CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP029749	Streptococcus agalactiae strain PLGBS13 chromosome, complete genome	2 crisprs	cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	1	9	4	1

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP029749_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029749_1

940451-941212

TypeII

II-A

Consensus_repeat	Method
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRT

11 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP029749_1

>merge|NZ_CP029749|1|940451-941212|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAACTCTGTCTCTTTAAGTTGTGATTGAAGAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGCTACCGTCTGCCTATTCCTCATGAGGCTCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAAATGTGCATTCATTTACTTCTCTTGTGTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTAGTAATAAATAATWTTATGGCTTTTATTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGGATGATTTCGATTATGCGGCGGTGGTTGAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAATGTTAATTTCATATCTACATCTTGTTCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACACATAACGTTCAAAAGTTTCCACTAATAGCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCAAACAACATTGGTGATCTTATTGCGGTAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTATTTAAGACGTGATTTAATGTTAAAACTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTACTTGACGAATTGAAGATGACGGAATTTAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCA

>NZ_CP029749|1|1|940451-941146|PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AACTCTGTCTCTTTAAGTTGTGATTGAAGA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GCTACCGTCTGCCTATTCCTCATGAGGCTC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAATGTGCATTCATTTACTTCTCTTGTGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAGTAATAAATAATWTTATGGCTTTTATTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GGATGATTTCGATTATGCGGCGGTGGTTGA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAATGTTAATTTCATATCTACATCTTGTTC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACATAACGTTCAAAAGTTTCCACTAATAGC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCAAACAACATTGGTGATCTTATTGCGGTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTATTTAAGACGTGATTTAATGTTAAAACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACTTGACGAATTGAAGATGACGGAATTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>NZ_CP029749|1|1|940451-941146|CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AACTCTGTCTCTTTAAGTTGTGATTGAAGA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GCTACCGTCTGCCTATTCCTCATGAGGCTC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAATGTGCATTCATTTACTTCTCTTGTGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAGTAATAAATAATWTTATGGCTTTTATTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GGATGATTTCGATTATGCGGCGGTGGTTGA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAATGTTAATTTCATATCTACATCTTGTTC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACATAACGTTCAAAAGTTTCCACTAATAGC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCAAACAACATTGGTGATCTTATTGCGGTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTATTTAAGACGTGATTTAATGTTAAAACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACTTGACGAATTGAAGATGACGGAATTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>NZ_CP029749|1|1|940451-941212|CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AACTCTGTCTCTTTAAGTTGTGATTGAAGA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GCTACCGTCTGCCTATTCCTCATGAGGCTC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAATGTGCATTCATTTACTTCTCTTGTGT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TAGTAATAAATAATWTTATGGCTTTTATTT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	GGATGATTTCGATTATGCGGCGGTGGTTGA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAATGTTAATTTCATATCTACATCTTGTTC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ACATAACGTTCAAAAGTTTCCACTAATAGC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TCAAACAACATTGGTGATCTTATTGCGGTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TTATTTAAGACGTGATTTAATGTTAAAACT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACTTGACGAATTGAAGATGACGGAATTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAGCTAATTCTCATCTCACCGAGATGGATA
GTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029749.1\|WP_001241816.1\|930228_930609_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131381
NZ_CP029749.1\|WP_000590706.1\|939684_940350_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	pfam09711_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_CP029749.1\|WP_000438314.1\|941769_942186_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_CP029749.1\|WP_000180007.1\|947133_947793_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_CP029749.1\|WP_001040087.1\|934376_938489_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
NZ_CP029749.1\|WP_000065321.1\|951641_952745_+\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NZ_CP029749.1\|WP_000914664.1\|930700_931831_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_CP029749.1\|WP_000323544.1\|932572_933343_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_CP029749.1\|WP_000467138.1\|954862_955645_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029749.1\|WP_011058334.1\|941466_941637_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029749.1\|WP_000159234.1\|929832_930204_+\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NZ_CP029749.1\|WP_000621142.1\|947801_948266_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP029749.1\|WP_041970307.1\|952865_953447_-\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040
NZ_CP029749.1\|WP_001019133.1\|942321_944154_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP029749.1\|WP_000929489.1\|938490_939360_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP029749.1\|WP_000523795.1\|931834_932572_+\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738
NZ_CP029749.1\|WP_000665410.1\|948265_948700_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_CP029749.1\|WP_000122194.1\|939356_939698_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP029749.1\|WP_001056394.1\|954214_954826_+\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP029749.1\|WP_000653357.1\|933332_933989_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884

Protein	Function_ID	Function_description	E-value
NZ_CP029749.1\|WP_001241816.1\|930228_930609_+\|hypothetical-protein	gnl\|CDD\|131381	TIGR02328, TIGR02328, conserved hypothetical protein. Members of this protein are found in a small number of taxonomically well separated species, yet are strongly conserved, suggesting lateral gene transfer. Members are found in Treponema denticola, Clostridium acetobutylicum, and several of the Firmicutes. The function of this protein is unknown. [Hypothetical proteins, Conserved].	6.45558e-80
NZ_CP029749.1\|WP_000590706.1\|939684_940350_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.61399e-122
NZ_CP029749.1\|WP_000180007.1\|947133_947793_+\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	2.66997e-33
NZ_CP029749.1\|WP_001040087.1\|934376_938489_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
NZ_CP029749.1\|WP_000065321.1\|951641_952745_+\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	1.82724e-105
NZ_CP029749.1\|WP_000914664.1\|930700_931831_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_CP029749.1\|WP_000323544.1\|932572_933343_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.19143e-132
NZ_CP029749.1\|WP_000653357.1\|933332_933989_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	9.75792e-52
NZ_CP029749.1\|WP_000159234.1\|929832_930204_+\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	6.08694e-28
NZ_CP029749.1\|WP_000621142.1\|947801_948266_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.91796e-19
NZ_CP029749.1\|WP_041970307.1\|952865_953447_-\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	1.12772e-70
NZ_CP029749.1\|WP_001019133.1\|942321_944154_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP029749.1\|WP_000929489.1\|938490_939360_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.54315e-139
NZ_CP029749.1\|WP_000523795.1\|931834_932572_+\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	3.68196e-111
NZ_CP029749.1\|WP_000665410.1\|948265_948700_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	6.40832e-86
NZ_CP029749.1\|WP_000122194.1\|939356_939698_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.38084e-52
NZ_CP029749.1\|WP_001056394.1\|954214_954826_+\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	6.1265e-31
NZ_CP029749.1\|WP_000438314.1\|941769_942186_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	4.64422e-78

