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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_AP019728 Bacteroides uniformis strain NBRC 113350 plasmid pBUN4, complete sequence 0 crisprs NA 0 0 0 0
NZ_AP019726 Bacteroides uniformis strain NBRC 113350 plasmid pBUN2, complete sequence 0 crisprs RT 0 0 0 1
NZ_AP019725 Bacteroides uniformis strain NBRC 113350 plasmid pBUN1, complete sequence 0 crisprs NA 0 0 0 0
NZ_AP019724 Bacteroides uniformis strain NBRC 113350 1 crisprs cas3,PrimPol,DEDDh,DinG,PD-DExK 0 1 6 2
NZ_AP019727 Bacteroides uniformis strain NBRC 113350 plasmid pBUN3, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_AP019726
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
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Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_AP019726.1|WP_005868911.1|105101_105512_+|hypothetical-protein 105101_105512_+ 136 aa aa 40 NA NA No NA
2. NZ_AP019724
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019724_1 981840-981971 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_AP019724_1 1.1|981889|34|NZ_AP019724|CRISPRCasFinder 981889-981922 34 KX015771 Salmonella phage phSE-5, complete genome 47936-47969 10 0.706
NZ_AP019724_1 1.1|981889|34|NZ_AP019724|CRISPRCasFinder 981889-981922 34 MH729819 Citrobacter phage Sazh, complete genome 30972-31005 10 0.706
NZ_AP019724_1 1.1|981889|34|NZ_AP019724|CRISPRCasFinder 981889-981922 34 KX015770 Salmonella phage phSE-2, complete genome 25755-25788 10 0.706

1. spacer 1.1|981889|34|NZ_AP019724|CRISPRCasFinder matches to KX015771 (Salmonella phage phSE-5, complete genome) position: , mismatch: 10, identity: 0.706

ctgttattctccatttgcagaagtgtagaagtag	CRISPR spacer
tcgttattctccatttgaagaactgttaacacaa	Protospacer
..*************** **** *** .* ..*.

2. spacer 1.1|981889|34|NZ_AP019724|CRISPRCasFinder matches to MH729819 (Citrobacter phage Sazh, complete genome) position: , mismatch: 10, identity: 0.706

ctgttattctccatttgcagaagtgtagaagtag	CRISPR spacer
tcgttattctccatttgaagaactgttaacacaa	Protospacer
..*************** **** *** .* ..*.

3. spacer 1.1|981889|34|NZ_AP019724|CRISPRCasFinder matches to KX015770 (Salmonella phage phSE-2, complete genome) position: , mismatch: 10, identity: 0.706

ctgttattctccatttgcagaagtgtagaagtag	CRISPR spacer
tcgttattctccatttgaagaactgttaacacaa	Protospacer
..*************** **** *** .* ..*.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 974509 : 1006619 30 unidentified_phage(40.0%) integrase,transposase,tRNA attL 966925:966984|attR 998814:998891
DBSCAN-SWA_2 1500034 : 1538961 25 Nonlabens_phage(50.0%) integrase,transposase attL 1529158:1529171|attR 1539214:1539227
DBSCAN-SWA_3 1653141 : 1703850 56 Streptococcus_phage(44.44%) integrase,transposase attL 1644541:1644555|attR 1659253:1659267
DBSCAN-SWA_4 2839288 : 2876987 46 Burkholderia_virus(22.22%) protease,capsid,head,tail,transposase,tRNA,portal,terminase NA
DBSCAN-SWA_5 2909668 : 2966418 47 unidentified_phage(20.0%) integrase,transposase,protease attL 2958640:2958659|attR 2966303:2966322
DBSCAN-SWA_6 4170457 : 4178752 6 Paenibacillus_phage(16.67%) integrase attL 4169129:4169142|attR 4183276:4183289
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Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_AP019724.1|WP_057317067.1|3364557_3364980_-|PcfK-like-protein 3364557_3364980_- 140 aa aa 40 NA NA No NA
NZ_AP019724.1|WP_008654998.1|4330900_4331326_-|hypothetical-protein 4330900_4331326_- 141 aa aa 40 NA NA No NA