CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP023303	Lactobacillus plantarum strain pc-26 plasmid p.pc-2602, complete sequence	0 crisprs	csa3	4
NZ_CP023302	Lactobacillus plantarum strain pc-26 plasmid p.pc-2601, complete sequence	0 crisprs	NA	1
NZ_CP023301	Lactobacillus plantarum strain pc-26 chromosome, complete genome	0 crisprs	csa3,DinG,cas3,DEDDh	7

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 11547

Bacillus_virus(20.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_027822610.1\|1128_1791_+	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_027822611.1\|1926_2211_+	thioredoxin family protein	NA	NA	NA	NA
WP_053339260.1\|2232_3156_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	1.8e-78	46.5
WP_053339259.1\|3171_3822_+	DsbA family oxidoreductase	NA	NA	NA	NA
WP_064972126.1\|3976_4291_+	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	2.8e-15	32.7
WP_027822615.1\|4312_5650_+	NAD(P)/FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-19	23.5
WP_027822616.1\|6155_6518_-	hypothetical protein	NA	NA	NA	NA
WP_027822617.1\|6544_6985_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010495033.1\|7121_7559_+	OsmC family protein	NA	NA	NA	NA
WP_111443464.1\|7576_7993_+	OsmC family protein	NA	NA	NA	NA
WP_080280605.1\|8375_9410_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.8e-42	34.4
WP_072534700.1\|9492_9726_-	UV-resistance	NA	NA	NA	NA
WP_027822894.1\|9839_10151_+	hypothetical protein	NA	NA	NA	NA
WP_016526748.1\|10388_10658_-	hypothetical protein	NA	NA	NA	NA
WP_027822893.1\|10644_11547_-	AAA family ATPase	F0PIG8	Enterococcus_phage	4.1e-27	32.1

DBSCAN-SWA_2

25106 : 26276

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064775086.1\|25106_26276_+	CHAP domain-containing protein	Q4Z9E1	Staphylococcus_phage	3.6e-15	38.6

DBSCAN-SWA_3

30569 : 38703

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_118130432.1\|30569_32708_+	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	3.0e-108	46.4
WP_057138764.1\|32830_33046_+	hypothetical protein	NA	NA	NA	NA
WP_057138765.1\|33049_34174_+	hypothetical protein	NA	NA	NA	NA
WP_118130440.1\|34359_34500_+	hypothetical protein	NA	NA	NA	NA
WP_072534706.1\|34584_35556_-	Nisin resistance protein	A0A2P0ZL68	Lactobacillus_phage	4.7e-13	27.7
WP_057138767.1\|35845_36583_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_057138768.1\|36709_37096_-	hypothetical protein	NA	NA	NA	NA
WP_032809155.1\|37088_37409_-	hypothetical protein	NA	NA	NA	NA
WP_057138769.1\|37401_38703_-	Y-family DNA polymerase	M1Q231	Streptococcus_phage	1.0e-79	39.1

DBSCAN-SWA_4

44552 : 51096

Bacillus_phage(33.33%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_057138793.1\|44552_46703_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	4.7e-45	27.9
WP_085762572.1\|46718_48095_+	HlyD family secretion protein	NA	NA	NA	NA
WP_021353390.1\|49092_49182_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_080379115.1\|49368_50265_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	2.0e-10	28.9
WP_013356291.1\|50541_51096_+	recombinase family protein	A0A1J1J8Z4	Escherichia_phage	2.0e-32	44.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP023302

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

34438 : 42162

Enterococcus_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_112260613.1\|34438_35214_-\|transposase	IS5-like element ISLpl3 family transposase	A0A0N9SHJ4	Paenibacillus_phage	2.1e-27	53.2
WP_013356283.1\|35321_36224_-	YitT family protein	M1Q1P6	Streptococcus_phage	6.3e-52	40.3
WP_046783566.1\|36310_36943_-	recombinase family protein	A0A286S1P7	Klebsiella_phage	3.6e-14	33.2
WP_020923859.1\|37056_37869_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	9.4e-15	29.0
WP_021729932.1\|37996_38947_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	1.9e-99	55.0
WP_010623241.1\|38961_39888_-	ribonucleoside-diphosphate reductase subunit beta	A0A2H4P8A9	Corynebacterium_phage	5.9e-37	32.1
WP_080392116.1\|39993_42162_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	8.1e-255	60.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP023301