>NZ_CP029749.1|WP_000590706.1|939684_940350_+|type-II-A-CRISPR-associated-protein-Csn2
MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
>NZ_CP029749.1|WP_000122194.1|939356_939698_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTETAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNTANNAMIGRLKVNNPKKGNITLLTVTEKQFARMVYLHGERNTSVANSDSRLVFLGDSYDQD
>NZ_CP029749.1|WP_000929489.1|938490_939360_+|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDSYQTEMIHLSEIDILIMETTDIVLSTMLIKRLVDENILVIFCDDKRLPTAMLMPYYARHDSSLQLSRQMSWIEDVKADVWTSIIAQKILNQSFYLGECSFFEKSQSIMNLYHDLEPFDPSNREGHAARIYFNTLFGNDFSREQDNPINAGLDYGYSLLLSMFAREVVKCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIIYENRQSDFVKMKRELFSMFSETYSYNGKEMYLSNIVSDYTKKVIKSLNSDGNGIPEFRI
>NZ_CP029749.1|WP_001040087.1|934376_938489_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MNKPYSIGLDIGTNSVGWSIITDDYKVPAKKMRVLGNTDKEYIKKNLIGALLFDGGNTAADRRLKRTARRRYTRRRNRILYLQEIFAEEMSKVDDSFFHRLEDSFLVEEDKRGSKYPIFATLQEEKDYHEKFSTIYHLRKELADKKEKADLRLIYIALAHIIKFRGHFLIEDDSFDVRNTDISKQYQDFLEIFNTTFENNDLLSQNVDVEAILTDKISKSAKKDRILAQYPNQKSTGIFAEFLKLIVGNQADFKKYFNLEDKTPLQFAKDSYDEDLENLLGQIGDEFADLFSAAKKLYDSVLLSGILTVIDLSTKAPLSASMIQRYDEHREDLKQLKQFVKASLPEKYQEIFADSSKDGYAGYIEGKTNQEAFYKYLSKLLTKQEDSENFLEKIKNEDFLRKQRTFDNGSIPHQVHLTELKAIIRRQSEYYPFLKENQDRIEKILTFRIPYYIGPLAREKSDFAWMTRKTDDSIRPWNFEDLVDKEKSAEAFIHRMTNNDFYLPEEKVLPKHSLIYEKFTVYNELTKVRYKNEQGETYFFDSNIKQEIFDGVFKEHRKVSKKKLLDFLAKEYEEFRIVDVIGLDKENKAFNASLGTYHDLEKILDKDFLDNPDNESILEDIVQTLTLFEDREMIKKRLENYKDLFTESQLKKLYRRHYTGWGRLSAKLINGIRDKESQKTILDYLIDDGRSNRNFMQLINDDGLSFKSIISKAQAGSHSDNLKEVVGELAGSPAIKKGILQSLKIVDELVKVMGYEPEQIVVEMARENQTTNQGRRNSRQRYKLLDDGVKNLASDLNGNILKEYPTDNQALQNERLFLYYLQNGRDMYTGEALDIDNLSQYDIDHIIPQAFIKDDSIDNRVLVSSAKNRGKSDDVPSLEIVKDCKVFWKKLLDAKLMSQRKYDNLTKAERGGLTSDDKARFIQRQLVETRQITKHVARILDERFNNELDSKGRRIRKVKIVTLKSNLVSNFRKEFGFYKIREVNNYHHAHDAYLNAVVAKAILTKYPQLEPEFVYGDYPKYNSYKTRKSATEKLFFYSNIMNFFKTKVTLADGTVVVKDDIEVNNDTGEIVWDKKKHFATVRKVLSYPQNNIVKKTEIQTGGFSKESILAHGNSDKLIPRKTKDIYLDPKKYGGFDSPIVAYSVLVVADIKKGKAQKLKTVTELLGITIMERSRFEKNPSAFLESKGYLNIRADKLIILPKYSLFELENGRRRLLASAGELQKGNELALPTQFMKFLYLASRYNESKGKPEEIEKKQEFVNQHVSYFDDILQLINDFSKRVILADANLEKINKLYQDNKENISVDELANNIINLFTFTSLGAPAAFKFFDKIVDRKRYTSTKEVLNSTLIHQSITGLYETRIDLGKLGED
>NZ_CP029749.1|WP_000653357.1|933332_933989_+|TIGR01906-family-membrane-protein
MKDKLLVVLTWIWIISLATLATIYIAWLIYPIEIQFLKLEKVVYLKAETIYYNFNKLMIYLTHPFISDLNMPSFPSSEDGLKHFADVKYLFTLAHGLFVILTFPVIYFLRRGWKQKSIFLYEGFFKIAIMLPIFIVVCAFLLGFDQFFTLFHEVLFPGDSTWQFNPLTDPVIWILPETFFLHCFIIFLLIYETITIILLIIGRKHLKLRKYKNKMQAL
>NZ_CP029749.1|WP_000323544.1|932572_933343_+|TIGR01457-family-HAD-type-hydrolase
MAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
>NZ_CP029749.1|WP_000523795.1|931834_932572_+|acyl-ACP-thioesterase
MGLLYRETYEVPFYESDTNHYMKLPQLLALALQISAKQSLKLGIGDDIVFKRYGLVWVVTDYIIDIERLPKHAEKIVIETEAKAHNKLLCYRYFYIYGEDGQKIITISSAFVLMDFKTRKIHPVLDDITSIYQSQRIKKVIRGPKYHPIGDSKVKQYHVRYFDLDMNGHVNNSKYLEWMYDVLDLDFLSSHIPKKIDLKYIKEIQYGTDIKSHWYQDGLVTRHDIIGGDAIHAQARIEWQEKKED
>NZ_CP029749.1|WP_000914664.1|930700_931831_+|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIREFRSYDITELRTLYIGGGTPTSISAVQLDYLLTELSRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPGFESRHNLMYWDNVEYYGVGAGASGYLDGIRYRNRGPIQHYLKGVSEGNARLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENNGFIQMTKKGLFLGDTVAEKFIVE
>NZ_CP029749.1|WP_001241816.1|930228_930609_+|hypothetical-protein
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAEYRGMKCPRYDTLNPVDLETPIYPEHNQDYLQECLWNLKAKGIDLPINKIK
>NZ_CP029749.1|WP_000159234.1|929832_930204_+|YbgA-family-protein
MTKEAELLWAKHKYLVLSKSQKIYLDIRQTLKSPNCTVLDVQSLIDQAVLLEESPSQVTNAYMHIWGYFKNKAERQEKEEFLTLLEKYRKTGYQRRKLLAFLKQLLAKYPNSYLQNSSIFEEE
>NZ_CP029749.1|WP_011058334.1|941466_941637_+|hypothetical-protein
MKGYNSNLMVKGLGCSTLYLIISLTALVLLVIAGVFFVINTCKLTRKAVENLSIIN
>NZ_CP029749.1|WP_000438314.1|941769_942186_+|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRYADADILKRHYAELTDRPFFPTLVDYMTSGPVIIGVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
>NZ_CP029749.1|WP_001019133.1|942321_944154_+|elongation-factor-4
MNIEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRAEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGEVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTITLANNPAIEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTRVDSIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDDKK
>NZ_CP029749.1|WP_000180007.1|947133_947793_+|HD-domain-containing-protein
MTMVKREDVILNATENMVHHKLKNDPSGHDWFHIVRVRNLAVELAHKEGANTFICQMAALLHDIIDDKICQDSKQASYELTQWLYSQDLAIAEVEHILDILENISFKAGTGLTMKTLEGQIVQDADRLDAMGAIGIARTMAYSGSKGRLIHDPNLKPRENLTLEEYRNGQDTAIMHFYEKLLKLKDLMNTKQGKMLAQKRHDFLELYLAEFYAEWNGKR
>NZ_CP029749.1|WP_000621142.1|947801_948266_+|GNAT-family-N-acetyltransferase
MIRRAKEKDLPDIAELLKQILMLHHEVRPDIFHTRGSKFSKEQLKEMLIDESKPIFVYESDEGKVVAHLFLQLQEKRDLPRKSFKTLYIDDLCIDEEVRGQQIGQKLMDFARQYAKKHGCYNITLNVWNDNQRAVSFYEKLGFKPQQTQMEEIL
>NZ_CP029749.1|WP_000665410.1|948265_948700_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD
>NZ_CP029749.1|WP_000065321.1|951641_952745_+|DUF2974-domain-containing-protein
MSNIITYLKNNSNLTFDELALNDVDILCLNEFGYISFEKLINTTEMKSVLVCELYHEYLQTMAKSYSFMFTSQRHDLCQLMMTSKRFKNLTLSYYRAEISLEFEKQFAAMVFTIPNINYHQVVFRGTDANLIGWKEDFKLTYMREISAHRSAIKYLNTILPYFDKVVLSGHSKGGNLALYAAMFTKPDLKAKIDLIWLIDSPGLQKTLLPTTEYKTTKQKCIRLLPEESIVGMMLYSDIEPLIISSNARGILQHDVTTWEIQEPAILKTGTGLSLKSICFEKTFQQWMAELKSQERKLFFDLLFDSFLSSGVSSLDDFNLASRAKMMKAFHSFRELDDDKKRLFNKSLKLLVTIFWGAYHDNSRETK
>NZ_CP029749.1|WP_041970307.1|952865_953447_-|CatB-related-O-acetyltransferase
MRTDMSTGASYPKYGFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTITGLNHPTDHITTNPFIYYKSRGFINEDRADLIDEKKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDIPDYAVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL
>NZ_CP029749.1|WP_001056394.1|954214_954826_+|TVP38/TMEM64-family-protein
MNMKLSKRYRFWQKVIKALGVLALIATLVLVVYLYKLGILNDSNELKDLVHKYEFWGPMIFIVAQIVQIVFPVIPGGVTTVAGFLIFGPTLGFIYNYIGIIIGSVILFWLVKFYGRKFVLLFMDQKTFDKYESKLETSGYEKFFIFCMASPISPADIMVMITGLSNMSIKRFVTIIMITKPISIIGYSYLWIYGGDILKNFLN
>NZ_CP029749.1|WP_000467138.1|954862_955645_-|hypothetical-protein
MFGKLLKYELKSVGKWYLTLNAAVLLVSIILGLVLKALGGNFSTDTNSTSAQIFTIILVLLLAMVISGSLLSTLAIIIKRFYSNIFGRQGYLTLTLPVTTNQIICSKLLASLLWSIFNIFIVIIGIILVILPLVGIGQFVVAFPEIYKIISSSNAPLFIAYFFLSYVAGTLLIYLSIAVGQLFTNKRVLMGIVSYFGISLLITFLTLIIDSIFHIDLFNSHANATFSQPVLLYNILVSIVEIAIFYMLTHSIIKYKLNIQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP029749_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029749_2

1962119-1962388

Orphan

Consensus_repeat	Method
TCTGGTTTNGCNTCTGGN	CRT

5 spacers

The CRISPR arrays of NZ_CP029749_2

>merge|NZ_CP029749|2|1962119-1962388|CRT
TCTGGTTTAGCCTCTGGCTTAACGTCTGGTTTAACTTCTGGCTTAGCCTCTGGTTTGGCCTCTGGCTTAACGTCTGGTTTAGCTTCTGGCTTAGCGTCTGGTTTAACTTCTGGCTTAACGTCTGGTTTAGCTTCTGGTTTAGCCTCTGGTTTGGCTTCTGGTTTGGCCTCTGGTTTGGCTTCTGGCTTAGCTTCTGGCTTAACGTCTGGCTTAACATCTGGTTTGGCTTCTGGTTTAACTTCTGGCTTAGCTTCTGGTTTGGCTACTTTT

