CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_AP019693	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence	0 crisprs	NA	0	0
NZ_AP019694	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-2, complete sequence	0 crisprs	NA	0	0
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	3 crisprs	PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	47	12

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP019692_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019692_1

84173-84267

Unclear

Consensus_repeat	Method
ACCGGGTCTACTGGCTCAGGGTCTAC	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_AP019692_1

>merge|NZ_AP019692|1|84173-84267|CRISPRCasFinder
ACCGGGTCTACTGGCTCAGGGTCTACTGGATCAGGGTCCACCGGATCGGGAATAACAGGGTCAGGGATAACCGGGTCTACTGGATCAGGGTCTAC

>NZ_AP019692|1|1|84173-84267|CRISPRCasFinder
ACCGGGTCTACTGGCTCAGGGTCTAC	TGGATCAGGGTCCACCGGATCGGGAATAACAGGGTCAGGGATA
ACCGGGTCTACTGGATCAGGGTCTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019692.1\|WP_001651036.1\|92542_94252_-\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|282957
NZ_AP019692.1\|WP_000106461.1\|80250_80931_-\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|238494
NZ_AP019692.1\|WP_000834259.1\|88727_90110_+\|glycoside-pentoside-hexuronide-family-transporter	unknown	unknown	gnl\|CDD\|183145
NZ_AP019692.1\|WP_000462256.1\|95991_97197_+\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|129314
NZ_AP019692.1\|WP_024146432.1\|74179_75082_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_AP019692.1\|WP_001278062.1\|81715_82573_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|226233
NZ_AP019692.1\|WP_023205354.1\|75587_76283_+\|MgtC-family-protein	unknown	unknown	gnl\|CDD\|185283
NZ_AP019692.1\|WP_000749539.1\|73195_74137_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_AP019692.1\|WP_001082117.1\|79249_79342_+\|protein-MgtR	unknown	unknown	unknown
NZ_AP019692.1\|WP_001541135.1\|81549_81663_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019692.1\|WP_001068436.1\|100140_100830_-\|tRNA-(guanosine(18)-2'-O)-methyltransferase-TrmH	unknown	unknown	gnl\|CDD\|236837
NZ_AP019692.1\|WP_000115428.1\|94372_95764_-\|xanthine/proton-symporter-XanP	unknown	unknown	gnl\|CDD\|273276
NZ_AP019692.1\|WP_001651032.1\|98053_100135_-\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NZ_AP019692.1\|WP_023205349.1\|90121_92440_+\|alpha-xylosidase	unknown	unknown	gnl\|CDD\|236731
NZ_AP019692.1\|WP_000984809.1\|86069_86687_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225360
NZ_AP019692.1\|WP_001521985.1\|82583_83048_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019692.1\|WP_000280481.1\|100834_102946_-\|bifunctional-GTP-diphosphokinase/guanosine-3',5'-bis-pyrophosphate-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236843
NZ_AP019692.1\|WP_023205353.1\|76501_79228_+\|magnesium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|237914
NZ_AP019692.1\|WP_021000918.1\|79542_80022_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019692.1\|WP_001651033.1\|97199_98051_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP019692.1\|WP_001651036.1\|92542_94252_-\|AsmA-family-protein	gnl\|CDD\|282957	pfam05170, AsmA, AsmA family. The AsmA gene, whose product is involved in the assembly of outer membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis.	3.38981e-21
NZ_AP019692.1\|WP_000106461.1\|80250_80931_-\|isochorismatase-family-protein	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	3.05871e-58
NZ_AP019692.1\|WP_000834259.1\|88727_90110_+\|glycoside-pentoside-hexuronide-family-transporter	gnl\|CDD\|183145	PRK11462, PRK11462, putative transporter; Provisional.	0
NZ_AP019692.1\|WP_000280481.1\|100834_102946_-\|bifunctional-GTP-diphosphokinase/guanosine-3',5'-bis-pyrophosphate-3'-pyrophosphohydrolase	gnl\|CDD\|236843	PRK11092, PRK11092, bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase.	0
NZ_AP019692.1\|WP_024146432.1\|74179_75082_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	8.41315e-51
NZ_AP019692.1\|WP_001278062.1\|81715_82573_+\|transcriptional-regulator	gnl\|CDD\|226233	COG3710, CadC, DNA-binding winged-HTH domains [Transcription].	6.25098e-40
NZ_AP019692.1\|WP_023205354.1\|75587_76283_+\|MgtC-family-protein	gnl\|CDD\|185283	PRK15385, PRK15385, MgtC family protein.	2.57769e-154
NZ_AP019692.1\|WP_000749539.1\|73195_74137_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	3.2425e-146
NZ_AP019692.1\|WP_000462256.1\|95991_97197_+\|sodium/glutamate-symporter	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_AP019692.1\|WP_001068436.1\|100140_100830_-\|tRNA-(guanosine(18)-2'-O)-methyltransferase-TrmH	gnl\|CDD\|236837	PRK11081, PRK11081, tRNA guanosine-2'-O-methyltransferase; Provisional.	2.80076e-177
NZ_AP019692.1\|WP_000115428.1\|94372_95764_-\|xanthine/proton-symporter-XanP	gnl\|CDD\|273276	TIGR00801, Uric_acid_permease, uracil-xanthine permease. The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40) Most of the functionally characterized members of the NCS2 family are transporters specific for nucleobases including both purines and pyrimidines. However, two closely related rat members of the family, SVCT1 and SVCT2, localized to different tissues of the body, cotransport L-ascorbate and Na+ with a high degree of specificity and high affinity for the vitamin. The NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39). [Transport and binding proteins, Nucleosides, purines and pyrimidines].	2.19228e-145
NZ_AP019692.1\|WP_001651032.1\|98053_100135_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_AP019692.1\|WP_000984809.1\|86069_86687_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225360	COG2771, CsgD, DNA-binding HTH domain-containing proteins [Transcription].	0.00146241
NZ_AP019692.1\|WP_023205349.1\|90121_92440_+\|alpha-xylosidase	gnl\|CDD\|236731	PRK10658, PRK10658, putative alpha-glucosidase; Provisional.	0
NZ_AP019692.1\|WP_023205353.1\|76501_79228_+\|magnesium-translocating-P-type-ATPase	gnl\|CDD\|237914	PRK15122, PRK15122, magnesium-transporting ATPase; Provisional.	0

>NZ_AP019692.1|WP_001521985.1|82583_83048_+|hypothetical-protein
MLACLTLLFLGVGLGHLFHLYTEKNRDPEKCTAPVIVFYNNTQANLTLDFMYSLKKRTGVVSISGTYYVDNKMSGVIRRDVSYVWSENKDSTHFISTDINKVTRDETLSDAVIETVLPDFYVYPGKSISYTILTQGHRGFMFTIGKRPIFFCTH
>NZ_AP019692.1|WP_001278062.1|81715_82573_+|transcriptional-regulator
MSCYAATASDYTQWCLLTLSNYVMFWHGNNAMLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVVSQQTFFQKVWEEDGMVVSANTLYQNISIIRRGLRTVGENEDTLIITVPRRGFQIEPGVSLMTIRKDFAQAIEKKGETPPRMSGRWFKHYVPVLWMTGTFAVGILLGTISWQTVPDKDFYDRYTLVETTQGCHFFSRNEDIESGSRFASYKSMILKTGMDCQKYPWVYFPSSSRTPAVTALICQQPYKTRGDTGCVTLFFRGVTHG
>NZ_AP019692.1|WP_001541135.1|81549_81663_+|hypothetical-protein
MIFSPQYKTGDLTNKKTKRTFTPESAIMRKAVSTLTC
>NZ_AP019692.1|WP_000106461.1|80250_80931_-|isochorismatase-family-protein
MSTPANFNGQRPAIDANDAVMLLIDHQSGLFQTVGDMPMPELRARAAALAKIATLCNMPVITTASVPQGPNGPLIPEIHANAPHAQYVARKGEINAWDNADFVQAVKATGRKTLIIAGTITSVCMAFPAISAVAEGYKVFAVIDASGTYSKMAQEITMARVVQAGVVPMDTAAVASELQRTWNREDAAEWADVYTKIFPAYQLLIESYTKAQEVVKNNELLDSQRA
>NZ_AP019692.1|WP_021000918.1|79542_80022_+|hypothetical-protein
MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEHRKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLTRGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
>NZ_AP019692.1|WP_001082117.1|79249_79342_+|protein-MgtR
MNRSPDKIIALIFLLISLLVLCLALWQIVF
>NZ_AP019692.1|WP_023205353.1|76501_79228_+|magnesium-translocating-P-type-ATPase
MTDMNIENRKLNRPASENDKQHKKVFPIEAEAFHSPEETLARLNSHRQGLTIEEASERLKVYGRNEVAHEQVPPVLVQLLQAFNNPFIYVLMALAGVSFITDYWLPLRRGEETDLTGVLIILTMVSLSGLLRFWQEFRTNRAAQALKKMVRTTATVLRRGPGNIGAVQEEIPIEELVPGDVVFLAAGDLVPADVRLLASRDLFISQSILSGESLPVEKYDVMADVAGKDSEQLPDKDKSLLDLGNICLMGTNVTSGRAQAVVVATGSRTWFGSLAKSIVGTRTQTAFDRGVNSVSWLLIRFMLIMVPVVLLINGFSKGDWVEASLFALAVAVGLTPEMLPMIVSSNLAKGAIAMSRRKVIVKRLNAIQNFGAMDVLCTDKTGTLTQDNIFLEHHLDVSGVKSSRVLMLAWLNSSSQSGARNVMDRAILRFGEGRIAPSTKARFIKRDELPFDFVRRRVSVLVEDTQHGDRCLICKGAVEEMMMVATHLREGDRVVALTETRRELLLAKTEDYNAQGFRVLLIATRKLDGSGNNPTLSVEDETELTIEGMLTFLDPPKESAGKAIAALRDNGVAVKVLTGDNPVVTARICLEVGIDTHDILTGTQVEAMSDAELASEVEKRAVFARLTPLQKTRILQALQKNGHTVGFLGDGINDAPALRDADVGISVDSAADIAKESSDIILLEKDLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLIQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWYVFAANNVEAQALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSRATLPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPLSYFPWLVATLLSYCLVAQGMKRFYIKRFGQWF
>NZ_AP019692.1|WP_023205354.1|75587_76283_+|MgtC-family-protein
MEERMLMFPYILNLLAAMLLGALIGAERQWRQRMAGLRTNALVATGAAVFILSSTTTSPDSPGRIAAQIVSGIGFLGAGVIMREGMNVRGLNTAATLWCSAGIGVLCGLGQFKNALAATIIILCANILLREAAQRINQLPVSAEGEKRYILKVTCNKEDESAVRQWLLNIVKEAAICLQGLGSVPAQEQGYKEIRAELVGHADYRKTRELIISRIGDNDNITAIHWSIDSQ
>NZ_AP019692.1|WP_024146432.1|74179_75082_-|EamA-family-transporter
MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSRMSSQFLTMIRLLFAGLILVTFSFMHGDKIFSILKNRKDALSLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFALARRTRPGILVLTAILTSLIGTFLLVTHGNPTSLSISSGALFWGIASAFAAAFYTTWPSRLIAQYGTLPVVGWSMSFGGLILLPFYAKEGTHFVVSGSLILAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGISFTLPDWLGTLLILSSVILISLDSRRRARAA
>NZ_AP019692.1|WP_000749539.1|73195_74137_+|Rpn-family-recombination-promoting-nuclease/putative-transposase
MKKSPTSTPHDAVFKTFLRHPDTARDFLNIHLPHSLRIRCDLTTLKLAPDSFIEKNLRAFYSDVLWSLKTCEGDGYIYVVIEHQSTPDAHMAFRLMRYATAAMQRHLDAGHKTLPLVIPMLFYHGAKSPYPFSLCWLDEFDDPALARQLYATAFPLVDITVVPDNEIMQHRRIAMLELVQKHIRQRDLMGLVERLAVLLITGNANDSQLKALFNYLLIQHGSTPRFGKFIREVARRVPQHKERLMTIVDRIRESGRRKGKREGVQQGIQQGIHQGKQEEALRIAHTMLEQGIDRQMVLMITGLSDEEIKAKRH
>NZ_AP019692.1|WP_000984809.1|86069_86687_-|helix-turn-helix-transcriptional-regulator
MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHNHLSSGFIFVDFSFPNLRRFTDLQWADSLANSGMHIVLISDKSLTPLANYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLKRFVSGISIQQIVNIDNIDIKKLYVHKLRLENKLGHSIHKIISNIL
>NZ_AP019692.1|WP_000834259.1|88727_90110_+|glycoside-pentoside-hexuronide-family-transporter
MKSEILSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLLARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSLNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVKLIGGENKALGFQGGIAALSVVAFLMLAFCFFTTKERVEAPATHTSMREDLRDIWHNDQWRIVGLLTILNILAVCVRGGAMMYYVTWILGKPGVFVAFLTTYCVGNLIGSALAKPLTDWKCKVSVFWWTNALLAVISVAMFFVPMHATIAMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLALGGALIGWMLAGGGYDAAAKTQNSATISIIIALFTIVPAICYLLSAAIAKRYYTLKSPFLKTILEQLAQGAHRNEQEFTHKELQN
>NZ_AP019692.1|WP_023205349.1|90121_92440_+|alpha-xylosidase
MKISDGNWLIQPGLNLIHPVQVFDVEQHGNEMVIYAAPRDVRERTWQLDTPLFTLRFFSPQEGVIGVRMEHFQGALDNGPHYPLNVLQDINVEMRNNAEFAELKSGSLSVRVTKGELWSLDFLRNGVRITGSQLKNNGYVQDTNSGRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQSYKNIPFYITNRGYGVLVNHPQCVSFEIGSEKVSKVQFSVESEYLEYFVIDGPTPKDVLNRYTQFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPVTFPDPKGMIRRLKAKGLKVCVWINPYIGQKSPVFQELKEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPQACEWYADKLKGLVEMGVDCFKTDFGERIPTDVRWFDGSDPQKMHNHYAYIYNELVWNVLKETVGVEEAVLFARSASVGAQQFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTEQKCRMMPYLYREAARANEAGTPMMRAMMLEFPDDPACDYLDRQYMLGDAVMVAPVFSEAGDVEFYLPEGRWTHLWRNDEVQGSRWHKQQHDFLSLPVYVRDNTLLALGNNSQKPDYAWHEGTAFQLFHLDDGCEAVCEVPATDGSTIFTLQAKRTGNTITVSGEGEARNWTLCLRNITQISGTKCGSYAGSELGVVVTPQGNEVVITL
>NZ_AP019692.1|WP_001651036.1|92542_94252_-|AsmA-family-protein
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHVSNWVSENSGYHLTFDVMDHRFSAPSHLLLENVTFGRDGQPATLVAKTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFEANRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVLGNKAQIQLSAGSLTLNDVPATNVLIEGSIDHNQVMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSEFFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASEFIYGSLHLLDPILNAEFSPQGVALRQFTTRWEGGMVRTSGAWLREGKALILDDTAIAGLEYTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPAFPWQITALDGYGANLELVQHHQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTGKGILEATASVSQLPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQLTASGNIQADAPLKPTVNGQLHAVNAQKQQITQTMQAGVVSGGEVTSTEPAL
>NZ_AP019692.1|WP_000115428.1|94372_95764_-|xanthine/proton-symporter-XanP
MSVNAIEPADAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLLAMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQGTSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVLSRILHLARRIITPLVSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLAIIILLNRQRNPYLRVASLVIAMAAGYLLAWFMGMLPENNAPVSQDILMVPTPLYYGLGIDWNLLLPLMLVFMITSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPQILQFAPEWVKNLLSSGIAAGGITAIVLNLILPPEKP
>NZ_AP019692.1|WP_000462256.1|95991_97197_+|sodium/glutamate-symporter
MFELDTLSTLVAATLVLLLGRKLVQSVSLLKKYTIPEPVAGGLLVAVALLVLKKSVGWEVNFDMTLRDPLMLAFFATIGLNANLASLRKGGRVVGVFLVVVVGLLLMQNAIGIGMASLLGLDPLMGLIAGSITLSGGHGTGAAWSKLFVERYGFASATEVAMACATFGLVLGGLIGGPVARYLVKHSTTPDGMPDDQAVPTAFEKPDVGRMITSLVLIETIALIAICLTVGKIVAQLLAGTVLELPVFVCVLFVGVILSNGLALVGFYRVFERAVSVLGNVSLSLFLAMALMSLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYDAAVLAAGHCGFGLGATPTAIANMQAITDRFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLMLPMFAG
>NZ_AP019692.1|WP_001651033.1|97199_98051_+|hypothetical-protein
MKKRCRQPETLRERCRHIFGDEPPVLNVWEAEFDYADAELQALAATDWRQITDWHLSVYYVLNLVYHEPMQPELFRYLFPLCLACWRETLLTHGYGDHFEESFLRALRRPYLWREMMDAAQRQQVRHFLLETMLTRINHERGFNSPLTWLDTFNVLGGIAPFIRSLWNQWWLLDTPGKAVCALQYAAHLIYPVEVNPLWPEGSWQWQPPLGATEEPWLENNLAFLTRQLTPEMILDGVQKAAAMLRDEPESAMATRISRDALAAQDVIAIQIEDLLSALSRGE
>NZ_AP019692.1|WP_001651032.1|98053_100135_-|ATP-dependent-DNA-helicase-RecG
MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGIYATVEGEVLNCNITFGGRRMMTCQISDGSGILTMRFFNFNAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRTLHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALRAGAQRYHAQPLSTNNILKDKLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFEPLGVEVGWLAGKQKGKARQAQQEAITSGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRHEIIDRVRNACTTEGRQAYWVCTLIEESDLLEAQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMLPEVQRIARHIHERYPQQAQALIERWMPETERYSNA
>NZ_AP019692.1|WP_001068436.1|100140_100830_-|tRNA-(guanosine(18)-2'-O)-methyltransferase-TrmH
MNPKRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEDEQQRLLFEGGYPVLAKVAKRKGLPYPRVNQQGEIDADADWWATMQAAG
>NZ_AP019692.1|WP_000280481.1|100834_102946_-|bifunctional-GTP-diphosphokinase/guanosine-3',5'-bis-pyrophosphate-3'-pyrophosphohydrolase
MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVHDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLSSGQTVEIITAPGARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLAEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQQGEAVVPTVAQSNHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETEQEFITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSTFIRLTARDRVHLANIMRKIRVMPDVIKVTRNRN

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Crispr_ID: NZ_AP019692_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019692_2

1000888-1003296

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

39 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_AP019692_2

>merge|NZ_AP019692|2|1000888-1003296|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGAGCCCAAATAAGCCGCCAGGCGTCGCGAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGAATGCCCAGAGTGTGGCAATCACTTTACAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGGCGTCTGAAATTGAGGCTCTTTACGCTCGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGAAAATCATTTTGCAATGATGAGCTATAACGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTAGGGAAGGTACTCCTGGCTAATTCTTTTGGTGTTCCCCGCGCCAGCGGGGATAAACCGAACTTAGCACCCTAATTAGCTGATTGATGCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGATATCAGACTCGGAGCGCTTAACTTTGAGTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTTCATCTGATCGCGATACTCTGATTTTTGGTGTTCCCCGCGCCAGCGGGGATAAACCGATAACCAGTCGCTTTTATATCGGTTCGCAGACGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCTGGTTCTCTGAATCTGCAACGATTATCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTTCTCCCGGTTAGCCTGGGTTTTGCTGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAAACCCCGGAAATGCAGGAGCGCGTTAAGGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCCGCGTATTCTTCATCAGTGATGTACCGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATCGGCAAACTTGCTTTAACGCCGGACAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCATTGAATCATATGGGACTCCGCACGTCGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGAGGCGGATCAATGAGCTACATCGACAAAGTGTTCCCCGCGCCAGCGGGGATAAACCATAAATCGCTTTACCGAAGCGTCGGGTTAACTCGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGGTGGGGATCACGACAATATCAGCCATTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTAAGCGCATAACCGTTAAAGAATTGCATGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGGACCGGATATATGAGCTTATACGTCATGAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTTAAATCACCACTGTATTTGCTAGCCATCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAAAAAGTAACTCCGGCCCCGAATATACGGGGGTGTTCCCCGCGCCAGCGGGGATAAACCATCACGATATGAATATGGGGCTTACGTGCAACCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCTGACAAAATCTGCCGTCGTCTTTCTTCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGCTGTATTAACCCACCGGTACTACAACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCATTTGCTCGCCGTTCCGGCCGAGTTCTGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGACAGGTTTTAGTATTTAGTGACCGGGTGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGAGCGAATTATCAGTAGTTTCATTGGTGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGGGGATCTGCATGGACTCCCGCACGTTGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGGCGCGCACGGAGGCTGTGCCGCTACGTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTTTCTGAACTACTCATCTGCCATTCGTGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGATGCTGGATCAGCCACCACAACCATTTACCGGGTGTTCCCCGCGCTAGCGGGGATAAACCGGAGAATACCTTGATCTAACTTTATCGGCAGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGATCTGGACTTGCGTTTTGTGAGCAGTCCATATGTGTTCCCCGCGCCAGCGGGGATAAACCTCCAACTGGCGTCTTTAAATTACCGTCAAACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTGCTCAAAAAATTAGGGCAAAGGACTACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGAGCGTTTATATATCGTCATTCACCAAAATCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCCCGGTAAATCTTTCTACGCGCCTGATTGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCGGGAGCGTGATTACCTGCCCAGCGGGAAAGTGTTCCCCGCGTCAGCGGGGATAGCCGT