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

37590 : 50035

Lactobacillus_phage(37.5%)

terminase,integrase,capsid,tail,portal,head

attL 29971:29983|attR 39612:39624

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
29971:29983	attL	NA	NA	NA	NA
WP_063487674.1\|37590_38745_-\|integrase	site-specific integrase	A0A172LN96	Lactococcus_phage	3.6e-60	37.0
WP_118130519.1\|38801_39488_-	helix-turn-helix domain-containing protein	Q20DG0	Lactobacillus_phage	7.7e-10	49.4
WP_106904620.1\|39613_39802_+	hypothetical protein	NA	NA	NA	NA
39612:39624	attR	NA	NA	NA	NA
WP_080376230.1\|39844_39952_+	hypothetical protein	NA	NA	NA	NA
WP_118130517.1\|40072_40303_+	hypothetical protein	NA	NA	NA	NA
WP_141874778.1\|40316_41117_+	DNA replication protein	NA	NA	NA	NA
WP_141874779.1\|41116_42511_+	virulence protein	A0A0A7RTG3	Clostridium_phage	2.3e-69	34.3
WP_118130709.1\|42656_43136_+	hypothetical protein	NA	NA	NA	NA
WP_054519353.1\|43150_43342_+	hypothetical protein	NA	NA	NA	NA
WP_118130707.1\|43328_43667_+\|head	phage head closure protein	A0A2P0ZLF0	Lactobacillus_phage	2.5e-09	35.6
WP_046947486.1\|43659_44049_+	HNH endonuclease	A0A1J0MFT4	Staphylococcus_phage	1.0e-19	45.6
WP_118130705.1\|44663_45137_+\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_118130703.1\|45133_46837_+\|terminase	terminase large subunit	A0A2H4JBN3	uncultured_Caudovirales_phage	7.0e-121	40.1
WP_080474079.1\|46775_46994_+	hypothetical protein	NA	NA	NA	NA
WP_118130701.1\|47023_48124_+\|portal	phage portal protein	A0A2H4J9Q5	uncultured_Caudovirales_phage	5.5e-50	35.2
WP_118130699.1\|48120_49650_+\|capsid	phage major capsid protein	B8R651	Lactobacillus_phage	2.1e-44	25.8
WP_021356366.1\|49765_50035_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA

DBSCAN-SWA_2

344835 : 456657

111

Tupanvirus(18.18%)

tRNA,bacteriocin,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044428951.1\|344835_345399_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_044428954.1\|345592_346261_+	ribose 5-phosphate isomerase A	NA	NA	NA	NA
WP_027821520.1\|346418_347924_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_013355173.1\|348188_348557_+	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_003641932.1\|348669_349179_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_003643764.1\|349209_350406_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_003641934.1\|350515_350986_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_003641935.1\|351004_351460_+	hypothetical protein	NA	NA	NA	NA
WP_003641936.1\|351563_352136_+	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
WP_011100977.1\|352301_353222_-	ribonucleoside hydrolase RihC	NA	NA	NA	NA
WP_118130736.1\|353358_354258_+	oxidoreductase	NA	NA	NA	NA
WP_053566421.1\|354697_356578_+	hypothetical protein	NA	NA	NA	NA
WP_011679766.1\|356749_357196_-	ribonuclease H	NA	NA	NA	NA
WP_003641940.1\|357433_358960_+	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_015825109.1\|358960_359932_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.7
WP_053566422.1\|360009_361341_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003643773.1\|361806_363324_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_003643774.1\|363338_365168_+	type 1 glycerol-3-phosphate oxidase	NA	NA	NA	NA
WP_003643775.1\|365182_365905_+	aquaporin family protein	M1HWZ0	Paramecium_bursaria_Chlorella_virus	3.2e-30	31.9
WP_118130738.1\|366487_370183_+	MucBP domain-containing protein	NA	NA	NA	NA
WP_095587192.1\|371663_372080_+	EndoU domain-containing protein	NA	NA	NA	NA
WP_053566425.1\|372119_372434_+	hypothetical protein	NA	NA	NA	NA
WP_080373188.1\|372495_372648_+	glycohydrolase toxin TNT-related protein	NA	NA	NA	NA
WP_053566426.1\|372658_373066_+	hypothetical protein	NA	NA	NA	NA
WP_080373231.1\|373566_373905_+	hypothetical protein	NA	NA	NA	NA
WP_011100991.1\|374244_374523_+	hypothetical protein	NA	NA	NA	NA
WP_118130740.1\|374819_375737_+	hypothetical protein	NA	NA	NA	NA
WP_016511577.1\|376461_377004_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_011100988.1\|377018_377282_+	hypothetical protein	NA	NA	NA	NA
WP_003643788.1\|377398_377602_+	hypothetical protein	NA	NA	NA	NA
WP_072534814.1\|377690_377966_+	hypothetical protein	NA	NA	NA	NA
WP_047672646.1\|377983_378370_+	hypothetical protein	NA	NA	NA	NA
WP_057717859.1\|378595_378751_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_072534813.1\|378819_379011_+	hypothetical protein	NA	NA	NA	NA
WP_057136835.1\|379402_379648_+	hypothetical protein	NA	NA	NA	NA
WP_003643792.1\|380222_380642_+	hypothetical protein	NA	NA	NA	NA
WP_063204023.1\|380923_381397_+	hypothetical protein	NA	NA	NA	NA
WP_015379760.1\|381732_382350_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_118130742.1\|382353_383508_-	MFS transporter	NA	NA	NA	NA
WP_011100993.1\|383511_384303_-	HAD family hydrolase	NA	NA	NA	NA
WP_003641965.1\|384373_385246_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_003641966.1\|385405_386221_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_063486820.1\|386746_388123_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_011100995.1\|388167_389352_+	cation:proton antiporter	NA	NA	NA	NA
WP_003641969.1\|389736_389940_+	hypothetical protein	NA	NA	NA	NA
WP_003643803.1\|390174_390327_-	hypothetical protein	NA	NA	NA	NA
WP_003641971.1\|390351_391020_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003641972.1\|391016_391190_-\|bacteriocin	two-peptide bacteriocin plantaricin JK subunit PlnK	NA	NA	NA	NA
WP_003641973.1\|391220_391388_-\|bacteriocin	two-peptide bacteriocin plantaricin JK subunit PlnJ	NA	NA	NA	NA
WP_003641974.1\|392249_392450_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003641975.1\|392577_392745_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003641976.1\|392862_394062_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_118130879.1\|394092_394839_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003641978.1\|395192_395381_+	hypothetical protein	NA	NA	NA	NA
WP_003641979.1\|395716_395863_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_021356664.1\|396053_397382_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_118130877.1\|397382_398126_+	response regulator transcription factor	NA	NA	NA	NA
WP_063204018.1\|398244_398988_+	response regulator transcription factor	NA	NA	NA	NA
WP_015825123.1\|399293_400067_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003643811.1\|400165_400324_-\|bacteriocin	two-peptide bacteriocin plantaricin EF subunit PlnF	NA	NA	NA	NA
WP_003641985.1\|400348_400519_-\|bacteriocin	two-peptide bacteriocin plantaricin EF subunit PlnE	NA	NA	NA	NA
WP_141874781.1\|400821_402936_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	6.0e-45	27.9
WP_057136851.1\|402951_404328_+	HlyD family secretion protein	NA	NA	NA	NA
WP_063204065.1\|404417_405107_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_063204066.1\|405174_405843_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003641991.1\|405929_406610_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_027821496.1\|407517_407721_+	hypothetical protein	NA	NA	NA	NA
WP_063204067.1\|407815_410125_-	ATP-binding domain-containing protein	NA	NA	NA	NA
WP_021356643.1\|410383_411160_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA
WP_003643815.1\|411599_412616_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_003641997.1\|413023_413734_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003641998.1\|413806_415168_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003641999.1\|415174_415363_+	hypothetical protein	NA	NA	NA	NA
WP_003642000.1\|415352_415775_+	DUF3284 domain-containing protein	NA	NA	NA	NA
WP_003643816.1\|415997_417353_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003642002.1\|417370_418807_+	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	9.7e-31	25.5
WP_003642003.1\|418927_419824_+	ROK family protein	NA	NA	NA	NA
WP_003642004.1\|419973_420720_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_063204068.1\|420832_421846_+\|tRNA	tRNA-dihydrouridine synthase family protein	NA	NA	NA	NA
WP_011101008.1\|422201_423434_+	hypothetical protein	NA	NA	NA	NA
WP_003643820.1\|423438_424233_+	hypothetical protein	NA	NA	NA	NA
WP_003642008.1\|424401_425319_+	Ppx/GppA family phosphatase	NA	NA	NA	NA
WP_118130772.1\|425364_426639_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_003642010.1\|426631_427591_+	hypothetical protein	NA	NA	NA	NA
WP_003646490.1\|427612_428317_+	NAD-dependent protein deacylase	NA	NA	NA	NA
WP_118130770.1\|428316_429159_+	DUF72 domain-containing protein	NA	NA	NA	NA
WP_015825136.1\|429762_430152_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_003643823.1\|430473_432525_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	2.7e-90	35.8
WP_003642016.1\|432757_433942_+	multidrug effflux MFS transporter	NA	NA	NA	NA
WP_003642017.1\|434064_434841_+	TatD family hydrolase	NA	NA	NA	NA
WP_063204069.1\|434827_435391_+	ribonuclease M5	NA	NA	NA	NA
WP_003642019.1\|435387_436278_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_003642020.1\|436382_436634_+	Veg protein	NA	NA	NA	NA
WP_003643828.1\|436766_437633_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_015639955.1\|437714_437897_-	hypothetical protein	NA	NA	NA	NA
WP_003642022.1\|437942_438887_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003642023.1\|439154_439853_+	ABC transporter ATP-binding protein	A0A1V0SGN0	Hokovirus	1.2e-15	27.8
WP_003642024.1\|439839_440643_+	metal ABC transporter permease	NA	NA	NA	NA
WP_003642030.1\|440998_441835_+	pur operon repressor	NA	NA	NA	NA
WP_063204070.1\|441903_443286_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L140	Tupanvirus	5.7e-28	33.2
WP_063204071.1\|443521_444346_+	serine hydrolase	NA	NA	NA	NA
WP_003643830.1\|444711_445692_+	ribose-phosphate diphosphokinase	A0A2K9L8D8	Tupanvirus	4.9e-42	36.3
WP_003646506.1\|445974_446997_+	YdcF family protein	NA	NA	NA	NA
WP_003643831.1\|447079_448066_+	lipoprotein	NA	NA	NA	NA
WP_003646508.1\|448235_449045_-	sugar-phosphatase	NA	NA	NA	NA
WP_003643832.1\|449064_450417_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	5.2e-26	32.9
WP_003643833.1\|450431_451364_-	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_003642040.1\|451726_452167_+	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_003642041.1\|452211_452820_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_003642042.1\|452992_454606_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.2e-143	49.9
WP_141874782.1\|454944_456657_-\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	1.1e-92	41.3

DBSCAN-SWA_3

594548 : 603160

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003643940.1\|594548_596246_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	3.9e-55	37.0
WP_003640956.1\|596267_596576_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_003637790.1\|596591_597191_+	recombination protein RecR	NA	NA	NA	NA
WP_003640957.1\|597205_597457_+	YaaL family protein	NA	NA	NA	NA
WP_016510978.1\|597842_598508_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.4e-53	52.7
WP_003640965.1\|598504_598834_+	hypothetical protein	NA	NA	NA	NA
WP_003640966.1\|598850_599870_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.1e-32	33.5
WP_003640967.1\|599894_600242_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.4e-12	33.3
WP_044429290.1\|600340_601237_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	7.5e-82	55.7
WP_003640969.1\|601240_602026_+	acyl-ACP thioesterase	NA	NA	NA	NA
WP_013355240.1\|602164_603160_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	2.0e-51	38.5

DBSCAN-SWA_4

1219241 : 1232011

Lactobacillus_phage(70.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_118130715.1\|1219241_1220471_+	hypothetical protein	A0A2P0ZL72	Lactobacillus_phage	7.1e-216	97.7
WP_072539616.1\|1220561_1221533_-	peptidase S41	A0A2P0ZL68	Lactobacillus_phage	2.0e-181	98.8
WP_003643099.1\|1221718_1222666_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	2.7e-178	100.0
WP_003643097.1\|1223009_1223624_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	6.3e-112	100.0
WP_118130717.1\|1223626_1226065_+	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	0.0e+00	99.5
WP_072539614.1\|1226152_1226713_+	hypothetical protein	A0A2P0ZL75	Lactobacillus_phage	3.5e-101	99.5
WP_013355470.1\|1226783_1227224_-	nucleoside 2-deoxyribosyltransferase	A0A2P0ZL88	Lactobacillus_phage	1.2e-75	97.9
WP_022638020.1\|1227319_1227457_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_080475280.1\|1227614_1228991_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.0e-25	31.4
WP_021356352.1\|1228974_1229667_-	response regulator transcription factor	W8CYM9	Bacillus_phage	5.3e-35	37.6
WP_013355473.1\|1230376_1231042_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_118130719.1\|1231066_1232011_+	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	6.7e-73	45.8

DBSCAN-SWA_5

2054785 : 2117265

Lactobacillus_phage(29.27%)

terminase,integrase,protease,transposase,capsid,tail,portal,head

attL 2102762:2102783|attR 2117443:2117464

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044429853.1\|2054785_2055250_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	8.8e-18	37.2
WP_022638105.1\|2056345_2056723_-	hypothetical protein	A0A2K9VCG4	Lactobacillus_phage	7.9e-17	67.5
WP_022638106.1\|2056709_2057006_-	hypothetical protein	A0A2K9VCD4	Lactobacillus_phage	6.4e-38	74.5
WP_021732622.1\|2058300_2058735_-	hypothetical protein	NA	NA	NA	NA
WP_022638108.1\|2058737_2059187_-	DUF1617 family protein	A0A2P0ZLE0	Lactobacillus_phage	1.8e-20	39.9
WP_112260728.1\|2059208_2064464_-	hypothetical protein	Q6SE68	Lactobacillus_prophage	8.2e-144	59.4
WP_099739626.1\|2064478_2064811_-	hypothetical protein	V5UQS8	Oenococcus_phage	2.2e-42	73.4
WP_141874803.1\|2064854_2065286_-	hypothetical protein	V5USK5	Oenococcus_phage	2.8e-34	55.9
WP_044429853.1\|2065422_2065887_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	8.8e-18	37.2
WP_118130551.1\|2071465_2071729_-	hypothetical protein	V9QKH3	Oenococcus_phage	5.2e-23	64.2
WP_003642826.1\|2071836_2072235_-	hypothetical protein	V9QJA0	Oenococcus_phage	3.0e-46	74.8
WP_118130532.1\|2072334_2072811_-\|tail	phage tail protein	Q6SE73	Lactobacillus_prophage	7.9e-46	59.4
WP_013355729.1\|2072819_2073185_-	hypothetical protein	V5UQS4	Oenococcus_phage	3.0e-29	53.4
WP_013355730.1\|2073184_2073736_-	HK97 gp10 family phage protein	V5URV0	Oenococcus_phage	2.0e-64	62.3
WP_003642822.1\|2073737_2074085_-	hypothetical protein	V5US85	Oenococcus_phage	3.2e-36	62.3
WP_013355731.1\|2074084_2074417_-	hypothetical protein	V9QJ97	Oenococcus_phage	1.8e-12	45.3
WP_003642820.1\|2074428_2074605_-	hypothetical protein	NA	NA	NA	NA
WP_003642819.1\|2074617_2075640_-	hypothetical protein	V5US24	Oenococcus_phage	3.7e-117	62.5
WP_013355732.1\|2075659_2076007_-	hypothetical protein	V5UTH9	Oenococcus_phage	4.4e-30	63.8
WP_013355733.1\|2076021_2076699_-	DUF4355 domain-containing protein	Q6SE80	Lactobacillus_prophage	6.0e-15	32.1
WP_013355734.1\|2076871_2077078_-	hypothetical protein	NA	NA	NA	NA
WP_003642815.1\|2077129_2077408_-	hypothetical protein	NA	NA	NA	NA
WP_013355736.1\|2077382_2079068_-	hypothetical protein	V5US81	Oenococcus_phage	6.5e-119	58.0
WP_024971552.1\|2079214_2079511_-\|protease	ribosomal-processing cysteine protease Prp	D2J003	Enterococcus_phage	1.1e-10	40.2
WP_013355738.1\|2079440_2080949_-\|portal	phage portal protein	V5US18	Oenococcus_phage	1.8e-136	52.0
WP_022638113.1\|2080960_2082199_-\|terminase	PBSX family phage terminase large subunit	M1PG09	Streptococcus_phage	7.1e-139	61.0
WP_022638114.1\|2082188_2082716_-\|terminase	terminase small subunit	O03926	Lactobacillus_phage	5.0e-41	73.1
WP_033607771.1\|2082893_2083073_-	hypothetical protein	E9LUP6	Lactobacillus_phage	4.6e-07	56.9
WP_099447637.1\|2083182_2084013_-	hypothetical protein	NA	NA	NA	NA
WP_118130534.1\|2084524_2084986_-	transcriptional regulator	D6PSV8	Lactobacillus_phage	6.9e-39	56.3
WP_022638117.1\|2085196_2085577_-	hypothetical protein	NA	NA	NA	NA
WP_057138635.1\|2085573_2086092_-	hypothetical protein	O03915	Lactobacillus_phage	2.9e-54	69.1
WP_022638119.1\|2086088_2086376_-	hypothetical protein	NA	NA	NA	NA
WP_003642799.1\|2086372_2087281_-	DnaD domain protein	NA	NA	NA	NA
WP_050578342.1\|2087359_2088220_-	hypothetical protein	A0A0P0IZH9	Lactobacillus_phage	7.8e-76	48.9
WP_022638121.1\|2088143_2089031_-	recombinase RecT	E9LUM3	Lactobacillus_phage	4.6e-63	53.3
WP_022638122.1\|2089033_2089414_-	hypothetical protein	NA	NA	NA	NA
WP_022638123.1\|2089546_2089717_-	hypothetical protein	NA	NA	NA	NA
WP_022638124.1\|2089784_2090297_-	helix-turn-helix transcriptional regulator	D6PST4	Lactobacillus_phage	2.0e-23	39.4
WP_003642793.1\|2090364_2090670_-	DUF771 domain-containing protein	NA	NA	NA	NA
WP_011101086.1\|2091010_2091211_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011101085.1\|2091357_2091594_+	helix-turn-helix transcriptional regulator	A0A0K2CNE2	Brevibacillus_phage	8.5e-09	30.7
WP_013355753.1\|2091631_2091946_+	hypothetical protein	NA	NA	NA	NA
WP_033099030.1\|2092002_2092257_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013355754.1\|2092402_2092906_+	helix-turn-helix transcriptional regulator	S6C481	Thermus_phage	1.7e-22	42.6
WP_013355755.1\|2092920_2093343_+	ImmA/IrrE family metallo-endopeptidase	A0A0S2SXM3	Bacillus_phage	3.0e-12	35.1
WP_013355756.1\|2093449_2094169_+	hypothetical protein	NA	NA	NA	NA
WP_022638126.1\|2094853_2095933_+	hypothetical protein	NA	NA	NA	NA
WP_021356373.1\|2096977_2097355_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_022638128.1\|2097381_2097741_+	hypothetical protein	NA	NA	NA	NA
WP_022638129.1\|2097771_2098053_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_022638130.1\|2098802_2099828_+	hypothetical protein	NA	NA	NA	NA
WP_022638131.1\|2099791_2100670_+	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_057138560.1\|2100776_2101898_+\|integrase	site-specific integrase	D6PSS4	Lactobacillus_phage	1.7e-46	32.4
WP_015380645.1\|2102248_2102455_-	hypothetical protein	NA	NA	NA	NA
2102762:2102783	attL	NA	NA	NA	NA
WP_118130536.1\|2102937_2103798_+	hypothetical protein	NA	NA	NA	NA
WP_118130538.1\|2103774_2104164_-	hypothetical protein	NA	NA	NA	NA
WP_118130540.1\|2104330_2104600_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_118130542.1\|2105009_2106590_-\|capsid	phage major capsid protein	A0A1J0MFW8	Staphylococcus_phage	4.3e-40	33.9
WP_118130544.1\|2106579_2107686_-\|portal	phage portal protein	A0A2H4J9Q5	uncultured_Caudovirales_phage	8.0e-49	33.3
WP_033611503.1\|2107686_2107887_-	hypothetical protein	NA	NA	NA	NA
WP_118130546.1\|2107840_2109544_-\|terminase	terminase large subunit	A0A2H4JBN3	uncultured_Caudovirales_phage	1.1e-121	40.7
WP_118130548.1\|2109540_2110014_-\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_069137353.1\|2110688_2111078_-	HNH endonuclease	A0A1J0MFT4	Staphylococcus_phage	1.0e-19	45.2
WP_118130550.1\|2111070_2111409_-\|head	phage head closure protein	A0A2P0ZLF0	Lactobacillus_phage	1.2e-08	35.6
WP_024971524.1\|2111418_2111601_-	sporulation protein Cse60	NA	NA	NA	NA
WP_024971523.1\|2111625_2112045_-	hypothetical protein	NA	NA	NA	NA
WP_141874804.1\|2112191_2113586_-	virulence protein	A0A0A7RTG3	Clostridium_phage	3.0e-69	34.1
WP_141874805.1\|2113585_2114386_-	DNA replication protein	NA	NA	NA	NA
WP_118130480.1\|2114399_2114630_-	hypothetical protein	NA	NA	NA	NA
WP_118130482.1\|2114750_2114858_-	hypothetical protein	NA	NA	NA	NA
WP_046783487.1\|2114898_2115063_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_118130484.1\|2115059_2115266_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_118130486.1\|2115397_2116015_+	helix-turn-helix transcriptional regulator	A0A1P8BMN9	Lactococcus_phage	3.1e-10	54.5
WP_118130488.1\|2116107_2117265_+\|integrase	site-specific integrase	Q938N9	Temperate_phage	3.0e-54	34.8
2117443:2117464	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2317517 : 2326031

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003645867.1\|2317517_2318096_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.3e-21	33.9
WP_003645866.1\|2318088_2319114_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	2.7e-59	41.0
WP_003642591.1\|2319110_2320565_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.5e-50	34.0
WP_003645864.1\|2320549_2322769_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	4.5e-144	39.3
WP_011101895.1\|2322761_2323442_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_003642588.1\|2323441_2323696_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003642587.1\|2323697_2324429_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4SM18	Cyanophage	1.6e-37	37.3
WP_046811071.1\|2324431_2325562_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_003642585.1\|2325545_2326031_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.3e-16	41.0

DBSCAN-SWA_7

2808255 : 2816542

Streptococcus_phage(16.67%)

bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046811086.1\|2808255_2809368_-	glycerate kinase	W6LM47	Streptococcus_phage	3.0e-35	35.3
WP_044432279.1\|2809503_2810838_+	NAD(P)/FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-26	26.9
WP_063204300.1\|2811032_2811362_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003642490.1\|2811583_2812882_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	3.8e-18	33.6
WP_003643473.1\|2813198_2814488_+	adenylosuccinate synthase	L7Y4J5	Megavirus	3.5e-72	37.0
WP_003642492.1\|2814530_2815508_+	GMP reductase	Q4ZCY7	Staphylococcus_virus	1.4e-137	71.2
WP_063204301.1\|2815600_2816542_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.3e-19	30.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023303

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP023302

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP023301

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection