVEHLLIHWCAKETLFKIIGQEGVDFQKHLHVNPFPYLSSGTFKGRETRTEACREYELAYQVTPDYVLTWLK
>NZ_AP019729.1|WP_005864719.1|2765752_2766334_-|hypothetical-protein
MKWIAAVIGGSLFLGICCISCVEYTPKPRGYVRIEPSKAQYKPLDLSYLPFNFDVSQTAVIEVPDQKKGVTGLNISYPELEAKLYCSYLPITPASLVTVETESRSFVARQIKSENRISEKAYSNPAANVYGSLFLLDGESASPIQFLLTDSVSNFFRGALYFDCKPNADSLAPAIQYIREDIIELIQTFSWKE
>NZ_AP019729.1|WP_008773452.1|2766340_2767693_-|gliding-motility-associated-protein-GldE
MDSDYYLSGLFENVTVQALTAGPVIALSLAFLLLFVSGFVSASEVAFFSLTPGDLNEIGEENRPADPVIKRLLERSEYLLASILIANNFVNVAVVMLCTYAINAWINFSAAPLLGFVLETILLTFLLLLFGEIMPKIYAQKNSLRFVRFSASVLSGLERFCRPFSKILVNSTSVINKALAKKKYDISVDELSKALELTSTEIPEEKEMLAEIIKFYNKTADEIMTPRLDMEDIEIKISFREVVDFIIKSGYSRIPVYSETEDNIKGILYIKDLLPYIDKPDTFRWQSLIRPAYFVPETKKIDDLLEEFRTNKIHMAIVVDEFGGTSGIVTMEDILEEIVGEISDEYDEDEQQFIRLADGSLIFEAKILLTDFFRVIDADPSDFGKLTEEVETLAGLLLEIKGDFPRRREIIDFKEYRFQVLEVDNRRILKVKFNRIPEGTGNDENGKDTK
>NZ_AP019729.1|WP_005864715.1|2767718_2768228_-|single-stranded-DNA-binding-protein
MSLNKVILIGNVGKDPDVRYFDSGAAVANFPLATSERGYTLANGTVVPERTEWHNIVVRRDLVPFVEKWVRKGSGVYVEGKIRTRNYDDQSGVKRYVTEIHADRIEFYSTGSRPADGGNTTAQGGSMQPNVGQGQSAQPTTAPNTAYQQPAASQPSAFSESSDADDLPF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

333902 : 368125

uncultured_phage(33.33%)

integrase,transposase,holin,tRNA

attL 332954:332969|attR 366245:366260

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
332954:332969	attL	NA	NA	NA	NA
WP_005861832.1\|333902_334826_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_005861834.1\|334895_335897_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_005865964.1\|336082_336457_-	hypothetical protein	NA	NA	NA	NA
WP_005861838.1\|336416_336824_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_005861840.1\|336831_337053_-	YtxH domain-containing protein	NA	NA	NA	NA
WP_121960996.1\|337142_337994_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_121960995.1\|338072_338519_-	N-acetylmuramoyl-L-alanine amidase	D6QWP6	uncultured_phage	6.7e-23	38.8
WP_005861849.1\|338837_338936_-	smalltalk protein	NA	NA	NA	NA
WP_122297357.1\|339224_339722_-	DsbA family protein	NA	NA	NA	NA
WP_034527861.1\|339949_340189_+	DUF4248 domain-containing protein	NA	NA	NA	NA
WP_122297358.1\|340413_342219_-	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_122297359.1\|342246_342879_-	virulence protein E	NA	NA	NA	NA
WP_122297360.1\|343022_343955_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	9.8e-08	24.6
WP_122297361.1\|344471_345593_+	transcriptional regulator	NA	NA	NA	NA
WP_122297362.1\|345646_346048_+	hypothetical protein	NA	NA	NA	NA
WP_172618146.1\|346062_346200_+	hypothetical protein	NA	NA	NA	NA
WP_008774046.1\|346202_346346_+	hypothetical protein	NA	NA	NA	NA
WP_122297363.1\|346363_347488_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_121960988.1\|348201_348459_+\|transposase	transposase	NA	NA	NA	NA
WP_121960987.1\|348811_350362_+	sugar transporter	NA	NA	NA	NA
WP_121960986.1\|350362_351379_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_121960985.1\|351405_352587_+	oligosaccharide repeat unit polymerase	NA	NA	NA	NA
WP_121960984.1\|352579_353518_+	glycosyltransferase	NA	NA	NA	NA
WP_121960983.1\|353514_354615_+	glycosyltransferase	NA	NA	NA	NA
WP_121960982.1\|354661_355429_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_121961003.1\|355431_356664_+	NAD(P)-binding protein	NA	NA	NA	NA
WP_154396217.1\|356857_357016_+	hypothetical protein	NA	NA	NA	NA
WP_121960981.1\|357036_358167_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_005861905.1\|358166_358502_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_005861907.1\|358723_359041_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_005861909.1\|359063_359330_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_008774031.1\|359486_360893_+	amidophosphoribosyltransferase	NA	NA	NA	NA
WP_048928057.1\|360949_362170_+	peptidase T	NA	NA	NA	NA
WP_005861915.1\|362183_363269_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA
WP_005861917.1\|363352_363940_-	DUF4251 domain-containing protein	NA	NA	NA	NA
WP_048928058.1\|364106_365120_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_121960980.1\|365180_365558_+\|transposase	transposase	NA	NA	NA	NA
WP_095231420.1\|365566_366547_+\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	7.6e-19	28.2
366245:366260	attR	NA	NA	NA	NA
WP_007750450.1\|366835_368125_-\|transposase	IS1380-like element IS614 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