>NZ_AP019692|2|1|1000888-1003234|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGAGCCCAAATAAGCCGCCAGGCGTCGCGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTGAATGCCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGGGCGTCTGAAATTGAGGCTCTTTACGCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGGAAAATCATTTTGCAATGATGAGCTATAAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTTAGGGAAGGTACTCCTGGCTAATTCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAACTTAGCACCCTAATTAGCTGATTGATGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATATCAGACTCGGAGCGCTTAACTTTGAGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCGTTCATCTGATCGCGATACTCTGATTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATAACCAGTCGCTTTTATATCGGTTCGCAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCCTGGTTCTCTGAATCTGCAACGATTATCTG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCTTCTCCCGGTTAGCCTGGGTTTTGCTGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAAACCCCGGAAATGCAGGAGCGCGTTAAGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGCCGCGTATTCTTCATCAGTGATGTACCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGGATCGGCAAACTTGCTTTAACGCCGGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCATTGAATCATATGGGACTCCGCACGTCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCAGGAGGCGGATCAATGAGCTACATCGACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	ATAAATCGCTTTACCGAAGCGTCGGGTTAACTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCTGGTGGGGATCACGACAATATCAGCCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTAAGCGCATAACCGTTAAAGAATTGCATGAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGACCGGATATATGAGCTTATACGTCATGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTTTAAATCACCACTGTATTTGCTAGCCATCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCAAAAAGTAACTCCGGCCCCGAATATACGGGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	ATCACGATATGAATATGGGGCTTACGTGCAACC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGCTGACAAAATCTGCCGTCGTCTTTCTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGCGCTGTATTAACCCACCGGTACTACAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCATTTGCTCGCCGTTCCGGCCGAGTTCTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGACAGGTTTTAGTATTTAGTGACCGGGTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTGAGCGAATTATCAGTAGTTTCATTGGTGTT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCTGGGGATCTGCATGGACTCCCGCACGTTGCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGGCGCGCACGGAGGCTGTGCCGCTACGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGTTTCTGAACTACTCATCTGCCATTCGTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATGCTGGATCAGCCACCACAACCATTTACCGG
GTGTTCCCCGCGCTAGCGGGGATAAACC	GGAGAATACCTTGATCTAACTTTATCGGCAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATCTGGACTTGCGTTTTGTGAGCAGTCCATAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TCCAACTGGCGTCTTTAAATTACCGTCAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTTGCTCAAAAAATTAGGGCAAAGGACTACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGAGCGTTTATATATCGTCATTCACCAAAATC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGTCCCGGTAAATCTTTCTACGCGCCTGATTG
GTGTTCCCCGCGCCAGCGGGGATAAACC

>NZ_AP019692|2|2|1000888-1003296|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAGCCCAAATAAGCCGCCAGGCGTCGCGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAATGCCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGCGTCTGAAATTGAGGCTCTTTACGCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGAAAATCATTTTGCAATGATGAGCTATAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTAGGGAAGGTACTCCTGGCTAATTCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTTAGCACCCTAATTAGCTGATTGATGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATCAGACTCGGAGCGCTTAACTTTGAGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTTCATCTGATCGCGATACTCTGATTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATAACCAGTCGCTTTTATATCGGTTCGCAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTGGTTCTCTGAATCTGCAACGATTATCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCTCCCGGTTAGCCTGGGTTTTGCTGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCCCGGAAATGCAGGAGCGCGTTAAGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCGCGTATTCTTCATCAGTGATGTACCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGGCAAACTTGCTTTAACGCCGGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGAATCATATGGGACTCCGCACGTCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAGGCGGATCAATGAGCTACATCGACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TAAATCGCTTTACCGAAGCGTCGGGTTAACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGTGGGGATCACGACAATATCAGCCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAAGCGCATAACCGTTAAAGAATTGCATGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGACCGGATATATGAGCTTATACGTCATGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTAAATCACCACTGTATTTGCTAGCCATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAAGTAACTCCGGCCCCGAATATACGGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TCACGATATGAATATGGGGCTTACGTGCAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCTGACAAAATCTGCCGTCGTCTTTCTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGCTGTATTAACCCACCGGTACTACAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTTGCTCGCCGTTCCGGCCGAGTTCTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGACAGGTTTTAGTATTTAGTGACCGGGTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGCGAATTATCAGTAGTTTCATTGGTGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGGGATCTGCATGGACTCCCGCACGTTGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGGCGCGCACGGAGGCTGTGCCGCTACGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTTCTGAACTACTCATCTGCCATTCGTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCTGGATCAGCCACCACAACCATTTACCGG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GAGAATACCTTGATCTAACTTTATCGGCAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTGGACTTGCGTTTTGTGAGCAGTCCATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	CCAACTGGCGTCTTTAAATTACCGTCAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGCTCAAAAAATTAGGGCAAAGGACTACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAGCGTTTATATATCGTCATTCACCAAAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCCGGTAAATCTTTCTACGCGCCTGATTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGGGAGCGTGATTACCTGCCCAGCGGGAAA
GTGTTCCCCGCGTCAGCGGGGATAGCCGT

>NZ_AP019692|2|1|1000888-1003296|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAGCCCAAATAAGCCGCCAGGCGTCGCGAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAATGCCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGCGTCTGAAATTGAGGCTCTTTACGCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGAAAATCATTTTGCAATGATGAGCTATAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTAGGGAAGGTACTCCTGGCTAATTCTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTTAGCACCCTAATTAGCTGATTGATGCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATCAGACTCGGAGCGCTTAACTTTGAGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTTCATCTGATCGCGATACTCTGATTTTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATAACCAGTCGCTTTTATATCGGTTCGCAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTGGTTCTCTGAATCTGCAACGATTATCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCTCCCGGTTAGCCTGGGTTTTGCTGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCCCGGAAATGCAGGAGCGCGTTAAGGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCGCGTATTCTTCATCAGTGATGTACCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGATCGGCAAACTTGCTTTAACGCCGGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGAATCATATGGGACTCCGCACGTCGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGAGGCGGATCAATGAGCTACATCGACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TAAATCGCTTTACCGAAGCGTCGGGTTAACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGTGGGGATCACGACAATATCAGCCATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAAGCGCATAACCGTTAAAGAATTGCATGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGACCGGATATATGAGCTTATACGTCATGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTAAATCACCACTGTATTTGCTAGCCATCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAAGTAACTCCGGCCCCGAATATACGGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCA	TCACGATATGAATATGGGGCTTACGTGCAACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCTGACAAAATCTGCCGTCGTCTTTCTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGCTGTATTAACCCACCGGTACTACAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTTGCTCGCCGTTCCGGCCGAGTTCTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGACAGGTTTTAGTATTTAGTGACCGGGTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGCGAATTATCAGTAGTTTCATTGGTGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGGGATCTGCATGGACTCCCGCACGTTGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGGCGCGCACGGAGGCTGTGCCGCTACGTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTTCTGAACTACTCATCTGCCATTCGTGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATGCTGGATCAGCCACCACAACCATTTACCGG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	GAGAATACCTTGATCTAACTTTATCGGCAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTGGACTTGCGTTTTGTGAGCAGTCCATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	CCAACTGGCGTCTTTAAATTACCGTCAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGCTCAAAAAATTAGGGCAAAGGACTACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAGCGTTTATATATCGTCATTCACCAAAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCCCGGTAAATCTTTCTACGCGCCTGATTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCGGGAGCGTGATTACCTGCCCAGCGGGAAA
GTGTTCCCCGCGTCAGCGGGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019692.1\|WP_000842512.1\|994545_995133_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_AP019692.1\|WP_023205404.1\|1005066_1006866_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_AP019692.1\|WP_000210451.1\|995737_996538_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_AP019692.1\|WP_000210863.1\|996765_998403_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_AP019692.1\|WP_000832396.1\|989969_990440_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_AP019692.1\|WP_023205408.1\|990980_991754_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_AP019692.1\|WP_000036734.1\|998485_999784_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_AP019692.1\|WP_023205401.1\|1010937_1013637_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_AP019692.1\|WP_001650537.1\|1008653_1009388_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_AP019692.1\|WP_001650529.1\|1016171_1017230_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_AP019692.1\|WP_023181493.1\|1015546_1016149_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_AP019692.1\|WP_076707596.1\|991766_994466_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_AP019692.1\|WP_001650549.1\|989436_989973_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_AP019692.1\|WP_023205403.1\|1006865_1008578_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_AP019692.1\|WP_001650532.1\|1013994_1015530_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_AP019692.1\|WP_024146436.1\|1009600_1010554_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_AP019692.1\|WP_001199961.1\|999919_1000591_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_AP019692.1\|WP_001650541.1\|1003393_1004191_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_AP019692.1\|WP_023205409.1\|990454_990961_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NZ_AP019692.1\|WP_000108313.1\|1004280_1004643_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264

Protein	Function_ID	Function_description	E-value
NZ_AP019692.1\|WP_000842512.1\|994545_995133_-\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
NZ_AP019692.1\|WP_023205404.1\|1005066_1006866_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_AP019692.1\|WP_000210451.1\|995737_996538_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_AP019692.1\|WP_000210863.1\|996765_998403_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_AP019692.1\|WP_000832396.1\|989969_990440_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
NZ_AP019692.1\|WP_023205408.1\|990980_991754_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	1.32181e-180
NZ_AP019692.1\|WP_000036734.1\|998485_999784_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_AP019692.1\|WP_023205401.1\|1010937_1013637_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.84408e-141
NZ_AP019692.1\|WP_001650537.1\|1008653_1009388_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.20028e-139
NZ_AP019692.1\|WP_001650529.1\|1016171_1017230_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	4.75734e-120
NZ_AP019692.1\|WP_023181493.1\|1015546_1016149_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	3.07121e-37
NZ_AP019692.1\|WP_076707596.1\|991766_994466_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_AP019692.1\|WP_001650549.1\|989436_989973_-\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	7.20632e-121
NZ_AP019692.1\|WP_023205403.1\|1006865_1008578_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_AP019692.1\|WP_001650532.1\|1013994_1015530_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_AP019692.1\|WP_024146436.1\|1009600_1010554_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_AP019692.1\|WP_001199961.1\|999919_1000591_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_AP019692.1\|WP_001650541.1\|1003393_1004191_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	2.22001e-102
NZ_AP019692.1\|WP_023205409.1\|990454_990961_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	7.70901e-105
NZ_AP019692.1\|WP_000108313.1\|1004280_1004643_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58

>NZ_AP019692.1|WP_001199961.1|999919_1000591_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_AP019692.1|WP_000036734.1|998485_999784_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_AP019692.1|WP_000210863.1|996765_998403_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_AP019692.1|WP_000210451.1|995737_996538_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_AP019692.1|WP_000842512.1|994545_995133_-|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_AP019692.1|WP_076707596.1|991766_994466_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_AP019692.1|WP_023205408.1|990980_991754_-|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQSDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_AP019692.1|WP_023205409.1|990454_990961_-|fimbrial-protein
MTMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDVSQTKPVGYSLNCDGRASDYLKLQIQGSTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFDASATLVVDYQ
>NZ_AP019692.1|WP_000832396.1|989969_990440_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_AP019692.1|WP_001650549.1|989436_989973_-|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATVGAAFVLKEGITTINLQARLQKYAGEDVMPGEFKGSATVSFEYQ
>NZ_AP019692.1|WP_001650541.1|1003393_1004191_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKQIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_AP019692.1|WP_000108313.1|1004280_1004643_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_AP019692.1|WP_023205404.1|1005066_1006866_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMSGITLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVESYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_AP019692.1|WP_023205403.1|1006865_1008578_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESELHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIESGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_AP019692.1|WP_001650537.1|1008653_1009388_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_AP019692.1|WP_024146436.1|1009600_1010554_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVRDHFRAEKKDHALDVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEATDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYREVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKIYLTHERSLHIGKDGCSRNILLV
>NZ_AP019692.1|WP_023205401.1|1010937_1013637_-|CRISPR-associated-helicase/endonuclease-Cas3
MTQIEYLDYLCYWGKTDKSTKNIICNYHLLAYHCLDVAACGKYIIKNNIFNSCNILKECNISGINAENWIIWFLASHDIGKFARGFQKYAEFPNSPLVSPVSGVSAFERHDSLGFYLWGKLFEAWSSGSNEIIAGIEPENRARFESALNSWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVTLADWMGSDESQFPLLSSAMSLKDYWPLACEKAQQAILRMPPLSQHSHYQDHRALFPFIQTLTPLQQRASELDISAPGAQLVVLEDVTGAGKTEAALILTHRLMSANKGHGLYVGLPTMATANAMYQRLASAYHALFTDESRPSLILAHGGREMSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPEQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDERQPPILHILAPHWQEQAEEGWLGQELKGTGFVYTDHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQIVLVSDAGEASYYSKRFGLVG
>NZ_AP019692.1|WP_001650532.1|1013994_1015530_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDLTKEKWLPVIFSNGDKKKISLRDLLDNRIQDLAYPRADFQGAAWQMLIGILQCTVAPEDKEEWADIWHESIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNALKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNAHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMCSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNKMSLWCFAWDMDKAKVRCWYQHRIPLISVSHEEQFLAALNTVLVLASESLSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRALQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>NZ_AP019692.1|WP_023181493.1|1015546_1016149_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAALCRILHPDAQKALLGWFATLSERYEHKDGKRVNGRAWRAELKRMAPPYGVMICEGHDALRQALLKHMRLQPLDEMALALFVSVAVHIKSHKANISFAAQLGEKLKGSTSCVSGLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRNPFERNRIRWANEYLSTSRGK
>NZ_AP019692.1|WP_001650529.1|1016171_1017230_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYAPANLNRDESGRPKTAFMGGVERLRVSSQSLKRAWRVSETFEAAMDGFMGKRTRRIGVDYVYRPMKDAGIEEKIAKSSSDLIAKQFGKLKSDKDAKLEKNLEIEQIVHVSNHEISLIKQLVDTLISDKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLAAAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ

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Crispr_ID: NZ_AP019692_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019692_3

1019967-1022012

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

33 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_AP019692_3

>merge|NZ_AP019692|3|1019967-1022012|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGAATACCATTTTCCCGACAGAATAATTTAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCACATTTCCTCAGTGTGCTTCAGAGGGTGGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGATCTAGGAATTAATAACAATCAGTTACTATCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTGCAAAGATATCGACGTTCAGGAGCCTGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTATTACCCTTTCAGAATCTTTTTTGGATTGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTATCAACTGTAATACCTTTACTTTCGAGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCAAAGACGCGATCCTATCAACACTGCCCGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTACCCCGGCTCAAAAAGACATTCATAACGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCGCTAACTCCCTTAAAAGGGATATAATAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTACTGGACATGAATAAGCGGTTAGATGAGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGATATTATTAACCTGTGAACTATCTACCTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCACCAGCACGACAAACAGCAACGCACGATTGTGTTCCCCGCGCCAGCGGGGATAAACCGAGACCGCGAGCAGATAACGCAGCTGGAGGCACGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGACGAGAAACGCCACTTTTATACCAAAAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAATTTAACCATCGTATTTGCAGTTATTGTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAACTTTTCAGCCTGTTTATTAACTGCTCTACGTGTTCCCCGCGCCAGCGGGGATAAACCGCATGGCGGCGCGGCTGGCATCTTCATTCTCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGACATTGTTGCTGATGGCGCAGTTATGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTATCAGATCGTTCAGCATTGGCGCTTTGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCTGATTCAGTCCAGTAGAGATGCCATGTGTGTGTTCCCCGCGCCAGCGGGGATAAACCGACACCGTACTGAGTCTGAATGATGTGATTGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGGTCCTCAAGTGAGTCTTTGGAAAAACCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATTTGGATCGCCCTGAGTTTAGGCGCATGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGAATGTCCAGAGTGTGGCAATCACTTTACAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTGTTCACCGCTGCGCCCGGTTATATCCCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGATATTGACGATGTATGACCGGAAAACCTCGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGGCAAACGAACAGGGATTTGTCGGCAGTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCCCTCCGGGGCTGGTTACTCGCAGAGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTGCTGGCTGATGTTAAACGTAAAACCAGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCATTGCTGCCAGCCAGAAGCGCCCTTCACTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTACGGTAAACGTGAATGTGCGTATTGACGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCTCAAGGTCATGCAGGTGAATGTCCCCAGACGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGACAAGGGCTGAAAAATGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_AP019692|3|2|1019967-1021951|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAATACCATTTTCCCGACAGAATAATTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACATTTCCTCAGTGTGCTTCAGAGGGTGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTAGGAATTAATAACAATCAGTTACTATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGCAAAGATATCGACGTTCAGGAGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATTACCCTTTCAGAATCTTTTTTGGATTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATCAACTGTAATACCTTTACTTTCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAAAGACGCGATCCTATCAACACTGCCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACCCCGGCTCAAAAAGACATTCATAACGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCGCTAACTCCCTTAAAAGGGATATAATAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACTGGACATGAATAAGCGGTTAGATGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATATTATTAACCTGTGAACTATCTACCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACCAGCACGACAAACAGCAACGCACGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGACCGCGAGCAGATAACGCAGCTGGAGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGACGAGAAACGCCACTTTTATACCAAAAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTTAACCATCGTATTTGCAGTTATTGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTTTCAGCCTGTTTATTAACTGCTCTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATGGCGGCGCGGCTGGCATCTTCATTCTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACATTGTTGCTGATGGCGCAGTTATGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATCAGATCGTTCAGCATTGGCGCTTTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTGATTCAGTCCAGTAGAGATGCCATGTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACACCGTACTGAGTCTGAATGATGTGATTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGTCCTCAAGTGAGTCTTTGGAAAAACCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTGGATCGCCCTGAGTTTAGGCGCATGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAATGTCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTTCACCGCTGCGCCCGGTTATATCCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTGACGATGTATGACCGGAAAACCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGCAAACGAACAGGGATTTGTCGGCAGTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCCTCCGGGGCTGGTTACTCGCAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGCTGGCTGATGTTAAACGTAAAACCAGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGCTGCCAGCCAGAAGCGCCCTTCACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTACGGTAAACGTGAATGTGCGTATTGACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTCAAGGTCATGCAGGTGAATGTCCCCAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_AP019692|3|3|1019967-1022012|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAATACCATTTTCCCGACAGAATAATTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACATTTCCTCAGTGTGCTTCAGAGGGTGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTAGGAATTAATAACAATCAGTTACTATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGCAAAGATATCGACGTTCAGGAGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATTACCCTTTCAGAATCTTTTTTGGATTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATCAACTGTAATACCTTTACTTTCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAAAGACGCGATCCTATCAACACTGCCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACCCCGGCTCAAAAAGACATTCATAACGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCGCTAACTCCCTTAAAAGGGATATAATAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACTGGACATGAATAAGCGGTTAGATGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATATTATTAACCTGTGAACTATCTACCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACCAGCACGACAAACAGCAACGCACGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGACCGCGAGCAGATAACGCAGCTGGAGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGACGAGAAACGCCACTTTTATACCAAAAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTTAACCATCGTATTTGCAGTTATTGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTTTCAGCCTGTTTATTAACTGCTCTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATGGCGGCGCGGCTGGCATCTTCATTCTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACATTGTTGCTGATGGCGCAGTTATGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATCAGATCGTTCAGCATTGGCGCTTTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTGATTCAGTCCAGTAGAGATGCCATGTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACACCGTACTGAGTCTGAATGATGTGATTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGTCCTCAAGTGAGTCTTTGGAAAAACCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTGGATCGCCCTGAGTTTAGGCGCATGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAATGTCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTTCACCGCTGCGCCCGGTTATATCCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTGACGATGTATGACCGGAAAACCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGCAAACGAACAGGGATTTGTCGGCAGTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCCTCCGGGGCTGGTTACTCGCAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGCTGGCTGATGTTAAACGTAAAACCAGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGCTGCCAGCCAGAAGCGCCCTTCACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTACGGTAAACGTGAATGTGCGTATTGACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTCAAGGTCATGCAGGTGAATGTCCCCAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_AP019692|3|2|1019967-1022012|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAATACCATTTTCCCGACAGAATAATTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACATTTCCTCAGTGTGCTTCAGAGGGTGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCTAGGAATTAATAACAATCAGTTACTATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGCAAAGATATCGACGTTCAGGAGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATTACCCTTTCAGAATCTTTTTTGGATTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATCAACTGTAATACCTTTACTTTCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCAAAGACGCGATCCTATCAACACTGCCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACCCCGGCTCAAAAAGACATTCATAACGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCGCTAACTCCCTTAAAAGGGATATAATAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACTGGACATGAATAAGCGGTTAGATGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGATATTATTAACCTGTGAACTATCTACCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCACCAGCACGACAAACAGCAACGCACGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGACCGCGAGCAGATAACGCAGCTGGAGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGACGAGAAACGCCACTTTTATACCAAAAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTTAACCATCGTATTTGCAGTTATTGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACTTTTCAGCCTGTTTATTAACTGCTCTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATGGCGGCGCGGCTGGCATCTTCATTCTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACATTGTTGCTGATGGCGCAGTTATGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATCAGATCGTTCAGCATTGGCGCTTTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTGATTCAGTCCAGTAGAGATGCCATGTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACACCGTACTGAGTCTGAATGATGTGATTGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGTCCTCAAGTGAGTCTTTGGAAAAACCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTGGATCGCCCTGAGTTTAGGCGCATGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAATGTCCAGAGTGTGGCAATCACTTTACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTTCACCGCTGCGCCCGGTTATATCCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATATTGACGATGTATGACCGGAAAACCTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGGCAAACGAACAGGGATTTGTCGGCAGTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCCCTCCGGGGCTGGTTACTCGCAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGCTGGCTGATGTTAAACGTAAAACCAGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGCTGCCAGCCAGAAGCGCCCTTCACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTACGGTAAACGTGAATGTGCGTATTGACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTCAAGGTCATGCAGGTGAATGTCCCCAGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGCCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019692.1\|WP_001650537.1\|1008653_1009388_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_AP019692.1\|WP_000062282.1\|1019588_1019882_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_AP019692.1\|WP_001219244.1\|1027877_1028357_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_AP019692.1\|WP_024146436.1\|1009600_1010554_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_AP019692.1\|WP_023205401.1\|1010937_1013637_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_AP019692.1\|WP_001173663.1\|1025667_1026273_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_AP019692.1\|WP_001537530.1\|1026323_1026647_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_AP019692.1\|WP_000134246.1\|1028353_1029403_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_AP019692.1\|WP_001650529.1\|1016171_1017230_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_AP019692.1\|WP_000666424.1\|1017239_1017965_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_AP019692.1\|WP_001650520.1\|1027167_1027878_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_AP019692.1\|WP_001650523.1\|1024241_1025681_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_AP019692.1\|WP_001221538.1\|1029383_1030145_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_AP019692.1\|WP_001650527.1\|1018668_1019586_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_AP019692.1\|WP_000372384.1\|1023323_1024232_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_AP019692.1\|WP_001650532.1\|1013994_1015530_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_AP019692.1\|WP_023181493.1\|1015546_1016149_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_AP019692.1\|WP_000517480.1\|1026837_1027149_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_AP019692.1\|WP_000490481.1\|1022026_1023073_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_AP019692.1\|WP_023205400.1\|1017964_1018669_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795