>NZ_CP029749|2|2|1962119-1962388|CRT
TCTGGTTTAGCCTCTGGC	TTAACGTCTGGTTTAACTTCTGGCTTAGCCTCTGGTTTGGCCTCTGGCTTAACG
TCTGGTTTAGCTTCTGGC	TTAGCGTCTGGTTTAACTTCTGGCTTAACGTCTGGTTTAGCT
TCTGGTTTAGCCTCTGGT	TTGGCTTCTGGTTTGGCC
TCTGGTTTGGCTTCTGGC	TTAGCTTCTGGCTTAACGTCTGGCTTAACA
TCTGGTTTGGCTTCTGGT	TTAACTTCTGGCTTAGCT
TCTGGTTTGGCTACTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029749.1\|WP_000730416.1\|1953847_1955236_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP029749.1\|WP_142586350.1\|1964352_1965048_-\|YSIRK-type-signal-peptide-containing-protein	unknown	unknown	gnl\|CDD\|273479
NZ_CP029749.1\|WP_000010477.1\|1968133_1969018_+\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP029749.1\|WP_000077187.1\|1970852_1972064_-\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP029749.1\|WP_000903269.1\|1955328_1955937_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029749.1\|WP_000161343.1\|1953164_1953851_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP029749.1\|WP_001093374.1\|1948216_1952932_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173801
NZ_CP029749.1\|WP_000074727.1\|1958904_1960152_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP029749.1\|WP_001159688.1\|1972831_1974034_-\|NupC/NupG-family-nucleoside-CNT-transporter	unknown	unknown	gnl\|CDD\|224883
NZ_CP029749.1\|WP_000764812.1\|1965768_1968090_-\|penicillin-binding-protein	unknown	unknown	gnl\|CDD\|223815
NZ_CP029749.1\|WP_000453154.1\|1972130_1972802_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234784
NZ_CP029749.1\|WP_011058388.1\|1948128_1948254_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029749.1\|WP_000145177.1\|1956026_1958528_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NZ_CP029749.1\|WP_001182060.1\|1974054_1974834_-\|uridine-phosphorylase	unknown	unknown	gnl\|CDD\|350167
NZ_CP029749.1\|WP_000057521.1\|1965567_1965720_-\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|234783
NZ_CP029749.1\|WP_000410672.1\|1947201_1947894_-\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NZ_CP029749.1\|WP_000459240.1\|1969042_1970683_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226987
NZ_CP029749.1\|WP_000887149.1\|1961177_1961717_-\|transcription-termination/antitermination-protein-NusG	unknown	unknown	gnl\|CDD\|180161
NZ_CP029749.1\|WP_000953628.1\|1960194_1961040_-\|patatin-family-protein	unknown	unknown	gnl\|CDD\|132847
NZ_CP029749.1\|WP_000497678.1\|1965358_1965532_-\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|223762

Protein	Function_ID	Function_description	E-value
NZ_CP029749.1\|WP_000730416.1\|1953847_1955236_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.77969e-46
NZ_CP029749.1\|WP_142586350.1\|1964352_1965048_-\|YSIRK-type-signal-peptide-containing-protein	gnl\|CDD\|273479	TIGR01168, M_protein_serotype, Gram-positive signal peptide, YSIRK family. Many surface proteins found in Streptococcus, Staphylococcus, and related lineages share apparently homologous signal sequences. A motif resembling [YF]SIRKxxxGxxS[VIA] appears at the start of the transmembrane domain. The GxxS motif appears perfectly conserved, suggesting a specific function and not just homology. There is a strong correlation between proteins carrying this region at the N-terminus and those carrying the Gram-positive anchor domain with the LPXTG sortase processing site at the C-terminus.	0.00085974
NZ_CP029749.1\|WP_000010477.1\|1968133_1969018_+\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.5846e-84
NZ_CP029749.1\|WP_000077187.1\|1970852_1972064_-\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP029749.1\|WP_000459240.1\|1969042_1970683_-\|hypothetical-protein	gnl\|CDD\|226987	COG4640, COG4640, Predicted membrane protein [Function unknown].	3.13723e-08
NZ_CP029749.1\|WP_000161343.1\|1953164_1953851_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	8.44527e-63
NZ_CP029749.1\|WP_001093374.1\|1948216_1952932_+\|S8-family-serine-peptidase	gnl\|CDD\|173801	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases. Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	3.28365e-89
NZ_CP029749.1\|WP_000074727.1\|1958904_1960152_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.00017e-68
NZ_CP029749.1\|WP_001159688.1\|1972831_1974034_-\|NupC/NupG-family-nucleoside-CNT-transporter	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	3.49248e-155
NZ_CP029749.1\|WP_000764812.1\|1965768_1968090_-\|penicillin-binding-protein	gnl\|CDD\|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	0
NZ_CP029749.1\|WP_000453154.1\|1972130_1972802_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|234784	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional.	3.25832e-110
NZ_CP029749.1\|WP_000410672.1\|1947201_1947894_-\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	2.08703e-51
NZ_CP029749.1\|WP_000145177.1\|1956026_1958528_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_CP029749.1\|WP_001182060.1\|1974054_1974834_-\|uridine-phosphorylase	gnl\|CDD\|350167	cd17767, UP_EcUdp-like, uridine phosphorylases similar to Escherichia coli Udp and related phosphorylases. Uridine phosphorylase (UP) is specific for pyrimidines, and is involved in pyrimidine salvage and in the maintenance of uridine homeostasis. In addition to E. coli Udp, this subfamily includes Shewanella oneidensis MR-1 UP and Plasmodium falciparum purine nucleoside phosphorylase (PfPNP). PfPNP is an outlier in terms of genetic distance from the other families of PNPs. PfPNP is catalytically active for inosine and guanosine, and in addition, has a weak UP activity. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	4.65794e-137
NZ_CP029749.1\|WP_000057521.1\|1965567_1965720_-\|50S-ribosomal-protein-L33	gnl\|CDD\|234783	PRK00504, rpmG, 50S ribosomal protein L33; Validated.	2.53308e-18
NZ_CP029749.1\|WP_000887149.1\|1961177_1961717_-\|transcription-termination/antitermination-protein-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	3.00072e-83
NZ_CP029749.1\|WP_000953628.1\|1960194_1961040_-\|patatin-family-protein	gnl\|CDD\|132847	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	5.90358e-122
NZ_CP029749.1\|WP_000497678.1\|1965358_1965532_-\|preprotein-translocase-subunit-SecE	gnl\|CDD\|223762	COG0690, SecE, Preprotein translocase subunit SecE [Intracellular trafficking and secretion].	5.81702e-09