646699 : 720371

unidentified_phage(33.33%)

integrase,transposase

attL 662600:662615|attR 714535:714550

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007855296.1\|646699_647929_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.9e-22	30.4
WP_007855297.1\|647942_649163_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.1e-14	26.8
WP_032951146.1\|649184_649559_+	hypothetical protein	NA	NA	NA	NA
WP_117589642.1\|649570_649816_-	hypothetical protein	NA	NA	NA	NA
WP_007855300.1\|649905_650211_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_022199349.1\|650264_650576_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_007855302.1\|650991_651477_+	DUF3408 domain-containing protein	NA	NA	NA	NA
WP_007855303.1\|651685_652075_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_007855304.1\|652071_652998_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_007855305.1\|653000_653636_+	hypothetical protein	NA	NA	NA	NA
WP_007855306.1\|653709_654405_-	macro domain-containing protein	W8CZK3	Erwinia_phage	3.7e-20	37.1
WP_007855307.1\|654415_658900_-	DUF4433 domain-containing protein	NA	NA	NA	NA
WP_007855308.1\|658901_663101_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
662600:662615	attL	NA	NA	NA	NA
WP_007855309.1\|663114_663327_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_048927810.1\|664131_667575_+	alpha-L-rhamnosidase	NA	NA	NA	NA
WP_008779618.1\|667890_669279_+	polyamine ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.3e-37	41.9
WP_036644173.1\|669318_670089_+	ABC transporter permease	NA	NA	NA	NA
WP_029257232.1\|670085_670877_+	ABC transporter permease	NA	NA	NA	NA
WP_048927860.1\|670883_672221_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_048927812.1\|672222_672837_+	HAD family phosphatase	NA	NA	NA	NA
WP_005858047.1\|672862_673543_-	queuosine precursor transporter	NA	NA	NA	NA
WP_008774273.1\|673604_674267_-	DUF2490 domain-containing protein	NA	NA	NA	NA
WP_008774274.1\|674381_675263_+	TIM barrel protein	NA	NA	NA	NA
WP_005866389.1\|675488_675740_+	RNA polymerase	NA	NA	NA	NA
WP_005858035.1\|675843_676524_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.2e-35	38.3
WP_048927813.1\|676619_678944_+	ABC transporter permease	NA	NA	NA	NA
WP_008774279.1\|678969_681327_+	ABC transporter permease	NA	NA	NA	NA
WP_122297406.1\|681692_684059_+	ABC transporter permease	NA	NA	NA	NA
WP_005858025.1\|684045_685392_-	sodium:glutamate symporter	NA	NA	NA	NA
WP_048927815.1\|685479_686370_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_121961054.1\|686472_687774_+	hypothetical protein	NA	NA	NA	NA
WP_121961055.1\|687806_689552_+	class I mannose-6-phosphate isomerase	NA	NA	NA	NA
WP_057317028.1\|689698_690802_+	ROK family protein	NA	NA	NA	NA
WP_121961056.1\|690798_693168_+	glycoside hydrolase family 92 protein	NA	NA	NA	NA
WP_048927817.1\|693157_694300_+	MFS transporter	NA	NA	NA	NA
WP_048927818.1\|694301_697190_+	glycosyl hydrolase family 38	NA	NA	NA	NA
WP_048927828.1\|697916_701108_+	TonB-dependent receptor	NA	NA	NA	NA
WP_048927827.1\|701135_702743_+	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA
WP_121961057.1\|702845_703196_+	hypothetical protein	NA	NA	NA	NA
WP_005790860.1\|704619_705855_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_005790858.1\|705867_706230_+	hypothetical protein	NA	NA	NA	NA
WP_003013274.1\|706444_707776_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_003013276.1\|707780_708782_+	hypothetical protein	NA	NA	NA	NA
WP_003013280.1\|708939_709239_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003013282.1\|709238_710285_+	AAA family ATPase	Q5ZGH5	Flavobacterium_phage	7.1e-23	28.0
WP_005790855.1\|710355_711309_+	toprim domain-containing protein	NA	NA	NA	NA
WP_003013287.1\|711379_711742_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_003013289.1\|711722_712634_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_003013290.1\|712638_713313_+	hypothetical protein	NA	NA	NA	NA
WP_003013318.1\|713609_714473_-	aminoglycoside 6-adenylyltransferase AadS	NA	NA	NA	NA
WP_008651082.1\|714648_715815_-	tetracycline-inactivating monooxygenase Tet(X)	NA	NA	NA	NA
714535:714550	attR	NA	NA	NA	NA
WP_005790841.1\|715983_717123_-	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_007750450.1\|717573_718863_-\|transposase	IS1380-like element IS614 family transposase	NA	NA	NA	NA
WP_007565353.1\|719240_720371_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