Protein	Function_ID	Function_description	E-value
NZ_AP019692.1\|WP_001650537.1\|1008653_1009388_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.20028e-139
NZ_AP019692.1\|WP_000062282.1\|1019588_1019882_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	5.81067e-65
NZ_AP019692.1\|WP_001219244.1\|1027877_1028357_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_AP019692.1\|WP_024146436.1\|1009600_1010554_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_AP019692.1\|WP_023205401.1\|1010937_1013637_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.84408e-141
NZ_AP019692.1\|WP_001173663.1\|1025667_1026273_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_AP019692.1\|WP_001537530.1\|1026323_1026647_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	3.31009e-48
NZ_AP019692.1\|WP_000134246.1\|1028353_1029403_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_AP019692.1\|WP_001650529.1\|1016171_1017230_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	4.75734e-120
NZ_AP019692.1\|WP_000666424.1\|1017239_1017965_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.38262e-47
NZ_AP019692.1\|WP_001650520.1\|1027167_1027878_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.3487e-118
NZ_AP019692.1\|WP_001650523.1\|1024241_1025681_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_AP019692.1\|WP_001221538.1\|1029383_1030145_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_AP019692.1\|WP_001650527.1\|1018668_1019586_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.93041e-156
NZ_AP019692.1\|WP_000372384.1\|1023323_1024232_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_AP019692.1\|WP_001650532.1\|1013994_1015530_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_AP019692.1\|WP_023181493.1\|1015546_1016149_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	3.07121e-37
NZ_AP019692.1\|WP_000517480.1\|1026837_1027149_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_AP019692.1\|WP_000490481.1\|1022026_1023073_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_AP019692.1\|WP_023205400.1\|1017964_1018669_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	2.41325e-89

>NZ_AP019692.1|WP_000062282.1|1019588_1019882_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSAKIREMIWQQVSVLADEGNVVMAWATNTESGFEFQTFGVNRRIPVDLDGLRLVSFLPVENQ
>NZ_AP019692.1|WP_001650527.1|1018668_1019586_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKWQGRRYDPKDWKKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFETVVPKAFEIARRNPAEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGEIQPPLPPEDSQPIAIPLPVALGDSGHRST
>NZ_AP019692.1|WP_023205400.1|1017964_1018669_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSAIPPLLQHSLFLIETKPFNPQLTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIASEPDDFAMWAGDEYSELQAHCGCVQAYQQHRFVRKDQETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKR
>NZ_AP019692.1|WP_000666424.1|1017239_1017965_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRHYHLAVHALASQDRWLRDYHTVSAPRENKKYRYYTRRDELTLAPDEVGTLISQREYRCDGYWHVAISATPDAPHSLSELREALLTPHFPLYLGRKSCPLALPLAARLMTGTLKEVFTHAVEEISAAELSGFTLREGICYWDDPDEESLVWQQKQHSNNQPVSRQRWQFGGYTRFNGPLQERT
>NZ_AP019692.1|WP_001650529.1|1016171_1017230_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYAPANLNRDESGRPKTAFMGGVERLRVSSQSLKRAWRVSETFEAAMDGFMGKRTRRIGVDYVYRPMKDAGIEEKIAKSSSDLIAKQFGKLKSDKDAKLEKNLEIEQIVHVSNHEISLIKQLVDTLISDKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLAAAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
>NZ_AP019692.1|WP_023181493.1|1015546_1016149_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAALCRILHPDAQKALLGWFATLSERYEHKDGKRVNGRAWRAELKRMAPPYGVMICEGHDALRQALLKHMRLQPLDEMALALFVSVAVHIKSHKANISFAAQLGEKLKGSTSCVSGLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRNPFERNRIRWANEYLSTSRGK
>NZ_AP019692.1|WP_001650532.1|1013994_1015530_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDLTKEKWLPVIFSNGDKKKISLRDLLDNRIQDLAYPRADFQGAAWQMLIGILQCTVAPEDKEEWADIWHESIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNALKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNAHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMCSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNKMSLWCFAWDMDKAKVRCWYQHRIPLISVSHEEQFLAALNTVLVLASESLSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRALQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>NZ_AP019692.1|WP_023205401.1|1010937_1013637_-|CRISPR-associated-helicase/endonuclease-Cas3
MTQIEYLDYLCYWGKTDKSTKNIICNYHLLAYHCLDVAACGKYIIKNNIFNSCNILKECNISGINAENWIIWFLASHDIGKFARGFQKYAEFPNSPLVSPVSGVSAFERHDSLGFYLWGKLFEAWSSGSNEIIAGIEPENRARFESALNSWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVTLADWMGSDESQFPLLSSAMSLKDYWPLACEKAQQAILRMPPLSQHSHYQDHRALFPFIQTLTPLQQRASELDISAPGAQLVVLEDVTGAGKTEAALILTHRLMSANKGHGLYVGLPTMATANAMYQRLASAYHALFTDESRPSLILAHGGREMSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKILLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPEQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDERQPPILHILAPHWQEQAEEGWLGQELKGTGFVYTDHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQIVLVSDAGEASYYSKRFGLVG
>NZ_AP019692.1|WP_024146436.1|1009600_1010554_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVRDHFRAEKKDHALDVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEATDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYREVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKIYLTHERSLHIGKDGCSRNILLV
>NZ_AP019692.1|WP_001650537.1|1008653_1009388_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_AP019692.1|WP_000490481.1|1022026_1023073_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_AP019692.1|WP_000372384.1|1023323_1024232_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_AP019692.1|WP_001650523.1|1024241_1025681_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAVIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_AP019692.1|WP_001173663.1|1025667_1026273_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_AP019692.1|WP_001537530.1|1026323_1026647_+|DUF3561-family-protein
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_AP019692.1|WP_000517480.1|1026837_1027149_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_AP019692.1|WP_001650520.1|1027167_1027878_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVYALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_AP019692.1|WP_001219244.1|1027877_1028357_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_AP019692.1|WP_000134246.1|1028353_1029403_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_AP019692.1|WP_001221538.1|1029383_1030145_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP019692_3	3.31\|1021829\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021829-1021860	32	NZ_CP008900	Enterobacter hormaechei subsp. hoffmannii ECNIH3 plasmid pENT-d4a, complete sequence	56750-56781	1	0.969
NZ_AP019692_3	3.31\|1021829\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021829-1021860	32	NZ_KY978631	Klebsiella pneumoniae strain 447 plasmid p447-IMP, complete sequence	48648-48679	2	0.938
NZ_AP019692_3	3.31\|1021829\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021829-1021860	32	CP045557	Citrobacter sp. S39 plasmid pS39-2, complete sequence	130568-130599	2	0.938
NZ_AP019692_3	3.31\|1021829\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021829-1021860	32	NZ_CP022136	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence	31095-31126	3	0.906
NZ_AP019692_3	3.31\|1021829\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021829-1021860	32	NZ_CP029996	Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence	61659-61690	3	0.906
NZ_AP019692_3	3.31\|1021829\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021829-1021860	32	NZ_CP022036	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence	14331-14362	3	0.906
NZ_AP019692_3	3.31\|1021829\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021829-1021860	32	NC_019335	Salmonella sp. 14 plasmid p14-95A, complete sequence	76776-76807	3	0.906
NZ_AP019692_3	3.31\|1021829\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021829-1021860	32	NC_019336	Salmonella sp. 40 plasmid p40-95A, complete sequence	61523-61554	3	0.906
NZ_AP019692_2	2.50\|1001588\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001588-1001619	32	MN693196	Marine virus AFVG_25M118, complete genome	409-440	6	0.812
NZ_AP019692_2	2.68\|1002687\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002687-1002718	32	MF150911	Ralstonia phage DU_RP_II, complete genome	23701-23732	6	0.812
NZ_AP019692_2	2.68\|1002687\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002687-1002718	32	MN996301	Ralstonia phage RpY1, complete genome	40170-40201	6	0.812
NZ_AP019692_3	3.17\|1020975\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020975-1021006	32	NZ_CP026282	Klebsiella oxytoca strain KONIH2 plasmid pKOR-e3cb, complete sequence	19891-19922	6	0.812
NZ_AP019692_3	3.17\|1020975\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020975-1021006	32	NZ_CP050074	Enterobacter kobei strain 070 plasmid p070, complete sequence	36838-36869	6	0.812
NZ_AP019692_3	3.17\|1020975\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020975-1021006	32	NZ_CP041248	Raoultella electrica strain DSM 102253 plasmid unnamed1, complete sequence	146099-146130	6	0.812
NZ_AP019692_3	3.17\|1020975\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020975-1021006	32	NZ_CP011633	Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence	85932-85963	6	0.812
NZ_AP019692_3	3.17\|1020975\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020975-1021006	32	NZ_CP026234	Citrobacter freundii complex sp. CFNIH4 plasmid pCFR-4109, complete sequence	193122-193153	6	0.812
NZ_AP019692_3	3.30\|1021768\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021768-1021799	32	NC_009427	Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence	453714-453745	6	0.812
NZ_AP019692_2	2.12\|1001587\|33\|NZ_AP019692\|PILER-CR	1001587-1001619	33	MN693196	Marine virus AFVG_25M118, complete genome	409-441	7	0.788
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP053440	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence	316907-316938	7	0.781
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	615298-615329	7	0.781
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	37648-37679	7	0.781
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	998082-998113	7	0.781
NZ_AP019692_2	2.51\|1001649\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001649-1001680	32	NC_013944	Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK1, complete sequence	13801-13832	7	0.781
NZ_AP019692_2	2.51\|1001649\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001649-1001680	32	NC_013945	Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK3, complete sequence	13801-13832	7	0.781
NZ_AP019692_2	2.51\|1001649\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001649-1001680	32	NC_042136	Vibrio phage VP4B, partial genome	43596-43627	7	0.781
NZ_AP019692_2	2.61\|1002260\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002260-1002291	32	NZ_CP021139	Sulfuriferula sp. AH1 plasmid unnamed, complete sequence	32668-32699	7	0.781
NZ_AP019692_2	2.61\|1002260\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002260-1002291	32	LC155906	Achromobacter xylosoxidans plasmid pKUN4507_1 DNA, complete sequence, strain: KUN4507	4936-4967	7	0.781
NZ_AP019692_2	2.61\|1002260\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002260-1002291	32	NC_007206	Haemophilus influenzae biotype aegyptius plasmid pF1947, complete sequence	28452-28483	7	0.781
NZ_AP019692_2	2.61\|1002260\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002260-1002291	32	NC_004846	Haemophilus influenzae biotype aegyptius plasmid pF3031, complete sequence	28175-28206	7	0.781
NZ_AP019692_2	2.61\|1002260\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002260-1002291	32	NC_004058	Haemophilus influenzae biotype aegyptius BPF plasmid pF3028, complete sequence	28121-28152	7	0.781
NZ_AP019692_2	2.62\|1002321\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002321-1002352	32	MT701590	Klebsiella phage Miami, complete genome	35185-35216	7	0.781
NZ_AP019692_2	2.71\|1002870\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002870-1002901	32	MG945460	UNVERIFIED: Microviridae sp. isolate 89-1602, complete genome	261-292	7	0.781
NZ_AP019692_3	3.6\|1020301\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020301-1020332	32	MN693991	Marine virus AFVG_250M861, complete genome	23223-23254	7	0.781
NZ_AP019692_3	3.6\|1020301\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020301-1020332	32	MN692996	Marine virus AFVG_117M70, complete genome	23215-23246	7	0.781
NZ_AP019692_3	3.6\|1020301\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020301-1020332	32	MN694291	Marine virus AFVG_250M864, complete genome	15089-15120	7	0.781
NZ_AP019692_3	3.6\|1020301\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020301-1020332	32	MN694083	Marine virus AFVG_250M863, complete genome	15099-15130	7	0.781
NZ_AP019692_3	3.6\|1020301\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020301-1020332	32	MN693818	Marine virus AFVG_250M1205, complete genome	21186-21217	7	0.781
NZ_AP019692_3	3.6\|1020301\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020301-1020332	32	MN694793	Marine virus AFVG_250M862, complete genome	23223-23254	7	0.781
NZ_AP019692_3	3.6\|1020301\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020301-1020332	32	MN693817	Marine virus AFVG_250M336, complete genome	23063-23094	7	0.781
NZ_AP019692_3	3.17\|1020975\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020975-1021006	32	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	197933-197964	7	0.781
NZ_AP019692_3	3.17\|1020975\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020975-1021006	32	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	770248-770279	7	0.781
NZ_AP019692_3	3.17\|1020975\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020975-1021006	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	138380-138411	7	0.781
NZ_AP019692_3	3.23\|1021341\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021341-1021372	32	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	399996-400027	7	0.781
NZ_AP019692_2	2.13\|1001648\|33\|NZ_AP019692\|PILER-CR	1001648-1001680	33	NC_013944	Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK1, complete sequence	13801-13833	8	0.758
NZ_AP019692_2	2.13\|1001648\|33\|NZ_AP019692\|PILER-CR	1001648-1001680	33	NC_013945	Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK3, complete sequence	13801-13833	8	0.758
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_LT904880	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3	92025-92056	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_KX833209	Salmonella enterica subsp. enterica serovar Typhi strain Ty004 plasmid pTy004_01, complete sequence	80750-80781	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_LT904895	Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2	23619-23650	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029647	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence	32884-32915	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_LT904853	Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2	100026-100057	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NC_003385	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence	78386-78417	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029859	Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence	42258-42289	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029847	Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence	73726-73757	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029916	Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence	11837-11868	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029893	Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence	39046-39077	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029876	Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence	30639-30670	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029884	Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence	14265-14296	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029961	Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence	68051-68082	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029849	Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence	18468-18499	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029857	Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence	8861-8892	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029929	Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence	82363-82394	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029865	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence	96469-96500	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP048417	Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence	80868-80899	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_LT883154	Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2	41646-41677	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029905	Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence	21892-21923	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029851	Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence	35371-35402	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP040567	Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence	9213-9244	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029889	Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence	9132-9163	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029891	Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence	27411-27442	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029898	Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence	29972-30003	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029951	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence	38450-38481	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029867	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence	24422-24453	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029901	Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence	24065-24096	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP029921	Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence	2576-2607	8	0.75
NZ_AP019692_2	2.40\|1000978\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000978-1001009	32	NZ_CP017724	Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence	19185-19216	8	0.75
NZ_AP019692_2	2.42\|1001100\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001100-1001131	32	MN694547	Marine virus AFVG_250M388, complete genome	17138-17169	8	0.75
NZ_AP019692_2	2.46\|1001344\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001344-1001375	32	KM236241	Citrobacter phage Stevie, complete genome	25546-25577	8	0.75
NZ_AP019692_2	2.50\|1001588\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001588-1001619	32	MH727545	Mycobacterium phage DismalStressor, complete genome	17795-17826	8	0.75
NZ_AP019692_2	2.50\|1001588\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001588-1001619	32	NC_026598	Mycobacterium phage Milly, complete genome	17795-17826	8	0.75
NZ_AP019692_2	2.50\|1001588\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001588-1001619	32	KX688047	Mycobacterium phage Marcoliusprime, complete genome	17795-17826	8	0.75
NZ_AP019692_2	2.50\|1001588\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001588-1001619	32	MF140408	Mycobacterium phage DismalFunk, complete genome	17795-17826	8	0.75
NZ_AP019692_2	2.56\|1001955\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001955-1001986	32	NZ_CP015450	Dietzia lutea strain YIM 80766 plasmid unnamed1, complete sequence	27462-27493	8	0.75
NZ_AP019692_2	2.61\|1002260\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002260-1002291	32	NZ_CP015374	Pandoraea pnomenusa strain MCB032 plasmid unnamed 3, complete sequence	13725-13756	8	0.75
NZ_AP019692_2	2.61\|1002260\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002260-1002291	32	NZ_LR594694	Variovorax sp. WDL1 plasmid 6	17864-17895	8	0.75
NZ_AP019692_2	2.61\|1002260\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002260-1002291	32	NZ_CP010894	Pseudomonas sp. MRSN12121 plasmid, complete sequence	15102-15133	8	0.75
NZ_AP019692_2	2.64\|1002443\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002443-1002474	32	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	1189194-1189225	8	0.75
NZ_AP019692_2	2.70\|1002809\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002809-1002840	32	MK557849	Caudovirales GX15bay, complete genome	6716-6747	8	0.75
NZ_AP019692_2	2.74\|1003053\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1003053-1003084	32	NZ_CP050314	Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence	203281-203312	8	0.75
NZ_AP019692_2	2.75\|1003114\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1003114-1003145	32	MH595538	Vibrio phage BONAISHI, complete genome	189408-189439	8	0.75
NZ_AP019692_3	3.3\|1020118\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020118-1020149	32	NZ_CP015630	Borrelia turicatae strain BTE5EL plasmid lp159	17094-17125	8	0.75
NZ_AP019692_3	3.6\|1020301\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020301-1020332	32	MN694764	Marine virus AFVG_250M267, complete genome	22394-22425	8	0.75
NZ_AP019692_3	3.12\|1020669\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020669-1020700	32	MN657148	Polaromonas sp. strain ANT_J29B plasmid pA29BJ2, complete sequence	12480-12511	8	0.75
NZ_AP019692_3	3.13\|1020730\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020730-1020761	32	NZ_CP032156	Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence	191898-191929	8	0.75
NZ_AP019692_3	3.17\|1020975\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020975-1021006	32	NC_009507	Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence	122651-122682	8	0.75
NZ_AP019692_3	3.19\|1021097\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021097-1021128	32	NZ_CP022418	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3, complete sequence	22515-22546	8	0.75
NZ_AP019692_3	3.28\|1021646\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021646-1021677	32	AY576796	Actinoplanes phage phiAsp2, complete genome	7393-7424	8	0.75
NZ_AP019692_3	3.29\|1021707\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021707-1021738	32	NZ_CP045267	Bacillus megaterium strain FDU301 plasmid pFDU301E, complete sequence	42139-42170	8	0.75
NZ_AP019692_3	3.29\|1021707\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021707-1021738	32	NZ_CP018879	Bacillus megaterium strain JX285 plasmid 6, complete sequence	13908-13939	8	0.75
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_LT904880	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3	92024-92056	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_KX833209	Salmonella enterica subsp. enterica serovar Typhi strain Ty004 plasmid pTy004_01, complete sequence	80750-80782	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_LT904895	Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2	23618-23650	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029647	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence	32884-32916	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_LT904853	Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2	100025-100057	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NC_003385	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence	78386-78418	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029859	Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence	42258-42290	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029847	Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence	73726-73758	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029916	Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence	11837-11869	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029893	Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence	39046-39078	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029876	Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence	30639-30671	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029884	Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence	14265-14297	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029961	Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence	68050-68082	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029849	Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence	18468-18500	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029857	Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence	8860-8892	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029929	Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence	82363-82395	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029865	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence	96469-96501	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP048417	Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence	80868-80900	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_LT883154	Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2	41646-41678	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029905	Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence	21891-21923	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029851	Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence	35370-35402	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP040567	Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence	9212-9244	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029889	Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence	9131-9163	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029891	Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence	27411-27443	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029898	Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence	29972-30004	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029951	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence	38449-38481	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029867	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence	24421-24453	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029901	Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence	24064-24096	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP029921	Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence	2576-2608	9	0.727
NZ_AP019692_2	2.2\|1000977\|33\|NZ_AP019692\|PILER-CR	1000977-1001009	33	NZ_CP017724	Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence	19185-19217	9	0.727
NZ_AP019692_2	2.4\|1001099\|33\|NZ_AP019692\|PILER-CR	1001099-1001131	33	MN694547	Marine virus AFVG_250M388, complete genome	17137-17169	9	0.727
NZ_AP019692_2	2.12\|1001587\|33\|NZ_AP019692\|PILER-CR	1001587-1001619	33	MH727545	Mycobacterium phage DismalStressor, complete genome	17795-17827	9	0.727
NZ_AP019692_2	2.12\|1001587\|33\|NZ_AP019692\|PILER-CR	1001587-1001619	33	NC_026598	Mycobacterium phage Milly, complete genome	17795-17827	9	0.727
NZ_AP019692_2	2.12\|1001587\|33\|NZ_AP019692\|PILER-CR	1001587-1001619	33	KX688047	Mycobacterium phage Marcoliusprime, complete genome	17795-17827	9	0.727
NZ_AP019692_2	2.12\|1001587\|33\|NZ_AP019692\|PILER-CR	1001587-1001619	33	MF140408	Mycobacterium phage DismalFunk, complete genome	17795-17827	9	0.727
NZ_AP019692_2	2.12\|1001587\|33\|NZ_AP019692\|PILER-CR	1001587-1001619	33	MF140411	Mycobacterium phage Findley, complete genome	17798-17830	9	0.727
NZ_AP019692_2	2.18\|1001954\|33\|NZ_AP019692\|PILER-CR	1001954-1001986	33	NZ_CP015450	Dietzia lutea strain YIM 80766 plasmid unnamed1, complete sequence	27462-27494	9	0.727
NZ_AP019692_2	2.30\|1002686\|33\|NZ_AP019692\|PILER-CR	1002686-1002718	33	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	715051-715083	9	0.727
NZ_AP019692_2	2.32\|1002808\|33\|NZ_AP019692\|PILER-CR	1002808-1002840	33	MH986725	Pseudoalteromonas phage DW, complete genome	13382-13414	9	0.727
NZ_AP019692_2	2.46\|1001344\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001344-1001375	32	NZ_CP018310	Vibrio mediterranei strain QT6D1 plasmid unnamed, complete sequence	23980-24011	9	0.719
NZ_AP019692_2	2.46\|1001344\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001344-1001375	32	NZ_CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	669056-669087	9	0.719
NZ_AP019692_2	2.49\|1001527\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001527-1001558	32	NZ_CP009804	Streptomyces sp. FR-008 plasmid pSSFR2, complete sequence	1830-1861	9	0.719
NZ_AP019692_2	2.50\|1001588\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001588-1001619	32	MF140411	Mycobacterium phage Findley, complete genome	17798-17829	9	0.719
NZ_AP019692_2	2.51\|1001649\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001649-1001680	32	NZ_CP042508	Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence	1038-1069	9	0.719
NZ_AP019692_2	2.54\|1001833\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001833-1001864	32	NC_009928	Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence	159374-159405	9	0.719
NZ_AP019692_2	2.64\|1002443\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002443-1002474	32	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	213435-213466	9	0.719
NZ_AP019692_2	2.66\|1002565\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002565-1002596	32	KT264824	Gokushovirus WZ-2015a isolate 76Mky15, complete genome	935-966	9	0.719
NZ_AP019692_2	2.68\|1002687\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002687-1002718	32	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	715052-715083	9	0.719
NZ_AP019692_2	2.70\|1002809\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002809-1002840	32	MH986725	Pseudoalteromonas phage DW, complete genome	13383-13414	9	0.719
NZ_AP019692_2	2.71\|1002870\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002870-1002901	32	NC_028956	Mannheimia phage vB_MhS_1152AP2, complete genome	11720-11751	9	0.719
NZ_AP019692_2	2.77\|1003236\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1003236-1003267	32	MN369756	Gordonia phage Anon, complete genome	19662-19693	9	0.719
NZ_AP019692_3	3.12\|1020669\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020669-1020700	32	MK249146	Blackfly microvirus SF02 isolate 036, complete genome	539-570	9	0.719
NZ_AP019692_3	3.12\|1020669\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020669-1020700	32	MH617089	Microviridae sp. isolate cthd782, complete genome	518-549	9	0.719
NZ_AP019692_3	3.14\|1020791\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020791-1020822	32	NZ_CP027525	Pseudoalteromonas carrageenovora strain KCTC 22325 plasmid pKCTC22325, complete sequence	80307-80338	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_LT904880	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3	92025-92056	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_KX833209	Salmonella enterica subsp. enterica serovar Typhi strain Ty004 plasmid pTy004_01, complete sequence	80750-80781	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_LT904895	Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2	23619-23650	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029647	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence	32884-32915	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_LT904853	Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2	100026-100057	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NC_003385	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence	78386-78417	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029859	Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence	42258-42289	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029847	Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence	73726-73757	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029916	Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence	11837-11868	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029893	Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence	39046-39077	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029876	Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence	30639-30670	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029884	Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence	14265-14296	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029961	Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence	68051-68082	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029849	Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence	18468-18499	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029857	Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence	8861-8892	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029929	Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence	82363-82394	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029865	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence	96469-96500	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP048417	Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence	80868-80899	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_LT883154	Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2	41646-41677	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029905	Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence	21892-21923	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029851	Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence	35371-35402	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP040567	Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence	9213-9244	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029889	Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence	9132-9163	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029891	Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence	27411-27442	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029898	Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence	29972-30003	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029951	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence	38450-38481	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029867	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence	24422-24453	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029901	Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence	24065-24096	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP029921	Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence	2576-2607	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	NZ_CP017724	Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence	19185-19216	9	0.719
NZ_AP019692_3	3.24\|1021402\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021402-1021433	32	HM452126	Aeromonas phage phiAS5, complete genome	123326-123357	9	0.719
NZ_AP019692_2	2.13\|1001648\|33\|NZ_AP019692\|PILER-CR	1001648-1001680	33	NZ_CP042508	Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence	1037-1069	10	0.697
NZ_AP019692_2	2.26\|1002442\|33\|NZ_AP019692\|PILER-CR	1002442-1002474	33	NZ_CP022567	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence	131464-131496	10	0.697
NZ_AP019692_2	2.28\|1002564\|33\|NZ_AP019692\|PILER-CR	1002564-1002596	33	KT264824	Gokushovirus WZ-2015a isolate 76Mky15, complete genome	934-966	10	0.697
NZ_AP019692_2	2.39\|1000917\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1000917-1000948	32	NZ_CP007144	Hymenobacter swuensis DY53 plasmid pHsw1, complete sequence	218648-218679	10	0.688
NZ_AP019692_2	2.42\|1001100\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001100-1001131	32	CP040041	Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence	469068-469099	10	0.688
NZ_AP019692_2	2.64\|1002443\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002443-1002474	32	NZ_CP022567	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence	131465-131496	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP023025	Acinetobacter baumannii strain 10324 plasmid pAba10324c, complete sequence	25509-25540	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP034093	Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence	5124-5155	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP041590	Acinetobacter baumannii strain J9 plasmid pJ9-3, complete sequence	32607-32638	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP038645	Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence	56066-56097	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP039519	Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence	23979-24010	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	CP033517	Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence	85216-85247	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP016301	Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence	17472-17503	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP016296	Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence	17472-17503	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP016299	Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence	17472-17503	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP024125	Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence	55492-55523	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP026128	Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence	69290-69321	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP033864	Acinetobacter sp. FDAARGOS_560 plasmid unnamed2	46788-46819	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP010398	Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence	26152-26183	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP015484	Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence	32096-32127	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP018333	Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence	93523-93554	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP020585	Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence	64259-64290	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NC_023031	Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence	77730-77761	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	CP031744	Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence	32096-32127	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP050905	Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence	37990-38021	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NC_020524	Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence	32096-32127	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP021327	Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence	95569-95600	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_MK386680	Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence	103858-103889	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP018257	Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence	80583-80614	10	0.688
NZ_AP019692_3	3.5\|1020240\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020240-1020271	32	NZ_CP010780	Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence	25160-25191	10	0.688
NZ_AP019692_3	3.6\|1020301\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020301-1020332	32	NZ_CP014946	Psychrobacter alimentarius strain PAMC 27889 plasmid pPAMC27889, complete sequence	5751-5782	10	0.688
NZ_AP019692_3	3.9\|1020486\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020486-1020517	32	NC_017240	Borreliella afzelii PKo plasmid lp32-10, complete sequence	8087-8118	10	0.688
NZ_AP019692_3	3.11\|1020608\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020608-1020639	32	NC_048015	Cyanophage S-TIM4, complete genome	20565-20596	10	0.688
NZ_AP019692_3	3.11\|1020608\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020608-1020639	32	MH512890	Cyanophage S-TIM4	20565-20596	10	0.688
NZ_AP019692_3	3.11\|1020608\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020608-1020639	32	NC_015283	Prochlorococcus phage P-RSM4, complete genome	20538-20569	10	0.688
NZ_AP019692_3	3.13\|1020730\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020730-1020761	32	NZ_CP044178	Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-1	2713-2744	10	0.688
NZ_AP019692_3	3.13\|1020730\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020730-1020761	32	NZ_LN890526	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 3, complete sequence	15208-15239	10	0.688
NZ_AP019692_3	3.17\|1020975\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020975-1021006	32	NZ_CP016619	Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence	187441-187472	10	0.688
NZ_AP019692_3	3.18\|1021036\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021036-1021067	32	NZ_CP019175	Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence	5623-5654	10	0.688
NZ_AP019692_3	3.19\|1021097\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021097-1021128	32	NZ_CP040765	Paracoccus sp. 2251 plasmid unnamed1, complete sequence	87617-87648	10	0.688
NZ_AP019692_3	3.29\|1021707\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021707-1021738	32	NZ_CP023358	Escherichia coli strain 317 plasmid p100, complete sequence	85307-85338	10	0.688
NZ_AP019692_3	3.30\|1021768\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021768-1021799	32	NZ_CP006369	Aureimonas sp. AU20 plasmid pAU20b, complete sequence	112658-112689	10	0.688
NZ_AP019692_3	3.31\|1021829\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1021829-1021860	32	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	343111-343142	10	0.688
NZ_AP019692_3	3.33\|1021952\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1021952-1021983	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
NZ_AP019692_3	3.33\|1021952\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1021952-1021983	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688
NZ_AP019692_2	2.51\|1001649\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1001649-1001680	32	NZ_CP042276	Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence	201362-201393	11	0.656
NZ_AP019692_2	2.67\|1002626\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1002626-1002657	32	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	300567-300598	11	0.656
NZ_AP019692_2	2.75\|1003114\|32\|NZ_AP019692\|CRISPRCasFinder,CRT	1003114-1003145	32	NC_009035	Shewanella baltica OS155 plasmid pSbal01, complete sequence	16787-16818	11	0.656
NZ_AP019692_3	3.13\|1020730\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020730-1020761	32	NZ_CP050084	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence	327573-327604	11	0.656
NZ_AP019692_3	3.13\|1020730\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020730-1020761	32	NC_012853	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132503, complete sequence	189067-189098	11	0.656
NZ_AP019692_3	3.13\|1020730\|32\|NZ_AP019692\|PILER-CR,CRISPRCasFinder,CRT	1020730-1020761	32	NZ_CP053209	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence	405488-405519	11	0.656