>NZ_CP029749.1|WP_000887149.1|1961177_1961717_-|transcription-termination/antitermination-protein-NusG
MLDSFDKGWFVLQTYSGYENKVKENLLQRAQTYNMLDNILRVEIPTQTVNVEKNGKTKEIEENRFPGYVLVEMVMTDEAWFVVRNTPNVTGFVGSHGNRSKPTPLLEEEIRSILISMGQTVDVFDTNIKEGDVVQIIDGAFIGQEGRVVEIENNKVKLMINMFGSETQAELELYQVAEL
>NZ_CP029749.1|WP_000953628.1|1960194_1961040_-|patatin-family-protein
MLSVGLVLEGGGMRGLYTAGVLDAFLDAGIKVDGIISVSAGALFGVNFVSRQRERALRYNKKYLSHPKYMSLRSWLRTGNFVNKDFTYYEVPMKLDVFDDEAFKKSSIDFYAVATEMTSGKPEYFKIDSVFEQMEILRASSALPVVSKMVVWQGKKYLDGGLSDSIPVDFARGLGFDKLIVVMTRPLNYQKKPSSGRLYKTLYRKYPNFVKTASNRYQQYNNSLEKVMSLEKTGDLFAIRPSKSLVIGRLEKNPDKLDSIYQLGMKDAKSGMPELNSYLMK
>NZ_CP029749.1|WP_000074727.1|1958904_1960152_+|MFS-transporter
MSPLNINKNNWRALIAAIVASGTDDLNIMFLAFSMSTIITDLHLSAAQAGWIGTITNLGMLVGGLIFGLLADRYNKFKVFKWTILIFSIATGLVFFTTNLSYLYIMRFIAGIGVGGEYGIAIAIMAGIVPANKMGRISSLNGIAGQVGSISSALLAGWLAPALGWRGLFLFGLLPIVLVLWMQFAIDDKDILDQYNTDADDEPLDISIKALFDTPVLATQSLALMVMTTVQIAGFFGMMNWLPTIIQTNLNVSVKNSSLWMIATILGMCLGMLVFGQLLDKFGPRLVYGCFLLSSAICVYLFQFATTMPSMIIGGAVVGFFVNGMFAGYGAMITRLYPHHIRSTANNLILNVGRAIGGFSSVIIGMILDVSNVSMVMLFLASLYIVSFLSMLSIKQLKHQKYHTNLTQLDVKPTD
>NZ_CP029749.1|WP_000145177.1|1956026_1958528_-|leucine--tRNA-ligase
MTFYNHKEIEPKWQAFWADNHTFKTGTDASKPKFYALDMFPYPSGAGLHVGHPEGYTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVEELGTAIANEEVLPDGTSERGGYPVVRKPMRQWMLKITAYAERLLEDLEEVDWPESIKDMQRNWIGKSTGANVTFKVKDTDKDFTVFTTRPDTLFGATYAVLAPEHALVDAITTADQAEAVAEYKRQASLKSDLARTDLAKEKTGVWTGAYAINPVNGKEIPVWIADYVLASYGTGAIMAVPAHDERDWEFAKQFKLDIIPVLEGGNVEEAAFTEDGLHINSDFLDGLDKASAIAKMVEWLEAEGVGNEKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSTAVPESELPLVLPVTKDIRPSGTGESPLANLTDWLEVTREDGVKGRRETNTMPQWAGSSWYYLRYIDPHNTEKLADEELLKQWLPVDIYVGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLFNQGMILGTSYRDSRGALVATDKVEKRDGSFFHVETGEELEQAPAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFLDRVYRLITTKEITKENSGALDKVYNETVKAVTEQVDQMKFNTAIAQLMVFVNAANKEDKLFSDYAKGFVQLIAPFAPHLGEELWQVLTASGESISYVPWPSYDESKLVENEIEIVVQIKGKVKAKLVVAKDLSREELQDLALANEKVQSEIAGKDIIKVIAVPNKLVNIVVK
>NZ_CP029749.1|WP_000903269.1|1955328_1955937_+|hypothetical-protein
MLHSKKIHSLSLIAVLSLATYTSLQPNHVTAEQSQKTSTVHMSQKTIEHKLKVADKEAAPLYAKIDHIQRHIEVKKAKDLKVIELYINKDINQLEKQNKRLLTKFYTSIDNQTWDSTSEVKKLIDKTNLSTNEKNRLKLYFEQRAYLETRLNDRYQKFDNSIENQNKELKILTSKIEKIYQKHGITKEVLKTYYAKKTVRAD
>NZ_CP029749.1|WP_000730416.1|1953847_1955236_+|HAMP-domain-containing-histidine-kinase
MKKKSLISNLILINSITLFLGFYLIYFSVNYVIKDYVHQMTRNSMQANFTILDSIYNNKKIPDENMVNQDSIFVWSYYAIFDQHYRMKYGTDNHKKESHDIIRYLTQKRLWQISKEKDGMFVTIKKKTYYVMTKDYSGILVDGSIKKVPKAQSQLFHVINFSDITYTQHLITKINHFLIVILVLTYIPMLFIMRKTFTGIRESIQSVQTYISSLWKNQGNHQSSQKEIVFSDFDPLLLESQEMANRIYQAEESQRNFFQNASHELRTPLMSIQGYTEGVQEGIIDAELAHSVILQESKKMKQLVDDIILLSKLDSNLSDQKDEFSLNELLNSIIAYFKPLANKQKISITYRPDEHEKLLKGNEELIQRAINNILSNALRYAVSHIEISYTNQKLTISNDGPAISKEDLPYIFDRFYKGHGGQTGIGLAMTKEIIKQHHGNIIAESDSTSTTFTIYFNCHKIA
>NZ_CP029749.1|WP_000161343.1|1953164_1953851_+|response-regulator-transcription-factor
MTKIIYFADDEKNIRDLVVPFLEHDGFTVRAFETGDLLLEAYKNQKPDLVILDIMMPGTNGLDVMKSIRQYDNVPIIMLTARDSDVDFITAFNLGTDDYFTKPFSPIKLSLHVKALFKRLDEKAIKNDTQYQFLDLTLDTEKRIALLSNEEMPLTKTEFDFLLVLIEKPETAFSRETLLNRIWGFDDIESRAVDDTIKRLRKKFKQYHSQVSIKTVWGYGFKLIKEDK
>NZ_CP029749.1|WP_001093374.1|1948216_1952932_+|S8-family-serine-peptidase
MNTKQRFSIRKYKLGAVSVLLGTLFFLGGITNVAADSVINKPSDIAVEQQVKDSPTSIANETPTNNTSSALASTAQDNLVTKANNNSPTETQPVAESHSQATETFSPAANQPVESTQEVSKTPLTKQNLAVKPTPAISKETPQNIDSNKIITVPKVWNTGYKGEGTVVAIIDSGLDTNHDALQLNDSTKAKYQNEQQMNAAKAKAGINYGKWYNNKVIFGHNYVDVNTELKEVKSTSHGMHVTSIATANPSKKDTNELIYGVAPEAQVMFMRVFSDEKRGTGPALYVKAIEDAVKLGADSINLSLGGANGSLVNADDRLIKALEMARLAGVSVVIAAGNDGTFGSGASKPSALYPDYGLIGSPSTAREAISVASYNNTTLVNKVFNIIGLENNKNLNNGLAAYADPKVSDKTFEVGKQYDYVFVGKGNDNDYKDKTLNGKIALIERGDITFTKKVVNAINHGAVGAIIFNNKAGEANLTMSLDPEASTIPAIFTQKEFGDVLAQKSYKIVFNNIKNKQANPNAGVLSDFSSWGLTADGQLKPDLSAPGGSIYAAINDNEYDMMSGTSMASPHVAGATALVKQYLLKEHPELKKGDIERTVKYLLMSTAKAHLNKDTGAYTSPRQQGAGIIDVAAAVQTGLYLTGGENNYGSVTLGNIKDKISFDVTVHNINKVAKDLHYTTYLNTDQVKDGFVTLAPQQLGTFTGKTIRIEPGQTKTITIDIDVSKYHDMLKKVMPNGYFLEGYVRFTDPVDGGEVLSIPYVGFKGEFQNLEVLEKSIYKLVANKEKGFYFQPKQTNEVPGSEDYTALMTTSSEPIYSTDGTSPIQLKALGSYKSIDGKWILQLDQKGQPHLAISPNDDQNQDAVAVKGVFLRNFNNLRAKVYRADDVNLQKPLWVSAPQAGDKNYYSGNTENPKSTFLYDTEWKGTTTDGIPLEDGKYKYVLTYYSDVPGSKPQQMVFDITLDRQAPTLTTATYDKDRRIFKARPAVEHGESDIFREQVFYLKKDKDGHYNSVLRQKGEDGILVEDNKVFIKQEKDGSFILPKEVNDFSHVYYTVEDYAGNLVSAKLEDLINIGNKNGLVNVKVFSPELNSNVDIDFSYSVKDDKGNVIKKQHHGKDLNLLKLPFGTYTFDLFLYDEERANLISPKSVTVTISEKDSLKDVLFKVNLLKKAALLVEFDKLLPKGATVQLVTKTNTVVDLPKATYSPTDYGKNIPVGDYRLNVTLPSGYSTLENLDDLLVSVKEGQVNLTKLTLINKAPLINALAEQTDIITQPVFYNAGTHLKNNYLANLEKAQTLIKNRVEQTSIDNAIAALRESRQALNGKETDTSLLAKAILAETEIKGNYQFVNASPLSQSTYINQVQLAKNLLQKPNVTQSEVDKALENLDIAKNQLNGHETDYSGLHHMIIKANVLKQTSSKYQNASQFAKENYNNLIKKAELLLSNRQATQAQVEELLNQIKATEQELDGRDRVSSAENYSQSLNDNDSLNTTPINPPNQPQALIFKKGMTKESEVAQKRVLGVTSQTDNQKVKTNKLPKTGESTPKITYTILLFSLSMLGLATIKLKSIKRE