913032 : 922347

Synechococcus_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008772422.1\|913032_914493_+	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	3.7e-38	27.2
WP_005857714.1\|914497_915964_+	glucose-6-phosphate dehydrogenase	E3SJC5	Synechococcus_phage	6.8e-88	41.4
WP_036628751.1\|915968_916670_+	6-phosphogluconolactonase	NA	NA	NA	NA
WP_122268703.1\|916863_917271_+\|transposase	transposase	NA	NA	NA	NA
WP_122297237.1\|917228_918131_+\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	7.5e-21	31.9
WP_036615697.1\|918579_919104_+	hypothetical protein	K4JW05	Caulobacter_phage	2.9e-17	37.6
WP_008772418.1\|919192_920068_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	4.6e-108	65.6
WP_008772417.1\|920093_921170_+	GDP-L-fucose synthase	M4R1H4	Synechococcus_phage	8.2e-83	47.0
WP_048928227.1\|921195_922347_+	GDP-mannose 4,6-dehydratase	A0A0E3F1J3	Synechococcus_phage	2.5e-122	62.6

DBSCAN-SWA_4

1169614 : 1181505

unidentified_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_121960823.1\|1169614_1170979_-	hypothetical protein	H7BUJ9	unidentified_phage	5.4e-140	55.5
WP_121960822.1\|1170960_1171557_-	hypothetical protein	NA	NA	NA	NA
WP_172618176.1\|1171534_1172050_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_121960820.1\|1172121_1172376_-	hypothetical protein	NA	NA	NA	NA
WP_121960819.1\|1172372_1172855_-	hypothetical protein	E9P621	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	1.9e-07	33.6
WP_121960818.1\|1172847_1175181_-	SMC family ATPase	H7BUK0	unidentified_phage	4.5e-110	34.4
WP_121960817.1\|1175184_1176225_-	phosphoesterase	M4SN99	Cellulophaga_phage	2.2e-24	25.6
WP_121960816.1\|1176226_1177003_-	helix-turn-helix transcriptional regulator	A0A0K2CZE3	Paenibacillus_phage	1.4e-20	45.2
WP_121960815.1\|1177088_1178378_-	hypothetical protein	H7BUK1	unidentified_phage	1.7e-74	45.0
WP_121960814.1\|1178403_1178946_-	hypothetical protein	NA	NA	NA	NA
WP_121960813.1\|1178982_1181505_-	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	A0A0A0UZT5	uncultured_virus	3.0e-91	40.6

DBSCAN-SWA_5

2254586 : 2262252

Catovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005867974.1\|2254586_2255216_+	master DNA invertase Mpi family serine-type recombinase	H2A0H0	Bacteroides_phage	7.0e-50	54.8
WP_005867972.1\|2255440_2255902_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.2e-21	42.7
WP_005867971.1\|2256097_2257288_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_129984385.1\|2257284_2258445_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	7.4e-29	30.6
WP_129984386.1\|2258474_2259680_-	UDP-N-acetyl-D-mannosamine dehydrogenase	A0A127AXI2	Bacillus_phage	3.0e-25	26.2
WP_008778250.1\|2259781_2260660_-	glycosyltransferase family 2 protein	A0A0U4AZ25	Gordonia_phage	8.9e-19	34.0
WP_005867967.1\|2260667_2261279_-	DUF1919 domain-containing protein	NA	NA	NA	NA
WP_005867966.1\|2261286_2262252_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	3.7e-10	32.5

DBSCAN-SWA_6

3162386 : 3231931

Bacillus_virus(18.18%)

transposase,tail,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005867105.1\|3162386_3163619_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.4e-115	52.7
WP_121961089.1\|3163640_3164303_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	3.7e-41	46.7
WP_005853929.1\|3164492_3165845_-	trigger factor	NA	NA	NA	NA
WP_005867102.1\|3165988_3166876_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_005853924.1\|3166870_3167623_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-22	28.5
WP_121961090.1\|3167707_3168823_-	family 43 glycosylhydrolase	NA	NA	NA	NA
WP_008773770.1\|3168998_3169745_+	ABC transporter permease	NA	NA	NA	NA
WP_048928523.1\|3169747_3170518_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	2.2e-29	35.4
WP_005867099.1\|3170632_3171919_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.2e-106	49.0
WP_008778718.1\|3172107_3172302_-	hypothetical protein	NA	NA	NA	NA
WP_005867096.1\|3172332_3172791_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_005853911.1\|3172801_3173851_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_005867095.1\|3173863_3174571_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_005867094.1\|3174574_3175375_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_005853907.1\|3175371_3175611_-	DUF3098 domain-containing protein	NA	NA	NA	NA
WP_005853905.1\|3175638_3176517_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_005867093.1\|3176684_3177107_-	PIN domain-containing protein	NA	NA	NA	NA
WP_005853901.1\|3177107_3177260_-	hypothetical protein	NA	NA	NA	NA
WP_141806894.1\|3177437_3182783_-	Ig-like domain-containing protein	B8QTT6	Erwinia_phage	5.8e-12	54.1
WP_048928546.1\|3182803_3186391_-	hypothetical protein	NA	NA	NA	NA
WP_009017957.1\|3187542_3188181_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_009017956.1\|3188177_3188510_-	hypothetical protein	NA	NA	NA	NA
WP_048928521.1\|3188657_3190031_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_048928520.1\|3190291_3190747_+	hypothetical protein	NA	NA	NA	NA
WP_048928519.1\|3190848_3192345_+	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_005867080.1\|3192394_3192679_+	hypothetical protein	NA	NA	NA	NA
WP_005867078.1\|3192951_3194139_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_005867077.1\|3194147_3195035_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_005867076.1\|3195050_3195803_+	phosphate ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	4.0e-20	32.2
WP_005853873.1\|3195834_3196509_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_034532078.1\|3196549_3197764_+	OprO/OprP family phosphate-selective porin	NA	NA	NA	NA
WP_048928545.1\|3197824_3200254_-	glycoside hydrolase family 95 protein	NA	NA	NA	NA
WP_005853867.1\|3200336_3202184_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.6e-57	34.6
WP_048928518.1\|3202313_3203156_+	radical SAM-associated putative lipoprotein	NA	NA	NA	NA
WP_008773789.1\|3203159_3203630_+	radical SAM-associated putative lipoprotein	NA	NA	NA	NA
WP_008779916.1\|3203633_3204710_+	TIGR04133 family radical SAM/SPASM protein	NA	NA	NA	NA
WP_008778726.1\|3204767_3206543_+	DUF4091 domain-containing protein	NA	NA	NA	NA
WP_048928517.1\|3206719_3209071_+	glycoside hydrolase family 3 C-terminal domain-containing protein	NA	NA	NA	NA
WP_048928516.1\|3209130_3209724_-	hypothetical protein	NA	NA	NA	NA
WP_048928515.1\|3210809_3211106_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_048928514.1\|3211095_3211464_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_022192261.1\|3211534_3211837_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_048928513.1\|3211829_3212168_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_141806895.1\|3212183_3212912_+	hypothetical protein	NA	NA	NA	NA
WP_122297237.1\|3213121_3214024_-\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	7.5e-21	31.9
WP_122268703.1\|3213981_3214389_-\|transposase	transposase	NA	NA	NA	NA
WP_141806896.1\|3214734_3215196_+	hypothetical protein	NA	NA	NA	NA
WP_048928511.1\|3215515_3216367_+	hypothetical protein	NA	NA	NA	NA
WP_005867049.1\|3216481_3216688_+	hypothetical protein	NA	NA	NA	NA
WP_044545263.1\|3216687_3216963_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_008773802.1\|3217015_3218329_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_008773803.1\|3218353_3219244_-	GTPase Era	NA	NA	NA	NA
WP_008779906.1\|3219227_3220232_-	ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_005634607.1\|3220335_3220521_-	50S ribosomal protein L32	NA	NA	NA	NA
WP_048928510.1\|3220533_3221124_-	DUF177 domain-containing protein	NA	NA	NA	NA
WP_048928509.1\|3221212_3222370_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_022191828.1\|3228530_3229067_+	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_005867037.1\|3229157_3229913_+	hypothetical protein	NA	NA	NA	NA
WP_005867035.1\|3229932_3231441_+\|tail	phage tail sheath family protein	A0A142EZL9	Stenotrophomonas_phage	1.5e-10	31.1
WP_005861441.1\|3231478_3231931_+\|tail	phage tail protein	A0A059XEM3	uncultured_phage	1.8e-23	45.1

DBSCAN-SWA_7

4034434 : 4067303

Yellowstone_lake_phycodnavirus(16.67%)

tail,transposase,integrase,tRNA

attL 4038028:4038042|attR 4054026:4054040

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005863685.1\|4034434_4035313_+\|tail	tail fiber domain-containing protein	A0A0P0YNI2	Yellowstone_lake_phycodnavirus	3.4e-10	33.3
WP_129984315.1\|4035403_4036342_+	glycosyltransferase	NA	NA	NA	NA
WP_011967117.1\|4036375_4037557_+\|tail	tail fiber domain-containing protein	E5EQB0	Micromonas_sp._RCC1109_virus	5.8e-05	44.0
WP_008778959.1\|4037604_4037991_+	hypothetical protein	NA	NA	NA	NA
4038028:4038042	attL	NA	NA	NA	NA
WP_121737493.1\|4044292_4044703_+	hypothetical protein	NA	NA	NA	NA
WP_121960720.1\|4045457_4046141_+	hypothetical protein	NA	NA	NA	NA
WP_121960719.1\|4047218_4047608_+	barstar family protein	NA	NA	NA	NA
WP_121960718.1\|4048186_4049764_+	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA
WP_005860303.1\|4049948_4050653_+	hypothetical protein	NA	NA	NA	NA
WP_048927172.1\|4050914_4052147_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	7.1e-30	37.2
WP_048927171.1\|4052169_4052559_+	hypothetical protein	NA	NA	NA	NA
WP_054350315.1\|4052759_4054001_+	helicase	NA	NA	NA	NA
WP_048927169.1\|4054275_4055253_+	toprim domain-containing protein	NA	NA	NA	NA
4054026:4054040	attR	NA	NA	NA	NA
WP_048927168.1\|4055469_4056774_+	plasmid recombination protein	NA	NA	NA	NA
WP_048927233.1\|4057167_4057995_+	class A beta-lactamase	NA	NA	NA	NA
WP_009016772.1\|4058395_4058800_+	PH domain-containing protein	NA	NA	NA	NA
WP_005860301.1\|4058810_4060157_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
WP_048926959.1\|4060193_4060919_+	DUF4271 domain-containing protein	NA	NA	NA	NA
WP_029257164.1\|4060915_4061671_+	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_009016771.1\|4061670_4062057_+	ribonuclease P protein component	NA	NA	NA	NA
WP_005863660.1\|4062056_4062278_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.4e-15	51.5
WP_048926960.1\|4062261_4062933_+	TatD family hydrolase	NA	NA	NA	NA
WP_008778966.1\|4063036_4064329_+\|tRNA	tyrosine--tRNA ligase	A0A1L2CUL7	Pectobacterium_phage	1.5e-67	37.8
WP_016270043.1\|4064587_4065571_-\|transposase	transposase	NA	NA	NA	NA
WP_141806985.1\|4065536_4065992_-	hypothetical protein	NA	NA	NA	NA
WP_122268703.1\|4066035_4066443_+\|transposase	transposase	NA	NA	NA	NA
WP_122297237.1\|4066400_4067303_+\|transposase	IS3 family transposase	A0A1B3AZE5	Gordonia_phage	7.5e-21	31.9

Anti-CRISPR protein detection

Acr_ID: NZ_AP019729.1|WP_005790760.1|754908_755331_-|PcfK-like-family-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_AP019729.1|WP_005790760.1|754908_755331_-|PcfK-like-family-protein

754908_755331_-

140 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5673758865248227	1	1.0

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP019729

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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