1. spacer 3.31|1021829|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008900 (Enterobacter hormaechei subsp. hoffmannii ECNIH3 plasmid pENT-d4a, complete sequence) position: , mismatch: 1, identity: 0.969

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctacagtaaacgtgaatgtgcgtattgacgc	Protospacer
*****.**************************

2. spacer 3.31|1021829|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY978631 (Klebsiella pneumoniae strain 447 plasmid p447-IMP, complete sequence) position: , mismatch: 2, identity: 0.938

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctaccgtaaacgtgaatgtgcgtattgaagc	Protospacer
***** *********************** **

3. spacer 3.31|1021829|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to CP045557 (Citrobacter sp. S39 plasmid pS39-2, complete sequence) position: , mismatch: 2, identity: 0.938

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctaccgtaaacgtgaacgtgcgtattgacgc	Protospacer
***** ***********.**************

4. spacer 3.31|1021829|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022136 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.906

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctacagtaaatgtgaatgtgcgtattgacac	Protospacer
*****.*****.******************.*

5. spacer 3.31|1021829|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029996 (Salmonella enterica subsp. salamae strain SA20053897 plasmid pSA20053897.1, complete sequence) position: , mismatch: 3, identity: 0.906

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctacagtaaatgtgaatgtgcgtattgacac	Protospacer
*****.*****.******************.*

6. spacer 3.31|1021829|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022036 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed1, complete sequence) position: , mismatch: 3, identity: 0.906

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctacagtaaatgtgaatgtgcgtattgacac	Protospacer
*****.*****.******************.*

7. spacer 3.31|1021829|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NC_019335 (Salmonella sp. 14 plasmid p14-95A, complete sequence) position: , mismatch: 3, identity: 0.906

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctacagtaaatgtgaatgtgcgtattgacac	Protospacer
*****.*****.******************.*

8. spacer 3.31|1021829|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NC_019336 (Salmonella sp. 40 plasmid p40-95A, complete sequence) position: , mismatch: 3, identity: 0.906

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
gctacagtaaatgtgaatgtgcgtattgacac	Protospacer
*****.*****.******************.*

9. spacer 2.50|1001588|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MN693196 (Marine virus AFVG_25M118, complete genome) position: , mismatch: 6, identity: 0.812

aaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
aagtcgcggaaatggtggagcgcgttaaggcc	Protospacer
**..* ********  ***************

10. spacer 2.68|1002687|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MF150911 (Ralstonia phage DU_RP_II, complete genome) position: , mismatch: 6, identity: 0.812

gaggcgcgcacggaggctgtgcc-gctacgtga	CRISPR spacer
taggcgcgctcgcaggctgtgccggcgacgcg-	Protospacer
 ******** ** ********** ** ***.*

11. spacer 2.68|1002687|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MN996301 (Ralstonia phage RpY1, complete genome) position: , mismatch: 6, identity: 0.812

gaggcgcgcacggaggctgtgcc-gctacgtga	CRISPR spacer
taggcgcgctcgcaggctgtgccggcgacgcg-	Protospacer
 ******** ** ********** ** ***.*

12. spacer 3.17|1020975|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026282 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-e3cb, complete sequence) position: , mismatch: 6, identity: 0.812

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
catggcggcgctgctggcagcttcaatatggg	Protospacer
*********** ******* ***** * * *

13. spacer 3.17|1020975|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050074 (Enterobacter kobei strain 070 plasmid p070, complete sequence) position: , mismatch: 6, identity: 0.812

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
catggcggcgctgctggcagcttcaatatggg	Protospacer
*********** ******* ***** * * *

14. spacer 3.17|1020975|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041248 (Raoultella electrica strain DSM 102253 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
catggcggcgctgctggcagcttcaatatggg	Protospacer
*********** ******* ***** * * *

15. spacer 3.17|1020975|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011633 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence) position: , mismatch: 6, identity: 0.812

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
catggcggcgctgctggcagcttcaatatggg	Protospacer
*********** ******* ***** * * *

16. spacer 3.17|1020975|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026234 (Citrobacter freundii complex sp. CFNIH4 plasmid pCFR-4109, complete sequence) position: , mismatch: 6, identity: 0.812

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
catggcggcgctgctggcagcttcaatatggg	Protospacer
*********** ******* ***** * * *

17. spacer 3.30|1021768|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NC_009427 (Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence) position: , mismatch: 6, identity: 0.812

cattgctg-ccagccagaagcgcccttcactca	CRISPR spacer
-gttacggcccagccggaagcgcccttcaccca	Protospacer
 .**.* * ******.**************.**

18. spacer 2.12|1001587|33|NZ_AP019692|PILER-CR matches to MN693196 (Marine virus AFVG_25M118, complete genome) position: , mismatch: 7, identity: 0.788

gaaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
aaagtcgcggaaatggtggagcgcgttaaggcc	Protospacer
.**..* ********  ***************

19. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP053440 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence) position: , mismatch: 7, identity: 0.781

ttgaatgcccagagtgtggcaatcactttaca-	CRISPR spacer
ctgaaggcccagggtgtggcaatcg-tctatat	Protospacer
.**** ******.***********. *.**.*

20. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttgaatgcccagagtgtggcaatcactttaca-	CRISPR spacer
ctgaaggcccagggtgtggcaatcg-tctatat	Protospacer
.**** ******.***********. *.**.*

21. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 7, identity: 0.781

ttgaatgcccagagtgtggcaatcactttaca-	CRISPR spacer
ctgaaggcccagggtgtggcaatcg-tctatat	Protospacer
.**** ******.***********. *.**.*

22. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 7, identity: 0.781

ttgaatgcccagagtgtggcaatcactttaca-	CRISPR spacer
ctgaaggcccagggtgtggcaatcg-tctatat	Protospacer
.**** ******.***********. *.**.*

23. spacer 2.51|1001649|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_013944 (Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK1, complete sequence) position: , mismatch: 7, identity: 0.781

ggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
gtccgtgtattcttcatcattgatgttaggat	Protospacer
* ***.************* ******   * *

24. spacer 2.51|1001649|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_013945 (Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK3, complete sequence) position: , mismatch: 7, identity: 0.781

ggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
gtccgtgtattcttcatcattgatgttaggat	Protospacer
* ***.************* ******   * *

25. spacer 2.51|1001649|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_042136 (Vibrio phage VP4B, partial genome) position: , mismatch: 7, identity: 0.781

ggccgcgtattcttcatcagtgat-gtaccgtt	CRISPR spacer
cgctgcgtattcttcagcagtgatcgtagtat-	Protospacer
 **.************ ******* *** ..*

26. spacer 2.61|1002260|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP021139 (Sulfuriferula sp. AH1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

tcacgatatgaatatggggcttacgtgcaacc	CRISPR spacer
tgacaatatgaatatgcggcttacgctcgatc	Protospacer
* **.*********** ********. *.*.*

27. spacer 2.61|1002260|32|NZ_AP019692|CRISPRCasFinder,CRT matches to LC155906 (Achromobacter xylosoxidans plasmid pKUN4507_1 DNA, complete sequence, strain: KUN4507) position: , mismatch: 7, identity: 0.781

tcacgatatgaatatggggcttacgtgcaacc	CRISPR spacer
tgacgatatgaatatgcggcttgcgctcgact	Protospacer
* ************** *****.**. *.**.