>NZ_CP029749.1|WP_011058388.1|1948128_1948254_+|hypothetical-protein
MKIQKIVENFDFLCFNSFCNYYVTRKGDFYEHKTAFFNPEI
>NZ_CP029749.1|WP_000410672.1|1947201_1947894_-|AzlC-family-ABC-transporter-permease
MEKGFKDGVKDALPTALGYISIGLAFGIVASASDLSAIEVGLMSALVYGGSAQFAMCALLLAKADLMTITITVFLVNLRNMLMSLHATTIFKSAHLMNQLAIGTLVTDESYGVLLGEALHHKVVSPSWMHGNNVMSYLTWVISTIIGTLLGSTIPNPEMFGLDFALVAMFIGLFVFQLFGMLSDGKRLVVYVLASVGLSYFLLATFLSGALSVLLATVVGCSVGVVLDDK
>NZ_CP029749.1|WP_142586350.1|1964352_1965048_-|YSIRK-type-signal-peptide-containing-protein
MNNNEKKVKYFLRKTAYGLASMSAAFAVCSGIVHADTSSGISDSIPHKKQVNLGAVTLKNLISKYRGNDKAIAILLSRVDDFNRASQDTLPQLINSTEAEINNTLPQGRIIKQSIPVVRLKVERLGSGAIKAESINNIKAESINKIQGKSTNTIKAESINKIKVESINTIKAESINKIQAKPINTIKAESINTIKAESIHKIKPQSIKSTSATHVKVSDQELAKQSRRKIF
>NZ_CP029749.1|WP_000497678.1|1965358_1965532_-|preprotein-translocase-subunit-SecE
MFVKGIFQVLRDTTWPNRKQRWKDFISILEYTVFFTIVIYIFDKLLAAGVMDLINRF
>NZ_CP029749.1|WP_000057521.1|1965567_1965720_-|50S-ribosomal-protein-L33
MAQKKASLACTECGSRNYSIGVSSTPKPTRLEVNKFCKYCKKYTIHKETR
>NZ_CP029749.1|WP_000764812.1|1965768_1968090_-|penicillin-binding-protein
MKLFDKFIDLFRVDEDNDEMTRKNEQETREETSNLDGEEVYDIDDITRPSKSQYQRGIRHQKKNAKSRPEWLQKVDRYLPSPKNPIRRFWRRYRIGKLLFIALMAFILIFGSYLFYLSKTATVSDLQSALKTTTTIYDKNKEYAGKLSGQKGTYVELNAISDHLKNAVIATEDRTFYENNGVNFKRFFLAVATLGKFGGGSTITQQLAKNAYLSQDQTIKRKAREFFLALELTKKYSKAEILTMYLNNSYFGNGVWGVEDASRKYFGTSAANLTVDEAATLAGMLKGPEVYNPYYSVENATNRRDTVLAAMVDAGKLTKSQAKEAASIGMKNRLADTYAGKINDYRYPSYFDAVVNEAIDTYGISEKDIVNNGYKIYTALDQNYQSGMQKTFDDTSLFPVSDYDGQSAQGASVALDPKTGGVRGLVGRVQSTKDAQFRSFNYATQSKRSPASTIKPLVVYSPAIASGWSIDKELPNKVQDFHGYKPSNYGGIETESIPMYQALANSYNIPAVYTLDKLGINKAFTYGRKFGLNMSSANKELGVALGGSVTTNPLEMAQAYSTFANDGIMHRAHLITRIETANGKLVKQFTDKPKRVISRSVASKMTSMMLGTFSNGTAINANVYGYTMAGKTGTTETDFNPNLSGDQWVVGYTPDVVISQWVGFKKTDKHHYLTDSSAGTASNIFSTQASYILPYTKGSSFTHIENAYFQNGIGSVYNAQDASNTTNQESRSIINDLKDSASKAAQDISRAVEDSNFQEKVKDAWNSLKDYFR
>NZ_CP029749.1|WP_000010477.1|1968133_1969018_+|RluA-family-pseudouridine-synthase
MSFSLKIRNPYGEHTVKELLEDYFLIPRKIRHFLRVKKHVLINNEFINWQTVVQENDTITLIFDDEDYPTKKIPLGRAELIDCLYEDEHLIIVNKPEGMKTHGNQPNEIALLNHVSAYSGQTCYVVHRLDMETSGAVLFAKNPFILPLINQRLERKEIWREYWALVEGKFSPKHQVLRDKIGRNRHDRRKRIIDSKNGQHAMTIIDVLKYTQNSSLIKCRLETGRTHQIRIHLSHHGHPLIGDPLYNPSSNNERLMLHAHRLTLSHPLTCETISVEAPSSTFEKILNNYKKGVG
>NZ_CP029749.1|WP_000459240.1|1969042_1970683_-|hypothetical-protein
MFDFFKKKVVKVCLVIFGIVLVSLLSLGFFYFSKGQVLSRFVAARSRTSGQAFDNIKEYMVWSDTGESITNDEANYANFEPLSKSEARKLGQEIKEGNKNDSMYLKRVGSRLGIFPDYRIANKPMSLTLKTNVPKLDVLLNQKKVATSNSDHFSVTVERLPRTHYTASLEGTSDGKEIKLKKDYDGKNQTIDLSVAFKSFTVTSNLMDGNLYFGDNRIAKLKDGSYSVENYPVTDGSKAYIKKVFNDGEITSHKQKLISIADNQTIKLDVDGLLNEKEAGQKLITAFNQLILYVSTGQDPQTLGTVFEKGAENDFYKGLKESIKAKFVTDNRKASHFTIPNIVLNKMTQVGKESYQVNFAADYDFNYDKSTDPDKKTYGHIIQNLTGNFIMKKSGNSYLISNDGKKDITVAKETNKVKADPVSIFPENLVGSWKGEVEDGTVTMTFDKDGKVTQKKVYKDSKSKESNHSAKVTKLEDKGNGLYLYQYESGTDTTTFVTGGIGGLKVKYAYGIKIEGNKIIPVIWQTSSDGEFDYHKPLLSKPLTKQ
>NZ_CP029749.1|WP_000077187.1|1970852_1972064_-|phosphopentomutase
MSQFDRIHLVVLDSVGIGAAPDANDFVNAGVPDGASDTLGHISKTVGLAVPNMAKIGLGNIPRPQALKTVPAEENPSGYATKLQEVSLGKDTMTGHWEIMGLNITEPFDTFWNGFPEDIITKIEDFSGRKVIREANKPYSGTAVIDDFGPRQMETGELIIYTSADPVLQIAAHEDIIPLEELYRICEYARSITMERPALLGRIIARPYVGEPGNFTRTANRHDYAVSPFEDTVLNKLDQAGIDTYAVGKINDIFNGSGINHDMGHNKSNSHGIDTLIKTMGLSEFEKGFSFTNLVDFDALYGHRRDPHGYRDCLHEFDERLPEIISAMRDKDLLLITADHGNDPTYAGTDHTREYIPLLAYSPSFTGNGLIPVGHFADISATVADNFGVDTAMIGESFLQDLV
>NZ_CP029749.1|WP_000453154.1|1972130_1972802_-|deoxyribose-phosphate-aldolase
MEVKDILKTVDHTLLATTATWPEIQTILDDAMAYETASACIPASYVKKAAEYVSGKLAICTVIGFPNGYSTTAAKVFECQDAIKNGADEIDMVINLTDVKNGDFDTVEEEIRQIKAACQDHILKVIVETCQLTKEELIELCGVVTRSGADFIKTSTGFSTAGATFEDVEVMAKYVGEGVKIKAAGGISSLEDAEKFIALGASRLGTSRIIKIVKNQKVEEGTY
>NZ_CP029749.1|WP_001159688.1|1972831_1974034_-|NupC/NupG-family-nucleoside-CNT-transporter
MQFIYSIIGILLVLGIVYAISFNRKSVSLSLIGKALIVQFIIALILVRIPLGQQVVSVVSTGVTKVINCGQAGLNFVFGSLADSGAKTGFIFAIQTLGNIVFLSALVSLLYYVGILGFVVKWIGKGVGKIMKSSEVESFVAVANMFLGQTDSPILVSKYLGRMTDSEIMVVLVSGMGSMSVSILGGYIALGIPMEYLLIASTMVPIGSILIAKILLPQTEPVQKIDDIKMDNKGNNANVIDAIAEGASTGAQMAFSIGASLIAFVGLVSLINMMLSGLGIRLEQIFSYVFAPFGFLMGFDHKNILLEGNLLGSKLILNEFVSFQQLGHLIKSLDYRTALVATISLCGFANLSSLGICVSGIAVLCPEKRGTLARLVFRAMIGGIAVSMLSAFIVGIVTLF
>NZ_CP029749.1|WP_001182060.1|1974054_1974834_-|uridine-phosphorylase
MQNYSGEVGLQYHLQIRPGDVGRYVIMPGDPKRCAKIAEHFDNAVLVADSREYVTYTGTLNGEKVSVTSTGIGGPSASIAMEELKLCGADTFIRVGTCGGIDLDVKGGDIVIATGAIRMEGTSKEYAPIEFPAVADLEVTNALVNAAKKLGYTSHAGVVQCKDAFYGQHEPERMPVSYELLNKWEAWKRLGTKASEMESAALFVAASHLGVRCGSDFLVVGNQERNALGMDNPMAHDTEAAIQVAVEALRTLIENDKSQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP029749_2	2.3\|1962269\|18\|NZ_CP029749\|CRT	1962269-1962286	18	NZ_CP029749.1	1962113-1962130	1	0.944

1. spacer 2.3|1962269|18|NZ_CP029749|CRT matches to position: 1962113-1962130, mismatch: 1, identity: 0.944

ttggcttctggtttggcc	CRISPR spacer
ttggcttctggtttagcc	Protospacer
**************.***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP029749_1	1.8\|940949\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940949-940978	30	MK448708	Streptococcus phage Javan23, complete genome	17274-17303	1	0.967
NZ_CP029749_1	1.8\|940949\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940949-940978	30	MK448897	Streptococcus phage Javan28, complete genome	17274-17303	1	0.967
NZ_CP029749_1	1.9\|941015\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	941015-941044	30	MK448826	Streptococcus phage Javan645, complete genome	3085-3114	1	0.967
NZ_CP029749_1	1.9\|941015\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	941015-941044	30	MK449001	Streptococcus phage Javan640, complete genome	3085-3114	1	0.967
NZ_CP029749_1	1.6\|940817\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940817-940846	30	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	474277-474306	5	0.833
NZ_CP029749_1	1.4\|940685\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940685-940714	30	MN694049	Marine virus AFVG_250M506, complete genome	38456-38485	6	0.8
NZ_CP029749_1	1.2\|940553\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940553-940582	30	JQ309827	Enterococcus phage vB_Efae230P-4, complete genome	6331-6360	7	0.767
NZ_CP029749_1	1.2\|940553\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940553-940582	30	NC_049932	Enterococcus phage vB_EfaP_Ef6.2, complete genome	11683-11712	7	0.767
NZ_CP029749_1	1.2\|940553\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940553-940582	30	NC_049933	Enterococcus phage vB_EfaP_Ef6.3, complete genome	11815-11844	7	0.767
NZ_CP029749_1	1.4\|940685\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940685-940714	30	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	398084-398113	7	0.767
NZ_CP029749_1	1.4\|940685\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940685-940714	30	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	100403-100432	7	0.767
NZ_CP029749_1	1.4\|940685\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940685-940714	30	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	100444-100473	7	0.767
NZ_CP029749_1	1.4\|940685\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940685-940714	30	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	432012-432041	7	0.767
NZ_CP029749_1	1.5\|940751\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940751-940780	30	NZ_CP013072	Sphingobium indicum B90A plasmid pSRL2, complete sequence	93023-93052	7	0.767
NZ_CP029749_1	1.5\|940751\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940751-940780	30	NZ_CP005190	Sphingobium sp. MI1205 plasmid pMI1, complete sequence	70816-70845	7	0.767
NZ_CP029749_1	1.6\|940817\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940817-940846	30	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	473664-473693	7	0.767
NZ_CP029749_1	1.6\|940817\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940817-940846	30	NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	284952-284981	7	0.767
NZ_CP029749_1	1.6\|940817\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940817-940846	30	NZ_KJ776580	Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence	5593-5622	7	0.767
NZ_CP029749_1	1.6\|940817\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940817-940846	30	NZ_CP009650	Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence	227979-228008	7	0.767
NZ_CP029749_1	1.6\|940817\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940817-940846	30	MG592576	Vibrio phage 1.206.O._10N.222.51.B10, partial genome	27486-27515	7	0.767
NZ_CP029749_1	1.9\|941015\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	941015-941044	30	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	81747-81776	7	0.767
NZ_CP029749_1	1.9\|941015\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	941015-941044	30	NC_017401	Borreliella burgdorferi N40 plasmid N40_cp26, complete sequence	17658-17687	7	0.767
NZ_CP029749_2	2.4\|1962305\|30\|NZ_CP029749\|CRT	1962305-1962334	30	NC_048797	Bacillus phage vB_BmeM-Goe8, complete genome	33781-33810	7	0.767
NZ_CP029749_1	1.1\|940487\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940487-940516	30	NC_008738	Marinobacter hydrocarbonoclasticus VT8 plasmid pMAQU01, complete sequence	203171-203200	8	0.733
NZ_CP029749_1	1.1\|940487\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940487-940516	30	NZ_CP011383	Calothrix sp. 336/3 plasmid unnamed1	50908-50937	8	0.733
NZ_CP029749_1	1.3\|940619\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940619-940648	30	NZ_LR214989	Mycoplasma cynos strain NCTC10142 plasmid 16	833-862	8	0.733
NZ_CP029749_1	1.5\|940751\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940751-940780	30	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	307848-307877	8	0.733
NZ_CP029749_1	1.6\|940817\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940817-940846	30	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	655420-655449	8	0.733
NZ_CP029749_1	1.6\|940817\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940817-940846	30	NZ_CP020744	Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence	311665-311694	8	0.733
NZ_CP029749_1	1.6\|940817\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940817-940846	30	NZ_CP045607	Bacillus cereus strain SB1 plasmid p1, complete sequence	493398-493427	8	0.733
NZ_CP029749_1	1.8\|940949\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940949-940978	30	MT774410	CrAssphage cr272_1, complete genome	40926-40955	8	0.733
NZ_CP029749_1	1.8\|940949\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940949-940978	30	MT774411	CrAssphage cr273_1, complete genome	91946-91975	8	0.733
NZ_CP029749_1	1.8\|940949\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940949-940978	30	NC_031274	Pseudomonas phage O4, complete genome	9990-10019	8	0.733
NZ_CP029749_1	1.8\|940949\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940949-940978	30	MF788075	Pseudomonas phage IME180, complete genome	9501-9530	8	0.733
NZ_CP029749_1	1.8\|940949\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940949-940978	30	NZ_CP045419	Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence	428420-428449	8	0.733
NZ_CP029749_1	1.4\|940685\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940685-940714	30	MK448388	Streptococcus satellite phage Javan259, complete genome	8027-8056	9	0.7
NZ_CP029749_1	1.4\|940685\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940685-940714	30	MN694159	Marine virus AFVG_250M1044, complete genome	30373-30402	9	0.7
NZ_CP029749_1	1.4\|940685\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940685-940714	30	KT997847	Uncultured phage_Deep1-GF2-KM23-C739 genomic sequence	31491-31520	9	0.7
NZ_CP029749_1	1.8\|940949\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940949-940978	30	KU160641	Arthrobacter phage CaptnMurica, complete genome	18771-18800	9	0.7
NZ_CP029749_1	1.8\|940949\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940949-940978	30	MH825711	Arthrobacter phage Tenno, complete genome	18765-18794	9	0.7
NZ_CP029749_1	1.4\|940685\|30\|NZ_CP029749\|PILER-CR,CRISPRCasFinder,CRT	940685-940714	30	NC_010630	Nostoc punctiforme PCC 73102 plasmid pNPUN03, complete sequence	13737-13766	10	0.667

1. spacer 1.8|940949|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to MK448708 (Streptococcus phage Javan23, complete genome) position: , mismatch: 1, identity: 0.967

tcaaacaacattggtgatcttattgcggta	CRISPR spacer
tcaaataacattggtgatcttattgcggta	Protospacer
*****.************************

2. spacer 1.8|940949|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to MK448897 (Streptococcus phage Javan28, complete genome) position: , mismatch: 1, identity: 0.967

tcaaacaacattggtgatcttattgcggta	CRISPR spacer
tcaaataacattggtgatcttattgcggta	Protospacer
*****.************************

3. spacer 1.9|941015|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to MK448826 (Streptococcus phage Javan645, complete genome) position: , mismatch: 1, identity: 0.967

ttatttaagacgtgatttaatgttaaaact	CRISPR spacer
ttatttaagacgtgatttaatattaaaact	Protospacer
*********************.********

4. spacer 1.9|941015|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to MK449001 (Streptococcus phage Javan640, complete genome) position: , mismatch: 1, identity: 0.967

ttatttaagacgtgatttaatgttaaaact	CRISPR spacer
ttatttaagacgtgatttaatattaaaact	Protospacer
*********************.********

5. spacer 1.6|940817|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

aaatgttaatttcatatctacatcttgttc	CRISPR spacer
aaatgttaatttcatatcaacatcttagct	Protospacer
****************** *******. ..

6. spacer 1.4|940685|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to MN694049 (Marine virus AFVG_250M506, complete genome) position: , mismatch: 6, identity: 0.8

tagtaataaataatwttatggcttttattt	CRISPR spacer
agggaataaataatataatggcttttatgt	Protospacer
 .* ********** * *********** *

7. spacer 1.2|940553|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to JQ309827 (Enterococcus phage vB_Efae230P-4, complete genome) position: , mismatch: 7, identity: 0.767

gctaccgtctgcctattcctcatgaggctc	CRISPR spacer
cattacgtctgcctattccttatgaggatt	Protospacer
  *  ***************.****** *.

8. spacer 1.2|940553|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NC_049932 (Enterococcus phage vB_EfaP_Ef6.2, complete genome) position: , mismatch: 7, identity: 0.767

gctaccgtctgcctattcctcatgaggctc	CRISPR spacer
cattacgtctgcctattccttatgaggatt	Protospacer
  *  ***************.****** *.

9. spacer 1.2|940553|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NC_049933 (Enterococcus phage vB_EfaP_Ef6.3, complete genome) position: , mismatch: 7, identity: 0.767

gctaccgtctgcctattcctcatgaggctc	CRISPR spacer
cattacgtctgcctattccttatgaggatt	Protospacer
  *  ***************.****** *.

10. spacer 1.4|940685|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 7, identity: 0.767

tagtaataaataatwttatggcttttattt	CRISPR spacer
aagataataatattgttatggcttttattt	Protospacer
 **  *  **** * ***************

11. spacer 1.4|940685|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 7, identity: 0.767

tagtaataaataatwttatggcttttattt	CRISPR spacer
aagataataatattgttatggcttttattt	Protospacer
 **  *  **** * ***************

12. spacer 1.4|940685|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 7, identity: 0.767

tagtaataaataatwttatggcttttattt	CRISPR spacer
aagataataatattgttatggcttttattt	Protospacer
 **  *  **** * ***************

13. spacer 1.4|940685|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 7, identity: 0.767

tagtaataaataatwttatggcttttattt	CRISPR spacer
aagataataatattgttatggcttttattt	Protospacer
 **  *  **** * ***************

14. spacer 1.5|940751|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013072 (Sphingobium indicum B90A plasmid pSRL2, complete sequence) position: , mismatch: 7, identity: 0.767

ggatgatttcgattatgcggcggtggttga	CRISPR spacer
cgacgatttcgattatgcggcggcattcaa	Protospacer
 **.*******************.. *..*

15. spacer 1.5|940751|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP005190 (Sphingobium sp. MI1205 plasmid pMI1, complete sequence) position: , mismatch: 7, identity: 0.767

ggatgatttcgattatgcggcggtggttga	CRISPR spacer
cgacgatttcgattatgcggcggccttcaa	Protospacer
 **.*******************.  *..*

16. spacer 1.6|940817|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

aaatgttaatttcatatctacatcttgttc	CRISPR spacer
aaatgttaatttcatatcaacagttttcat	Protospacer
****************** *** .** . .

17. spacer 1.6|940817|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007625 (Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

aaatgttaatttcatatctacatcttgttc	CRISPR spacer
aaatgttaatttcatatcaacagtaactta	Protospacer
****************** *** .   **

18. spacer 1.6|940817|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ776580 (Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence) position: , mismatch: 7, identity: 0.767

aaatgttaatttcatatctacatcttgttc	CRISPR spacer
cactgttaatttcatatcttcattttgaat	Protospacer
 * **************** ***.***  .

19. spacer 1.6|940817|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009650 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_1, complete sequence) position: , mismatch: 7, identity: 0.767

aaatgttaatttcatatctacatcttgttc	CRISPR spacer
aaatgttaatttcatatcaacagtaactta	Protospacer
****************** *** .   **

20. spacer 1.6|940817|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to MG592576 (Vibrio phage 1.206.O._10N.222.51.B10, partial genome) position: , mismatch: 7, identity: 0.767

aaatgttaatttcatatctacatcttgttc	CRISPR spacer
tcttgttaatttaatatctacaccttaatc	Protospacer
   ********* *********.***. **

21. spacer 1.9|941015|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 7, identity: 0.767

ttatttaagacgtgatttaatgttaaaact	CRISPR spacer
ctatttaacaagtgatttaatgttatacaa	Protospacer
.******* * ************** *

22. spacer 1.9|941015|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NC_017401 (Borreliella burgdorferi N40 plasmid N40_cp26, complete sequence) position: , mismatch: 7, identity: 0.767

ttatttaagacgtgatttaatgttaaaact	CRISPR spacer
ctttataagaagtgatttaaggttaaaatc	Protospacer
.* * ***** ********* *******..

23. spacer 2.4|1962305|30|NZ_CP029749|CRT matches to NC_048797 (Bacillus phage vB_BmeM-Goe8, complete genome) position: , mismatch: 7, identity: 0.767

ttagcttctggcttaacgtctggcttaaca	CRISPR spacer
tctgcttctggcttaacctctggctctgct	Protospacer
*. ************** *******. .*

24. spacer 1.1|940487|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NC_008738 (Marinobacter hydrocarbonoclasticus VT8 plasmid pMAQU01, complete sequence) position: , mismatch: 8, identity: 0.733

aactctgtctctttaagttgtgattgaaga	CRISPR spacer
cagcctgtctcttgaagtggtgattgagtg	Protospacer
 * .********* **** ********. .

25. spacer 1.1|940487|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011383 (Calothrix sp. 336/3 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

aactctgtctctttaagttgtgattgaaga	CRISPR spacer
tagtctgtctctttgagtagtgattggctc	Protospacer
 * ***********.*** *******.

26. spacer 1.3|940619|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214989 (Mycoplasma cynos strain NCTC10142 plasmid 16) position: , mismatch: 8, identity: 0.733

aaaatgtgcattcatttacttctcttgtgt	CRISPR spacer
aaaatgtgcattaatttacttaataatttt	Protospacer
************ ********  .   * *

27. spacer 1.5|940751|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 8, identity: 0.733

ggatgatttcgattatgcggcggtggttga	CRISPR spacer
agaacggatcgtttatgcggcggtggttgg	Protospacer
.**  .  *** *****************.

28. spacer 1.6|940817|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.733

aaatgttaatttcatatctacatcttgttc	CRISPR spacer
aaatgttaattcaatatctacatgaatgta	Protospacer
***********. **********     *

29. spacer 1.6|940817|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aaatgttaatttcatatctacatcttgttc	CRISPR spacer
aaatgttgatttcatatcaacatttaacag	Protospacer
*******.********** ****.* ..

30. spacer 1.6|940817|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

aaatgttaatttcatatctacatcttgttc	CRISPR spacer
agatgttaatttcatatcaacatttaagat	Protospacer
*.**************** ****.* .  .

31. spacer 1.8|940949|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to MT774410 (CrAssphage cr272_1, complete genome) position: , mismatch: 8, identity: 0.733

tcaaacaacattggtgatcttattgcggta	CRISPR spacer
tcaaagaacattgctgatcttattaacaag	Protospacer
***** ******* **********.  . .

32. spacer 1.8|940949|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to MT774411 (CrAssphage cr273_1, complete genome) position: , mismatch: 8, identity: 0.733

tcaaacaacattggtgatcttattgcggta	CRISPR spacer
tcaaagaacattgctgatcttattaacaag	Protospacer
***** ******* **********.  . .

33. spacer 1.8|940949|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NC_031274 (Pseudomonas phage O4, complete genome) position: , mismatch: 8, identity: 0.733

tcaaacaacattggtgatcttattgcggta	CRISPR spacer
ggtaacaacagtggtggtcttattgccaca	Protospacer
   ******* *****.********* ..*

34. spacer 1.8|940949|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to MF788075 (Pseudomonas phage IME180, complete genome) position: , mismatch: 8, identity: 0.733

tcaaacaacattggtgatcttattgcggta	CRISPR spacer
ggtaacaacagtggtggtcttattgccaca	Protospacer
   ******* *****.********* ..*

35. spacer 1.8|940949|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045419 (Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence) position: , mismatch: 8, identity: 0.733

tcaaacaacattggtgatcttattgcggta	CRISPR spacer
ataaataacattgttgatcttattgtaatc	Protospacer
 .***.******* ***********...*

36. spacer 1.4|940685|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to MK448388 (Streptococcus satellite phage Javan259, complete genome) position: , mismatch: 9, identity: 0.7

tagtaataaataatwttatggcttttattt	CRISPR spacer
aagaaataaataattttatggctaccgcta	Protospacer
 ** ********** ******** ....*

37. spacer 1.4|940685|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to MN694159 (Marine virus AFVG_250M1044, complete genome) position: , mismatch: 9, identity: 0.7

tagtaataaataatwttatggcttttattt	CRISPR spacer
aaattgaaaataatttaatggcttttatga	Protospacer
 *.* . ******* * ***********

38. spacer 1.4|940685|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to KT997847 (Uncultured phage_Deep1-GF2-KM23-C739 genomic sequence) position: , mismatch: 9, identity: 0.7

tagtaataaataatwttatggcttttattt	CRISPR spacer
aaattgaaaataatttaatggcttttatga	Protospacer
 *.* . ******* * ***********

39. spacer 1.8|940949|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to KU160641 (Arthrobacter phage CaptnMurica, complete genome) position: , mismatch: 9, identity: 0.7

tcaaacaacattggtgatcttattgcggta	CRISPR spacer
attaacaacaatggtgatcttattctcaca	Protospacer
 . ******* ************* . ..*

40. spacer 1.8|940949|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to MH825711 (Arthrobacter phage Tenno, complete genome) position: , mismatch: 9, identity: 0.7

tcaaacaacattggtgatcttattgcggta	CRISPR spacer
attaacaacaatggtgatcttattctcaca	Protospacer
 . ******* ************* . ..*

41. spacer 1.4|940685|30|NZ_CP029749|PILER-CR,CRISPRCasFinder,CRT matches to NC_010630 (Nostoc punctiforme PCC 73102 plasmid pNPUN03, complete sequence) position: , mismatch: 10, identity: 0.667

tagtaataaataatwttatggcttttattt	CRISPR spacer
caaaaataaataattttagggctttggaac	Protospacer
.*. ********** *** ****** .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

36855 : 48920

Synechococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001042250.1\|36855_40581_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.9e-38	25.9
WP_000220676.1\|40814_42269_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.7e-54	32.7
WP_001291328.1\|42296_43319_+	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	1.1e-63	42.7
WP_000685109.1\|43486_44035_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.4e-25	35.6
WP_000780022.1\|44057_44810_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000166549.1\|44829_46377_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	3.9e-78	49.2
WP_001045908.1\|46569_47469_+	peptidoglycan DD-metalloendopeptidase family protein	A0A221J6U0	Arthrobacter_phage	4.1e-19	45.9
WP_000783419.1\|47615_48920_+	LysM peptidoglycan-binding domain-containing protein	A0A2D1GNZ3	Streptomyces_phage	3.7e-05	40.5

DBSCAN-SWA_2

589199 : 657086

Streptococcus_phage(100.0%)

terminase,capsid,holin,head,integrase,protease,tail

attL 591099:591115|attR 637128:637144

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000902645.1\|589199_590555_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	D0R096	Streptococcus_phage	2.3e-191	73.4
WP_001261523.1\|591076_591595_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA
591099:591115	attL	NA	NA	NA	NA
WP_001291561.1\|591786_593004_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
WP_000814511.1\|593085_593289_-	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
WP_001845478.1\|593272_593524_+	hypothetical protein	NA	NA	NA	NA
WP_000857133.1\|593749_593980_-	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
WP_000804885.1\|593976_594399_-	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
WP_013670292.1\|594627_594699_-	hypothetical protein	NA	NA	NA	NA
WP_001227347.1\|594903_595257_+	helix-turn-helix transcriptional regulator	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
WP_011058338.1\|595316_595502_-	conjugal transfer protein	D0R0F6	Streptococcus_phage	3.9e-17	67.9
WP_000691736.1\|595602_597522_-	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	99.5
WP_012386611.1\|597537_597624_-	tetracycline resistance determinant leader peptide	NA	NA	NA	NA
WP_001224318.1\|597898_598831_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	3.1e-171	99.4
WP_000769868.1\|598827_599829_-	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
WP_000804748.1\|599825_602003_-	membrane protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	100.0
WP_000331160.1\|602005_604453_-	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
WP_000506270.1\|604436_604943_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
WP_000342539.1\|604917_605415_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
WP_001009056.1\|605531_605753_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
WP_000398284.1\|605795_607001_-	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
WP_000879507.1\|607023_607176_-	hypothetical protein	NA	NA	NA	NA
WP_000813488.1\|607178_608564_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
WP_000985015.1\|608592_608979_-	YdcP family protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
WP_000420682.1\|608994_609309_-	YdcP family protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
WP_001825268.1\|609331_609451_-	hypothetical protein	NA	NA	NA	NA
WP_000445922.1\|609935_610466_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000459852.1\|616507_618376_+	XRE family transcriptional regulator	E4ZFJ9	Streptococcus_phage	2.0e-302	80.9
WP_001122250.1\|618784_619354_+	hypothetical protein	A0A1B0RXB3	Streptococcus_phage	1.1e-86	81.0
WP_000905644.1\|619392_621348_-	DNA polymerase	D0R0B0	Streptococcus_phage	0.0e+00	83.6
WP_000208946.1\|621578_622142_-	DUF2815 family protein	A0A1B0RXA9	Streptococcus_phage	3.3e-91	93.4
WP_001868547.1\|622146_623268_-	DUF2800 domain-containing protein	A0A1X9I6D8	Streptococcus_phage	8.0e-198	88.5
WP_000041407.1\|623260_623584_-	hypothetical protein	A0A1B0RXB7	Streptococcus_phage	2.0e-32	71.2
WP_001160917.1\|623980_626260_+	hypothetical protein	M1NSF0	Streptococcus_phage	0.0e+00	80.7
WP_001208304.1\|626610_626892_+	VRR-NUC domain-containing protein	M1PFY8	Streptococcus_phage	5.5e-39	82.8
WP_000777509.1\|626872_628249_+	DEAD/DEAH box helicase	A0A1X9I6B0	Streptococcus_phage	5.3e-228	84.5
WP_000373917.1\|628241_628751_+	hypothetical protein	Q6DMV6	Streptococcus_phage	1.4e-45	54.5
WP_000166942.1\|628930_629113_+	hypothetical protein	A0A1B0RXC3	Streptococcus_phage	2.0e-21	88.3
WP_000578149.1\|629160_630198_+	methionine adenosyltransferase	E4ZFL0	Streptococcus_phage	8.8e-167	84.3
WP_001138025.1\|630199_630565_+	HNH endonuclease	E4ZFL2	Streptococcus_phage	3.9e-61	86.7
WP_000999418.1\|630853_631309_+	hypothetical protein	A0A1B0RXC6	Streptococcus_phage	5.4e-44	51.0
WP_000211619.1\|631280_632537_+	DNA modification methylase	E4ZFL4	Streptococcus_phage	3.7e-220	88.7
WP_000176353.1\|632533_633787_+	DNA (cytosine-5-)-methyltransferase	M1NSK8	Streptococcus_phage	3.6e-231	93.5
WP_000342208.1\|634129_634579_+	DUF4314 domain-containing protein	E4ZFL7	Streptococcus_phage	1.8e-15	63.6
WP_000290862.1\|634630_635104_+\|terminase	phage terminase small subunit P27 family	A0A1X9I6K0	Streptococcus_phage	2.3e-85	96.8
WP_000220988.1\|635100_636693_+\|terminase	terminase large subunit	A0A1B0RXJ8	Streptococcus_phage	2.5e-306	95.5
WP_001166641.1\|636763_637021_+	type II toxin-antitoxin system Phd/YefM family antitoxin	E4ZFM1	Streptococcus_phage	1.2e-35	95.3
WP_001221830.1\|637017_637389_+	type II toxin-antitoxin system death-on-curing family toxin	A0A1X9I6C0	Streptococcus_phage	1.2e-57	89.4
637128:637144	attR	NA	NA	NA	NA
WP_000149740.1\|637414_637741_+	hypothetical protein	NA	NA	NA	NA
WP_001225239.1\|639089_639788_+\|protease	Clp protease ClpP	A0A1B0RXE1	Streptococcus_phage	3.8e-105	83.2
WP_000040499.1\|639801_641010_+\|capsid	phage major capsid protein	M1Q1R5	Streptococcus_phage	4.0e-211	90.8
WP_000988604.1\|641006_641264_+\|head,tail	phage gp6-like head-tail connector protein	D0R0D7	Streptococcus_phage	9.5e-30	77.6
WP_000684963.1\|641263_641602_+\|head,tail	head-tail adaptor protein	A0A1B0RXE4	Streptococcus_phage	4.7e-37	68.8
WP_000161246.1\|641594_641963_+	hypothetical protein	Q6DMT7	Streptococcus_phage	1.0e-32	62.1
WP_001209972.1\|641971_642298_+	hypothetical protein	M1Q1Z4	Streptococcus_phage	2.4e-38	68.5
WP_000818569.1\|642300_642870_+	hypothetical protein	A0A1B0RXE2	Streptococcus_phage	3.6e-98	95.2
WP_001249617.1\|642881_643301_+	hypothetical protein	A0A1X9I691	Streptococcus_phage	9.7e-56	76.3
WP_000918338.1\|643595_646715_+	hypothetical protein	Q6DMT2	Streptococcus_phage	5.8e-254	77.1
WP_000589859.1\|646711_647437_+	hypothetical protein	M1Q107	Streptococcus_phage	1.6e-82	61.1
WP_142586332.1\|647436_650352_+	carbamoylsarcosine amidase	Q6DMT0	Streptococcus_phage	0.0e+00	64.1
WP_000796413.1\|650364_652221_+	hypothetical protein	Q6DMS9	Streptococcus_phage	1.0e-258	73.1
WP_000661349.1\|652238_652637_+\|holin	phage holin family protein	D0R0E9	Streptococcus_phage	5.1e-38	60.8
WP_000143481.1\|652638_654045_+	LysM peptidoglycan-binding domain-containing protein	A0A1B0RXL4	Streptococcus_phage	2.4e-106	63.1
WP_000123549.1\|654180_654288_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_000290969.1\|654595_655837_+	recombinase family protein	A0A1X9I6J1	Streptococcus_phage	7.8e-170	69.2
WP_079255576.1\|655781_657086_+	recombinase family protein	E4ZFN9	Streptococcus_phage	1.1e-198	80.0

DBSCAN-SWA_3

1552526 : 1563260

Streptococcus_phage(84.62%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000767485.1\|1552526_1553354_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	5.1e-125	78.4
WP_000287943.1\|1553394_1553751_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	5.2e-42	72.6
WP_000966772.1\|1553752_1554229_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	7.1e-39	50.9
WP_000232152.1\|1554285_1555467_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.1e-168	75.3
WP_001167085.1\|1555529_1556078_-	acetyltransferase	M1PSC3	Streptococcus_phage	1.1e-54	58.4
WP_000158399.1\|1556145_1557237_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	1.7e-165	78.0
WP_000603275.1\|1557369_1558005_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001868293.1\|1558048_1558153_-	hypothetical protein	NA	NA	NA	NA
WP_079254703.1\|1558137_1558299_+	hypothetical protein	NA	NA	NA	NA
WP_001868299.1\|1558274_1559138_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.7e-110	70.7
WP_000358198.1\|1559143_1559470_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.2e-30	61.1
WP_000364568.1\|1559500_1560364_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.5e-74	50.0
WP_000715594.1\|1560383_1561019_-	dTMP kinase	M1PSC7	Streptococcus_phage	1.4e-66	60.1
WP_001144246.1\|1561107_1561767_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	4.7e-65	56.5
WP_000178141.1\|1561785_1562496_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-17	27.7
WP_001185989.1\|1562495_1563260_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.9e-15	24.8

DBSCAN-SWA_4

2040132 : 2049625

Streptococcus_phage(81.82%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000038826.1\|2040132_2040510_-	DUF1492 domain-containing protein	Q7Y4J3	Streptococcus_phage	3.2e-10	37.9
WP_000891151.1\|2040643_2041132_-	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	1.0e-48	58.6
WP_001258765.1\|2041204_2041762_-	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	2.4e-30	59.8
WP_000694573.1\|2041919_2042093_-	hypothetical protein	A0A1X9I5U0	Streptococcus_phage	4.3e-10	56.1
WP_001069293.1\|2042089_2042347_-	hypothetical protein	NA	NA	NA	NA
WP_000656430.1\|2042639_2044034_-	hypothetical protein	W8CQP1	Croceibacter_phage	3.7e-43	33.7
WP_001029296.1\|2044045_2044903_-	hypothetical protein	A0A1X9I6L2	Streptococcus_phage	3.0e-120	72.9
WP_001100460.1\|2044903_2045176_-	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	1.8e-18	56.8
WP_001157003.1\|2045517_2045709_-	hypothetical protein	NA	NA	NA	NA
WP_001256559.1\|2045711_2045933_-	hypothetical protein	NA	NA	NA	NA
WP_000877499.1\|2045929_2046262_-	hypothetical protein	NA	NA	NA	NA
WP_001259478.1\|2046338_2046845_-	hypothetical protein	A0A1X9I5V7	Streptococcus_phage	4.5e-07	35.4
WP_000130289.1\|2046933_2047107_-	hypothetical protein	NA	NA	NA	NA
WP_001021397.1\|2047205_2047844_-	Bro-N domain-containing protein	NA	NA	NA	NA
WP_001258609.1\|2048079_2048682_-	phage repressor protein	A0A1W6JPC3	Staphylococcus_phage	6.7e-42	46.7
WP_000909285.1\|2048697_2048883_-	hypothetical protein	A0A1X9I5U7	Streptococcus_phage	6.2e-07	54.8
WP_001080836.1\|2049037_2049625_+	helix-turn-helix domain-containing protein	A0A1X9I5U6	Streptococcus_phage	4.0e-15	37.5

Anti-CRISPR protein detection

Acr_ID: NZ_CP029749.1|WP_000384270.1|234402_234729_+|replication-initiator-protein-A

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP029749.1|WP_000384270.1|234402_234729_+|replication-initiator-protein-A

234402_234729_+

108 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|63	0.9444444444444444	1	1.0

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP029749

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information