28. spacer 2.61|1002260|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_007206 (Haemophilus influenzae biotype aegyptius plasmid pF1947, complete sequence) position: , mismatch: 7, identity: 0.781

tcacgatatgaatatggggcttacgtgcaacc	CRISPR spacer
taacgatatgaatatgtggtttacgctctatc	Protospacer
* ************** **.*****. * *.*

29. spacer 2.61|1002260|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_004846 (Haemophilus influenzae biotype aegyptius plasmid pF3031, complete sequence) position: , mismatch: 7, identity: 0.781

tcacgatatgaatatggggcttacgtgcaacc	CRISPR spacer
taacgatatgaatatgcggtttacgctctatc	Protospacer
* ************** **.*****. * *.*

30. spacer 2.61|1002260|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_004058 (Haemophilus influenzae biotype aegyptius BPF plasmid pF3028, complete sequence) position: , mismatch: 7, identity: 0.781

tcacgatatgaatatggggcttacgtgcaacc	CRISPR spacer
taacgatatgaatatgcggtttacgctctatc	Protospacer
* ************** **.*****. * *.*

31. spacer 2.62|1002321|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MT701590 (Klebsiella phage Miami, complete genome) position: , mismatch: 7, identity: 0.781

ggctgacaa--aatctgccgtcgtctttcttcgc	CRISPR spacer
--acgataaataatctgccgtgttctttcttcgc	Protospacer
   .**.**  **********  ***********

32. spacer 2.71|1002870|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MG945460 (UNVERIFIED: Microviridae sp. isolate 89-1602, complete genome) position: , mismatch: 7, identity: 0.781

gagaataccttgatctaactttat-cggcagca	CRISPR spacer
taacataccttgatctatctttatagggcaac-	Protospacer
 *. ************* ******  ****.*

33. spacer 3.6|1020301|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to MN693991 (Marine virus AFVG_250M861, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactatcctctaa	Protospacer
*.*******.************* **    **

34. spacer 3.6|1020301|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to MN692996 (Marine virus AFVG_117M70, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactatcctctaa	Protospacer
*.*******.************* **    **

35. spacer 3.6|1020301|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to MN694291 (Marine virus AFVG_250M864, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactatcctctaa	Protospacer
*.*******.************* **    **

36. spacer 3.6|1020301|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to MN694083 (Marine virus AFVG_250M863, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactatcctctaa	Protospacer
*.*******.************* **    **

37. spacer 3.6|1020301|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to MN693818 (Marine virus AFVG_250M1205, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactgtcctctaa	Protospacer
*.*******.************* **    **

38. spacer 3.6|1020301|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to MN694793 (Marine virus AFVG_250M862, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactatcctctaa	Protospacer
*.*******.************* **    **

39. spacer 3.6|1020301|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to MN693817 (Marine virus AFVG_250M336, complete genome) position: , mismatch: 7, identity: 0.781

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactatcctctaa	Protospacer
*.*******.************* **    **

40. spacer 3.17|1020975|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 7, identity: 0.781

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
cacggcggcgcggatggcatcttccgtttccg	Protospacer
**.********** **********  *.**

41. spacer 3.17|1020975|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 7, identity: 0.781

-----catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
gcgatcatg-----gcggccggcatcttcatcctcgc	Protospacer
     ****     *****.***********.*****

42. spacer 3.17|1020975|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 7, identity: 0.781

-----catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
gcgatcatg-----gcggccggcatcttcatcctcgc	Protospacer
     ****     *****.***********.*****

43. spacer 3.23|1021341|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

---aatttggatcgccctgagtttaggcgcatggt	CRISPR spacer
gcaaagtc---tcgccctgcgtttgggcgcatggt	Protospacer
   ** *.   ******** ****.**********

44. spacer 2.13|1001648|33|NZ_AP019692|PILER-CR matches to NC_013944 (Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK1, complete sequence) position: , mismatch: 8, identity: 0.758

gggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
tgtccgtgtattcttcatcattgatgttaggat	Protospacer
 * ***.************* ******   * *

45. spacer 2.13|1001648|33|NZ_AP019692|PILER-CR matches to NC_013945 (Staphylococcus simulans bv. staphylolyticus strain NRRL B-2628 plasmid pACK3, complete sequence) position: , mismatch: 8, identity: 0.758

gggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
tgtccgtgtattcttcatcattgatgttaggat	Protospacer
 * ***.************* ******   * *

46. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_LT904880 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

47. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_KX833209 (Salmonella enterica subsp. enterica serovar Typhi strain Ty004 plasmid pTy004_01, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

48. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_LT904895 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

49. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029647 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

50. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_LT904853 (Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

51. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_003385 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

52. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029859 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

53. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029847 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

54. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029916 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

55. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029893 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

56. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029876 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

57. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029884 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

58. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029961 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

59. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029849 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

60. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029857 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

61. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029929 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

62. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029865 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

63. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP048417 (Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

64. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_LT883154 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

65. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029905 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

66. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029851 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

67. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP040567 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

68. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029889 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

69. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029891 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

70. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029898 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

71. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029951 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

72. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029867 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

73. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029901 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

74. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP029921 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

75. spacer 2.40|1000978|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP017724 (Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence) position: , mismatch: 8, identity: 0.75

ttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    **** ********************

76. spacer 2.42|1001100|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MN694547 (Marine virus AFVG_250M388, complete genome) position: , mismatch: 8, identity: 0.75

aggaaaatcattttgcaatgatgagctataac	CRISPR spacer
aggaaaatctttttgcaatgacgattgccgac	Protospacer
********* ***********.** .  ..**

77. spacer 2.46|1001344|32|NZ_AP019692|CRISPRCasFinder,CRT matches to KM236241 (Citrobacter phage Stevie, complete genome) position: , mismatch: 8, identity: 0.75

gcgttcatctgatcgcgatactctgatttttg	CRISPR spacer
ccatgctaatgatcgcgatactttgatttctg	Protospacer
 *.* *   *************.******.**

78. spacer 2.50|1001588|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MH727545 (Mycobacterium phage DismalStressor, complete genome) position: , mismatch: 8, identity: 0.75

aaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
aacagccggaaatgcaggtgcgggttaagcga	Protospacer
**   ************* *** ******  .

79. spacer 2.50|1001588|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_026598 (Mycobacterium phage Milly, complete genome) position: , mismatch: 8, identity: 0.75

aaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
aacagccggaaatgcaggtgcgggttaagcga	Protospacer
**   ************* *** ******  .

80. spacer 2.50|1001588|32|NZ_AP019692|CRISPRCasFinder,CRT matches to KX688047 (Mycobacterium phage Marcoliusprime, complete genome) position: , mismatch: 8, identity: 0.75

aaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
aacagccggaaatgcaggtgcgggttaagcga	Protospacer
**   ************* *** ******  .

81. spacer 2.50|1001588|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MF140408 (Mycobacterium phage DismalFunk, complete genome) position: , mismatch: 8, identity: 0.75

aaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
aacagccggaaatgcaggtgcgggttaagcga	Protospacer
**   ************* *** ******  .

82. spacer 2.56|1001955|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP015450 (Dietzia lutea strain YIM 80766 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ctggtggggatcacgacaatatcagccatttc	CRISPR spacer
gcagtggggaccacgacaacatcagccgcatc	Protospacer
 ..*******.********.*******.. **

83. spacer 2.61|1002260|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP015374 (Pandoraea pnomenusa strain MCB032 plasmid unnamed 3, complete sequence) position: , mismatch: 8, identity: 0.75

tcacgatatgaatatggggcttacgtgcaacc	CRISPR spacer
tgacgatgtgaatatgcggcttacgctcgatg	Protospacer
* *****.******** ********. *.*.

84. spacer 2.61|1002260|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_LR594694 (Variovorax sp. WDL1 plasmid 6) position: , mismatch: 8, identity: 0.75

tcacgatatgaatatggggcttacgtgcaacc	CRISPR spacer
tgacgatgtgaatatgcggcttacgctcgatg	Protospacer
* *****.******** ********. *.*.

85. spacer 2.61|1002260|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP010894 (Pseudomonas sp. MRSN12121 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

tcacgatatgaatatggggcttacgtgcaacc	CRISPR spacer
tgacgatgtgaatatgcggcttacgctcgatg	Protospacer
* *****.******** ********. *.*.

86. spacer 2.64|1002443|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ccatttgctcgccgttccggccgagttctgag	CRISPR spacer
acatatgctcgccggtccggccgaagcctggc	Protospacer
 *** ********* *********. .***.

87. spacer 2.70|1002809|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MK557849 (Caudovirales GX15bay, complete genome) position: , mismatch: 8, identity: 0.75

atgctggatcagccaccacaaccatttaccgg-----	CRISPR spacer
ctgctggatcagcccccacaacca-----cgacgcct	Protospacer
 ************* *********     **.

88. spacer 2.74|1003053|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP050314 (Shewanella aestuarii strain PN3F2 plasmid pPN3F2_1, complete sequence) position: , mismatch: 8, identity: 0.75

--tttgctcaaaaaattagggcaaaggactacag	CRISPR spacer
agcctactt--aaaattagggcaaagggatacag	Protospacer
  ..*.**.  ****************. *****

89. spacer 2.75|1003114|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MH595538 (Vibrio phage BONAISHI, complete genome) position: , mismatch: 8, identity: 0.75

agagcgttt------atatatcgtcattcaccaaaatc	CRISPR spacer
------tttttcgacatatatagtctttcaccaaaatc	Protospacer
      ***      ****** *** ************

90. spacer 3.3|1020118|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015630 (Borrelia turicatae strain BTE5EL plasmid lp159) position: , mismatch: 8, identity: 0.75

atctaggaattaataacaatcagttactatca	CRISPR spacer
attagttaattaataaccatcagttaatatta	Protospacer
**. .  ********** ******** ***.*

91. spacer 3.6|1020301|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to MN694764 (Marine virus AFVG_250M267, complete genome) position: , mismatch: 8, identity: 0.75

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
ccatcaactataatacctttactgtcttctag	Protospacer
*.*******.************* **    *.

92. spacer 3.12|1020669|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to MN657148 (Polaromonas sp. strain ANT_J29B plasmid pA29BJ2, complete sequence) position: , mismatch: 8, identity: 0.75

gccaccagcacgacaaacagcaacgcacgatt	CRISPR spacer
gccaccaccacgacaaacaacaactttctaag	Protospacer
******* ***********.**** . * *

93. spacer 3.13|1020730|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032156 (Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence) position: , mismatch: 8, identity: 0.75

agaccgcgagcagataacgcagctggaggcac	CRISPR spacer
cgcgctagagcagaaaacgcagatggaggcgc	Protospacer
 *  *  ******* ******* *******.*

94. spacer 3.17|1020975|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NC_009507 (Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence) position: , mismatch: 8, identity: 0.75

--catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
gccataat--tgcggctggcatcgtcattgtcgc	Protospacer
  ***...  .************ ***** ****

95. spacer 3.19|1021097|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022418 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-3, complete sequence) position: , mismatch: 8, identity: 0.75

gttatcagatcgttcagcattggcgctttgcc	CRISPR spacer
gcaatcaagtcgttcagcattggcgccgaacc	Protospacer
*. ****..*****************.  .**

96. spacer 3.28|1021646|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to AY576796 (Actinoplanes phage phiAsp2, complete genome) position: , mismatch: 8, identity: 0.75

ccagccctccggggctggttact------cgcagagca	CRISPR spacer
cccgccctcctgggctggttacttggtcccgc------	Protospacer
** ******* ************      ***

97. spacer 3.29|1021707|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045267 (Bacillus megaterium strain FDU301 plasmid pFDU301E, complete sequence) position: , mismatch: 8, identity: 0.75

-----cctgctggctgatgttaaacgtaaaaccagtg	CRISPR spacer
gagagcttg-----tgatgttaaaagtaaaacaagtg	Protospacer
     *.**     ********** ******* ****

98. spacer 3.29|1021707|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018879 (Bacillus megaterium strain JX285 plasmid 6, complete sequence) position: , mismatch: 8, identity: 0.75

-----cctgctggctgatgttaaacgtaaaaccagtg	CRISPR spacer
gagagcttg-----tgatgttaaaagtaaaacaagtg	Protospacer
     *.**     ********** ******* ****

99. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_LT904880 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

100. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_KX833209 (Salmonella enterica subsp. enterica serovar Typhi strain Ty004 plasmid pTy004_01, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

101. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_LT904895 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

102. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029647 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

103. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_LT904853 (Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

104. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NC_003385 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

105. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029859 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

106. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029847 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

107. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029916 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

108. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029893 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

109. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029876 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

110. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029884 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

111. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029961 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

112. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029849 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

113. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029857 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

114. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029929 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

115. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029865 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

116. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP048417 (Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

117. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_LT883154 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

118. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029905 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

119. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029851 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

120. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP040567 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

121. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029889 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

122. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029891 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

123. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029898 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

124. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029951 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

125. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029867 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

126. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029901 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

127. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP029921 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

128. spacer 2.2|1000977|33|NZ_AP019692|PILER-CR matches to NZ_CP017724 (Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence) position: , mismatch: 9, identity: 0.727

gttgaatgcccagagtgtggcaatcactttaca	CRISPR spacer
agccccagccccgagtgtggcaatcactttacc	Protospacer
. .    **** ********************

129. spacer 2.4|1001099|33|NZ_AP019692|PILER-CR matches to MN694547 (Marine virus AFVG_250M388, complete genome) position: , mismatch: 9, identity: 0.727

gaggaaaatcattttgcaatgatgagctataac	CRISPR spacer
aaggaaaatctttttgcaatgacgattgccgac	Protospacer
.********* ***********.** .  ..**

130. spacer 2.12|1001587|33|NZ_AP019692|PILER-CR matches to MH727545 (Mycobacterium phage DismalStressor, complete genome) position: , mismatch: 9, identity: 0.727

gaaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
caacagccggaaatgcaggtgcgggttaagcga	Protospacer
 **   ************* *** ******  .

131. spacer 2.12|1001587|33|NZ_AP019692|PILER-CR matches to NC_026598 (Mycobacterium phage Milly, complete genome) position: , mismatch: 9, identity: 0.727

gaaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
caacagccggaaatgcaggtgcgggttaagcga	Protospacer
 **   ************* *** ******  .

132. spacer 2.12|1001587|33|NZ_AP019692|PILER-CR matches to KX688047 (Mycobacterium phage Marcoliusprime, complete genome) position: , mismatch: 9, identity: 0.727

gaaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
caacagccggaaatgcaggtgcgggttaagcga	Protospacer
 **   ************* *** ******  .

133. spacer 2.12|1001587|33|NZ_AP019692|PILER-CR matches to MF140408 (Mycobacterium phage DismalFunk, complete genome) position: , mismatch: 9, identity: 0.727

gaaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
caacagccggaaatgcaggtgcgggttaagcga	Protospacer
 **   ************* *** ******  .

134. spacer 2.12|1001587|33|NZ_AP019692|PILER-CR matches to MF140411 (Mycobacterium phage Findley, complete genome) position: , mismatch: 9, identity: 0.727

gaaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
gagcagccggaaatgcaggtgcgggttaagcga	Protospacer
**.   ************* *** ******  .

135. spacer 2.18|1001954|33|NZ_AP019692|PILER-CR matches to NZ_CP015450 (Dietzia lutea strain YIM 80766 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

gctggtggggatcacgacaatatcagccatttc	CRISPR spacer
cgcagtggggaccacgacaacatcagccgcatc	Protospacer
  ..*******.********.*******.. **

136. spacer 2.30|1002686|33|NZ_AP019692|PILER-CR matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ggaggcgcgcacggaggctgtgccgctacgtga	CRISPR spacer
ggaggcgggcacagaggctgtgccaggtctcca	Protospacer
******* ****.***********.   * . *

137. spacer 2.32|1002808|33|NZ_AP019692|PILER-CR matches to MH986725 (Pseudoalteromonas phage DW, complete genome) position: , mismatch: 9, identity: 0.727

gatgctggatcagccaccacaaccatttaccgg	CRISPR spacer
gccactggatcagtgaccacaaccatttcgcac	Protospacer
* ..*********. *************  *.

138. spacer 2.46|1001344|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP018310 (Vibrio mediterranei strain QT6D1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gcgttcatctgatcgcgatactctgatttttg	CRISPR spacer
tccctgatctgatcgcgagattctgatttagt	Protospacer
 * .* ************ *.********

139. spacer 2.46|1001344|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP031226 (Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence) position: , mismatch: 9, identity: 0.719

gcgttcatctgatcgcgatactctgatttttg	CRISPR spacer
gcgatcatctgctcgcgatactcacagtacca	Protospacer
*** ******* ***********  * * ...

140. spacer 2.49|1001527|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP009804 (Streptomyces sp. FR-008 plasmid pSSFR2, complete sequence) position: , mismatch: 9, identity: 0.719

ccttctcccggttagcctgggttttgctgcgc	CRISPR spacer
atttctcccgggtagcctggattttctccggc	Protospacer
 .********* ********.**** ..  **

141. spacer 2.50|1001588|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MF140411 (Mycobacterium phage Findley, complete genome) position: , mismatch: 9, identity: 0.719

aaaccccggaaatgcaggagcgcgttaaggcg	CRISPR spacer
agcagccggaaatgcaggtgcgggttaagcga	Protospacer
*.   ************* *** ******  .

142. spacer 2.51|1001649|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP042508 (Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence) position: , mismatch: 9, identity: 0.719

ggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
ggccgcgtattcttcatcggtcatctggtaag	Protospacer
******************.** ** *. ..

143. spacer 2.54|1001833|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_009928 (Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence) position: , mismatch: 9, identity: 0.719

caggaggcggatcaatgagctacatcgacaaa	CRISPR spacer
cgaagctcagatcaatgagctatatcgtcaaa	Protospacer
*....  *.*************.**** ****

144. spacer 2.64|1002443|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 9, identity: 0.719

ccatttgctcgccgttccggccgagttctgag	CRISPR spacer
accagtgctcgccgttccagacgagttcgtcg	Protospacer
 *   *************.* *******   *

145. spacer 2.66|1002565|32|NZ_AP019692|CRISPRCasFinder,CRT matches to KT264824 (Gokushovirus WZ-2015a isolate 76Mky15, complete genome) position: , mismatch: 9, identity: 0.719

gtgagcgaattatcagtagtttcattggtgtt	CRISPR spacer
atactgaaattatccgtagtttctttggtgta	Protospacer
.*.   .******* ******** *******

146. spacer 2.68|1002687|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gaggcgcgcacggaggctgtgccgctacgtga	CRISPR spacer
gaggcgggcacagaggctgtgccaggtctcca	Protospacer
****** ****.***********.   * . *

147. spacer 2.70|1002809|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MH986725 (Pseudoalteromonas phage DW, complete genome) position: , mismatch: 9, identity: 0.719

atgctggatcagccaccacaaccatttaccgg	CRISPR spacer
ccactggatcagtgaccacaaccatttcgcac	Protospacer
 ..*********. *************  *.

148. spacer 2.71|1002870|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 9, identity: 0.719

gagaataccttgatctaactttatcggcagca	CRISPR spacer
taatctgccttgatttaactttatccgcagtt	Protospacer
 *.  *.*******.********** ****.

149. spacer 2.77|1003236|32|NZ_AP019692|CRISPRCasFinder,CRT matches to MN369756 (Gordonia phage Anon, complete genome) position: , mismatch: 9, identity: 0.719

tccgggagcgtgattacctgcccagcgggaaa	CRISPR spacer
agacgaagcgtgatcatctgcccagcgggcag	Protospacer
    *.********.*.************ *.

150. spacer 3.12|1020669|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to MK249146 (Blackfly microvirus SF02 isolate 036, complete genome) position: , mismatch: 9, identity: 0.719

gccaccagcacgacaaacagcaacgcacgatt	CRISPR spacer
accatcagcacgagaaacagcaacagattgct	Protospacer
.***.******** **********. *. ..*

151. spacer 3.12|1020669|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to MH617089 (Microviridae sp. isolate cthd782, complete genome) position: , mismatch: 9, identity: 0.719

gccaccagcacgacaaacagcaacgcacgatt	CRISPR spacer
accatcagcacgagaaacagcaacagatttct	Protospacer
.***.******** **********. *.  .*

152. spacer 3.14|1020791|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027525 (Pseudoalteromonas carrageenovora strain KCTC 22325 plasmid pKCTC22325, complete sequence) position: , mismatch: 9, identity: 0.719

gggacgagaaacgccacttttataccaaaagg	CRISPR spacer
gccagttacaatgccacttttttaccaaaagg	Protospacer
*  *   . **.********* **********

153. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT904880 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

154. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX833209 (Salmonella enterica subsp. enterica serovar Typhi strain Ty004 plasmid pTy004_01, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

155. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT904895 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

156. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029647 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

157. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT904853 (Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

158. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NC_003385 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

159. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029859 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

160. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029847 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

161. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029916 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

162. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029893 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

163. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029876 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

164. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029884 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

165. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029961 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

166. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029849 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

167. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029857 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

168. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029929 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

169. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029865 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

170. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048417 (Citrobacter freundii strain CitB plasmid pA_CitB, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

171. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT883154 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

172. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029905 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

173. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029851 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

174. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040567 (Salmonella enterica subsp. enterica serovar Typhimurium strain SAP17-7299 plasmid pCFSAN059543, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

175. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029889 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

176. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029891 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

177. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029898 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

178. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029951 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

179. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029867 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

180. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029901 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

181. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029921 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

182. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017724 (Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 strain SGSC 2518 isolate SARB61 plasmid pSARB26_01, complete sequence) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
gccccagccccgagtgtggcaatcactttacc	Protospacer
 .    *.** ********************

183. spacer 3.24|1021402|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to HM452126 (Aeromonas phage phiAS5, complete genome) position: , mismatch: 9, identity: 0.719

ttgaatgtccagagtgtggcaatcactttaca	CRISPR spacer
acgaatgtccgaagtgtggcaatcacgatgac	Protospacer
 .********..**************  *.

184. spacer 2.13|1001648|33|NZ_AP019692|PILER-CR matches to NZ_CP042508 (Leclercia adecarboxylata strain E1 plasmid pE1_003, complete sequence) position: , mismatch: 10, identity: 0.697

gggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
tggccgcgtattcttcatcggtcatctggtaag	Protospacer
 ******************.** ** *. ..

185. spacer 2.26|1002442|33|NZ_AP019692|PILER-CR matches to NZ_CP022567 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence) position: , mismatch: 10, identity: 0.697

gccatttgctcgccgttccggccgagttctgag	CRISPR spacer
ggatattgctcgccgagccggccgagttcgcga	Protospacer
*    **********  ************  ..

186. spacer 2.28|1002564|33|NZ_AP019692|PILER-CR matches to KT264824 (Gokushovirus WZ-2015a isolate 76Mky15, complete genome) position: , mismatch: 10, identity: 0.697

ggtgagcgaattatcagtagtttcattggtgtt	CRISPR spacer
tatactgaaattatccgtagtttctttggtgta	Protospacer
 .*.   .******* ******** *******

187. spacer 2.39|1000917|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP007144 (Hymenobacter swuensis DY53 plasmid pHsw1, complete sequence) position: , mismatch: 10, identity: 0.688

cgagcccaaataagccgccaggcgtcgcgaga	CRISPR spacer
ggagcccaaagaagccgccagtcggcttaccg	Protospacer
 ********* ********** ** * ..  .

188. spacer 2.42|1001100|32|NZ_AP019692|CRISPRCasFinder,CRT matches to CP040041 (Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

aggaaaatcattttgcaatgatgagctataac	CRISPR spacer
gagcaaattatttagcaatgatgagctgactt	Protospacer
..* ****.**** *************.   .

189. spacer 2.64|1002443|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP022567 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence) position: , mismatch: 10, identity: 0.688

ccatttgctcgccgttccggccgagttctgag	CRISPR spacer
gatattgctcgccgagccggccgagttcgcga	Protospacer
    **********  ************  ..

190. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023025 (Acinetobacter baumannii strain 10324 plasmid pAba10324c, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

191. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034093 (Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

192. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041590 (Acinetobacter baumannii strain J9 plasmid pJ9-3, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

193. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038645 (Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

194. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039519 (Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

195. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to CP033517 (Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

196. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016301 (Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

197. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016296 (Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

198. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016299 (Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

199. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024125 (Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

200. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026128 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

201. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033864 (Acinetobacter sp. FDAARGOS_560 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

202. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010398 (Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

203. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015484 (Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

204. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018333 (Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

205. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020585 (Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

206. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NC_023031 (Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

207. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to CP031744 (Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

208. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050905 (Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

209. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NC_020524 (Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

210. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021327 (Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

211. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK386680 (Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

212. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018257 (Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

213. spacer 3.5|1020240|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010780 (Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence) position: , mismatch: 10, identity: 0.688

tattaccctttcagaatcttttttggattgct	CRISPR spacer
cttaaccctttcagaagcttgtttggagcttg	Protospacer
. * ************ *** ****** . .

214. spacer 3.6|1020301|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014946 (Psychrobacter alimentarius strain PAMC 27889 plasmid pPAMC27889, complete sequence) position: , mismatch: 10, identity: 0.688

ctatcaactgtaatacctttactttcgaggaa	CRISPR spacer
atatcacctgtcatacctttacttaccgtatg	Protospacer
 ***** **** ************ * . . .

215. spacer 3.9|1020486|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NC_017240 (Borreliella afzelii PKo plasmid lp32-10, complete sequence) position: , mismatch: 10, identity: 0.688

ctcgctaactcccttaaaagggatataataaa	CRISPR spacer
tctaatttttcccttataagggatatattaaa	Protospacer
.... *  .******* ********** ****

216. spacer 3.11|1020608|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NC_048015 (Cyanophage S-TIM4, complete genome) position: , mismatch: 10, identity: 0.688

gtgatattattaacctgtgaactatctaccta	CRISPR spacer
tcaatattagtaacctgtgaaccatcaattgc	Protospacer
 ..****** ************.*** *..

217. spacer 3.11|1020608|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to MH512890 (Cyanophage S-TIM4) position: , mismatch: 10, identity: 0.688

gtgatattattaacctgtgaactatctaccta	CRISPR spacer
tcaatattagtaacctgtgaaccatcaattgc	Protospacer
 ..****** ************.*** *..

218. spacer 3.11|1020608|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NC_015283 (Prochlorococcus phage P-RSM4, complete genome) position: , mismatch: 10, identity: 0.688

gtgatattattaacctgtgaactatctaccta	CRISPR spacer
tcaatattagtaacctgtgaaccatcaattgc	Protospacer
 ..****** ************.*** *..

219. spacer 3.13|1020730|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044178 (Salmonella enterica subsp. enterica serovar Concord strain AR-0407 plasmid pAR-0407-1) position: , mismatch: 10, identity: 0.688

agaccgcgagcagataacgcagctggaggcac	CRISPR spacer
agacagcgagcagctaacgcagcctggacttt	Protospacer
**** ******** *********. *.. . .

220. spacer 3.13|1020730|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN890526 (Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.688

agaccgcgagcagataacgcagctggaggcac	CRISPR spacer
agacagcgagcagctaacgcagcctggacttt	Protospacer
**** ******** *********. *.. . .

221. spacer 3.17|1020975|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016619 (Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

catggcggcgcggctggcatcttcattctcgc	CRISPR spacer
ctcaagagcgcggctgccatctgcattctcat	Protospacer
* ... .********* ***** *******..

222. spacer 3.18|1021036|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019175 (Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence) position: , mismatch: 10, identity: 0.688

ttgacattgttgctgatggcgcagttatgccc	CRISPR spacer
gtgaaattattgctgatggcgcagccagcata	Protospacer
 *** ***.***************..*   .

223. spacer 3.19|1021097|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040765 (Paracoccus sp. 2251 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gttatcagatcgttcagcattggcgctttgcc	CRISPR spacer
agcatcagatcgctctgcattggcgcgatcag	Protospacer
. .*********.** **********  *

224. spacer 3.29|1021707|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023358 (Escherichia coli strain 317 plasmid p100, complete sequence) position: , mismatch: 10, identity: 0.688

cctgctggctgatgttaaacgtaaaaccagtg	CRISPR spacer
cctgctggctgatgttcagcgtagcgttatca	Protospacer
**************** *.****. ...* ..

225. spacer 3.30|1021768|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006369 (Aureimonas sp. AU20 plasmid pAU20b, complete sequence) position: , mismatch: 10, identity: 0.688

cattgctgccagccagaagcgcccttcactca	CRISPR spacer
gtcctcccccagccagatgcgcccttcgctcg	Protospacer
  .. *. ********* *********.***.

226. spacer 3.31|1021829|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gctacggtaaacgtgaatgtgcgtattgacgc	CRISPR spacer
cagccggttaaagtgaatgtgcgtattattgt	Protospacer
    **** ** ***************. .*.

227. spacer 3.33|1021952|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

228. spacer 3.33|1021952|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

229. spacer 2.51|1001649|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_CP042276 (Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence) position: , mismatch: 11, identity: 0.656

ggccgcgtattcttcatcagtgatgtaccgtt	CRISPR spacer
cgccgcgccttcttcatcagtgatccggaagg	Protospacer
 ******. *************** ..  .

230. spacer 2.67|1002626|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 11, identity: 0.656

ctggggatctgcatggactcccgcacgttgcg	CRISPR spacer
accacgatcggcatggactaccgcacgtcctt	Protospacer
 . . **** ********* ********. .

231. spacer 2.75|1003114|32|NZ_AP019692|CRISPRCasFinder,CRT matches to NC_009035 (Shewanella baltica OS155 plasmid pSbal01, complete sequence) position: , mismatch: 11, identity: 0.656

agagcgtttatatatcgtcattcaccaaaatc	CRISPR spacer
cagttttttatacatcgacattcaccaaatat	Protospacer
 .. . ******.**** ***********  .

232. spacer 3.13|1020730|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050084 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence) position: , mismatch: 11, identity: 0.656

agaccgcgagcagataacgcagctggaggcac	CRISPR spacer
cctgcgcgagcagatagcgcatctggaaagcg	Protospacer
    ************.**** *****..

233. spacer 3.13|1020730|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NC_012853 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132503, complete sequence) position: , mismatch: 11, identity: 0.656

agaccgcgagcagataacgcagctggaggcac	CRISPR spacer
tctgcgcgagcagatagcgcacctggaaagcg	Protospacer
    ************.**** *****..

234. spacer 3.13|1020730|32|NZ_AP019692|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053209 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence) position: , mismatch: 11, identity: 0.656

agaccgcgagcagataacgcagctggaggcac	CRISPR spacer
cctgcgcgagcagatagcgcatctggaaagcg	Protospacer
    ************.**** *****..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

111060 : 125462

Morganella_phage(37.5%)

integrase,holin

attL 108231:108246|attR 125632:125647

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
108231:108246	attL	NA	NA	NA	NA
WP_010835592.1\|111060_114030_-	hypothetical protein	F1C5E9	Cronobacter_phage	3.9e-82	35.4
WP_001651021.1\|114039_114360_-	hypothetical protein	NA	NA	NA	NA
WP_001651020.1\|114359_114530_-	hypothetical protein	NA	NA	NA	NA
WP_023223122.1\|114701_115076_-	hypothetical protein	NA	NA	NA	NA
WP_023223121.1\|115175_115451_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_001651019.1\|115443_115932_-	ProQ/FinO family protein	NA	NA	NA	NA
WP_001651017.1\|116145_118908_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	1.6e-295	57.2
WP_001651016.1\|118900_119248_-	hypothetical protein	A0A1B5FPL8	Escherichia_phage	2.1e-32	62.2
WP_010835589.1\|119257_119884_-	2-octaprenylphenol hydroxylase	A0A286S1S7	Klebsiella_phage	1.4e-26	39.0
WP_001651014.1\|119880_120102_-	hypothetical protein	NA	NA	NA	NA
WP_142091757.1\|120098_120362_-\|holin	nicotinic acetylcholine receptor subunit beta	NA	NA	NA	NA
WP_001651013.1\|120358_121042_-	host cell division inhibitor Icd-like protein	A0A0P0ZE80	Stx2-converting_phage	1.2e-07	45.0
WP_001651012.1\|121038_121536_-	hypothetical protein	NA	NA	NA	NA
WP_001651011.1\|121532_121712_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_001651010.1\|121704_122514_-	antA/AntB antirepressor family protein	A0A0R6PJV6	Moraxella_phage	4.3e-28	55.2
WP_001651009.1\|122526_122958_-	hypothetical protein	A0A1W6JPH9	Morganella_phage	1.3e-26	50.3
WP_001651008.1\|122957_123161_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_001651007.1\|123254_124106_-	hypothetical protein	NA	NA	NA	NA
WP_001651006.1\|124202_125462_-\|integrase	site-specific integrase	A0A1W6JPG6	Morganella_phage	2.8e-199	79.4
125632:125647	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1149219 : 1207699

Escherichia_phage(27.27%)

transposase,integrase

attL 1179597:1179613|attR 1213842:1213858

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001650427.1\|1149219_1149801_-\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B5FPC6	Escherichia_phage	1.5e-51	55.8
WP_079780845.1\|1150286_1151135_-	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_020837108.1\|1151210_1151405_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_020837109.1\|1151430_1151922_-	hypothetical protein	NA	NA	NA	NA
WP_032181230.1\|1151918_1152296_-	toxin CbtA	NA	NA	NA	NA
WP_020837111.1\|1152355_1153003_-	hypothetical protein	NA	NA	NA	NA
WP_167692809.1\|1152999_1153341_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_000691981.1\|1153397_1153619_-	DUF987 domain-containing protein	NA	NA	NA	NA
WP_000437750.1\|1153639_1154119_-	DNA repair protein RadC	NA	NA	NA	NA
WP_079780843.1\|1154130_1154601_-	antirestriction protein	A0A1S5R3R9	Pseudomonas_phage	4.8e-11	35.8
WP_001234406.1\|1154868_1155687_-	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	9.7e-44	37.2
WP_001114682.1\|1155806_1156040_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_020837115.1\|1156116_1156569_-	hypothetical protein	NA	NA	NA	NA
WP_001104018.1\|1156628_1157171_-	DUF4339 domain-containing protein	NA	NA	NA	NA
WP_000734138.1\|1157233_1157686_-	hypothetical protein	J7KKK1	Erwinia_phage	1.0e-34	50.8
WP_001020418.1\|1157682_1158135_-	hypothetical protein	NA	NA	NA	NA
WP_040220404.1\|1158170_1158806_-	hypothetical protein	NA	NA	NA	NA
WP_079780841.1\|1158802_1159516_-	sporulation transcriptional regulator SpoIIID	NA	NA	NA	NA
WP_079780839.1\|1159776_1160652_-	GTPase family protein	NA	NA	NA	NA
WP_044067157.1\|1160931_1161315_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	5.4e-13	37.7
WP_032670757.1\|1163109_1165872_+	class I SAM-dependent DNA methyltransferase	Q6NE04	Leptospira_phage	4.8e-119	32.1
WP_032669192.1\|1165886_1167932_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_032669191.1\|1167924_1169103_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_142091765.1\|1169384_1170401_-\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	4.9e-186	99.1
WP_024196074.1\|1170399_1170729_+	acid-activated periplasmic chaperone HdeB	NA	NA	NA	NA
WP_032669189.1\|1170780_1171584_-	aquaporin	M1HWZ0	Paramecium_bursaria_Chlorella_virus	4.8e-11	27.6
WP_002917661.1\|1171637_1173461_-	diol dehydratase reactivase subunit alpha	NA	NA	NA	NA
WP_079780837.1\|1173473_1173899_-	glycerol dehydratase small subunit DhaB3	NA	NA	NA	NA
WP_002917672.1\|1173901_1174486_-	propanediol/glycerol family dehydratase medium subunit	NA	NA	NA	NA
WP_079780836.1\|1174498_1176166_-	propanediol/glycerol family dehydratase large subunit	NA	NA	NA	NA
WP_014599267.1\|1176579_1177008_+	heme-binding protein	NA	NA	NA	NA
WP_023336801.1\|1177029_1178193_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_002917678.1\|1178213_1178567_+	glycerol dehydratase reactivase beta/small subunit family protein	NA	NA	NA	NA
WP_004210508.1\|1178567_1179098_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_023336800.1\|1179075_1181001_-	PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR	NA	NA	NA	NA
1179597:1179613	attL	NA	NA	NA	NA
WP_042922263.1\|1181102_1182200_-	glycerol dehydrogenase	NA	NA	NA	NA
WP_097311115.1\|1183123_1184243_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8
WP_054626250.1\|1184347_1185043_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_007372182.1\|1187096_1188194_-	glycerol dehydrogenase	NA	NA	NA	NA
WP_054626249.1\|1188750_1189821_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_007372179.1\|1189831_1190464_+	dihydroxyacetone kinase ADP-binding subunit DhaL	NA	NA	NA	NA
WP_054626248.1\|1190474_1191893_+	dihydroxyacetone kinase subunit DhaM	NA	NA	NA	NA
WP_032669180.1\|1191967_1193617_+	glycerone kinase	NA	NA	NA	NA
WP_054626247.1\|1193720_1194491_-	siderophore-interacting protein	NA	NA	NA	NA
WP_007372175.1\|1194698_1194896_-	hypothetical protein	NA	NA	NA	NA
WP_004574636.1\|1195360_1196650_-\|transposase	ISL3-like element ISPpu12 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.5e-86	40.4
WP_003821921.1\|1196671_1197184_-	signal peptidase II	NA	NA	NA	NA
WP_004364974.1\|1197187_1198084_-	cation transporter	NA	NA	NA	NA
WP_004364961.1\|1198179_1198587_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_054626246.1\|1198916_1201490_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_000860996.1\|1201580_1202207_-	inovirus Gp2 family protein	NA	NA	NA	NA
WP_079780965.1\|1202478_1203177_-	recombinase family protein	NA	NA	NA	NA
WP_016246231.1\|1204077_1204290_-	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_016246229.1\|1205633_1206395_+	hypothetical protein	NA	NA	NA	NA
WP_142091766.1\|1206457_1207699_-\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	3.7e-103	47.5
1213842:1213858	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1236104 : 1271433

Cronobacter_phage(66.67%)

tRNA,head,holin,terminase,tail,transposase,portal,integrase,plate,capsid

attL 1244081:1244096|attR 1274658:1274673

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023194791.1\|1236104_1236872_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000065257.1\|1236912_1237260_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_001030985.1\|1237416_1238637_-	diguanylate cyclase DgcN	A0A2K8I9Y5	Pseudomonas_phage	5.8e-08	36.2
WP_001212379.1\|1238629_1239148_-	YfiR family protein	NA	NA	NA	NA
WP_001168062.1\|1239586_1240657_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
WP_000225191.1\|1240666_1241788_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_000210991.1\|1241845_1242754_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_000200077.1\|1242714_1243875_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_010989056.1\|1243974_1244022_-	hypothetical protein	NA	NA	NA	NA
1244081:1244096	attL	NA	NA	NA	NA
WP_024132356.1\|1244185_1245178_-\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	1.4e-108	58.2
WP_000185337.1\|1245244_1245550_-	helix-turn-helix transcriptional regulator	A0A0M5M1I9	Salmonella_phage	1.6e-15	47.5
WP_000661531.1\|1245647_1245986_+	hypothetical protein	NA	NA	NA	NA
WP_000645096.1\|1246011_1246344_+	hypothetical protein	NA	NA	NA	NA
WP_000681787.1\|1246353_1246923_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	2.6e-43	46.3
WP_000922120.1\|1246925_1247144_+	hypothetical protein	NA	NA	NA	NA
WP_000994501.1\|1247182_1249840_+	toprim domain-containing protein	A0A077K8T2	Ralstonia_phage	1.2e-244	47.5
WP_001264830.1\|1249867_1250137_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	5.1e-34	78.4
WP_000746494.1\|1250190_1251210_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	1.3e-135	68.5
WP_000019445.1\|1252965_1253946_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_023375469.1\|1254401_1255238_+\|capsid	capsid scaffolding protein	F1BUM4	Cronobacter_phage	3.6e-46	52.3
WP_001176503.1\|1255272_1256301_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	3.7e-133	71.6
WP_001177276.1\|1256312_1257011_+\|terminase	terminase	F1BUM0	Cronobacter_phage	3.6e-63	52.6
WP_000491223.1\|1257109_1257562_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	1.2e-48	64.7
WP_000080871.1\|1257558_1258041_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	2.3e-37	48.7
WP_000606933.1\|1258037_1258742_+	hypothetical protein	F1BUL6	Cronobacter_phage	4.0e-70	59.5
WP_000220184.1\|1258738_1259866_+	DUF2586 family protein	F1BUL5	Cronobacter_phage	8.1e-174	82.9
WP_000166745.1\|1259862_1260318_+	DUF2597 family protein	F1BUL4	Cronobacter_phage	1.7e-58	71.5
WP_001154426.1\|1260330_1260627_+\|holin	phage holin family protein	C7BGD7	Burkholderia_phage	2.4e-16	48.2
WP_000175558.1\|1260623_1260965_+	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	2.2e-50	91.1
WP_000376378.1\|1260964_1261297_+	hypothetical protein	F1BUL2	Cronobacter_phage	4.4e-35	70.0
WP_000411500.1\|1261443_1261701_+	hypothetical protein	A5X9I7	Aeromonas_virus	2.3e-20	61.0
WP_000811100.1\|1261888_1263856_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	1.9e-271	70.7
WP_001002797.1\|1263852_1264182_+	DUF2590 family protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
WP_000136922.1\|1264178_1265363_+\|plate	baseplate J/gp47 family protein	F1BUK6	Cronobacter_phage	2.0e-178	78.1
WP_142091767.1\|1265355_1265943_+	hypothetical protein	F1BUK5	Cronobacter_phage	2.1e-88	81.5
WP_000084303.1\|1265952_1267965_+\|tail	phage tail protein	F1BUK3	Cronobacter_phage	2.1e-148	81.2
WP_057515117.1\|1267967_1268498_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	1.3e-12	31.8
WP_000267954.1\|1268487_1269213_+	hypothetical protein	F1BUK1	Cronobacter_phage	3.8e-68	56.4
WP_000200791.1\|1269184_1269730_+	hypothetical protein	F1BUJ9	Cronobacter_phage	3.5e-58	71.4
WP_000977529.1\|1269729_1271433_+	hypothetical protein	F1BUJ7	Cronobacter_phage	1.7e-223	81.3
1274658:1274673	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1524909 : 1576208

Salmonella_phage(57.35%)

holin,terminase,tail,integrase,capsid

attL 1523928:1523942|attR 1575117:1575131

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1523928:1523942	attL	NA	NA	NA	NA
WP_023205219.1\|1524909_1525983_-	DNA cytosine methyltransferase	Q858D4	Salmonella_phage	5.4e-143	68.2
WP_000200029.1\|1525982_1526204_-	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	1.6e-14	54.3
WP_142091770.1\|1526488_1527055_-	hypothetical protein	NA	NA	NA	NA
WP_142091771.1\|1527051_1527276_-	hypothetical protein	NA	NA	NA	NA
WP_142091772.1\|1527275_1527941_-	DNA methyltransferase	G8C7S6	Escherichia_phage	4.0e-112	89.9
WP_006809793.1\|1527937_1528090_-	DUF1317 family protein	T1SAR0	Salmonella_phage	1.3e-05	44.2
WP_142091773.1\|1528086_1528515_-	regulator	M9NYX4	Enterobacteria_phage	1.0e-68	91.5
WP_142091774.1\|1528511_1529135_-	YqaJ viral recombinase family protein	S0A2A9	Cellulophaga_phage	2.1e-46	49.0
WP_161503855.1\|1529131_1529440_-	hypothetical protein	A0A0F7L7F5	uncultured_marine_virus	2.9e-09	33.3
WP_142091775.1\|1529876_1530161_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.5e-47	93.6
WP_006809788.1\|1530232_1530442_-	cell division protein FtsZ	M9NZE2	Enterobacteria_phage	6.7e-34	95.7
WP_023294196.1\|1530438_1530597_-	hypothetical protein	G8C7T3	Escherichia_phage	5.8e-22	96.2
WP_142091776.1\|1530598_1530808_-	hypothetical protein	NA	NA	NA	NA
WP_045325422.1\|1530954_1531404_-	hypothetical protein	G8C7T5	Escherichia_phage	2.0e-75	98.7
WP_047746403.1\|1531682_1531865_+	hypothetical protein	NA	NA	NA	NA
WP_154400857.1\|1531865_1532030_-	hypothetical protein	NA	NA	NA	NA
WP_023313997.1\|1532454_1532652_+	hypothetical protein	G8C7T7	Escherichia_phage	9.2e-25	93.8
WP_026080590.1\|1532807_1533584_-	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_017383046.1\|1533571_1534114_-	hypothetical protein	NA	NA	NA	NA
WP_142091777.1\|1534209_1534869_-	helix-turn-helix domain-containing protein	K7P8B2	Enterobacteria_phage	3.2e-69	61.5
WP_142091778.1\|1534976_1535195_+	helix-turn-helix transcriptional regulator	I6S1U2	Salmonella_phage	6.8e-13	48.5
WP_023306037.1\|1535282_1535567_+	hypothetical protein	Q5G8T2	Enterobacteria_phage	5.2e-21	57.4
WP_172605413.1\|1535605_1535752_+	hypothetical protein	NA	NA	NA	NA
WP_142091779.1\|1535744_1536830_+	replication protein	E5AGE9	Erwinia_phage	1.6e-86	53.3
WP_142091780.1\|1536826_1538200_+	replicative DNA helicase	E5AGF0	Erwinia_phage	8.4e-165	62.4
WP_048206832.1\|1538204_1538504_+	hypothetical protein	M1FPD5	Enterobacteria_phage	2.8e-17	51.6
WP_172605414.1\|1538500_1538920_+	hypothetical protein	K7P799	Enterobacteria_phage	2.6e-32	53.8
WP_142091782.1\|1538916_1539312_+	hypothetical protein	NA	NA	NA	NA
WP_142091783.1\|1539315_1539909_+	DUF551 domain-containing protein	G8C7V0	Escherichia_phage	2.8e-32	53.1
WP_125387033.1\|1539905_1540148_+	hypothetical protein	NA	NA	NA	NA
WP_142091784.1\|1540396_1540852_+	recombination protein NinB	I6PD71	Cronobacter_phage	1.3e-58	65.6
WP_047731075.1\|1540851_1541022_+	NinE family protein	K7P7K0	Enterobacteria_phage	2.9e-19	90.6
WP_032648651.1\|1541014_1541305_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	1.8e-45	90.6
WP_023296424.1\|1541301_1541664_+	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	4.3e-52	83.2
WP_142091786.1\|1541773_1542271_+	antiterminator	G8C7V7	Escherichia_phage	7.6e-92	97.6
WP_001514183.1\|1542684_1543086_+	hypothetical protein	NA	NA	NA	NA
WP_001514184.1\|1543082_1543358_+\|holin	phage holin family protein	S4TNV9	Salmonella_phage	5.8e-09	41.0
WP_088567027.1\|1543361_1543802_+	lysozyme	A0A0M4R365	Salmonella_phage	2.0e-51	71.8
WP_142091787.1\|1543798_1544185_+	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	3.2e-13	39.5
WP_142091788.1\|1544500_1544998_+	KilA-N domain-containing protein	A0A220NRM9	Escherichia_phage	2.1e-89	93.9
WP_001283924.1\|1544994_1545252_+	hypothetical protein	A0A1V0E5Q1	Salmonella_phage	3.8e-39	100.0
WP_142091789.1\|1545646_1546066_+\|terminase	terminase small subunit	A0A1V0E5Q4	Salmonella_phage	6.2e-63	94.2
WP_059509579.1\|1546062_1547310_+\|terminase	terminase	I6RSK1	Salmonella_phage	3.5e-218	98.6
WP_142091790.1\|1547324_1548677_+	DUF1073 domain-containing protein	H6WRT0	Salmonella_phage	1.9e-230	88.0
WP_020838512.1\|1548630_1549590_+\|capsid	minor capsid protein	H6WRT1	Salmonella_phage	4.6e-178	99.7
WP_142091791.1\|1549605_1550871_+	hypothetical protein	H6WRT2	Salmonella_phage	4.6e-226	94.8
WP_142091792.1\|1550883_1551345_+	hypothetical protein	G0ZND8	Cronobacter_phage	2.2e-61	80.4
WP_022651010.1\|1551357_1552455_+	hypothetical protein	G0ZND9	Cronobacter_phage	8.7e-181	84.4
WP_020838516.1\|1552465_1552750_+	hypothetical protein	A0A1V0E5P8	Salmonella_phage	1.7e-32	75.3
WP_023230831.1\|1552811_1553018_+	hypothetical protein	NA	NA	NA	NA
WP_052934749.1\|1553020_1553422_+	hypothetical protein	I6S619	Salmonella_phage	3.0e-54	75.2
WP_142091793.1\|1553421_1553601_+	DUF551 domain-containing protein	Q5G8X7	Enterobacteria_phage	2.9e-25	88.1
WP_020838522.1\|1553593_1553956_+	hypothetical protein	A0A1V0E5P3	Salmonella_phage	2.4e-63	92.5
WP_020838523.1\|1553963_1554401_+	hypothetical protein	H6WRT9	Salmonella_phage	1.0e-76	99.3
WP_001650226.1\|1554397_1554784_+	hypothetical protein	I6R9A6	Salmonella_phage	2.0e-68	100.0
WP_020838525.1\|1554799_1555345_+	HNH endonuclease	A0A2H4FNF1	Salmonella_phage	3.6e-34	46.3
WP_001650225.1\|1555349_1556090_+	immunoglobulin domain-containing protein	H6WRU1	Salmonella_phage	9.8e-128	96.3
WP_023205069.1\|1556134_1556788_+	hypothetical protein	H6WRU2	Salmonella_phage	1.3e-120	99.5
WP_000065269.1\|1557009_1557738_+	KilA-N domain-containing protein	H6WRU3	Salmonella_phage	3.1e-142	100.0
WP_000360561.1\|1557759_1558128_-	hypothetical protein	H6WRU4	Salmonella_phage	9.4e-39	65.0
WP_000033147.1\|1558347_1558725_-	Arc family DNA-binding protein	I6RSL2	Salmonella_phage	1.3e-64	99.2
WP_070812951.1\|1558840_1559011_+	Arc family DNA-binding protein	I6R9A8	Salmonella_phage	1.6e-22	98.2
WP_070812950.1\|1559003_1559978_+	phage antirepressor Ant	I6S627	Salmonella_phage	1.3e-183	96.9
WP_058116493.1\|1560110_1560485_+	hypothetical protein	A0A1V0E5N7	Salmonella_phage	1.6e-65	98.4
WP_024132274.1\|1560558_1560855_+	hypothetical protein	A0A1V0E5P0	Salmonella_phage	8.6e-43	100.0
WP_000758150.1\|1560937_1561291_+	hypothetical protein	A0A1V0E5P9	Salmonella_phage	9.3e-60	99.1
WP_023135292.1\|1561392_1561779_+	hypothetical protein	I6R0Q4	Salmonella_phage	2.7e-68	99.2
WP_142091794.1\|1561818_1565046_+	tape measure protein	Q5G8W8	Enterobacteria_phage	5.1e-120	40.6
WP_001747800.1\|1565067_1565283_+	hypothetical protein	NA	NA	NA	NA
WP_001747799.1\|1565338_1565686_+\|tail	phage tail protein	H6WRV8	Salmonella_phage	5.7e-62	97.4
WP_016062819.1\|1565696_1565903_+	hypothetical protein	H6WRV9	Salmonella_phage	5.3e-31	100.0
WP_001650217.1\|1565871_1566087_-	hypothetical protein	H6WRW0	Salmonella_phage	2.1e-30	100.0
WP_006754904.1\|1566252_1566957_+\|tail	phage minor tail protein L	H6WRW1	Salmonella_phage	8.4e-137	100.0
WP_142091795.1\|1566956_1567676_+	C40 family peptidase	Q5G8W2	Enterobacteria_phage	9.5e-136	92.5
WP_142091796.1\|1567618_1568146_+\|tail	tail assembly protein	H6WRW3	Salmonella_phage	1.9e-64	82.2
WP_023253411.1\|1568155_1571326_+	host specificity protein J	A0A1V0E5M1	Salmonella_phage	0.0e+00	96.5
WP_001113925.1\|1571334_1572294_+	hypothetical protein	H6WRW5	Salmonella_phage	9.6e-184	100.0
WP_023205075.1\|1572304_1573435_+\|tail	tail fiber domain-containing protein	S4TSP4	Salmonella_phage	1.1e-202	99.7
WP_000973018.1\|1573641_1573755_-	DinI-like family protein	S4TND2	Salmonella_phage	2.1e-10	83.8
WP_000958645.1\|1573782_1574952_-\|integrase	tyrosine-type recombinase/integrase	C6ZR22	Salmonella_phage	2.3e-211	90.0
WP_001590337.1\|1575266_1576208_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	4.1e-147	87.8
1575117:1575131	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1818404 : 1827575

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569166.1\|1818404_1819352_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2
WP_001650057.1\|1819335_1820067_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1820047_1820155_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1820214_1820946_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272850.1\|1821168_1822854_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_000598637.1\|1822850_1823570_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950413.1\|1823616_1824084_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_134928651.1\|1824140_1824671_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703137.1\|1824842_1825301_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_001834389.1\|1825541_1827575_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_6

1907589 : 1913886

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023205661.1\|1907589_1908993_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	26.5
WP_000981469.1\|1909170_1910064_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_023205660.1\|1910440_1911526_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.6e-102	53.9
WP_001023659.1\|1911525_1912425_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.1e-30	36.0
WP_001612007.1\|1912472_1913351_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.9e-107	64.1
WP_001649977.1\|1913355_1913886_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.9e-51	55.9

DBSCAN-SWA_7

2116528 : 2164041

Salmonella_phage(59.62%)

tRNA,head,holin,protease,terminase,tail,transposase,portal,integrase,plate,capsid

attL 2117897:2117911|attR 2140152:2140166

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000004540.1\|2116528_2117635_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476070.1\|2117688_2118150_-	NUDIX hydrolase	NA	NA	NA	NA
2117897:2117911	attL	NA	NA	NA	NA
WP_023138632.1\|2118161_2118491_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_001249412.1\|2118487_2119153_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_023195415.1\|2119324_2120575_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	6.7e-20	92.6
WP_000741325.1\|2120688_2121831_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21929	Phage_21	8.2e-174	80.3
WP_000089141.1\|2121820_2122057_-	excisionase	NA	NA	NA	NA
WP_000008351.1\|2122199_2122739_-	hypothetical protein	A0A192Y8M4	Salmonella_phage	2.6e-98	100.0
WP_142091798.1\|2122875_2123703_-	DUF2303 family protein	Q8HAA2	Salmonella_phage	4.1e-151	98.5
WP_000997190.1\|2123760_2124132_-	hypothetical protein	Q8HAA1	Salmonella_phage	1.1e-63	100.0
WP_001020636.1\|2124944_2125640_-	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	3.2e-128	100.0
WP_001191666.1\|2125737_2125962_+	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.9e-34	100.0
WP_000509731.1\|2125990_2126545_+	hypothetical protein	A0A1C9II13	Salmonella_phage	6.9e-102	100.0
WP_058115948.1\|2126541_2127684_+	Rha family phage regulatory protein	A0A1C9IHV9	Salmonella_phage	1.5e-183	87.9
WP_000620702.1\|2127680_2127905_+	hypothetical protein	A0A1C9II64	Salmonella_phage	3.3e-39	100.0
WP_000104924.1\|2127901_2128861_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.6e-117	80.9
WP_058115947.1\|2128862_2129345_+	PerC family transcriptional regulator	Q8HA95	Salmonella_phage	8.7e-85	97.5
WP_023210475.1\|2129344_2129998_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	3.2e-114	88.9
WP_000779150.1\|2129994_2130384_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	2.4e-61	86.0
WP_134928671.1\|2130400_2131261_+	KilA-N domain-containing protein	A0A192Y6F8	Salmonella_phage	3.5e-161	99.0
WP_135608835.1\|2131268_2132258_+	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	1.3e-191	98.5
WP_023171057.1\|2132288_2133119_+	antitermination protein	A0A1B5FPA5	Escherichia_phage	5.0e-56	43.3
WP_000502119.1\|2133370_2133829_+\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
WP_134928672.1\|2133936_2134860_-	hypothetical protein	A0A1B5FPA3	Escherichia_phage	2.1e-42	56.4
WP_023171055.1\|2135010_2135397_+\|holin	phage holin family protein	A0A192Y8P2	Salmonella_phage	8.9e-56	92.2
WP_000250465.1\|2135383_2135665_+\|holin	phage holin family protein	A0A0U2SHD1	Escherichia_phage	8.2e-19	51.1
WP_134928673.1\|2135664_2136279_+	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	1.1e-108	93.6
WP_134928674.1\|2136275_2136818_+	DUF2514 family protein	NA	NA	NA	NA
WP_023136440.1\|2136920_2137424_+	hypothetical protein	NA	NA	NA	NA
WP_023137451.1\|2137491_2137836_+	HNH endonuclease	K7P7P6	Enterobacteria_phage	3.9e-47	73.9
WP_000919034.1\|2137968_2138433_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	1.3e-48	62.1
WP_077945924.1\|2138386_2140129_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	9.1e-140	44.5
WP_000002706.1\|2140128_2141433_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	5.1e-220	86.9
2140152:2140166	attR	NA	NA	NA	NA
WP_058115942.1\|2141446_2142295_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	9.8e-132	88.6
WP_058115941.1\|2142304_2143522_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	3.2e-200	89.4
WP_000691032.1\|2143565_2143808_+	hypothetical protein	K7PHI6	Enterobacteria_phage	2.7e-10	66.0
WP_000886224.1\|2143807_2144131_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	2.2e-31	57.4
WP_001255650.1\|2144142_2144556_+\|head	phage head closure protein	A0A192Y6C2	Salmonella_phage	3.5e-50	74.8
WP_058115939.1\|2144527_2145040_+	hypothetical protein	Q8HAC8	Salmonella_phage	1.8e-80	86.5
WP_058115938.1\|2145036_2145582_+	hypothetical protein	A0A192Y5U4	Salmonella_phage	8.9e-86	83.6
WP_000497755.1\|2145603_2145768_+	DUF2635 domain-containing protein	Q8HAC6	Salmonella_phage	8.4e-24	96.3
WP_001007994.1\|2145757_2147254_+\|tail	phage tail sheath subtilisin-like domain-containing protein	Q8HAC5	Salmonella_phage	3.0e-277	99.4
WP_000515952.1\|2147253_2147610_+\|tail	phage tail tube protein	A0A192Y8K0	Salmonella_phage	2.6e-62	100.0
WP_000588852.1\|2147606_2147933_+\|tail	phage tail assembly protein	Q8HAC3	Salmonella_phage	2.3e-52	99.1
WP_142091799.1\|2148017_2149946_+\|tail	phage tail tape measure protein	Q8HAC2	Salmonella_phage	0.0e+00	99.2
WP_057517773.1\|2149979_2151320_+	DNA circularization N-terminal domain-containing protein	A0A192Y5U9	Salmonella_phage	1.4e-249	99.1
WP_057517772.1\|2151316_2152375_+\|plate	baseplate protein	A0A192Y7L7	Salmonella_phage	7.3e-201	99.1
WP_001273647.1\|2152374_2152908_+\|plate	phage baseplate assembly protein	Q8HAB9	Salmonella_phage	1.9e-96	99.4
WP_057517771.1\|2152912_2153326_+	phage GP46 family protein	A0A192Y6D0	Salmonella_phage	1.2e-74	99.3
WP_057517770.1\|2153318_2154398_+\|plate	baseplate J/gp47 family protein	A0A192Y6E4	Salmonella_phage	2.5e-204	99.4
WP_142091800.1\|2154400_2154988_+	DUF2313 domain-containing protein	A0A192Y5V3	Salmonella_phage	1.9e-113	99.0
WP_057517769.1\|2154974_2156216_+	hypothetical protein	Q8HAB4	Salmonella_phage	1.2e-53	96.3
WP_057515117.1\|2156218_2156749_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	1.3e-12	31.8
WP_167692799.1\|2156738_2156882_+	hypothetical protein	NA	NA	NA	NA
WP_057515118.1\|2156919_2158053_-	acyltransferase	A0A2H4JA46	uncultured_Caudovirales_phage	1.7e-38	33.8
WP_023171145.1\|2158507_2158927_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	3.8e-36	59.1
WP_057517768.1\|2158929_2160198_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.7e-244	98.8
WP_142091801.1\|2160190_2160862_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	3.1e-80	61.3
WP_001521673.1\|2161115_2161328_+	isocitrate dehydrogenase	Q77Z09	Phage_21	1.5e-20	92.6
WP_023205476.1\|2161771_2162896_+	type III secretion system effector SopF	NA	NA	NA	NA
WP_000019445.1\|2163060_2164041_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4

DBSCAN-SWA_8

2978514 : 3020727

Escherichia_phage(38.24%)

protease,terminase,tail,integrase,plate,lysis

attL 2984384:2984397|attR 3022062:3022075

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001648837.1\|2978514_2979195_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	3.4e-82	71.0
WP_024138909.1\|2979862_2980054_-	DUF2767 family protein	A0A0M4R5C3	Salmonella_phage	5.8e-16	97.7
WP_001530989.1\|2980162_2980597_-	hypothetical protein	NA	NA	NA	NA
WP_047587339.1\|2980952_2981546_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.4e-92	87.4
WP_010835745.1\|2981535_2982360_-	macro domain-containing protein	A0A0M4QWS3	Salmonella_phage	9.8e-153	94.9
WP_010835744.1\|2982356_2984066_-\|tail	tail fiber protein	A0A0U2SAV1	Escherichia_phage	7.6e-91	65.6
WP_000729406.1\|2984062_2984689_-	hypothetical protein	A0A0U2RK03	Escherichia_phage	3.3e-92	71.6
2984384:2984397	attL	NA	NA	NA	NA
WP_001643834.1\|2984672_2985899_-\|plate	baseplate J/gp47 family protein	A0A0U2RJZ0	Escherichia_phage	3.7e-148	63.9
WP_001261467.1\|2985895_2986228_-	hypothetical protein	NA	NA	NA	NA
WP_000026342.1\|2986224_2986941_-	hypothetical protein	NA	NA	NA	NA
WP_010835743.1\|2986937_2987981_-	hypothetical protein	NA	NA	NA	NA
WP_000061271.1\|2987980_2988256_-	hypothetical protein	NA	NA	NA	NA
WP_000011138.1\|2988252_2988969_-	hypothetical protein	A0A0U2JGI7	Escherichia_phage	1.3e-28	36.5
WP_060615704.1\|2988968_2991023_-	hypothetical protein	A0A2R3UAN6	Myoviridae_environmental_samples	1.3e-20	35.8
WP_023136430.1\|2991146_2991734_-	hypothetical protein	NA	NA	NA	NA
WP_001133547.1\|2991733_2992171_-	hypothetical protein	NA	NA	NA	NA
WP_010835740.1\|2992174_2993569_-	hypothetical protein	A0A0U2KD19	Escherichia_phage	1.2e-70	37.0
WP_010835739.1\|2993574_2994513_-	hypothetical protein	A0A0U2SH76	Escherichia_phage	1.9e-51	39.5
WP_031616384.1\|2994496_2994907_-	hypothetical protein	NA	NA	NA	NA
WP_001114360.1\|2994924_2995350_-	hypothetical protein	NA	NA	NA	NA
WP_001643824.1\|2995362_2995848_-	hypothetical protein	NA	NA	NA	NA
WP_001110972.1\|2995912_2996944_-	DUF2184 domain-containing protein	A0A0U2QQI2	Escherichia_phage	1.5e-73	45.5
WP_024142134.1\|2996961_2997834_-	hypothetical protein	NA	NA	NA	NA
WP_010835736.1\|2997854_2999429_-	NUDIX hydrolase	Q6UJ14	Burkholderia_virus	1.7e-20	48.6
WP_010835735.1\|2999429_3000305_-	hypothetical protein	A0A0U2I1R8	Escherichia_phage	1.2e-55	45.8
WP_058652144.1\|3000276_3001707_-	DUF1073 domain-containing protein	A0A0U2S5X9	Escherichia_phage	2.6e-92	37.9
WP_010835733.1\|3001706_3002978_-	hypothetical protein	A0A0U2JTW9	Escherichia_phage	5.1e-84	38.3
WP_010835732.1\|3002967_3003939_-\|terminase	terminase small subunit	I6NV32	Burkholderia_virus	2.0e-24	33.2
WP_024142133.1\|3004034_3004250_-	hypothetical protein	NA	NA	NA	NA
WP_010835731.1\|3004364_3004868_-	hypothetical protein	NA	NA	NA	NA
WP_088759388.1\|3005196_3005640_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	4.7e-53	78.7
WP_020898616.1\|3005660_3006149_-	lysozyme	M9P0E5	Enterobacteria_phage	2.3e-56	67.5
WP_001526513.1\|3006126_3006429_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_000658037.1\|3006631_3006820_-	hypothetical protein	NA	NA	NA	NA
WP_000640103.1\|3007212_3007791_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	2.4e-44	52.0
WP_000717784.1\|3007787_3008081_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	2.1e-33	65.3
WP_001643788.1\|3008077_3008674_-	DUF1367 family protein	H9C173	Pectobacterium_phage	6.5e-82	74.2
WP_000474096.1\|3008742_3008934_-	hypothetical protein	NA	NA	NA	NA
WP_001129735.1\|3009117_3009456_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	3.7e-50	86.6
WP_010835728.1\|3009622_3010225_-	restriction endonuclease subunit M	A0A2R9YJG0	Escherichia_phage	7.8e-99	87.8
WP_000918618.1\|3010217_3010466_-	hypothetical protein	NA	NA	NA	NA
WP_010835727.1\|3010469_3011150_-	hypothetical protein	NA	NA	NA	NA
WP_010835726.1\|3011187_3012576_-	helicase DnaB	Q76H51	Enterobacteria_phage	2.3e-106	47.3
WP_010835725.1\|3012572_3013553_-	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	4.0e-44	79.6
WP_001195066.1\|3013555_3013780_-	hypothetical protein	H9C163	Pectobacterium_phage	1.0e-08	44.7
WP_001643782.1\|3013802_3014249_-	hypothetical protein	H9C162	Pectobacterium_phage	5.5e-25	50.4
WP_023228218.1\|3014313_3014517_-	helix-turn-helix domain-containing protein	K7PHK4	Enterobacteria_phage	4.0e-07	46.6
WP_024142132.1\|3014595_3014997_+	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.5e-37	55.6
WP_010835722.1\|3015651_3015975_+	hypothetical protein	NA	NA	NA	NA
WP_023228220.1\|3015982_3016228_+	hypothetical protein	A0A1B1W282	Salmonella_phage	3.5e-13	53.8
WP_010835721.1\|3016257_3018531_+	hypothetical protein	H9C157	Pectobacterium_phage	1.1e-108	35.3
WP_010835720.1\|3018527_3019082_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	9.8e-48	59.3
WP_000916251.1\|3019084_3019267_+	hypothetical protein	NA	NA	NA	NA
WP_001643772.1\|3019479_3019704_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_010835719.1\|3019704_3020727_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	9.2e-92	53.5
3022062:3022075	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3126023 : 3133337

Ralstonia_phage(16.67%)

integrase,protease

attL 3120629:3120643|attR 3132073:3132087

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3120629:3120643	attL	NA	NA	NA	NA
WP_001539594.1\|3126023_3126401_+\|integrase	integrase	A0A077KET4	Ralstonia_phage	1.2e-20	41.0
WP_001117984.1\|3126562_3126760_+	hypothetical protein	NA	NA	NA	NA
WP_000934064.1\|3126973_3129250_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000520789.1\|3129280_3129601_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000447499.1\|3129924_3130146_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_000125894.1\|3130275_3132222_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	9.1e-40	42.3
3132073:3132087	attR	NA	NA	NA	NA
WP_001201760.1\|3132218_3133337_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9

DBSCAN-SWA_10

3718384 : 3762064

Salmonella_phage(28.57%)

head,holin,protease,terminase,tail,transposase,portal,integrase,capsid

attL 3729754:3729768|attR 3760621:3760635

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000019445.1\|3718384_3719365_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_142091813.1\|3719465_3720575_-\|tail	tail fiber domain-containing protein	S4TSP4	Salmonella_phage	4.5e-193	99.2
WP_001113925.1\|3720585_3721545_-	hypothetical protein	H6WRW5	Salmonella_phage	9.6e-184	100.0
WP_142091814.1\|3721553_3724274_-	DUF1983 domain-containing protein	S4TTF5	Salmonella_phage	0.0e+00	99.9
WP_000682267.1\|3724273_3724672_-	hypothetical protein	S4TR39	Salmonella_phage	8.8e-75	100.0
WP_000967282.1\|3724678_3725263_-	hypothetical protein	S4TND4	Salmonella_phage	1.5e-107	100.0
WP_000729325.1\|3725262_3725856_-	hypothetical protein	S4TSP7	Salmonella_phage	8.7e-111	100.0
WP_000064923.1\|3726021_3726234_+	hypothetical protein	NA	NA	NA	NA
WP_000171561.1\|3726272_3726584_-	hypothetical protein	S4TNM6	Salmonella_phage	1.7e-36	80.2
WP_053533436.1\|3726629_3729920_-\|tail	phage tail tape measure protein	K7PKG1	Enterobacteria_phage	0.0e+00	66.5
3729754:3729768	attL	NA	NA	NA	NA
WP_001805532.1\|3729952_3730408_-	hypothetical protein	A0A0S2SY43	Pseudomonas_phage	8.1e-08	40.8
WP_024134502.1\|3730461_3730740_-	DUF4035 domain-containing protein	S4TND7	Salmonella_phage	1.9e-44	100.0
WP_001129938.1\|3730763_3731135_-\|tail	phage tail protein	S4TSQ0	Salmonella_phage	3.4e-60	92.6
WP_053521184.1\|3731162_3731867_-	immunoglobulin domain-containing protein	K7PHL2	Enterobacterial_phage	9.7e-93	74.4
WP_000133674.1\|3731924_3732272_-	DUF3168 domain-containing protein	S4TTG3	Salmonella_phage	3.1e-44	77.0
WP_000573486.1\|3732268_3732718_-	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	2.1e-72	95.3
WP_020898872.1\|3732714_3733053_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	6.6e-39	70.5
WP_001648719.1\|3733062_3733389_-\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	5.2e-49	85.2
WP_020898873.1\|3733388_3733649_-	hypothetical protein	K7PHI6	Enterobacteria_phage	2.9e-10	66.0
WP_001648716.1\|3733692_3734910_-\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	5.8e-202	89.6
WP_000039020.1\|3734919_3735768_-\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	1.7e-131	87.9
WP_000002707.1\|3735781_3737086_-\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	6.2e-218	85.9
WP_023194832.1\|3737085_3738828_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	9.7e-142	45.2
WP_000919036.1\|3738781_3739246_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	7.4e-49	62.7
WP_023137451.1\|3739378_3739723_-	HNH endonuclease	K7P7P6	Enterobacteria_phage	3.9e-47	73.9
WP_000495546.1\|3739790_3740168_-	hypothetical protein	Q6UAR9	Klebsiella_phage	1.2e-41	66.1
WP_001050802.1\|3740210_3740750_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	3.7e-07	46.6
WP_023137782.1\|3740746_3741373_-	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	7.8e-94	80.2
WP_162264800.1\|3741375_3741717_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	9.6e-46	80.4
WP_001244502.1\|3742202_3742637_-	antitermination protein Q	B6SD39	Bacteriophage	4.5e-40	58.9
WP_079780986.1\|3742941_3745110_-	replication protein	B6SCY1	Bacteriophage	1.6e-173	72.4
WP_000170999.1\|3745113_3745326_-	helix-turn-helix transcriptional regulator	A0A0R6PHL1	Moraxella_phage	6.0e-06	42.9
WP_079780985.1\|3745446_3746070_+	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	6.7e-37	45.3
WP_023135388.1\|3746613_3747138_+	hypothetical protein	C9EH97	Sodalis_phage	8.4e-41	48.8
WP_000051347.1\|3747395_3748298_+	hypothetical protein	NA	NA	NA	NA
WP_079780983.1\|3748300_3749602_+	DUF2800 domain-containing protein	B6SCX9	Bacteriophage	1.0e-132	56.3
WP_079780981.1\|3749616_3750165_+	DUF2815 family protein	Q775A5	Bordetella_phage	7.1e-67	65.4
WP_134928716.1\|3750205_3750730_-	hypothetical protein	NA	NA	NA	NA
WP_079780979.1\|3750752_3752816_+	DNA polymerase	Q775A3	Bordetella_phage	1.6e-276	68.1
WP_079780978.1\|3752821_3753124_+	hypothetical protein	NA	NA	NA	NA
WP_079780976.1\|3753120_3753324_+	hypothetical protein	NA	NA	NA	NA
WP_015406092.1\|3753334_3753556_+	ANR family transcriptional regulator	NA	NA	NA	NA
WP_015406093.1\|3753545_3753788_+	hypothetical protein	NA	NA	NA	NA
WP_079780975.1\|3753771_3754041_+	VRR-NUC domain-containing protein	B6SD64	Bacteriophage	3.9e-26	65.9
WP_079780974.1\|3754043_3754757_-	hypothetical protein	NA	NA	NA	NA
WP_079780973.1\|3754795_3756187_+	DEAD/DEAH box helicase	Q3LZN8	Bacteriophage	1.0e-210	73.0
WP_024136027.1\|3756195_3756372_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_001046411.1\|3756378_3756846_-	hypothetical protein	NA	NA	NA	NA
WP_000772661.1\|3756846_3758019_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	5.0e-110	49.0
WP_001647976.1\|3758363_3759614_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.4e-97	47.2
WP_001285275.1\|3759625_3760729_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	39.8
3760621:3760635	attR	NA	NA	NA	NA
WP_001043667.1\|3761011_3762064_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.6e-113	58.8

DBSCAN-SWA_11

4232986 : 4287610

Salmonella_phage(22.22%)

tRNA,transposase,integrase,tail

attL 4273478:4273493|attR 4290558:4290573

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000749991.1\|4232986_4233952_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	8.2e-66	53.8
WP_023203355.1\|4234430_4235672_+	multidrug efflux MFS transporter MdtM	NA	NA	NA	NA
WP_001033033.1\|4235758_4237030_+	DUF445 domain-containing protein	NA	NA	NA	NA
WP_000233256.1\|4237249_4238434_+	MFS transporter	NA	NA	NA	NA
WP_000068750.1\|4239304_4239976_+	YjiH family protein	NA	NA	NA	NA
WP_000211979.1\|4239972_4240434_+	membrane protein	NA	NA	NA	NA
WP_001113051.1\|4240446_4241619_+	beta-aspartyl-peptidase	NA	NA	NA	NA
WP_000383509.1\|4241737_4242646_+	hypochlorite stress DNA-binding transcriptional regulator HypT	NA	NA	NA	NA
WP_000683243.1\|4242651_4243386_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
WP_000907671.1\|4243624_4244155_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_001094611.1\|4244871_4245885_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_000841654.1\|4245885_4246659_-	Uxu operon transcriptional regulator	NA	NA	NA	NA
WP_017441742.1\|4247008_4247683_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_023205818.1\|4247679_4248141_-	DUF302 domain-containing protein	NA	NA	NA	NA
WP_001651410.1\|4248345_4249257_-	hypothetical protein	NA	NA	NA	NA
WP_001240360.1\|4249532_4250528_-	membrane protein	NA	NA	NA	NA
WP_001651409.1\|4250783_4251389_-	DUF1062 domain-containing protein	NA	NA	NA	NA
WP_001651407.1\|4251875_4252133_+	YjhX family toxin	NA	NA	NA	NA
WP_078055473.1\|4252137_4253769_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000532939.1\|4254328_4255045_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_023205817.1\|4255623_4256631_-	hypothetical protein	NA	NA	NA	NA
WP_023205816.1\|4257527_4259120_-	TnsA endonuclease N-terminal domain-containing protein	NA	NA	NA	NA
WP_000422448.1\|4260265_4260460_-	hypothetical protein	NA	NA	NA	NA
WP_023205815.1\|4260769_4264069_+	hypothetical protein	NA	NA	NA	NA
WP_001651402.1\|4264081_4270402_+	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	1.8e-44	22.1
WP_023205813.1\|4270901_4271918_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001199743.1\|4273090_4273399_-	CcdB family protein	NA	NA	NA	NA
WP_000016244.1\|4273401_4273641_-	type II toxin-antitoxin system CcdA family antitoxin	NA	NA	NA	NA
4273478:4273493	attL	NA	NA	NA	NA
WP_000254751.1\|4273749_4273998_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_167877406.1\|4275299_4277699_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	1.1e-98	32.0
WP_001747644.1\|4277925_4278045_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_047670528.1\|4278059_4278371_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	2.4e-27	70.5
WP_072031783.1\|4278747_4279020_-	ogr/Delta-like zinc finger family protein	A0A2I8TV89	Erwinia_phage	6.3e-08	46.9
WP_047670531.1\|4279025_4279577_-	phage polarity suppression protein	NA	NA	NA	NA
WP_047670534.1\|4279573_4280317_-	Sid	NA	NA	NA	NA
WP_142091823.1\|4280716_4283389_-	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	1.6e-58	34.4
WP_001075576.1\|4283385_4283769_-	DUF5375 family protein	NA	NA	NA	NA
WP_047670540.1\|4283765_4284050_-	hypothetical protein	NA	NA	NA	NA
WP_047670543.1\|4284081_4284441_-	hypothetical protein	NA	NA	NA	NA
WP_001118612.1\|4284433_4284610_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	4.2e-05	55.6
WP_000190567.1\|4284797_4284983_+	hypothetical protein	NA	NA	NA	NA
WP_000455466.1\|4285079_4285310_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_047670546.1\|4285678_4286317_-	hypothetical protein	NA	NA	NA	NA
WP_047670547.1\|4286347_4287610_-\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	8.2e-66	35.4
4290558:4290573	attR	NA	NA	NA	NA

DBSCAN-SWA_12

4580560 : 4627644

Burkholderia_phage(36.36%)

tRNA,plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001182229.1\|4580560_4581559_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_001039337.1\|4581646_4582957_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_000416272.1\|4583203_4583719_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030592.1\|4583817_4584027_-	CsbD family protein	NA	NA	NA	NA
WP_010989093.1\|4584048_4584162_-	hypothetical protein	NA	NA	NA	NA
WP_001128113.1\|4584158_4585484_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646079.1\|4585662_4586271_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002902.1\|4586379_4586748_-	diacylglycerol kinase	NA	NA	NA	NA
WP_000017360.1\|4586918_4589339_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000455249.1\|4589437_4590310_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000019219.1\|4590323_4590821_-	chorismate lyase	NA	NA	NA	NA
WP_000782497.1\|4591001_4591919_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973644.1\|4592082_4593441_-	maltoporin	NA	NA	NA	NA
WP_000179176.1\|4593528_4594638_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_001651229.1\|4594999_4596190_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_023205186.1\|4596321_4597866_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252081.1\|4597880_4598771_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_000982752.1\|4598936_4599347_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_000750805.1\|4599489_4601586_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_001651227.1\|4601585_4602323_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_023888164.1\|4602319_4602988_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_001541297.1\|4603021_4603264_-	outer membrane protein	NA	NA	NA	NA
WP_000790027.1\|4603708_4605358_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000136392.1\|4605746_4607096_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_001651225.1\|4607223_4607571_-	hypothetical protein	Q6QIE8	Burkholderia_phage	7.5e-22	52.6
WP_001226440.1\|4608146_4608434_+	membrane protein	Q6QIC8	Burkholderia_phage	5.1e-16	48.1
WP_001270435.1\|4608436_4609042_+	lytic transglycosylase domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-60	59.9
WP_000777266.1\|4609054_4609369_+	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_000449438.1\|4609527_4609983_+	hypothetical protein	NA	NA	NA	NA
WP_000875314.1\|4609979_4610177_+	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
WP_000729849.1\|4610166_4611594_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.8e-194	70.9
WP_000907495.1\|4611593_4612118_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_001003638.1\|4612169_4612487_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001651222.1\|4612446_4612575_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_023205187.1\|4612671_4615026_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	1.2e-65	30.5
WP_023205188.1\|4615025_4615979_+\|tail	phage tail protein	A4JWL1	Burkholderia_virus	3.9e-36	50.8
WP_001269717.1\|4615978_4616188_+\|tail	tail protein X	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_000818149.1\|4616175_4617219_+	phage late control D family protein	A4JWL3	Burkholderia_virus	5.0e-77	45.9
WP_001651220.1\|4617228_4617951_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
WP_023205189.1\|4618277_4618640_+	GtrA family protein	I1TED9	Salmonella_phage	4.0e-42	70.0
WP_001651217.1\|4618636_4619566_+	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	6.7e-150	84.1
WP_023205190.1\|4619565_4621113_+	hypothetical protein	B9UDL6	Salmonella_phage	1.5e-48	29.9
WP_001093501.1\|4621276_4621636_+	GPW/gp25 family protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_023205192.1\|4621626_4622742_+\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	6.9e-101	52.0
WP_023205193.1\|4622734_4623367_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
WP_023205194.1\|4623369_4625115_+\|tail	tail fiber protein	A0A0M3ULH6	Salmonella_phage	1.4e-52	40.2
WP_044133443.1\|4625119_4625725_+	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_001651210.1\|4625721_4626177_+	hypothetical protein	NA	NA	NA	NA
WP_000587743.1\|4626915_4627644_+	hypothetical protein	A0A292GAQ8	Xanthomonas_phage	3.5e-13	28.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP019692

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection