CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP041359	Escherichia coli strain U1 chromosome, complete genome	3 crisprs	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,csa3,RT,WYL,DEDDh,c2c9_V-U4,DinG,cas14j	0	19	13	0
NZ_CP041358	Escherichia coli strain U1 plasmid unnamed1, complete sequence	0 crisprs	DEDDh,RT	0	0	11	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041359_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041359_1

141838-142415

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGACGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGNCGCGGGGAACAC	CRT

9 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP041359_1

>merge|NZ_CP041359|1|141838-142415|PILER-CR,CRISPRCasFinder,CRT
CGGTTTATCCCCGCTGACGCGGGGAACACGGCTTTAACCACACGAGCAAGTCCTTCGCTGGCGGTTTATCCCCGCTGGCGCGGGGAACACTCGCACCGCGTTAATCCGGCAGAAAAACAACACGGTTTATCCCCGCTGGCGCGGGGAACACCCGACAATCTCCGCCTCCAGTCGGTCGACCTGCGGTTTATCCCCGCTGGCGCGGGGAACACTGTGCCCGACTGCGTGCCGCGTCGAGCGCCTGCGGTTTATCCCCGCTGGCGCGGGGAACACTTCGCCGCCATCATCCTGTGGTGCCAGTTGACCGGTTTATCCCCGCTGACGCGGGGAACACGCGCCTCGGTTGTTTAGCCATGCTCAGCCCCACGGTTTATCCCCGCTGACGCGGGGAACACCTTTCCACCCAGGCACTGATACTCCACATAAACGGTTTATCCCCGCTGACGCGGGGAACACGATCGCCGGGCGCGGTTACCCGCTGCGAAAATCGGTTTATCCCCGCTGACGCGGGGAACACCTCACGCGAGGCATCGATCGTGATCTGATTGTCGGTTTATCCCCGCTGACGCGGGGAACAC

>NZ_CP041359|1|1|141838-142415|PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	GGCTTTAACCACACGAGCAAGTCCTTCGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGCACCGCGTTAATCCGGCAGAAAAACAACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGACAATCTCCGCCTCCAGTCGGTCGACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTGCCCGACTGCGTGCCGCGTCGAGCGCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGCCGCCATCATCCTGTGGTGCCAGTTGAC
CGGTTTATCCCCGCTGACGCGGGGAACAC	GCGCCTCGGTTGTTTAGCCATGCTCAGCCCCA
CGGTTTATCCCCGCTGACGCGGGGAACAC	CTTTCCACCCAGGCACTGATACTCCACATAAA
CGGTTTATCCCCGCTGACGCGGGGAACAC	GATCGCCGGGCGCGGTTACCCGCTGCGAAAAT
CGGTTTATCCCCGCTGACGCGGGGAACAC	CTCACGCGAGGCATCGATCGTGATCTGATTGT
CGGTTTATCCCCGCTGACGCGGGGAACAC

>NZ_CP041359|1|1|141838-142415|CRISPRCasFinder
CGGTTTATCCCCGCTGACGCGGGGAACAC	GGCTTTAACCACACGAGCAAGTCCTTCGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGCACCGCGTTAATCCGGCAGAAAAACAACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGACAATCTCCGCCTCCAGTCGGTCGACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTGCCCGACTGCGTGCCGCGTCGAGCGCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGCCGCCATCATCCTGTGGTGCCAGTTGAC
CGGTTTATCCCCGCTGACGCGGGGAACAC	GCGCCTCGGTTGTTTAGCCATGCTCAGCCCCA
CGGTTTATCCCCGCTGACGCGGGGAACAC	CTTTCCACCCAGGCACTGATACTCCACATAAA
CGGTTTATCCCCGCTGACGCGGGGAACAC	GATCGCCGGGCGCGGTTACCCGCTGCGAAAAT
CGGTTTATCCCCGCTGACGCGGGGAACAC	CTCACGCGAGGCATCGATCGTGATCTGATTGT
CGGTTTATCCCCGCTGACGCGGGGAACAC

>NZ_CP041359|1|1|141838-142415|CRT
CGGTTTATCCCCGCTGACGCGGGGAACAC	GGCTTTAACCACACGAGCAAGTCCTTCGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGCACCGCGTTAATCCGGCAGAAAAACAACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGACAATCTCCGCCTCCAGTCGGTCGACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTGCCCGACTGCGTGCCGCGTCGAGCGCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGCCGCCATCATCCTGTGGTGCCAGTTGAC
CGGTTTATCCCCGCTGACGCGGGGAACAC	GCGCCTCGGTTGTTTAGCCATGCTCAGCCCCA
CGGTTTATCCCCGCTGACGCGGGGAACAC	CTTTCCACCCAGGCACTGATACTCCACATAAA
CGGTTTATCCCCGCTGACGCGGGGAACAC	GATCGCCGGGCGCGGTTACCCGCTGCGAAAAT
CGGTTTATCCCCGCTGACGCGGGGAACAC	CTCACGCGAGGCATCGATCGTGATCTGATTGT
CGGTTTATCCCCGCTGACGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041359.1\|WP_001551555.1\|148373_151073_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP041359.1\|WP_000956458.1\|151267_151420_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP041359.1\|WP_000206445.1\|145110_146166_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP041359.1\|WP_001551549.1\|137151_137475_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP041359.1\|WP_001521160.1\|151684_152419_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP041359.1\|WP_001295182.1\|133650_134412_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP041359.1\|WP_000246131.1\|135917_136628_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP041359.1\|WP_000029331.1\|146180_146717_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP041359.1\|WP_001551554.1\|146713_148276_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP041359.1\|WP_001551553.1\|144353_145100_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP041359.1\|WP_000517476.1\|136646_136958_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP041359.1\|WP_001219242.1\|135438_135918_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP041359.1\|WP_000568924.1\|134392_135442_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP041359.1\|WP_001551550.1\|138129_139557_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP041359.1\|WP_000063172.1\|142511_142805_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP041359.1\|WP_000281438.1\|143721_144372_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP041359.1\|WP_000144858.1\|142801_143725_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP041359.1\|WP_001173673.1\|137524_138130_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP041359.1\|WP_000372108.1\|139558_140467_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP041359.1\|WP_001551551.1\|140718_141756_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299

Protein	Function_ID	Function_description	E-value
NZ_CP041359.1\|WP_001551555.1\|148373_151073_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP041359.1\|WP_000956458.1\|151267_151420_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
NZ_CP041359.1\|WP_000206445.1\|145110_146166_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.45802e-155
NZ_CP041359.1\|WP_001551549.1\|137151_137475_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.41878e-52
NZ_CP041359.1\|WP_001521160.1\|151684_152419_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.91666e-137
NZ_CP041359.1\|WP_001295182.1\|133650_134412_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP041359.1\|WP_000246131.1\|135917_136628_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	4.32778e-121
NZ_CP041359.1\|WP_000029331.1\|146180_146717_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	4.72866e-28
NZ_CP041359.1\|WP_001551554.1\|146713_148276_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP041359.1\|WP_001551553.1\|144353_145100_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	5.14306e-47
NZ_CP041359.1\|WP_000517476.1\|136646_136958_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP041359.1\|WP_001219242.1\|135438_135918_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP041359.1\|WP_000568924.1\|134392_135442_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP041359.1\|WP_001551550.1\|138129_139557_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP041359.1\|WP_000063172.1\|142511_142805_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.07297e-64
NZ_CP041359.1\|WP_000281438.1\|143721_144372_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	3.43159e-91
NZ_CP041359.1\|WP_000144858.1\|142801_143725_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.11358e-157
NZ_CP041359.1\|WP_001173673.1\|137524_138130_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP041359.1\|WP_000372108.1\|139558_140467_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP041359.1\|WP_001551551.1\|140718_141756_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0

>NZ_CP041359.1|WP_001551551.1|140718_141756_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGTSWHDVRLDNQQHIDKALPGRIERRCRDVIRIMLPLVKELAKAS
>NZ_CP041359.1|WP_000372108.1|139558_140467_-|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP041359.1|WP_001551550.1|138129_139557_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVGYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADESLPAVQSASVDVVWMAEQPLSPGQRYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATTAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP041359.1|WP_001173673.1|137524_138130_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP041359.1|WP_001551549.1|137151_137475_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVIGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP041359.1|WP_000517476.1|136646_136958_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP041359.1|WP_000246131.1|135917_136628_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKHVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP041359.1|WP_001219242.1|135438_135918_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP041359.1|WP_000568924.1|134392_135442_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP041359.1|WP_001295182.1|133650_134412_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP041359.1|WP_000063172.1|142511_142805_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQISQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGVRLVSFLPVDNQ
>NZ_CP041359.1|WP_000144858.1|142801_143725_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>NZ_CP041359.1|WP_000281438.1|143721_144372_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESDIFTIECRPFAPELRTGQSLCFNLRANPTICKAGKRHDLLMEAKRQVRGQVEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP041359.1|WP_001551553.1|144353_145100_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNSHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSAPDLLSAIISRRDYYTDAWWMVAVATTPDAPYRLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQDSFRELKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>NZ_CP041359.1|WP_000206445.1|145110_146166_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTEQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP041359.1|WP_000029331.1|146180_146717_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGNRASLRRSTTVNDVCLSEGFRSLLMQTHTLWKIEAQEWRFTALALVAAVSANVKAIDERQPFAAQLAAVMSEGRFTRLSAVKTPDDLLRQLRRAVKLLNGSVNLISLAEDIFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQN
>NZ_CP041359.1|WP_001551554.1|146713_148276_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRYKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKDQRRWDDIWEDGLEAEKLREALLSLDHAFQFGPDSPSFMQDFEALTGDKVPVASLLPEIPGVQTTKFNKDHFIKRGVTEHLCPQCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWLNVMPQDEADLPLPKKFDDLIFPWLGPTRTSELAGAVVTHDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICDEQNDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEIWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP041359.1|WP_001551555.1|148373_151073_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKSNCFGLTDYFRQLGFADTEQAAQFFAWLLCWHDTGKFARSFQQLYLHPQLKVPEGARKNYEKISHSTLGYWLWHHYLSEYEELLPSSSLSPRKLKRVMEMWMPMTTGHHGRPPDRIDELDNFLPEDKAAARDFLLEIKVLFPLIEIPAFWDDDEGIELLKQLSWYISATVVLADWTGSSTRFFPRVAQAMDIKDYWQKALVQAQNALTVFPPKAQTAPFTGINTLFPFIEHPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQAFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGAEGQQEAPFLEKDDYPWLTHVTKSDVHSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVYRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKSCSLQRSSQVIVCTQVIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDAPGDEWFGSAMRNSAYVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLSTCIAGVVKPYANGAHAWEMSVVRVRRSWWKKHRDEFSLLEGDAFRQWCIEQRQEPEMANVILVTDDESCGYSAMEGLTGKVG
>NZ_CP041359.1|WP_000956458.1|151267_151420_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP041359.1|WP_001521160.1|151684_152419_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRTNLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP041359_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041359_2

169553-170435

Orphan

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	PILER-CR

14 spacers

The CRISPR arrays of NZ_CP041359_2

>merge|NZ_CP041359|2|169553-170435|CRISPRCasFinder,CRT,PILER-CR
TGGTTTATTCCCGCTGGTGCGGGGAACTCATCAGTGATATCCAACATTGCGGAGCTAAACGCGGTTTATCCCCGCTGGCGCGGGGAACTCACGAACGCGGCACACCAGGGCGTCTCATCGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCGGCACATGCCTGATCATATGTGTAGCAACGGTCGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGTACCATTACATCAAAGAGTGCAGAATCCCGGTTTATCCCCGCTGGCGCGGGGAACTCGGTGCTGTCTTTACCGTACATTGCGCGAATCTCGGTTTATCCCCGCTGGCGCGGGGAACTCATATCCTTATTGGAATACATGAGCTGCGCCCACGGTTTATCCCCGCTGGCGCGGGGAACTCCGCGACACGCTGGCAGAGCAGCTATCCCACCACGGTTTATCCCCGCTGGCGCGGGGAACTCTTTTTCCAGCTCCAGCATTGCTGTTGTATTGACGGTTTATCCCCGCTGGCGCGGGGAACTCTTAATCAGGTCGTCGTACTCAGCGCCGCTGGCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCACGGCAGGCCATATGAAATACCTGTTGCTCGGTTTATCCCCGCTGGCGCGGGGAACTCTAATATCCCTGGCGATAATCAACCGGCTTACTCGGTTTATCCCCGCTGGCGCGGGGAACTCGAGAGCGAGGGGAGATTCCGGCAGGGCGTGCACGGTTTATCCCCGCTGGCGCGGGGAACTCAAAACCGATATTTACCAGGTTGTTACTGATAGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGATGTTCAAGTGTGTATGCACACTCAGCAAACGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP041359|2|2|169553-170435|CRISPRCasFinder
TGGTTTATTCCCGCTGGTGCGGGGAACTC	ATCAGTGATATCCAACATTGCGGAGCTAAACG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACGAACGCGGCACACCAGGGCGTCTCATCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGCACATGCCTGATCATATGTGTAGCAACGGT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCAGTACCATTACATCAAAGAGTGCAGAATCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGTGCTGTCTTTACCGTACATTGCGCGAATCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATATCCTTATTGGAATACATGAGCTGCGCCCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CGCGACACGCTGGCAGAGCAGCTATCCCACCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTTTTCCAGCTCCAGCATTGCTGTTGTATTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTAATCAGGTCGTCGTACTCAGCGCCGCTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGCACGGCAGGCCATATGAAATACCTGTTGCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAATATCCCTGGCGATAATCAACCGGCTTACT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GAGAGCGAGGGGAGATTCCGGCAGGGCGTGCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AAAACCGATATTTACCAGGTTGTTACTGATAG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGATGTTCAAGTGTGTATGCACACTCAGCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP041359|2|2|169553-170435|CRT
TGGTTTATTCCCGCTGGTGCGGGGAACTC	ATCAGTGATATCCAACATTGCGGAGCTAAACG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACGAACGCGGCACACCAGGGCGTCTCATCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGCACATGCCTGATCATATGTGTAGCAACGGT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCAGTACCATTACATCAAAGAGTGCAGAATCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGTGCTGTCTTTACCGTACATTGCGCGAATCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATATCCTTATTGGAATACATGAGCTGCGCCCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CGCGACACGCTGGCAGAGCAGCTATCCCACCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTTTTCCAGCTCCAGCATTGCTGTTGTATTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTAATCAGGTCGTCGTACTCAGCGCCGCTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGCACGGCAGGCCATATGAAATACCTGTTGCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAATATCCCTGGCGATAATCAACCGGCTTACT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GAGAGCGAGGGGAGATTCCGGCAGGGCGTGCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AAAACCGATATTTACCAGGTTGTTACTGATAG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGATGTTCAAGTGTGTATGCACACTCAGCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP041359|2|2|169614-170435|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACGAACGCGGCACACCAGGGCGTCTCATCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGCACATGCCTGATCATATGTGTAGCAACGGT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCAGTACCATTACATCAAAGAGTGCAGAATCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGTGCTGTCTTTACCGTACATTGCGCGAATCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATATCCTTATTGGAATACATGAGCTGCGCCCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CGCGACACGCTGGCAGAGCAGCTATCCCACCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTTTTCCAGCTCCAGCATTGCTGTTGTATTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTAATCAGGTCGTCGTACTCAGCGCCGCTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGCACGGCAGGCCATATGAAATACCTGTTGCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAATATCCCTGGCGATAATCAACCGGCTTACT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GAGAGCGAGGGGAGATTCCGGCAGGGCGTGCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AAAACCGATATTTACCAGGTTGTTACTGATAG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGATGTTCAAGTGTGTATGCACACTCAGCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041359.1\|WP_000036723.1\|172670_173969_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP041359.1\|WP_001551561.1\|171738_172611_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP041359.1\|WP_000581937.1\|177119_177368_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP041359.1\|WP_001551562.1\|177445_179680_-\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP041359.1\|WP_001071643.1\|175921_176713_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP041359.1\|WP_001521167.1\|161316_162096_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP041359.1\|WP_000109536.1\|158024_158285_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP041359.1\|WP_000059301.1\|163504_164959_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP041359.1\|WP_000210878.1\|174056_175694_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP041359.1\|WP_001521165.1\|160459_161320_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP041359.1\|WP_001130266.1\|158301_158877_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP041359.1\|WP_001098106.1\|162073_163411_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP041359.1\|WP_001551563.1\|179727_181029_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP041359.1\|WP_000254738.1\|176784_177120_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP041359.1\|WP_001551559.1\|165028_165814_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP041359.1\|WP_142767525.1\|159011_160360_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP041359.1\|WP_000186450.1\|181085_183842_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP041359.1\|WP_000039721.1\|167436_168915_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP041359.1\|WP_001199973.1\|170773_171445_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP041359.1\|WP_001551560.1\|166132_167410_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949

Protein	Function_ID	Function_description	E-value
NZ_CP041359.1\|WP_000036723.1\|172670_173969_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP041359.1\|WP_001551561.1\|171738_172611_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	9.30455e-97
NZ_CP041359.1\|WP_000581937.1\|177119_177368_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP041359.1\|WP_001551562.1\|177445_179680_-\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP041359.1\|WP_001071643.1\|175921_176713_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	9.36315e-160
NZ_CP041359.1\|WP_001521167.1\|161316_162096_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	8.81851e-61
NZ_CP041359.1\|WP_000109536.1\|158024_158285_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	4.39108e-42
NZ_CP041359.1\|WP_000059301.1\|163504_164959_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.6361e-82
NZ_CP041359.1\|WP_000210878.1\|174056_175694_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP041359.1\|WP_001521165.1\|160459_161320_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	8.34461e-89
NZ_CP041359.1\|WP_001130266.1\|158301_158877_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP041359.1\|WP_001098106.1\|162073_163411_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.1165e-50
NZ_CP041359.1\|WP_001551563.1\|179727_181029_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP041359.1\|WP_000254738.1\|176784_177120_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP041359.1\|WP_001551559.1\|165028_165814_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.56263e-137
NZ_CP041359.1\|WP_142767525.1\|159011_160360_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.09362e-52
NZ_CP041359.1\|WP_000186450.1\|181085_183842_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP041359.1\|WP_000039721.1\|167436_168915_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	2.76431e-108
NZ_CP041359.1\|WP_001199973.1\|170773_171445_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP041359.1\|WP_001551560.1\|166132_167410_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	7.75283e-29

>NZ_CP041359.1|WP_000039721.1|167436_168915_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKTWAWSEDAAVMEKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKLLPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFMPVESNAKRYNAMNKGIFKELTKHTDVILKKSYEVMHGELGNADSIQSWSNA
>NZ_CP041359.1|WP_001551560.1|166132_167410_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPIAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGYWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP041359.1|WP_001551559.1|165028_165814_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVNILINNAGICKLNKVLNFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP041359.1|WP_000059301.1|163504_164959_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWTLLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP041359.1|WP_001098106.1|162073_163411_-|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISESPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVATATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLAAVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP041359.1|WP_001521167.1|161316_162096_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGNSGPDVSLLRSLLGADEQAAAALLLAQRKNGTSMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQYQNPLELIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDAPFITLEQRTENGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAVGKAAIIRKTVAAESPAMQCLQLARAEQQRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP041359.1|WP_001521165.1|160459_161320_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAATASWQAAQDFSGCTLAHWKIEPQPAVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGADKNATLPSGMQQLNIVPGALPDWLVSIENLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHAECQ
>NZ_CP041359.1|WP_142767525.1|159011_160360_+|IS3-family-transposase
MKHSFEVKLAAVNHYLAGHAGIISTAKLFQLSHTSLSHWINLFLLHGPRALDCRHRRSYSPEDKLCVVLYALGHSESLPRVAARFNIPSHNTVKNWIKGYRKSGNEAFIRRRKEKSMTRSDDTHENEANMTPEEMKNELRYLRAENAYLKAMQEHLLEKKPPGAGEKTKVIRSLRCGHCQSDLLKAAGLARSTLYYQLSLQKAKDKYADVKQLIASIFHEHRGCYGYRRIHCELQKRGLKFSGKTVRKLMQQLGLKSPVRLKKYRSYRGNMGLAAENILQRQFKAEAPCEKWVTDITEFRAGGQKLYLSPILDLFNGEIVAWETACRPTEELVKRMLNKGLESLAEGEKPLLHSDQGWHYRIKSYQSDLADKGLVQSMSRKGNCLDNAVMENFFGHLKEEIYYRRDYRNVEELENAVNEYITYWNQKRIKLSLGGLSPVEYRTEHQKAG
>NZ_CP041359.1|WP_001130266.1|158301_158877_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP041359.1|WP_000109536.1|158024_158285_+|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTVQRLINACPAGLFSLTPEGDLRVDYRGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP041359.1|WP_001199973.1|170773_171445_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP041359.1|WP_001551561.1|171738_172611_+|YgcG-family-protein
MRYFILIFTFVCSFVAAQPTIVPSLQQQVTDLTSSLNSQEKKELTYKLESIFNNTQVQIAVLIVPTTKDETIEKYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAQGLELAINALNNQLTSQHQYPANPSEIESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSSVCISAIYLLDLFLFSDKTFSSAVFFFFFTFTTIMVFTCLCVLQKKASGRSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW
>NZ_CP041359.1|WP_000036723.1|172670_173969_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP041359.1|WP_000210878.1|174056_175694_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP041359.1|WP_001071643.1|175921_176713_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVIDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP041359.1|WP_000254738.1|176784_177120_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP041359.1|WP_000581937.1|177119_177368_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP041359.1|WP_001551562.1|177445_179680_-|GTP-diphosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKISGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP041359.1|WP_001551563.1|179727_181029_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASEDLQQRSKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVAGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVACALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNDLHNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP041359.1|WP_000186450.1|181085_183842_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP041359_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041359_3

3078472-3078613

Orphan

Consensus_repeat	Method
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041359_3

>merge|NZ_CP041359|3|3078472-3078613|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAGAAATCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGCGCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

>NZ_CP041359|3|3|3078472-3078613|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	AAATCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGC
GCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041359.1\|WP_000254365.1\|3075580_3075928_+\|succinate-dehydrogenase-membrane-anchor-subunit	unknown	unknown	gnl\|CDD\|181901
NZ_CP041359.1\|WP_001308496.1\|3075197_3075587_+\|succinate-dehydrogenase-cytochrome-b556-subunit	unknown	unknown	gnl\|CDD\|181900
NZ_CP041359.1\|WP_001316209.1\|3085186_3085333_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225533
NZ_CP041359.1\|WP_001550817.1\|3067935_3068997_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|366088
NZ_CP041359.1\|WP_001181473.1\|3078775_3081577_+\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499
NZ_CP041359.1\|WP_000724204.1\|3088914_3090195_-\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|224220
NZ_CP041359.1\|WP_001550818.1\|3068993_3069725_-\|molecular-chaperone	unknown	unknown	gnl\|CDD\|225663
NZ_CP041359.1\|WP_001550823.1\|3087154_3088807_-\|class-I-fumarate-hydratase	unknown	unknown	gnl\|CDD\|185290
NZ_CP041359.1\|WP_020628708.1\|3069739_3072190_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729
NZ_CP041359.1\|WP_000785834.1\|3073205_3074489_-\|citrate-(Si)-synthase	unknown	unknown	gnl\|CDD\|180164
NZ_CP041359.1\|WP_001550821.1\|3084068_3084938_+\|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|180194
NZ_CP041359.1\|WP_001235263.1\|3077709_3078426_+\|succinate-dehydrogenase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|235652
NZ_CP041359.1\|WP_001513234.1\|3074694_3074802_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041359.1\|WP_001550820.1\|3075927_3077694_+\|succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|181594
NZ_CP041359.1\|WP_001048602.1\|3082902_3084069_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234813
NZ_CP041359.1\|WP_000472419.1\|3072249_3072816_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP041359.1\|WP_001550822.1\|3085603_3086509_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP041359.1\|WP_071526520.1\|3085035_3085227_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041359.1\|WP_000099850.1\|3081591_3082809_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl\|CDD\|235571
NZ_CP041359.1\|WP_000388207.1\|3086542_3087145_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl\|CDD\|235662

Protein	Function_ID	Function_description	E-value
NZ_CP041359.1\|WP_000254365.1\|3075580_3075928_+\|succinate-dehydrogenase-membrane-anchor-subunit	gnl\|CDD\|181901	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit.	5.54037e-58
NZ_CP041359.1\|WP_001308496.1\|3075197_3075587_+\|succinate-dehydrogenase-cytochrome-b556-subunit	gnl\|CDD\|181900	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit.	5.48862e-83
NZ_CP041359.1\|WP_001316209.1\|3085186_3085333_+\|hypothetical-protein	gnl\|CDD\|225533	COG2986, HutH, Histidine ammonia-lyase [Amino acid transport and metabolism].	4.49849e-08
NZ_CP041359.1\|WP_001550817.1\|3067935_3068997_-\|fimbrial-protein	gnl\|CDD\|366088	pfam00419, Fimbrial, Fimbrial protein.	0.000407711
NZ_CP041359.1\|WP_001181473.1\|3078775_3081577_+\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
NZ_CP041359.1\|WP_000724204.1\|3088914_3090195_-\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|224220	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion].	9.71609e-118
NZ_CP041359.1\|WP_001550818.1\|3068993_3069725_-\|molecular-chaperone	gnl\|CDD\|225663	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion].	3.60137e-72
NZ_CP041359.1\|WP_001550823.1\|3087154_3088807_-\|class-I-fumarate-hydratase	gnl\|CDD\|185290	PRK15392, PRK15392, class I fumarate hydratase.	0
NZ_CP041359.1\|WP_020628708.1\|3069739_3072190_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP041359.1\|WP_000785834.1\|3073205_3074489_-\|citrate-(Si)-synthase	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0
NZ_CP041359.1\|WP_001550821.1\|3084068_3084938_+\|succinate--CoA-ligase-subunit-alpha	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
NZ_CP041359.1\|WP_001235263.1\|3077709_3078426_+\|succinate-dehydrogenase-iron-sulfur-subunit	gnl\|CDD\|235652	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	3.48257e-167
NZ_CP041359.1\|WP_001550820.1\|3075927_3077694_+\|succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|181594	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_CP041359.1\|WP_001048602.1\|3082902_3084069_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
NZ_CP041359.1\|WP_000472419.1\|3072249_3072816_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	2.40726e-36
NZ_CP041359.1\|WP_001550822.1\|3085603_3086509_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	3.89241e-62
NZ_CP041359.1\|WP_000099850.1\|3081591_3082809_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	0
NZ_CP041359.1\|WP_000388207.1\|3086542_3087145_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl\|CDD\|235662	PRK05986, PRK05986, cob(I)yrinic acid a,c-diamide adenosyltransferase.	2.05403e-116

>NZ_CP041359.1|WP_001235263.1|3077709_3078426_+|succinate-dehydrogenase-iron-sulfur-subunit
MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA
>NZ_CP041359.1|WP_001550820.1|3075927_3077694_+|succinate-dehydrogenase-flavoprotein-subunit
MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNADGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY
>NZ_CP041359.1|WP_000254365.1|3075580_3075928_+|succinate-dehydrogenase-membrane-anchor-subunit
MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV
>NZ_CP041359.1|WP_001308496.1|3075197_3075587_+|succinate-dehydrogenase-cytochrome-b556-subunit
MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
>NZ_CP041359.1|WP_001513234.1|3074694_3074802_-|hypothetical-protein
MRKSYEVGISPKINLCNSVEVLTNSFGTVISGKQV
>NZ_CP041359.1|WP_000785834.1|3073205_3074489_-|citrate-(Si)-synthase
MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDGMKIARPRQLYTGYEKRDFKSDIKR
>NZ_CP041359.1|WP_000472419.1|3072249_3072816_-|type-1-fimbrial-protein
MFKGQKTLAALAVSLLFTAPVYAADEGSGEIHFKGEVIEAPCEIHQDDIDKEVELGQVTTSHINQSHHSDAVAVDLRLVNCDLENSNNGSGGKISKVAVTFDSSAKTTGADPILNNTSTGEATGVGVRLMNKDQSNIVLGTATPDIDLAPTSSEQTLNFFAWMEQIDQATPVTPGAVTANATYVLDYK
>NZ_CP041359.1|WP_020628708.1|3069739_3072190_-|fimbrial-biogenesis-outer-membrane-usher-protein
MNIYRLSFISCLVMAIPSALAVEFNLNVLDKSMRDRIDISLLKEKGGIAPGEYFVSVAVNNNQISNGQKIDWKKNGDQTIPCINDLLVDKFGLKPEVRQSLPRLNQCVDFSSRPEILFIFDQASQQLNITIPQAWLAWHSDNWTPPSTWKEGVAGVLMDYNLFASSYRPQDGSNSTNLNAYGTAGINAGAWRLRSDYQLNQTDSDDNHEQSGEISRTYLFRPLPQLGSKLTLGETDFSSNIFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQTNATVTVSHSGRVIYQKKVLPGPFIIDDLNQSVQGTLDVKVTEEDGRVNNFQVSAASTPFLTRQGQVRYKLAAGQPRTSMSHQTENETFFSNEVSWGMLSNTSLYGGLLISGDNYHSAAMGIGQNMLWLGALSFDVTWASSQFDTQQDERGLSYRFNYSKQVDATNSTISLAAYRFSDRHFHSYANYLDHKYNDNDAQDEKQTISLSVGQPITPLNLNLYANLLHQTWWNADASTTANITAGFNVDIGNWRDISISTSFNTTHYEDKDRDNQIYLSISLPFGNGGRVGYDMQNSNHSTTHRMSWNDTLDERNSWGMSTGLQSDRPDNGAQVSGNYQHLSSAGEWDISGTYAANDYSSVSSSWSGSFTATQYGAAFHRRSSTNEPRLMVSTDGVADIPVQGNLDYTNHFGIAVVPLISSYQPSTVAVNMNDLPDGVTVADNVIKETWIEGAIGYKSLASRSGKDVNVIIRNASGQLPPLGADIRQEDSGISVGIVGEEGHAWLSGVAENQQFTVIWGDSQRCSIHLPEHMEDTANRLILPCH
>NZ_CP041359.1|WP_001550818.1|3068993_3069725_-|molecular-chaperone
MTFMKGLPLLLLVASLCSYAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEPKATTQVRIVKQASTAKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQANQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGSYSGRQFYLGYMDDYGALRMTTLNCSGQCRLQAVEAKK
>NZ_CP041359.1|WP_001550817.1|3067935_3068997_-|fimbrial-protein
MSAGKGVLLVICLVFLPLKSALALNCYFGSSGGSVEKSEVIQPFAVPGNAKPGDKIWESDDIKIPVYCDNNTNGNFESEHVYAWVNPYPGVQDRYYQLGVTYNGVDYDASLGKSRIDTNQCIDSKNINIYTPEQIIAMGWQNKICSGDPANIHMSRTFLARMRLYVKIREMPPHDYQSTLSDYIVVQFDGAGSVNEDPTAQNLKYHITGLENIRVLDCSVNFSISPETQVIDFGKFNLLDIRRHTMSKTFSIKTTKSQNDQCTDGFKVSSSFYTEETLVEEDKALLIGNGLKLRLLDENASPYTFNKYAEYADFTSDMLIYEKTYTAELSSIPGTPIEAGPFDTVVLFKINYN
>NZ_CP041359.1|WP_001181473.1|3078775_3081577_+|2-oxoglutarate-dehydrogenase-E1-component
MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE
>NZ_CP041359.1|WP_000099850.1|3081591_3082809_+|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase
MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSTGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV
>NZ_CP041359.1|WP_001048602.1|3082902_3084069_+|ADP-forming-succinate--CoA-ligase-subunit-beta
MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK
>NZ_CP041359.1|WP_001550821.1|3084068_3084938_+|succinate--CoA-ligase-subunit-alpha
MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEVLKTVLK
>NZ_CP041359.1|WP_071526520.1|3085035_3085227_-|hypothetical-protein
MNIAFVDLLNATVKRWEASASGNDSKFAVVLIRGLRSVAAIHSGCGHAVKPAVRFRPWLTFKA
>NZ_CP041359.1|WP_001316209.1|3085186_3085333_+|hypothetical-protein
MTVALSKSTKAMFTAYRQVVPFVSQDRVFTPDIAASQKFLEGYAINQK
>NZ_CP041359.1|WP_001550822.1|3085603_3086509_+|LysR-family-transcriptional-regulator
MRGKIPKTELLVTFEVVARHESYTRAAEELALTQSAVFRQVSALEEFLHTPLFSHSKKRIFLNDAGKYYLGIVKETLNKLERDTNTIMTWQPTVKVIELAVNPTFSTHWLIPNLHEFTKLHPDIIVNIHSLANNGDFLNREYDAVIMRENFCAPWAEVEYLFDEEILPVCSGSLLAMSDQKLSVAELLTELPLLHQSTRITGWEEWFALSGVSSPLVNNGPRFDLLSMLIAAVRSNLGVALLPRFAIQHDLDSGDMVIPCDVPIRTGNRFIMTWQEEKSDSPHLQQFREWLLAKSVVPQAM
>NZ_CP041359.1|WP_000388207.1|3086542_3087145_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MEARISTERHVQRQQKLKEQVDTRVAAAIEKKGILIVFTGNGKGKSTAAFGTVTRAVGHGKTVGVAQYIKGQWDNGEYNLLQPLGVEFHIMGTGFTWETQNRQADIDAAKEVWSESKRMLADKRYDLVVLDELTYMLAYHYLDTEEVIASLQNRPAQQSVIVTGRGCHSQILKMADTVSEIRPVKHAFDNGIQAQPGIDW
>NZ_CP041359.1|WP_001550823.1|3087154_3088807_-|class-I-fumarate-hydratase
MSKPFIWQEPFLQNKDGTEYTLISDQHITVTELDGEEVIKIAPEALTLLARQAFYEASFFLRSAHLQQVASILNDPQASSNDKYVALQLLRNAEVSAKGVLPNCQDTGTATIVASKGQQIWTGGNDAEALSKGIYSTFQENNLRFSQNAPLDMYTEVNTQTNLPAQIDISAVAGNEYHFLCVNKGGGSANKAALYQETKSLLQPEKLTAFLIEKMKSLGTAACPPYHIAFVVGGLSADQTLKVAKLASTKYYDNLPTSGNEQGQAFRDIELEKVLLEASQQFGIGAQFGGKYFAHDIRVIRLPRHGGSCPIAMALSCSADRNIKAKINKHGIWLEKLEHNPGQYIPASLREENHAQHVQLDLNRPLRDVMQDLARLPVGTRVSLSGPIVVARDIAHAKIKARLDSGEPMPDYLKHHIVYYAGPAKTPENMACGSLGPTTGGRMDGYVDTFQAAGGSLVMLSKGNRSQQVTDACHKHGGFNLGSIGGAAALLAQEYVKSLRCLEYPELGMEAVWMMEVENLPAFILVDDKGNNFFSQFEQQHRCASCPAGH
>NZ_CP041359.1|WP_000724204.1|3088914_3090195_-|dicarboxylate/amino-acid:cation-symporter
MKKISLTTMILLALVLGMIIGVVLNNTASPETAKLYAQEISIFTTIFLRLIKMIIAPLVVSTLVVGIAKMGDAKALGRIFSKTLFLFICASLLSIALGLITVNFFMPGTGINFVAHGAETTGVVASEPFTLKVFISHAFPTSIVDAMAHNEILQIVVFSIFLGCSLTAIGEKGSAIVHALDSLAHAMLKLTGYVMLFAPLTVFAAISALIAERGLAVMVSAGIFMGEFYFTMLLLWVLLIGLAIVYVGPCIRRLTRALSEPALLAFTTSSSEAAFPGTLEKLEQFGVSPKIASFVLPIGYSFNLVGSMAYCSFATVFIAQACNIHLSIGEQITMLLILMLTSKGMAGVPRASMVVIAATLNQFNIPEAGLILLMGVDPFLDMGRSATNVMSNAMGAAMVSRWEGEHFGEGCRGKALKPNESNVALP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP041359_1	1.1\|141867\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	141867-141898	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246876-246907	0	1.0
NZ_CP041359_1	1.2\|141928\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	141928-141959	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246754-246785	0	1.0
NZ_CP041359_1	1.3\|141989\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	141989-142020	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246693-246724	0	1.0
NZ_CP041359_1	1.4\|142050\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142050-142081	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246632-246663	0	1.0
NZ_CP041359_1	1.5\|142111\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142111-142142	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246571-246602	0	1.0
NZ_CP041359_1	1.6\|142172\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142172-142203	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246510-246541	0	1.0
NZ_CP041359_1	1.7\|142233\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142233-142264	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246449-246480	0	1.0
NZ_CP041359_1	1.8\|142294\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142294-142325	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246388-246419	0	1.0
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	85745-85776	0	1.0
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP025883	Escherichia coli strain 503440 plasmid p503440_100, complete sequence	74209-74240	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP025894	Escherichia coli strain 503025 plasmid p503025_100, complete sequence	77020-77051	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP025868	Escherichia coli strain 504211 plasmid p504211_100, complete sequence	18988-19019	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	CP043018	Escherichia coli strain 388808_gen plasmid unnamed3, complete sequence	7820-7851	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	85863-85894	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_AP017612	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence	84770-84801	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP025870	Escherichia coli strain 503829 plasmid p503829_100, complete sequence	91177-91208	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP028430	Escherichia coli strain RM9131 plasmid pRM9131-1, complete sequence	36203-36234	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP053233	Escherichia coli strain SCU-306 plasmid pSCU-306-2, complete sequence	88329-88360	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	33813-33844	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	147147-147178	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	57925-57956	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP019002	Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence	69838-69869	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP028433	Escherichia coli strain RM9975 plasmid pRM9975-1, complete sequence	94312-94343	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	NZ_CP012114	Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence	89288-89319	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	MK972693	Salmonella phage SI23, complete genome	20077-20108	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	MK770415	Salmonella phage SF11, complete genome	1521-1552	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	MK972694	Salmonella phage SE22, complete genome	41165-41196	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	MK770414	Salmonella phage SE16, complete genome	5417-5448	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	MK972686	Salmonella phage SF3, complete genome	24871-24902	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	MK972685	Salmonella phage SE10, complete genome	26090-26121	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	MK972687	Salmonella phage SE1 (in:P22virus), complete genome	16364-16395	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	MT740315	Escherichia phage JEP4, complete genome	24063-24094	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	MK972692	Salmonella phage SE21, complete genome	40301-40332	1	0.969
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	MF356679	Escherichia phage D6, complete genome	78029-78060	1	0.969
NZ_CP041359_2	2.2\|169643\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	169643-169674	32	KT898133	Aeromonas phage phiARM81ld, complete genome	45655-45686	2	0.938
NZ_CP041359_2	2.10\|170131\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170131-170162	32	NZ_CP021720	Escherichia coli strain AR_0128 plasmid tig00000793, complete sequence	108177-108208	2	0.938
NZ_CP041359_2	2.10\|170131\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170131-170162	32	NZ_CP020051	Escherichia coli strain AR_0118 plasmid unitig_3, complete sequence	58915-58946	2	0.938
NZ_CP041359_2	2.10\|170131\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170131-170162	32	KP869108	Escherichia coli O157 typing phage 10, complete genome	36668-36699	2	0.938
NZ_CP041359_2	2.10\|170131\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170131-170162	32	KP869107	Escherichia coli O157 typing phage 9, partial genome	36792-36823	2	0.938
NZ_CP041359_2	2.10\|170131\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170131-170162	32	NC_019711	Enterobacteria phage HK629, complete genome	30059-30090	2	0.938
NZ_CP041359_2	2.10\|170131\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170131-170162	32	NC_007804	Escherichia phage phiV10, complete genome	36258-36289	2	0.938
NZ_CP041359_2	2.10\|170131\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170131-170162	32	DQ126339	Enterobacteria phage phiV10, complete genome	36258-36289	2	0.938
NZ_CP041359_2	2.10\|170131\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170131-170162	32	MT225100	Escherichia phage Lys8385Vzw, complete genome	29553-29584	2	0.938
NZ_CP041359_1	1.5\|142111\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142111-142142	32	MN855767	Bacteriophage sp. isolate 11, complete genome	31880-31911	5	0.844
NZ_CP041359_1	1.3\|141989\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	141989-142020	32	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	100800-100831	6	0.812
NZ_CP041359_2	2.9\|170070\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170070-170101	32	NZ_CP006570	Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence	200247-200278	6	0.812
NZ_CP041359_2	2.12\|170253\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170253-170284	32	NC_016040	Sulfobacillus thermotolerans strain Y0017 plasmid pY0017, complete sequence	37866-37897	6	0.812
NZ_CP041359_1	1.5\|142111\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142111-142142	32	NZ_AP017656	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence	103191-103222	7	0.781
NZ_CP041359_1	1.8\|142294\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142294-142325	32	NZ_CP036405	Komagataeibacter saccharivorans strain JH1 plasmid p221732, complete sequence	83754-83785	7	0.781
NZ_CP041359_1	1.8\|142294\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142294-142325	32	NZ_CP023037	Komagataeibacter saccharivorans strain CV1 plasmid unnamed1, complete sequence	128632-128663	7	0.781
NZ_CP041359_2	2.9\|170070\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170070-170101	32	NZ_CP047145	Streptomyces sp. HF10 plasmid plas1, complete sequence	69691-69722	7	0.781
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12111-12158	7	0.854
NZ_CP041359_1	1.3\|141989\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	141989-142020	32	NZ_CP016821	Rhodococcus sp. p52 plasmid pDF01, complete sequence	123752-123783	8	0.75
NZ_CP041359_1	1.3\|141989\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	141989-142020	32	NZ_CP016821	Rhodococcus sp. p52 plasmid pDF01, complete sequence	136491-136522	8	0.75
NZ_CP041359_1	1.9\|142355\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142355-142386	32	MG925351	Mycobacterium phage MPlant7149, complete genome	32515-32546	8	0.75
NZ_CP041359_2	2.2\|169643\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	169643-169674	32	MN901520	Halorubrum coriense virus Hardycor2, complete genome	16524-16555	8	0.75
NZ_CP041359_2	2.9\|170070\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170070-170101	32	NZ_AP017656	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence	234032-234063	8	0.75
NZ_CP041359_2	2.9\|170070\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170070-170101	32	NZ_CP011450	Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence	59722-59753	8	0.75
NZ_CP041359_2	2.11\|170192\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170192-170223	32	MN855878	Bacteriophage sp. isolate 336, complete genome	5171-5202	8	0.75
NZ_CP041359_2	2.14\|170375\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170375-170406	32	MK820013	Vibrio phage vB_VpaP_MGD2, complete genome	24310-24341	8	0.75
NZ_CP041359_1	1.4\|142050\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142050-142081	32	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	178777-178808	9	0.719
NZ_CP041359_1	1.4\|142050\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142050-142081	32	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	251306-251337	9	0.719
NZ_CP041359_1	1.4\|142050\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142050-142081	32	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	256809-256840	9	0.719
NZ_CP041359_1	1.4\|142050\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142050-142081	32	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	653047-653078	9	0.719
NZ_CP041359_1	1.4\|142050\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142050-142081	32	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	259879-259910	9	0.719
NZ_CP041359_1	1.4\|142050\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142050-142081	32	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	248019-248050	9	0.719
NZ_CP041359_1	1.8\|142294\|32\|NZ_CP041359\|PILER-CR,CRISPRCasFinder,CRT	142294-142325	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2552746-2552777	9	0.719
NZ_CP041359_2	2.9\|170070\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170070-170101	32	NZ_CP011515	Mitsuaria sp. 7 plasmid, complete sequence	162356-162387	9	0.719
NZ_CP041359_2	2.13\|170314\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170314-170345	32	MN340231	Escherichia phage phiv205-1, complete genome	16237-16268	9	0.719
NZ_CP041359_2	2.13\|170314\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170314-170345	32	CP000711	Enterobacteria phage CUS-3, complete genome	12689-12720	9	0.719
NZ_CP041359_2	2.13\|170314\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170314-170345	32	MH717096	Escherichia phage N7, complete genome	9978-10009	9	0.719
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7391-7438	9	0.812
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84215-84262	9	0.812
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87125-87172	9	0.812
NZ_CP041359_2	2.5\|169826\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	169826-169857	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1222563-1222594	10	0.688
NZ_CP041359_2	2.5\|169826\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	169826-169857	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1140926-1140957	10	0.688
NZ_CP041359_2	2.5\|169826\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	169826-169857	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1200643-1200674	10	0.688
NZ_CP041359_2	2.5\|169826\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	169826-169857	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1140023-1140054	10	0.688
NZ_CP041359_2	2.5\|169826\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	169826-169857	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1140918-1140949	10	0.688
NZ_CP041359_2	2.5\|169826\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	169826-169857	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1140274-1140305	10	0.688
NZ_CP041359_2	2.5\|169826\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	169826-169857	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1140909-1140940	10	0.688
NZ_CP041359_2	2.5\|169826\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	169826-169857	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1222678-1222709	10	0.688
NZ_CP041359_2	2.5\|169826\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	169826-169857	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1222662-1222693	10	0.688
NZ_CP041359_2	2.5\|169826\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	169826-169857	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1222655-1222686	10	0.688
NZ_CP041359_2	2.8\|170009\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170009-170040	32	MN693290	Marine virus AFVG_25M557, complete genome	19244-19275	10	0.688
NZ_CP041359_2	2.8\|170009\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170009-170040	32	MN693243	Marine virus AFVG_25M556, complete genome	14971-15002	10	0.688
NZ_CP041359_2	2.9\|170070\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170070-170101	32	MN850587	Escherichia phage mistaenkt, complete genome	62540-62571	10	0.688
NZ_CP041359_2	2.9\|170070\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170070-170101	32	MH791400	UNVERIFIED: Escherichia phage EcSzw-2, complete genome	63164-63195	10	0.688
NZ_CP041359_2	2.9\|170070\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170070-170101	32	MK562504	Enterobacteria phage CHB7, complete genome	51394-51425	10	0.688
NZ_CP041359_2	2.9\|170070\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170070-170101	32	NC_028808	Escherichia phage SUSP1, complete genome	60791-60822	10	0.688
NZ_CP041359_2	2.9\|170070\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170070-170101	32	MH791413	UNVERIFIED: Escherichia phage EcSzw_1, complete genome	62597-62628	10	0.688
NZ_CP041359_2	2.9\|170070\|32\|NZ_CP041359\|CRISPRCasFinder,CRT,PILER-CR	170070-170101	32	NC_028935	Escherichia phage SUSP2, complete genome	58756-58787	10	0.688
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15006-15053	10	0.792
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3371-3418	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4012-4059	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4113-4160	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3370-3417	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4011-4058	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4112-4159	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3370-3417	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4011-4058	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4112-4159	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3370-3417	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4011-4058	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4112-4159	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	270-317	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	101195-101242	11	0.771
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208980-209027	12	0.75
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219474-219521	12	0.75
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210308-210355	12	0.75
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191263-191310	12	0.75
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31250-31297	12	0.75
NZ_CP041359_3	3.1\|3078519\|48\|NZ_CP041359\|CRISPRCasFinder	3078519-3078566	48	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	158-205	12	0.75

1. spacer 1.1|141867|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ggctttaaccacacgagcaagtccttcgctgg	CRISPR spacer
ggctttaaccacacgagcaagtccttcgctgg	Protospacer
********************************

2. spacer 1.2|141928|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcaccgcgttaatccggcagaaaaacaaca	CRISPR spacer
tcgcaccgcgttaatccggcagaaaaacaaca	Protospacer
********************************

3. spacer 1.3|141989|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ccgacaatctccgcctccagtcggtcgacctg	CRISPR spacer
ccgacaatctccgcctccagtcggtcgacctg	Protospacer
********************************

4. spacer 1.4|142050|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
tgtgcccgactgcgtgccgcgtcgagcgcctg	Protospacer
********************************

5. spacer 1.5|142111|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ttcgccgccatcatcctgtggtgccagttgac	CRISPR spacer
ttcgccgccatcatcctgtggtgccagttgac	Protospacer
********************************

6. spacer 1.6|142172|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

gcgcctcggttgtttagccatgctcagcccca	CRISPR spacer
gcgcctcggttgtttagccatgctcagcccca	Protospacer
********************************

7. spacer 1.7|142233|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ctttccacccaggcactgatactccacataaa	CRISPR spacer
ctttccacccaggcactgatactccacataaa	Protospacer
********************************

8. spacer 1.8|142294|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcgccgggcgcggttacccgctgcgaaaat	CRISPR spacer
gatcgccgggcgcggttacccgctgcgaaaat	Protospacer
********************************

9. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 0, identity: 1.0

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactcagcaaa	Protospacer
********************************

10. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

11. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

12. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

13. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to CP043018 (Escherichia coli strain 388808_gen plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

14. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

15. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

16. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

17. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028430 (Escherichia coli strain RM9131 plasmid pRM9131-1, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

18. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053233 (Escherichia coli strain SCU-306 plasmid pSCU-306-2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

19. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

20. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

21. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

22. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

23. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028433 (Escherichia coli strain RM9975 plasmid pRM9975-1, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

24. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

25. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MK972693 (Salmonella phage SI23, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

26. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MK770415 (Salmonella phage SF11, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

27. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MK972694 (Salmonella phage SE22, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

28. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MK770414 (Salmonella phage SE16, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

29. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MK972686 (Salmonella phage SF3, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

30. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MK972685 (Salmonella phage SE10, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

31. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MK972687 (Salmonella phage SE1 (in:P22virus), complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

32. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MT740315 (Escherichia phage JEP4, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

33. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MK972692 (Salmonella phage SE21, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

34. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MF356679 (Escherichia phage D6, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

35. spacer 2.2|169643|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to KT898133 (Aeromonas phage phiARM81ld, complete genome) position: , mismatch: 2, identity: 0.938

acgaacgcggcacaccagggcgtctcatcgtc	CRISPR spacer
acgaacgcggcgcaccagggcgtctcgtcgtc	Protospacer
***********.**************.*****

36. spacer 2.10|170131|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021720 (Escherichia coli strain AR_0128 plasmid tig00000793, complete sequence) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaatacccgttgct	Protospacer
*************** *********.******

37. spacer 2.10|170131|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020051 (Escherichia coli strain AR_0118 plasmid unitig_3, complete sequence) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaatacccgttgct	Protospacer
*************** *********.******

38. spacer 2.10|170131|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to KP869108 (Escherichia coli O157 typing phage 10, complete genome) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaataccagttgct	Protospacer
*************** ********* ******

39. spacer 2.10|170131|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to KP869107 (Escherichia coli O157 typing phage 9, partial genome) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaataccagttgct	Protospacer
*************** ********* ******

40. spacer 2.10|170131|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NC_019711 (Enterobacteria phage HK629, complete genome) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaataccagttgct	Protospacer
*************** ********* ******

41. spacer 2.10|170131|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NC_007804 (Escherichia phage phiV10, complete genome) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaataccagttgct	Protospacer
*************** ********* ******

42. spacer 2.10|170131|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to DQ126339 (Enterobacteria phage phiV10, complete genome) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaataccagttgct	Protospacer
*************** ********* ******

43. spacer 2.10|170131|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MT225100 (Escherichia phage Lys8385Vzw, complete genome) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaataccagttgct	Protospacer
*************** ********* ******

44. spacer 1.5|142111|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to MN855767 (Bacteriophage sp. isolate 11, complete genome) position: , mismatch: 5, identity: 0.844

ttcgccgccatcatcctgtggtgccagttgac	CRISPR spacer
gaagccgccatcatcttgtggtgccagttaac	Protospacer
   ************.*************.**

45. spacer 1.3|141989|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 6, identity: 0.812

-ccgacaatctccgcctccagtcggtcgacctg	CRISPR spacer
gtctac-atctccgcctccagcgggtcgaccgg	Protospacer
 .* ** **************. ******** *

46. spacer 2.9|170070|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006570 (Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence) position: , mismatch: 6, identity: 0.812

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ataatcaggtcgtcgttctctgcgcctcggtc	Protospacer
 *************** *** ***** * * *

47. spacer 2.12|170253|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NC_016040 (Sulfobacillus thermotolerans strain Y0017 plasmid pY0017, complete sequence) position: , mismatch: 6, identity: 0.812

gagagcgaggggagattccggcagggcgtgca	CRISPR spacer
aatcgtgaggggatcttccggcagggcgtgca	Protospacer
.*  *.*******  *****************

48. spacer 1.5|142111|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcgccgccatcatcctgtggtgccagttgac	CRISPR spacer
ttcgccgccatcatcttctggtgcatgtccat	Protospacer
***************.* ******  **. *.

49. spacer 1.8|142294|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036405 (Komagataeibacter saccharivorans strain JH1 plasmid p221732, complete sequence) position: , mismatch: 7, identity: 0.781

gatcgccgggcgcggttacccgctgcgaaaat	CRISPR spacer
tatcgccgggcgcggctgcccgctgcgtcacg	Protospacer
 **************.*.*********  *

50. spacer 1.8|142294|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023037 (Komagataeibacter saccharivorans strain CV1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gatcgccgggcgcggttacccgctgcgaaaat	CRISPR spacer
tatcgccgggcgcggctgcccgctgcgtcacg	Protospacer
 **************.*.*********  *

51. spacer 2.9|170070|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047145 (Streptomyces sp. HF10 plasmid plas1, complete sequence) position: , mismatch: 7, identity: 0.781

ttaatcag--gtcgtcgtactcagcgccgctggc	CRISPR spacer
--agccggatgtcgtcgtagtccgcgccgctggc	Protospacer
  *..*.*  ********* ** ***********

52. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 7, identity: 0.854

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccgaac	Protospacer
.* ********************** ****************   *.*

53. spacer 1.3|141989|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 8, identity: 0.75

ccgacaatctccgcctccagtcggtcgacctg	CRISPR spacer
gccgcgttctcggcctccagtcggtcgatctt	Protospacer
 * .*. **** ****************.**

54. spacer 1.3|141989|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 8, identity: 0.75

ccgacaatctccgcctccagtcggtcgacctg	CRISPR spacer
gccgcgttctcggcctccagtcggtcgatctt	Protospacer
 * .*. **** ****************.**

55. spacer 1.9|142355|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to MG925351 (Mycobacterium phage MPlant7149, complete genome) position: , mismatch: 8, identity: 0.75

ctcacgcgaggcatcgatcgtgatctgattgt	CRISPR spacer
gacgcccgaggcatcggccgtgatctgatgga	Protospacer
  *.* **********..*********** *

56. spacer 2.2|169643|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MN901520 (Halorubrum coriense virus Hardycor2, complete genome) position: , mismatch: 8, identity: 0.75

acgaacgcggcacaccagggcgtctcatcgtc--	CRISPR spacer
ccgaacgcggcacacccgagcg--tcggcggcgg	Protospacer
 *************** *.***  **. ** *

57. spacer 2.9|170070|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 8, identity: 0.75

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
agagcatggtcgtcgcactcagcgccgcgggc	Protospacer
  *..  ********.************ ***

58. spacer 2.9|170070|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011450 (Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence) position: , mismatch: 8, identity: 0.75

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
agagcatggtcgtcgcactcagcgccgcgggc	Protospacer
  *..  ********.************ ***

59. spacer 2.11|170192|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MN855878 (Bacteriophage sp. isolate 336, complete genome) position: , mismatch: 8, identity: 0.75

taatatccc----tggcgataatcaaccggcttact	CRISPR spacer
----acgccatggtggcgataatcatcctgcttact	Protospacer
    *. **    ************ ** *******

60. spacer 2.14|170375|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MK820013 (Vibrio phage vB_VpaP_MGD2, complete genome) position: , mismatch: 8, identity: 0.75

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
agtacttcaagtgtgtacgcacagtcagctac	Protospacer
 *   ************.***** ***** *

61. spacer 1.4|142050|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
gacgggcgacggcgtgctgcgtcgagcgcata	Protospacer
 ..*  **** ******.*********** *.

62. spacer 1.4|142050|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
gacgggcgacggcgtgctgcgtcgagcgcata	Protospacer
 ..*  **** ******.*********** *.

63. spacer 1.4|142050|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
gacgggcgacggcgtgctgcgtcgagcgcata	Protospacer
 ..*  **** ******.*********** *.

64. spacer 1.4|142050|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
gacgggcgacggcgtgctgcgtcgagcgcata	Protospacer
 ..*  **** ******.*********** *.

65. spacer 1.4|142050|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
gacgggcgacggcgtgctgcgtcgagcgcata	Protospacer
 ..*  **** ******.*********** *.

66. spacer 1.4|142050|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
gacgggcgacggcgtgctgcgtcgagcgcata	Protospacer
 ..*  **** ******.*********** *.

67. spacer 1.8|142294|32|NZ_CP041359|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

gatcgccgggcgcggttacccgctgcgaaaat	CRISPR spacer
cgccgccgagcgcggtcacccgctgcgcgacc	Protospacer
 ..*****.*******.********** .* .

68. spacer 2.9|170070|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
cgctgcaggtcgtcgtcctcagcaccgccagc	Protospacer
.    *********** ******.****..**

69. spacer 2.13|170314|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MN340231 (Escherichia phage phiv205-1, complete genome) position: , mismatch: 9, identity: 0.719

aaaaccgatatttaccaggttgttactgatag	CRISPR spacer
aagaccgatatttgccaggttgttgtaattgt	Protospacer
**.**********.**********.. . *.

70. spacer 2.13|170314|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to CP000711 (Enterobacteria phage CUS-3, complete genome) position: , mismatch: 9, identity: 0.719

aaaaccgatatttaccaggttgttactgatag	CRISPR spacer
aagaccgatatttgccaggttgttgtaattgt	Protospacer
**.**********.**********.. . *.

71. spacer 2.13|170314|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MH717096 (Escherichia phage N7, complete genome) position: , mismatch: 9, identity: 0.719

aaaaccgatatttaccaggttgttactgatag	CRISPR spacer
aagaccgatatttgccaggttgttgtaattgt	Protospacer
**.**********.**********.. . *.

72. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 9, identity: 0.812

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  *.****** ************* ****************  *.**

73. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 9, identity: 0.812

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  *.****** ************* ****************  *.**

74. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.812

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
attttgtaggcctgataagacgcggcagcgtcgcatcaggcatcgtgc	Protospacer
*  *.*******************  ****************    **

75. spacer 2.5|169826|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

76. spacer 2.5|169826|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

77. spacer 2.5|169826|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

78. spacer 2.5|169826|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

79. spacer 2.5|169826|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

80. spacer 2.5|169826|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

81. spacer 2.5|169826|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

82. spacer 2.5|169826|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

83. spacer 2.5|169826|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

84. spacer 2.5|169826|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

85. spacer 2.8|170009|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MN693290 (Marine virus AFVG_25M557, complete genome) position: , mismatch: 10, identity: 0.688

tttttccagctccagcattgctgttgtattga	CRISPR spacer
catttccagctacagcattgatgttacttgag	Protospacer
. ********* ******** ****.. * ..

86. spacer 2.8|170009|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MN693243 (Marine virus AFVG_25M556, complete genome) position: , mismatch: 10, identity: 0.688

tttttccagctccagcattgctgttgtattga	CRISPR spacer
catttccagctacagcattgatgttacttgag	Protospacer
. ********* ******** ****.. * ..

87. spacer 2.9|170070|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MN850587 (Escherichia phage mistaenkt, complete genome) position: , mismatch: 10, identity: 0.688

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ttaatcaggtcgtcgtagacagcttttagaga	Protospacer
*****************  **** ..   .*

88. spacer 2.9|170070|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MH791400 (UNVERIFIED: Escherichia phage EcSzw-2, complete genome) position: , mismatch: 10, identity: 0.688

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ttaatcaggtcgtcgtagacagcttttagaga	Protospacer
*****************  **** ..   .*

89. spacer 2.9|170070|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MK562504 (Enterobacteria phage CHB7, complete genome) position: , mismatch: 10, identity: 0.688

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ttaatcaggtcgtcgtagacagcttttagaga	Protospacer
*****************  **** ..   .*

90. spacer 2.9|170070|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NC_028808 (Escherichia phage SUSP1, complete genome) position: , mismatch: 10, identity: 0.688

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ttaatcaggtcgtcgtagacagcttttagaga	Protospacer
*****************  **** ..   .*

91. spacer 2.9|170070|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to MH791413 (UNVERIFIED: Escherichia phage EcSzw_1, complete genome) position: , mismatch: 10, identity: 0.688

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ttaatcaggtcgtcgtagacagcttttagaga	Protospacer
*****************  **** ..   .*

92. spacer 2.9|170070|32|NZ_CP041359|CRISPRCasFinder,CRT,PILER-CR matches to NC_028935 (Escherichia phage SUSP2, complete genome) position: , mismatch: 10, identity: 0.688

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ttaatcaggtcgtcgtagacagcttttagaga	Protospacer
*****************  **** ..   .*

93. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 10, identity: 0.792

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctggt	Protospacer
.. ******** ************* ****************  ..*.

94. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. ******** ************* ****************  ..

95. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. *.****** ************* ****************  ..

96. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. *.****** ************* ****************  ..

97. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. ******** ************* ****************  ..

98. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. *.****** ************* ****************  ..

99. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. *.****** ************* ****************  ..

100. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. ******** ************* ****************  ..

101. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. *.****** ************* ****************  ..

102. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. *.****** ************* ****************  ..

103. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. ******** ************* ****************  ..

104. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. *.****** ************* ****************  ..

105. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. *.****** ************* ****************  ..

106. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggtttgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
.. *.*******************  ****************   * .

107. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.771

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
taatacaaggcctgataagacgcgccagcgtcgcatcaggcgctgaat	Protospacer
 ***   ****************** ***************.   *..

108. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

109. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

110. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

111. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

112. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.75

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
cggctgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
 ....*******************  ****************   * .

113. spacer 3.1|3078519|48|NZ_CP041359|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 12, identity: 0.75

aaatcgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gtctngtaggcctgataagacgcgtcagcgtcgcatcaggcttcaatt	Protospacer
.  * *******************. ***************    * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

118342 : 125482

Escherichia_phage(83.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272891.1\|118342_120904_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	2.7e-31	20.7
WP_001141345.1\|121009_121666_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	5.0e-51	47.0
WP_001295181.1\|121716_122484_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
WP_000847985.1\|122679_123588_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_001551546.1\|123584_124847_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.7e-135	61.2
WP_001278994.1\|124843_125482_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0

DBSCAN-SWA_2

384107 : 435535

Escherichia_phage(33.33%)

tRNA,protease,transposase,integrase

attL 395318:395333|attR 434186:434201

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000858396.1\|384107_384605_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_001327408.1\|384699_385407_+	deoxyribonuclease I	NA	NA	NA	NA
WP_001222509.1\|385486_386218_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_000593261.1\|386230_387181_+	glutathione synthase	NA	NA	NA	NA
WP_001053178.1\|387289_387853_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_000017106.1\|387852_388269_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_001327409.1\|388442_389423_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_000997795.1\|389440_390145_+	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA
WP_001094831.1\|390162_390729_+	osmotic shock tolerance protein YggT	NA	NA	NA	NA
WP_001277222.1\|390725_391016_+	YggU family protein	NA	NA	NA	NA
WP_001174738.1\|391023_391617_+	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_000239981.1\|391609_392746_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_000745192.1\|392814_393822_-	DUF1202 family protein	NA	NA	NA	NA
WP_000394106.1\|393938_394985_-	L-asparaginase 2	NA	NA	NA	NA
WP_000984796.1\|395160_395880_-	DUF2884 domain-containing protein	NA	NA	NA	NA
395318:395333	attL	NA	NA	NA	NA
WP_001107565.1\|396063_396390_-	YggL family protein	NA	NA	NA	NA
WP_000786915.1\|396389_397109_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_001327411.1\|397269_398322_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000091699.1\|398349_398625_+	oxidative damage protection protein	NA	NA	NA	NA
WP_000760323.1\|398689_399769_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_001327414.1\|399970_401227_+	nucleoside permease	NA	NA	NA	NA
WP_000839794.1\|401275_403411_-	ornithine decarboxylase	NA	NA	NA	NA
WP_000234491.1\|403809_404517_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_001218869.1\|404895_406161_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	2.1e-77	38.1
WP_000147017.1\|406416_407460_+	hypothetical protein	NA	NA	NA	NA
WP_001333708.1\|407602_407833_+	hypothetical protein	NA	NA	NA	NA
WP_001774069.1\|409153_409705_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000006213.1\|412196_412430_+	Major pilus subunit operon regulatory protein	NA	NA	NA	NA
WP_001329935.1\|412495_412783_+	hypothetical protein	NA	NA	NA	NA
WP_001327564.1\|412896_413112_+	hypothetical protein	A0A0N7C1Y0	Escherichia_phage	1.1e-26	83.6
WP_099156432.1\|413080_414207_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.5e-146	96.6
WP_001513409.1\|414297_414411_-	hypothetical protein	NA	NA	NA	NA
WP_001322950.1\|415953_416268_+	hypothetical protein	NA	NA	NA	NA
WP_001110186.1\|416264_416525_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_000109147.1\|416566_417127_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001296373.1\|417166_417595_+	DUF417 family protein	NA	NA	NA	NA
WP_142767527.1\|418303_419531_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.0e-170	95.0
WP_001327737.1\|419506_419695_+	hypothetical protein	NA	NA	NA	NA
WP_000074472.1\|419644_420838_-	MFS transporter	NA	NA	NA	NA
WP_001296374.1\|420973_422698_+	aerobactin synthase IucA	NA	NA	NA	NA
WP_001287500.1\|422698_423646_+	N(6)-hydroxylysine O-acetyltransferase	NA	NA	NA	NA
WP_001015715.1\|423645_425388_+	aerobactin synthase IucC	NA	NA	NA	NA
WP_000750130.1\|425384_426662_+	NADPH-dependent L-lysine N(6)-monooxygenase	NA	NA	NA	NA
WP_001551626.1\|426743_428945_+	ferric aerobactin receptor IutA	NA	NA	NA	NA
WP_001336025.1\|428882_429128_-	hypothetical protein	NA	NA	NA	NA
WP_001034083.1\|429899_433787_+\|protease	serine protease autotransporter toxin Sat	Q9LA58	Enterobacterial_phage	1.2e-227	39.0
WP_001254932.1\|434383_435535_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
434186:434201	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1223654 : 1268932

Enterobacteria_phage(33.33%)

tRNA,transposase,integrase

attL 1224016:1224030|attR 1246465:1246479

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001070187.1\|1223654_1224344_+\|tRNA	tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	NA	NA	NA	NA
1224016:1224030	attL	NA	NA	NA	NA
WP_000678399.1\|1224349_1226431_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_000468836.1\|1226464_1227670_-	sodium/glutamate symporter	NA	NA	NA	NA
WP_001295238.1\|1227949_1229341_+	xanthine/proton symporter XanP	H9YQ34	environmental_Halophage	1.4e-71	100.0
WP_001551854.1\|1229461_1231171_+	AsmA family protein	NA	NA	NA	NA
WP_001551856.1\|1231213_1231894_-	D-lyxose/D-mannose family sugar isomerase	NA	NA	NA	NA
WP_001551858.1\|1231874_1232807_-	ROK family protein	NA	NA	NA	NA
WP_142767532.1\|1232854_1233715_-	ketose-bisphosphate aldolase	NA	NA	NA	NA
WP_000457123.1\|1233795_1234647_-	class II fructose-bisphosphate aldolase family protein	NA	NA	NA	NA
WP_000662199.1\|1234658_1235750_-	PTS fructose transporter subunit IIC	NA	NA	NA	NA
WP_001028074.1\|1235774_1236089_-	PTS fructose transporter subunit IIB	NA	NA	NA	NA
WP_001521621.1\|1236106_1236577_-	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_001177975.1\|1236603_1238157_-	PRD domain-containing protein	NA	NA	NA	NA
WP_071591541.1\|1238242_1238440_-	hypothetical protein	NA	NA	NA	NA
WP_001551861.1\|1238451_1240770_-	alpha-xylosidase	NA	NA	NA	NA
WP_001551865.1\|1240779_1242162_-	glycoside-pentoside-hexuronide family transporter	NA	NA	NA	NA
WP_001218900.1\|1242848_1244033_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.6e-162	69.9
WP_001551866.1\|1244444_1245488_+	hypothetical protein	NA	NA	NA	NA
WP_072254179.1\|1246370_1246565_-	hypothetical protein	NA	NA	NA	NA
1246465:1246479	attR	NA	NA	NA	NA
WP_141119348.1\|1246515_1246713_-	hypothetical protein	NA	NA	NA	NA
WP_001551868.1\|1246841_1248575_-	hypothetical protein	NA	NA	NA	NA
WP_077697982.1\|1250660_1252262_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	1.4e-78	36.2
WP_032233146.1\|1253366_1253861_-	Dr family adhesin structural subunit	NA	NA	NA	NA
WP_032233147.1\|1254066_1254240_-	hypothetical protein	NA	NA	NA	NA
WP_042194850.1\|1254635_1255079_-	adhesin	NA	NA	NA	NA
WP_042194852.1\|1255094_1257677_-	Dr fimbrial biogenesis usher DraC	NA	NA	NA	NA
WP_114079256.1\|1257716_1258409_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_001209230.1\|1258813_1259119_-	hypothetical protein	NA	NA	NA	NA
WP_032147691.1\|1260814_1261042_+	F1845 fimbrial adhesin operon transcriptional regulator DaaF	NA	NA	NA	NA
WP_142767533.1\|1261304_1262123_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	2.9e-48	47.2
WP_000544830.1\|1262155_1262953_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	1.9e-145	99.6
WP_000952372.1\|1262952_1264125_-\|transposase	IS21-like element IS21 family transposase	U5N3F9	Enterobacteria_phage	3.5e-228	99.5
WP_001551873.1\|1264211_1265543_-	phosphoethanolamine transferase	NA	NA	NA	NA
WP_032147602.1\|1266316_1266994_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	2.5e-21	46.0
WP_000624622.1\|1266993_1267341_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
WP_000381395.1\|1267360_1268932_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7

DBSCAN-SWA_4

2185046 : 2228091

Escherichia_phage(63.64%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001519307.1\|2185046_2186027_-\|transposase	transposase	H6WZJ9	Escherichia_phage	6.1e-101	57.2
WP_001519308.1\|2186091_2187198_-	N-acetylneuraminate epimerase	NA	NA	NA	NA
WP_001519309.1\|2187217_2187934_-	N-acetylneuraminic acid outer membrane channel NanC	NA	NA	NA	NA
WP_001564306.1\|2189397_2190000_+	type 1 fimbria regulatory protein FimB	A0A2L1IV36	Escherichia_phage	1.3e-53	51.3
WP_000044708.1\|2190477_2191074_+	type 1 fimbria regulatory protein FimE	A0A2L1IV36	Escherichia_phage	3.9e-50	53.4
WP_001357506.1\|2191554_2192103_+	metal ABC transporter substrate-binding lipoprotein/fibrin-binding adhesin FimA	NA	NA	NA	NA
WP_000824099.1\|2192167_2192707_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_000066559.1\|2192743_2193469_+	type 1 fimbria chaperone FimC	NA	NA	NA	NA
WP_000120954.1\|2193534_2196171_+	fimbrial biogenesis usher protein FimD	NA	NA	NA	NA
WP_001244821.1\|2196180_2196711_+	type 1 fimbria minor subunit FimF	NA	NA	NA	NA
WP_000870577.1\|2196723_2197227_+	type 1 fimbria minor subunit FimG	NA	NA	NA	NA
WP_000832236.1\|2197246_2198149_+	type 1 fimbria D-mannose specific adhesin FimH	NA	NA	NA	NA
WP_001519311.1\|2198390_2199734_-	gluconate permease GntP	NA	NA	NA	NA
WP_000438582.1\|2200073_2201258_+	mannonate dehydratase	NA	NA	NA	NA
WP_000208180.1\|2201338_2202799_+	fructuronate reductase	H8ZJP8	Ostreococcus_tauri_virus	1.6e-49	32.2
WP_000833684.1\|2203013_2203787_+	Uxu operon transcriptional regulator	NA	NA	NA	NA
WP_001298053.1\|2204200_2204584_+	anti-adapter protein IraD	NA	NA	NA	NA
WP_001677288.1\|2205009_2205921_-	hypochlorite stress DNA-binding transcriptional regulator HypT	NA	NA	NA	NA
WP_001534825.1\|2205985_2207158_-	beta-aspartyl-peptidase	NA	NA	NA	NA
WP_000211971.1\|2207170_2207632_-	hypothetical protein	NA	NA	NA	NA
WP_001298014.1\|2207628_2208312_-	YjiH family protein	NA	NA	NA	NA
WP_001151839.1\|2208561_2209116_+	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	4.6e-37	45.6
WP_001534830.1\|2209128_2210307_-	MFS transporter	NA	NA	NA	NA
WP_001300028.1\|2210374_2211235_-	YjiK family protein	NA	NA	NA	NA
WP_000666413.1\|2211299_2211557_-	DUF3343 domain-containing protein	NA	NA	NA	NA
WP_001297641.1\|2211553_2212321_-	hypothetical protein	NA	NA	NA	NA
WP_001551998.1\|2212330_2213482_-	2-hydroxyacyl-CoA dehydratase subunit D	NA	NA	NA	NA
WP_001067855.1\|2213550_2214255_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_011152976.1\|2214822_2215482_-	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	4.2e-130	99.1
WP_001067855.1\|2215688_2216393_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000113282.1\|2216404_2217061_-	tetracycline resistance transcriptional repressor TetR(D)	NA	NA	NA	NA
WP_001039466.1\|2217156_2218341_+	tetracycline efflux MFS transporter Tet(D)	NA	NA	NA	NA
WP_001550555.1\|2218435_2218726_+	alcohol dehydrogenase catalytic domain-containing protein	A0A0K0KVL7	Prochlorococcus_phage	5.2e-08	41.8
WP_000027057.1\|2218820_2219681_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001067855.1\|2220172_2220877_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_142767537.1\|2221440_2221968_-	hypothetical protein	NA	NA	NA	NA
WP_001446887.1\|2222074_2222812_+	recombinase family protein	NA	NA	NA	NA
WP_000743213.1\|2222808_2223033_+	hypothetical protein	NA	NA	NA	NA
WP_001120888.1\|2223243_2224737_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001445143.1\|2224767_2225019_+	hypothetical protein	NA	NA	NA	NA
WP_000251875.1\|2224912_2225215_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_001043260.1\|2225301_2226117_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_000427619.1\|2227086_2228091_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

2501398 : 2574438

Emiliania_huxleyi_virus(11.11%)

tRNA,protease,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001520521.1\|2501398_2502751_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_001240896.1\|2502780_2505213_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_000758956.1\|2505334_2505820_+	molecular chaperone Skp	NA	NA	NA	NA
WP_001139287.1\|2505823_2506849_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_000210739.1\|2506953_2507409_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_000565966.1\|2507412_2508201_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_001550626.1\|2508200_2509349_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_001550627.1\|2509345_2509942_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	7.9e-27	40.0
WP_001294781.1\|2509978_2513461_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	2.2e-209	37.0
WP_000055748.1\|2513473_2514433_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_142767541.1\|2514530_2516672_+	lysine decarboxylase LdcC	NA	NA	NA	NA
WP_000901098.1\|2516728_2517118_+	VOC family protein	NA	NA	NA	NA
WP_001550628.1\|2517182_2518481_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_000062311.1\|2518529_2518790_-	Rho-binding antiterminator	NA	NA	NA	NA
WP_000417058.1\|2518776_2518977_-	YaeP family protein	NA	NA	NA	NA
WP_001185287.1\|2519142_2519688_+	YaeQ family protein	NA	NA	NA	NA
WP_000635534.1\|2519684_2520107_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_000239188.1\|2520120_2520831_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA
WP_001550629.1\|2520861_2521686_-	YaeF family permuted papain-like enzyme	NA	NA	NA	NA
WP_001260708.1\|2521738_2523457_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_000094022.1\|2523567_2524275_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_001202329.1\|2524271_2524676_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
WP_000874224.1\|2524793_2525609_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA
WP_001294600.1\|2525648_2526302_-	methionine ABC transporter permease MetI	NA	NA	NA	NA
WP_000593994.1\|2526294_2527326_-	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	7.2e-36	40.2
WP_001140178.1\|2527512_2528085_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_000997053.1\|2533844_2534648_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	5.4e-39	36.2
WP_000648583.1\|2534644_2535559_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001230983.1\|2535799_2536600_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_001550637.1\|2536677_2537448_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000644685.1\|2537494_2538853_-	murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
WP_001052732.1\|2538924_2539680_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_001308373.1\|2539713_2540436_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000917883.1\|2540432_2540900_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
WP_001308374.1\|2540964_2541696_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	7.6e-40	38.6
WP_001086163.1\|2542234_2543020_+	hypothetical protein	NA	NA	NA	NA
WP_001236629.1\|2543168_2543636_-	hypothetical protein	NA	NA	NA	NA
WP_000908071.1\|2543645_2544560_-	hypothetical protein	NA	NA	NA	NA
WP_000002621.1\|2544603_2545086_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_001563736.1\|2545109_2546462_-	type VI secretion system protein VasL	NA	NA	NA	NA
WP_122989438.1\|2546472_2549907_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_001240537.1\|2550015_2551428_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_001550641.1\|2551432_2552176_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_089503205.1\|2552172_2555022_-	AAA domain-containing protein	A0A1C3S747	Escherichia_phage	8.5e-79	29.7
WP_001521863.1\|2555030_2555792_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_000246418.1\|2555796_2557128_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_001080149.1\|2557130_2557655_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_001550643.1\|2557651_2558932_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_000348804.1\|2558956_2560039_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_001521865.1\|2560002_2561853_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_001521866.1\|2561856_2562270_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_001550644.1\|2562276_2563752_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_001521869.1\|2563802_2564027_-	hypothetical protein	NA	NA	NA	NA
WP_001550646.1\|2564061_2564562_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_001142958.1\|2565258_2565777_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_001550647.1\|2565986_2568128_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.8e-25	24.8
WP_001077735.1\|2572703_2573081_+	hypothetical protein	NA	NA	NA	NA
WP_024192499.1\|2573301_2574438_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

3506337 : 3581671

Enterobacteria_phage(36.67%)

terminase,head,portal,tRNA,capsid,lysis,integrase,tail,transposase,holin

attL 3569750:3569809|attR 3587669:3589025

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000074984.1\|3506337_3507456_-\|integrase	tyrosine-type recombinase/integrase	Q77Z04	Phage_21	5.9e-84	44.2
WP_000003742.1\|3507424_3507694_-	excisionase	NA	NA	NA	NA
WP_000102136.1\|3507755_3510197_-	exonuclease	V5UQJ3	Shigella_phage	3.1e-114	46.9
WP_001070259.1\|3510290_3510482_-	DUF1482 family protein	NA	NA	NA	NA
WP_000854558.1\|3510478_3510667_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001517906.1\|3511067_3511271_+	hypothetical protein	NA	NA	NA	NA
WP_001171946.1\|3511235_3511454_-	hypothetical protein	NA	NA	NA	NA
WP_000379575.1\|3511613_3511769_-	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_001420344.1\|3512061_3512400_-	peptidase S24	H9C160	Pectobacterium_phage	2.5e-06	32.0
WP_000747951.1\|3512791_3513034_+	hypothetical protein	H9C161	Pectobacterium_phage	4.8e-07	55.8
WP_000693850.1\|3513017_3513443_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_001262390.1\|3513514_3514585_+	hypothetical protein	A0A088CD36	Shigella_phage	2.6e-52	56.6
WP_001151150.1\|3514625_3515048_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.6e-64	90.6
WP_000403785.1\|3515105_3515462_+	hypothetical protein	A0A2R2Z307	Escherichia_phage	1.8e-58	99.2
WP_001550964.1\|3515555_3515738_+	hypothetical protein	A0A2R2Z308	Escherichia_phage	2.4e-27	98.3
WP_000786213.1\|3516390_3516570_+	hypothetical protein	NA	NA	NA	NA
WP_000813254.1\|3516828_3516984_+	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_001112736.1\|3517025_3517205_-	hypothetical protein	NA	NA	NA	NA
WP_023141427.1\|3517151_3517424_+	hypothetical protein	I6PCV7	Cronobacter_phage	4.2e-12	50.8
WP_001550965.1\|3517425_3518484_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.7e-88	47.7
WP_000139998.1\|3518484_3518847_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	9.6e-36	63.6
WP_001545909.1\|3518861_3519683_+	antitermination protein	K7P7B9	Enterobacteria_phage	1.8e-77	58.6
WP_023143430.1\|3520216_3520543_+	hypothetical protein	NA	NA	NA	NA
WP_000562553.1\|3520578_3520710_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	3.7e-06	100.0
WP_001336019.1\|3520990_3521326_-	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	1.4e-44	75.7
WP_001550966.1\|3521586_3523548_+	SASA family carbohydrate esterase	A0A0P0ZBH7	Stx2-converting_phage	5.6e-239	64.1
WP_023143432.1\|3523684_3523867_+	DUF1378 family protein	S5MBZ5	Escherichia_phage	5.1e-22	85.0
WP_001538590.1\|3523904_3524150_+	DUF826 domain-containing protein	S5MW40	Escherichia_phage	8.8e-17	92.6
WP_000284506.1\|3524226_3524442_+\|holin	holin	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_001037014.1\|3524446_3525337_+	YdfR family protein	Q08JA0	Stx2-converting_phage	2.1e-108	70.9
WP_001092866.1\|3525373_3525907_+	lysozyme	Q6H9V6	Enterobacteria_phage	6.7e-102	97.2
WP_001322430.1\|3525849_3526065_-	hypothetical protein	Q8VNN9	Enterobacteria_phage	1.1e-23	90.2
WP_001446668.1\|3526063_3526246_+	hypothetical protein	NA	NA	NA	NA
WP_001280932.1\|3526260_3526392_+	hypothetical protein	A0A0P0ZG36	Escherichia_phage	2.6e-07	79.1
WP_032142285.1\|3526394_3526862_+\|lysis	lysis protein	Q6H9V3	Enterobacteria_phage	6.7e-66	84.4
WP_000830178.1\|3527172_3527499_+	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_001322427.1\|3527621_3527975_-	hypothetical protein	NA	NA	NA	NA
WP_012602757.1\|3527862_3528183_-	hypothetical protein	NA	NA	NA	NA
WP_001327250.1\|3528286_3528469_-	hypothetical protein	NA	NA	NA	NA
WP_000235436.1\|3528457_3528967_+\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_001551252.1\|3528938_3530867_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	9.4e-263	66.5
WP_001551250.1\|3530850_3531057_+\|head	head-stabilizing protein	K7PM10	Enterobacteria_phage	3.9e-10	55.4
WP_001537684.1\|3531053_3532646_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.9e-185	61.3
WP_001253953.1\|3532635_3534141_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.7e-100	53.5
WP_000256835.1\|3534177_3534525_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.9e-21	55.9
WP_000522583.1\|3534582_3535611_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	8.6e-114	61.9
WP_000201498.1\|3535662_3536046_+	hypothetical protein	NA	NA	NA	NA
WP_001204571.1\|3536038_3536392_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.1e-41	70.1
WP_000974995.1\|3536407_3536941_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.2e-55	64.1
WP_000683079.1\|3536937_3537333_+\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_000235037.1\|3537340_3538087_+\|tail	phage tail protein	Q687F6	Enterobacteria_phage	8.7e-124	93.4
WP_001299690.1\|3538105_3538537_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.4e-41	67.4
WP_000533402.1\|3538563_3538977_+\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_142767546.1\|3538957_3541519_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	89.9
WP_000847298.1\|3541515_3541845_+\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_001550635.1\|3541844_3542543_+\|tail	phage minor tail protein L	Q6H9T5	Enterobacteria_phage	2.2e-129	97.0
WP_001576728.1\|3542548_3543292_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	8.3e-143	93.4
WP_072258937.1\|3543237_3543870_+\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	1.7e-96	92.3
WP_000559722.1\|3543891_3544233_+	hypothetical protein	NA	NA	NA	NA
WP_021519674.1\|3544213_3547906_+	DUF1983 domain-containing protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	85.9
WP_001228261.1\|3547973_3548573_+	Ail/Lom family protein	Q9EV15	Enterobacteria_phage	4.4e-102	92.5
WP_000216560.1\|3548724_3550788_+\|tail	phage tail protein	A0A1X7QGG5	Escherichia_phage	3.7e-148	62.7
WP_001204582.1\|3550784_3551063_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	1.0e-21	50.5
WP_000355700.1\|3551072_3551366_+	hypothetical protein	NA	NA	NA	NA
WP_071586406.1\|3551405_3551504_+\|tail	phage tail protein	K7PMH7	Enterobacteria_phage	1.2e-06	78.1
WP_001309429.1\|3551476_3551614_+	hypothetical protein	NA	NA	NA	NA
WP_001550976.1\|3551558_3552215_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000937496.1\|3552283_3552550_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.3e-18	78.3
WP_000799406.1\|3552781_3553645_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
WP_000531594.1\|3553628_3554765_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	5.5e-29	39.8
WP_000359446.1\|3555014_3556241_+	peptidase T	NA	NA	NA	NA
WP_001295435.1\|3556289_3557411_-	cupin domain-containing protein	NA	NA	NA	NA
WP_000735412.1\|3557486_3558947_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_001265481.1\|3558946_3559618_-	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000423742.1\|3559786_3561157_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	44.9
WP_001297479.1\|3561160_3561802_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_001295972.1\|3561837_3562944_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476103.1\|3562997_3563459_-	phosphatase NudJ	NA	NA	NA	NA
WP_000873387.1\|3563468_3564107_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000246191.1\|3564439_3564775_-	DUF1493 family protein	NA	NA	NA	NA
WP_000381622.1\|3564774_3565224_-	hypothetical protein	NA	NA	NA	NA
WP_001522898.1\|3565805_3567056_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	6.5e-23	98.1
WP_000526135.1\|3567251_3567710_+\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	2.9e-13	32.3
WP_142767566.1\|3567867_3568131_-	anti-adapter protein IraM	Q20GJ2	Phage_258-320	6.3e-29	57.5
3569750:3569809	attL	NA	NA	NA	NA
WP_000427619.1\|3570018_3571023_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_001138064.1\|3571101_3574068_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
WP_000147567.1\|3574070_3574631_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_000454193.1\|3574756_3575107_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845048.1\|3575309_3576323_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_000703418.1\|3576480_3576954_+	trimethoprim-resistant dihydrofolate reductase DfrA7	A0A1B2IBQ4	Erwinia_phage	8.4e-16	32.0
WP_000679427.1\|3577183_3577531_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|3577524_3578364_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_001993321.1\|3578293_3578473_-	hypothetical protein	NA	NA	NA	NA
WP_000376623.1\|3578491_3578992_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001381192.1\|3578960_3579953_-	AAA family ATPase	NA	NA	NA	NA
WP_000935451.1\|3579955_3581671_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
3587669:3589025	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3781221 : 3887765

103

Escherichia_phage(46.43%)

terminase,tRNA,lysis,integrase,tail,transposase

attL 3772117:3772132|attR 3814606:3814621

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3772117:3772132	attL	NA	NA	NA	NA
WP_001314661.1\|3781221_3782454_-	diguanylate cyclase DgcM	A0A127AWB9	Bacillus_phage	3.1e-17	39.5
WP_000387388.1\|3782708_3783692_+	zinc transporter ZntB	NA	NA	NA	NA
WP_001551034.1\|3784169_3785543_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
WP_000662472.1\|3785671_3786607_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.7e-145	98.4
WP_001551035.1\|3786658_3787894_-\|integrase	site-specific integrase	A0A0U2JGI6	Escherichia_phage	1.3e-238	98.5
WP_000079604.1\|3787895_3788111_-	excisionase XisR	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
WP_001551036.1\|3788210_3788399_-	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	7.9e-26	95.2
WP_001317028.1\|3788391_3788586_-	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	A0A0U2QQP4	Escherichia_phage	5.8e-32	96.9
WP_001551037.1\|3788642_3789452_-	recombination protein RecT	A0A1P8DTF2	Proteus_phage	4.4e-105	71.1
WP_001551038.1\|3789444_3792096_-	exodeoxyribonuclease VIII	A0A0U2I1R6	Escherichia_phage	0.0e+00	77.6
WP_001314664.1\|3792197_3792473_-	hypothetical protein	A0A0U2QW85	Escherichia_phage	1.3e-40	93.4
WP_001551041.1\|3792547_3792718_-	phage protein	A0A0U2SHB5	Escherichia_phage	9.7e-23	89.3
WP_000560221.1\|3792717_3792939_-	killing protein KilR	A0A0U2RTC4	Escherichia_phage	3.1e-37	98.6
WP_001551042.1\|3793359_3793512_-	DUF1391 family protein	M4QQ57	Salicola_phage	6.0e-08	55.3
WP_001551043.1\|3793965_3794442_-	DNA-binding transcriptional repressor RacR	NA	NA	NA	NA
WP_001551044.1\|3794565_3794862_+	toxin YdaS	A0A0R6PH31	Moraxella_phage	1.6e-09	43.5
WP_001551045.1\|3794884_3795307_+	phage protein	A0A0U2RXZ9	Escherichia_phage	5.3e-70	95.7
WP_001551046.1\|3795319_3796177_+	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	3.5e-68	82.6
WP_001551047.1\|3796183_3796930_+	ATP-binding protein	V5UQI5	Shigella_phage	2.4e-110	78.5
WP_001551048.1\|3796952_3797714_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	2.3e-119	93.3
WP_001403739.1\|3797729_3798161_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.4e-64	92.7
WP_001551049.1\|3798157_3798379_+	hypothetical protein	NA	NA	NA	NA
WP_000385105.1\|3798354_3799509_+	AAA family ATPase	A0A2H4UTU5	Bodo_saltans_virus	1.9e-13	31.3
WP_001551050.1\|3799483_3801748_+	S8 family peptidase	NA	NA	NA	NA
WP_000940316.1\|3802161_3802761_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	1.6e-107	93.0
WP_001551052.1\|3802760_3803051_+	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	9.0e-45	85.4
WP_000640136.1\|3803047_3803590_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.4e-75	74.0
WP_000839599.1\|3804871_3805087_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	2.0e-33	98.6
WP_001551053.1\|3805086_3805584_+	lysozyme	A0A1B5FP97	Escherichia_phage	1.4e-90	97.6
WP_001228688.1\|3805800_3805986_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	3.6e-15	96.5
WP_001097895.1\|3806182_3807640_+	Trk system potassium uptake protein TrkG	NA	NA	NA	NA
WP_001291094.1\|3807777_3808569_+	ParB N-terminal domain-containing protein	R4TG31	Halovirus	2.8e-48	40.2
WP_001204037.1\|3808561_3809494_+	hypothetical protein	A0A1B1INP7	uncultured_Mediterranean_phage	1.4e-83	54.9
WP_000126788.1\|3809471_3809681_+	hypothetical protein	NA	NA	NA	NA
WP_142767548.1\|3809684_3810779_+\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	5.0e-112	79.8
WP_000625348.1\|3810759_3812061_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.6e-149	59.6
WP_001551056.1\|3812063_3813470_+	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	2.3e-186	69.2
WP_001363932.1\|3813453_3814566_+	hypothetical protein	I6PD76	Cronobacter_phage	7.1e-114	54.5
WP_001551057.1\|3814670_3815435_+	hypothetical protein	G8C7P6	Escherichia_phage	1.8e-79	61.4
3814606:3814621	attR	NA	NA	NA	NA
WP_000918487.1\|3815533_3816673_+	hypothetical protein	G8C7P7	Escherichia_phage	7.4e-159	75.0
WP_000634214.1\|3816895_3817291_+	hypothetical protein	NA	NA	NA	NA
WP_001551058.1\|3817290_3817674_+	hypothetical protein	A0A0P0I456	Acinetobacter_phage	2.2e-14	39.4
WP_001551059.1\|3817674_3818055_+	hypothetical protein	A0A059VF88	Pseudomonas_phage	2.9e-19	44.4
WP_000673077.1\|3818051_3818444_+	hypothetical protein	NA	NA	NA	NA
WP_001551060.1\|3818470_3819433_+	hypothetical protein	A0A059VG08	Pseudomonas_phage	3.8e-55	38.6
WP_122452218.1\|3819583_3819943_+	hypothetical protein	NA	NA	NA	NA
WP_032284309.1\|3820050_3820251_+	hypothetical protein	NA	NA	NA	NA
WP_001551061.1\|3820414_3822913_+\|tail	lambda family phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	1.7e-86	35.1
WP_077634177.1\|3822916_3823648_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	5.4e-54	48.2
WP_000024051.1\|3823640_3823979_+\|tail	phage tail protein	H6WZM2	Escherichia_phage	4.0e-28	50.0
WP_001152425.1\|3823978_3824677_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	1.9e-128	95.3
WP_032147653.1\|3824682_3825426_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.8e-146	96.3
WP_050436738.1\|3825362_3825971_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	7.1e-100	91.6
WP_001551065.1\|3826031_3829511_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	89.5
WP_001228337.1\|3829578_3830178_+	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	1.7e-101	91.5
WP_142767549.1\|3830242_3832618_+\|tail	phage tail protein	A0A1X7QGG5	Escherichia_phage	1.4e-167	69.3
WP_000654143.1\|3832617_3832899_+	hypothetical protein	A0A1X7QHA1	Escherichia_phage	1.6e-17	47.8
WP_001551067.1\|3832908_3833949_+\|tail	tail fiber domain-containing protein	A0A0E3M4A9	Enterobacteria_phage	4.9e-125	67.6
WP_000355602.1\|3833991_3834285_+	hypothetical protein	NA	NA	NA	NA
WP_000968130.1\|3834636_3835494_-	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA
WP_001101728.1\|3835490_3836348_-	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA
WP_000983720.1\|3836344_3837172_-	iron/manganese ABC transporter ATP-binding protein SitB	M1HV27	Acanthocystis_turfacea_Chlorella_virus	8.7e-08	28.0
WP_000286867.1\|3837171_3838086_-	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA
WP_001295593.1\|3838672_3839107_-	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	1.4e-28	52.8
WP_000837902.1\|3839247_3840381_-	porin OmpN	Q1MVN1	Enterobacteria_phage	4.8e-118	58.8
WP_001551068.1\|3840742_3844267_-	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
WP_001295715.1\|3844540_3844807_+	DUF333 domain-containing protein	NA	NA	NA	NA
WP_001523197.1\|3844803_3845226_-	heat shock protein HslJ	NA	NA	NA	NA
WP_000762229.1\|3845336_3846326_-	D-lactate dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	2.5e-70	44.0
WP_001551069.1\|3846533_3849173_+	YdbH family protein	NA	NA	NA	NA
WP_000698145.1\|3849169_3849355_+	YnbE family lipoprotein	NA	NA	NA	NA
WP_001306533.1\|3849362_3849689_+	YdbL family protein	NA	NA	NA	NA
WP_001067519.1\|3849860_3850766_-	transcriptional regulator FeaR	NA	NA	NA	NA
WP_001551070.1\|3851001_3852501_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_000535436.1\|3852559_3854833_-	primary-amine oxidase	NA	NA	NA	NA
WP_001551071.1\|3855080_3857126_-	phenylacetic acid degradation bifunctional protein PaaZ	NA	NA	NA	NA
WP_071591516.1\|3857374_3858340_+	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA
WP_000073393.1\|3858351_3858639_+	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA
WP_001551072.1\|3858647_3859394_+	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA
WP_001189203.1\|3859408_3859906_+	phenylacetate degradation protein PaaD	NA	NA	NA	NA
WP_001551073.1\|3859913_3860984_+	phenylacetate-CoA oxygenase/reductase subunit PaaK	NA	NA	NA	NA
WP_001551074.1\|3860980_3861748_+	2,3-dehydroadipyl-CoA hydratase	NA	NA	NA	NA
WP_001551075.1\|3861747_3862536_+	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
WP_019842675.1\|3862537_3863962_+	3-hydroxyacyl-CoA dehydrogenase PaaC	NA	NA	NA	NA
WP_001551077.1\|3863954_3864377_+	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA
WP_001206190.1\|3864376_3865582_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_000632281.1\|3865608_3866922_+	phenylacetate--CoA ligase	NA	NA	NA	NA
WP_001551078.1\|3867022_3867973_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA
WP_001551079.1\|3867954_3868545_+	phenylacetic acid degradation protein PaaY	NA	NA	NA	NA
WP_001551080.1\|3868875_3873897_+	autotransporter domain-containing protein	NA	NA	NA	NA
WP_001563833.1\|3874104_3874965_+	pyridoxine 4-dehydrogenase	NA	NA	NA	NA
WP_000048949.1\|3875078_3875684_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_001551082.1\|3875884_3879787_+	ATP-dependent RNA helicase HrpA	A0A1V0SIV3	Klosneuvirus	7.6e-54	29.7
WP_001523214.1\|3880071_3880410_+	hypothetical protein	NA	NA	NA	NA
WP_001314706.1\|3880396_3880846_+	hypothetical protein	NA	NA	NA	NA
WP_000343026.1\|3880965_3881343_+	hypothetical protein	NA	NA	NA	NA
WP_001027956.1\|3881458_3882259_+	YdcF family protein	NA	NA	NA	NA
WP_000115969.1\|3882455_3883895_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_000048646.1\|3883936_3884938_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_001306523.1\|3885126_3885657_+	cytochrome b561	A0A0U2QLA7	Escherichia_phage	2.0e-18	43.9
WP_000731833.1\|3885901_3886075_+	periplasmic protein	A0A0R6PKG1	Moraxella_phage	4.4e-07	67.4
WP_001309484.1\|3886146_3886296_-	type I toxin-antitoxin system toxin HokB	NA	NA	NA	NA
WP_085948682.1\|3886395_3887765_-\|transposase	IS3-like element IS150 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	4.8e-112	99.5

DBSCAN-SWA_8

4191618 : 4245342

Enterobacteria_phage(50.91%)

terminase,head,portal,tRNA,capsid,lysis,tail,integrase

attL 4198592:4198619|attR 4245367:4245394

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000672359.1\|4191618_4194006_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_001551178.1\|4194020_4195004_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	1.7e-34	37.4
WP_001386830.1\|4195142_4195187_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_000124850.1\|4195309_4195666_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_001124225.1\|4195719_4195917_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_001700733.1\|4196013_4196556_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	6.3e-15	32.9
WP_001144202.1\|4196559_4198488_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	9.4e-130	37.3
4198592:4198619	attL	NA	NA	NA	NA
WP_000877736.1\|4199226_4200969_+	hypothetical protein	NA	NA	NA	NA
WP_001551179.1\|4201450_4201744_-	hypothetical protein	NA	NA	NA	NA
WP_016247637.1\|4201786_4202827_-\|tail	tail fiber domain-containing protein	A0A0E3M4A9	Enterobacteria_phage	3.0e-122	66.1
WP_001518417.1\|4202836_4203118_-	hypothetical protein	A0A1X7QHA1	Escherichia_phage	1.4e-18	50.0
WP_016238726.1\|4203117_4205493_-\|tail	phage tail fiber protein	A0A1X7QGG5	Escherichia_phage	1.4e-167	69.3
WP_001551182.1\|4205557_4206157_-	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	1.0e-98	88.9
WP_001551184.1\|4206224_4209623_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	89.8
WP_000090872.1\|4209683_4210316_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	1.2e-94	97.1
WP_019843054.1\|4210252_4210996_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.2e-149	98.4
WP_001551186.1\|4211001_4211700_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	8.9e-131	97.4
WP_000847339.1\|4211699_4212029_-\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	2.8e-58	97.2
WP_001551188.1\|4212025_4214587_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	98.5
WP_000459467.1\|4214579_4215014_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	7.6e-64	99.2
WP_000479143.1\|4214995_4215418_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	8.2e-71	96.4
WP_001445656.1\|4215433_4216174_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	4.7e-130	97.6
WP_000683105.1\|4216181_4216577_-\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	1.0e-70	100.0
WP_000985116.1\|4216573_4217152_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	7.8e-80	97.9
WP_000752996.1\|4217163_4217517_-\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	1.5e-62	99.1
WP_000158895.1\|4217528_4217924_-	hypothetical protein	A0A2R9YJP4	Escherichia_phage	4.5e-55	93.2
WP_001551189.1\|4217965_4218991_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	7.6e-187	96.8
WP_001299443.1\|4219045_4219378_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.7e-55	100.0
WP_000123230.1\|4219387_4220707_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	6.9e-233	98.2
WP_001551191.1\|4220687_4222289_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	2.7e-308	98.5
WP_000198149.1\|4222285_4222492_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001027295.1\|4222488_4224414_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.7
WP_000453587.1\|4224388_4224934_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	1.4e-94	98.9
WP_000738421.1\|4225602_4225896_+	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	5.9e-44	90.7
WP_001228695.1\|4225986_4226169_-\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_001135296.1\|4226385_4226883_-	lysozyme	M1FJA0	Enterobacteria_phage	1.6e-89	97.0
WP_000839582.1\|4226882_4227098_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	1.2e-33	98.6
WP_001146309.1\|4227286_4228018_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000592546.1\|4228369_4229329_-	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
WP_000780581.1\|4229521_4230046_+	lipocalin family protein	A0A1W6JNX6	Morganella_phage	1.1e-48	54.1
WP_001204777.1\|4230201_4230579_-	antitermination protein	Q777W5	Enterobacteria_phage	7.3e-55	84.2
WP_000971055.1\|4230664_4230805_-	YlcG family protein	K7PHH3	Enterobacteria_phage	1.1e-08	69.8
WP_000774488.1\|4231161_4231452_-	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	4.3e-47	94.8
WP_000224916.1\|4231444_4231615_-	hypothetical protein	K7P7K0	Enterobacteria_phage	1.5e-12	67.9
WP_001054342.1\|4231614_4232070_-	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	5.4e-60	66.9
WP_001303586.1\|4232066_4232168_-	hypothetical protein	NA	NA	NA	NA
WP_000881075.1\|4232284_4233082_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001445652.1\|4233091_4233643_-	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA
WP_001551199.1\|4234107_4235634_-	recombinase family protein	Q3HQV4	Burkholderia_phage	1.2e-31	31.1
WP_001299444.1\|4235691_4235841_-	hypothetical protein	NA	NA	NA	NA
WP_001070450.1\|4235888_4236221_-	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_000145915.1\|4236288_4236591_-	protein ren	A0A0N6WES4	Escherichia_phage	1.1e-42	95.7
WP_000788813.1\|4236587_4237289_-	hypothetical protein	M1FJ72	Enterobacteria_phage	3.8e-129	99.1
WP_001551200.1\|4237285_4238215_-	replication protein	A0A0M5M7Y1	Salmonella_phage	8.0e-111	64.1
WP_001182891.1\|4238301_4238841_-	hypothetical protein	K7PJT7	Enterobacteria_phage	6.8e-62	67.6
WP_001067458.1\|4238910_4239141_-	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
WP_000858975.1\|4239245_4239935_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.8e-92	75.0
WP_023148105.1\|4240446_4240737_+	hypothetical protein	K7P6H3	Enterobacteria_phage	5.0e-27	85.1
WP_000995443.1\|4240812_4241109_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	4.7e-49	99.0
WP_000100847.1\|4241114_4241900_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000186804.1\|4241896_4242577_+	YqaJ viral recombinase family protein	A0A0N6WET1	Escherichia_phage	1.3e-131	98.7
WP_000682318.1\|4242573_4242756_+	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	1.3e-28	98.3
WP_000548531.1\|4242728_4242920_+	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
WP_001386642.1\|4242930_4243212_+	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
WP_000763364.1\|4243310_4243529_+	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	1.8e-34	95.8
WP_000488401.1\|4243576_4243855_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	1.4e-47	96.7
WP_001354056.1\|4243945_4244176_+	hypothetical protein	A0A1P8DTG1	Proteus_phage	2.9e-14	55.7
WP_001196928.1\|4244133_4245342_-\|integrase	site-specific integrase	I6R9B6	Salmonella_phage	4.7e-180	74.9
4245367:4245394	attR	NA	NA	NA	NA

DBSCAN-SWA_9

4353411 : 4446081

113

Enterobacteria_phage(46.27%)

terminase,head,portal,tRNA,protease,capsid,lysis,tail,integrase,transposase,holin

attL 4400876:4400891|attR 4455137:4455152

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000984517.1\|4353411_4354293_-\|protease	protease HtpX	NA	NA	NA	NA
WP_001055785.1\|4354484_4356533_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	6.8e-86	33.5
WP_000431370.1\|4356552_4357251_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_001043876.1\|4357347_4357845_-	GAF domain-containing protein	NA	NA	NA	NA
WP_001316436.1\|4357974_4359258_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_001306757.1\|4359226_4361860_+	lipid-binding membrane homeostasis protein YebT	NA	NA	NA	NA
WP_024186439.1\|4361939_4363379_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_001295499.1\|4363496_4363733_+	DUF1480 family protein	NA	NA	NA	NA
WP_001296140.1\|4363837_4364029_+	YebW family protein	NA	NA	NA	NA
WP_001551231.1\|4364029_4364686_-	protein-serine/threonine phosphatase	A0A2D1GLI5	Escherichia_phage	1.2e-55	49.1
WP_000976472.1\|4365081_4365423_-	YebY family protein	NA	NA	NA	NA
WP_001551232.1\|4365435_4366308_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_000168747.1\|4366311_4366686_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_000916763.1\|4366824_4367055_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.3e-14	61.8
WP_000011653.1\|4367156_4367813_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_000944256.1\|4367836_4368499_+	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	2.0e-07	41.6
WP_001551233.1\|4368495_4370556_-	oligopeptidase B	NA	NA	NA	NA
WP_000064873.1\|4370712_4371138_-\|transposase	IS200/IS605-like element ISEc46 family transposase	A0A1S5RHE3	Helicobacter_phage	8.9e-25	49.6
WP_001551234.1\|4371194_4372364_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A077SLN2	Escherichia_phage	1.7e-203	99.0
WP_000024733.1\|4372527_4373187_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_001295500.1\|4373513_4373870_-	protein YebF	NA	NA	NA	NA
WP_000257738.1\|4373936_4374227_-	DNA damage-inducible protein YebG	NA	NA	NA	NA
WP_001551236.1\|4374360_4375539_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_000800512.1\|4375593_4376235_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_001069467.1\|4376271_4378083_-	phosphogluconate dehydratase	NA	NA	NA	NA
WP_000301727.1\|4378317_4379793_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	4.4e-79	37.5
WP_001056694.1\|4380130_4381000_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_000091148.1\|4381127_4382570_+	pyruvate kinase	NA	NA	NA	NA
WP_001551238.1\|4382701_4383673_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_001184045.1\|4383792_4385115_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.2e-14	40.9
WP_011076428.1\|4385130_4386063_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_000202996.1\|4386141_4386897_+	zinc ABC transporter ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	1.3e-18	28.3
WP_000571479.1\|4386893_4387679_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_000568522.1\|4387828_4388839_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.6e-09	25.5
WP_000580323.1\|4388847_4389459_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_010723105.1\|4389597_4389663_-	hypothetical protein	NA	NA	NA	NA
WP_001024929.1\|4389733_4390336_+	YebB family permuted papain-like enzyme	NA	NA	NA	NA
WP_001551239.1\|4390337_4390859_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
WP_000907234.1\|4390893_4391634_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001308712.1\|4391662_4392115_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_001551240.1\|4392232_4394005_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_001551241.1\|4394314_4394881_+	hydrolase	NA	NA	NA	NA
WP_001300214.1\|4394962_4395079_-	hypothetical protein	NA	NA	NA	NA
WP_001217553.1\|4395235_4395484_+	DinI family protein	K7PLW4	Enterobacteria_phage	1.8e-38	100.0
WP_001300215.1\|4395480_4395627_-	hypothetical protein	NA	NA	NA	NA
WP_000355701.1\|4395738_4396032_-	hypothetical protein	NA	NA	NA	NA
WP_001204581.1\|4396041_4396320_-	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	6.0e-22	50.5
WP_001551243.1\|4396316_4398383_-\|tail	phage tail fiber protein	A0A1X7QGG5	Escherichia_phage	2.4e-147	62.5
WP_001513563.1\|4398447_4399047_-	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	1.8e-108	96.5
WP_115189916.1\|4399114_4402807_-	DUF1983 domain-containing protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	85.4
4400876:4400891	attL	NA	NA	NA	NA
WP_024194397.1\|4402787_4403129_-	hypothetical protein	NA	NA	NA	NA
WP_117004347.1\|4403150_4403783_-\|tail	tail assembly protein	A0A0P0ZC16	Stx2-converting_phage	3.8e-96	92.3
WP_000194711.1\|4403728_4404472_-\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	7.7e-149	98.4
WP_001348269.1\|4404482_4405181_-\|tail	phage minor tail protein L	H6WZM3	Escherichia_phage	1.1e-128	96.6
WP_000847298.1\|4405180_4405510_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_001550972.1\|4405506_4408080_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	80.0
WP_000533402.1\|4408060_4408474_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_001299690.1\|4408500_4408932_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.4e-41	67.4
WP_000235037.1\|4408950_4409697_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	8.7e-124	93.4
WP_000683079.1\|4409704_4410100_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_001565313.1\|4410096_4410672_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.2e-48	56.8
WP_001204533.1\|4410687_4411041_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.9e-41	70.1
WP_001565314.1\|4411033_4411417_-	hypothetical protein	NA	NA	NA	NA
WP_016238735.1\|4411468_4412497_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.1e-113	61.9
WP_016247652.1\|4412554_4412902_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	3.7e-21	55.9
WP_016238736.1\|4412938_4414444_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	9.3e-101	53.8
WP_021524278.1\|4414433_4416026_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.8e-185	61.3
WP_000259002.1\|4416022_4416229_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
WP_001550967.1\|4416212_4418141_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	1.6e-262	66.4
WP_000235436.1\|4418112_4418622_-\|terminase	terminase	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_001329960.1\|4419437_4419623_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	3.2e-19	90.4
WP_000347013.1\|4419755_4419896_-	hypothetical protein	NA	NA	NA	NA
WP_001082539.1\|4420246_4420714_-\|lysis	lysis protein	Q9ZXB6	Enterobacteria_phage	9.1e-71	90.3
WP_000992072.1\|4421012_4421546_-	lysozyme	Q6H9V6	Enterobacteria_phage	2.4e-99	94.4
WP_000369850.1\|4421651_4421924_+	hypothetical protein	NA	NA	NA	NA
WP_000193278.1\|4421889_4422234_-	YdfR family protein	K7PGU6	Enterobacteria_phage	2.8e-37	95.2
WP_000284510.1\|4422238_4422454_-\|holin	holin	G9L6J5	Escherichia_phage	9.0e-34	100.0
WP_000874512.1\|4422604_4424458_-	SASA family carbohydrate esterase	Q08JA2	Stx2-converting_phage	0.0e+00	90.3
WP_000951233.1\|4424998_4425220_-	hypothetical protein	NA	NA	NA	NA
WP_077634182.1\|4425722_4426061_-	site-specific DNA-methyltransferase	A0A0N7KZF8	Stx2-converting_phage	2.1e-48	95.9
WP_000737259.1\|4426511_4427594_+	porin OmpC	Q1MVN1	Enterobacteria_phage	1.4e-162	78.7
WP_001204776.1\|4427781_4428165_-	antitermination protein QuuD	A0A088CD47	Shigella_phage	1.5e-55	83.3
WP_001065351.1\|4429224_4429482_-	hypothetical protein	Q8W639	Enterobacteria_phage	1.6e-21	70.1
WP_000203851.1\|4429478_4430879_-	replicative DNA helicase	Q8W640	Enterobacteria_phage	1.1e-244	92.0
WP_000988266.1\|4430875_4431775_-	ATP-binding protein	Q8W641	Enterobacteria_phage	2.3e-139	94.8
WP_001551255.1\|4431785_4432778_-	hypothetical protein	Q8W642	Enterobacteria_phage	5.1e-55	96.3
WP_000995578.1\|4432774_4433074_-	hypothetical protein	NA	NA	NA	NA
WP_000618007.1\|4433070_4433295_-	hypothetical protein	NA	NA	NA	NA
WP_000626793.1\|4433291_4433486_-	hypothetical protein	NA	NA	NA	NA
WP_001551256.1\|4433482_4434337_-	rha family phage regulatory protein	Q8HA97	Salmonella_phage	8.2e-102	69.0
WP_001551257.1\|4434445_4435153_-	hypothetical protein	Q8W645	Enterobacteria_phage	4.5e-106	85.5
WP_000177358.1\|4435149_4435377_-	hypothetical protein	Q8W647	Enterobacteria_phage	4.9e-30	91.0
WP_000838350.1\|4435488_4436145_+	helix-turn-helix domain-containing protein	Q8W648	Enterobacteria_phage	3.1e-125	98.2
WP_001551258.1\|4436248_4436752_+	helix-turn-helix domain-containing protein	Q8W649	Enterobacteria_phage	8.9e-64	95.5
WP_001551259.1\|4436639_4436900_-	hypothetical protein	NA	NA	NA	NA
WP_000141093.1\|4437039_4437246_+	hypothetical protein	Q8W651	Enterobacteria_phage	1.3e-29	94.1
WP_001551260.1\|4437440_4437623_+	hypothetical protein	Q8W652	Enterobacteria_phage	1.7e-09	50.9
WP_001551261.1\|4437628_4438210_+	hypothetical protein	Q8W653	Enterobacteria_phage	9.6e-70	64.5
WP_001551262.1\|4438220_4438469_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000179800.1\|4438458_4438776_+	DUF4752 family protein	A0A1I9LJV1	Stx_converting_phage	5.2e-38	82.6
WP_001300189.1\|4438729_4439044_+	hypothetical protein	B1GS43	Salmonella_phage	2.8e-39	86.0
WP_000034225.1\|4439030_4439717_+	ead/Ea22-like family protein	A5VWB1	Enterobacteria_phage	1.8e-38	68.2
WP_001290008.1\|4439713_4440250_+	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	1.6e-63	67.2
WP_000224229.1\|4440251_4440515_+	hypothetical protein	S4TNB5	Salmonella_phage	1.1e-30	71.3
WP_000208033.1\|4440525_4441038_+	hypothetical protein	A0A1U9AJ59	Stx1_converting_phage	2.2e-78	97.4
WP_000457723.1\|4441122_4441365_+	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	4.3e-32	87.5
WP_001030156.1\|4441368_4441515_+	hypothetical protein	A0A1B5FPC2	Escherichia_phage	1.6e-21	93.8
WP_000528718.1\|4441523_4441760_+	excisionase family protein	Q8W657	Enterobacteria_phage	6.4e-41	100.0
WP_000362005.1\|4441815_4443129_+\|integrase	site-specific integrase	Q8W658	Enterobacteria_phage	4.1e-246	95.6
WP_042196262.1\|4443110_4443881_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	5.7e-70	96.9
WP_000252980.1\|4443933_4444329_+	hypothetical protein	NA	NA	NA	NA
WP_000019591.1\|4444369_4445113_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
WP_000564730.1\|4445109_4446081_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
4455137:4455152	attR	NA	NA	NA	NA

DBSCAN-SWA_10

4644334 : 4652184

Shigella_phage(33.33%)

integrase,tail

attL 4641782:4641794|attR 4656453:4656465

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4641782:4641794	attL	NA	NA	NA	NA
WP_001421515.1\|4644334_4645501_-	serine-type D-Ala-D-Ala carboxypeptidase DacD	B6DZZ7	Stx2-converting_phage	6.1e-225	98.5
WP_001333292.1\|4645844_4645976_-	hypothetical protein	O64339	Escherichia_phage	1.8e-08	64.3
WP_000221969.1\|4646737_4647817_+	hypothetical protein	NA	NA	NA	NA
WP_000805577.1\|4647935_4648529_-\|tail	tail assembly protein	Q9MCR5	Enterobacteria_phage	7.3e-57	63.1
WP_000141754.1\|4648749_4649037_-	hypothetical protein	NA	NA	NA	NA
WP_120505551.1\|4649273_4649495_+	hypothetical protein	S5FNS4	Shigella_phage	3.4e-36	94.5
WP_000008235.1\|4649550_4650087_+	5'-deoxynucleotidase	S5MW55	Escherichia_phage	8.2e-100	98.9
WP_001242744.1\|4650077_4650440_+	hypothetical protein	U5P092	Shigella_phage	3.4e-65	96.7
WP_000627693.1\|4650439_4650745_+	hypothetical protein	U5P0J0	Shigella_phage	3.4e-50	99.0
WP_000132739.1\|4650833_4651025_+	AlpA family phage regulatory protein	A0A0P0ZBL0	Stx2-converting_phage	1.7e-31	100.0
WP_001007952.1\|4651005_4652184_-\|integrase	site-specific integrase	K7P7J2	Enterobacteria_phage	1.7e-230	99.2
4656453:4656465	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4675481 : 4686981

Bacillus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001551312.1\|4675481_4676870_-	phosphomannomutase CpsG	A0A127AWJ1	Bacillus_phage	2.9e-32	27.4
WP_001286270.1\|4676873_4678322_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	2.5e-58	32.3
WP_001421539.1\|4678314_4678815_-	GDP-mannose mannosyl hydrolase	NA	NA	NA	NA
WP_000043606.1\|4678817_4679783_-	GDP-L-fucose synthase	D1LW79	Prochlorococcus_phage	1.7e-87	50.8
WP_001140914.1\|4679785_4680907_-	GDP-mannose 4,6-dehydratase	M4QRT5	Synechococcus_phage	5.3e-133	65.5
WP_000799972.1\|4680933_4681950_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_000234390.1\|4681968_4682988_-	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	3.7e-85	48.3
WP_000183077.1\|4683297_4684191_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	1.0e-46	42.0
WP_000999474.1\|4684433_4685429_-	SDR family oxidoreductase	A0A1V0QG29	Shearwaterpox_virus	8.6e-10	26.7
WP_001115975.1\|4685586_4686981_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	2.4e-18	31.9

DBSCAN-SWA_12

4780686 : 4790129

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001551350.1\|4780686_4781823_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	5.0e-163	97.4
WP_001551351.1\|4781819_4783820_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
WP_001295429.1\|4783944_4784406_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_001551352.1\|4784447_4784918_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	5.2e-82	99.4
WP_001308766.1\|4784964_4785684_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|4785680_4787366_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240398.1\|4787587_4788319_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	2.8e-111	99.0
WP_001216963.1\|4788378_4788486_+	protein YohO	NA	NA	NA	NA
WP_000783134.1\|4788466_4789198_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569343.1\|4789202_4790129_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.3e-23	30.8

DBSCAN-SWA_13

5253193 : 5295932

Salmonella_phage(52.27%)

terminase,head,tRNA,tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295367.1\|5253193_5253730_-\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
WP_000190644.1\|5253754_5254390_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA
WP_001013779.1\|5254598_5255447_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_001253100.1\|5255757_5256024_+	hypothetical protein	A0A0M3ULK3	Salmonella_phage	2.7e-35	83.0
WP_001039127.1\|5256325_5257171_+	hypothetical protein	NA	NA	NA	NA
WP_000904955.1\|5257175_5257490_-	recombinase family protein	A0A1S6L009	Salmonella_phage	1.6e-39	89.9
WP_077634188.1\|5257516_5257915_+\|tail	phage tail protein	A0A0F7LBW5	Escherichia_phage	8.1e-12	37.3
WP_001174919.1\|5257917_5258358_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.5e-51	66.7
WP_024192484.1\|5258329_5258923_-\|tail	phage tail protein	Q9MCR5	Enterobacteria_phage	7.0e-60	64.9
WP_001551478.1\|5258922_5259717_-	hypothetical protein	K7PH60	Enterobacterial_phage	6.9e-79	91.0
WP_000049943.1\|5259716_5260397_-	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	1.5e-103	78.8
WP_001551479.1\|5260393_5261593_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	4.9e-185	83.6
WP_001270631.1\|5261592_5261946_-	hypothetical protein	A0A0M4R339	Salmonella_phage	1.5e-54	88.9
WP_001551480.1\|5261945_5262698_-	hypothetical protein	A0A0M5M1K7	Salmonella_phage	8.5e-87	65.5
WP_001551481.1\|5262758_5263271_-	hypothetical protein	NA	NA	NA	NA
WP_001551482.1\|5263267_5263603_-	hypothetical protein	A0A0M4RTY3	Salmonella_phage	1.7e-23	71.2
WP_001551483.1\|5263602_5264667_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	4.2e-156	81.1
WP_000155119.1\|5264669_5264972_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	2.2e-49	92.0
WP_001298404.1\|5264971_5265559_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	3.4e-83	88.0
WP_001551484.1\|5265558_5267544_-	hypothetical protein	A0A0M4REK7	Salmonella_phage	3.8e-174	53.3
WP_023141050.1\|5267533_5267710_-	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	1.6e-12	70.0
WP_000393954.1\|5267721_5268174_-	hypothetical protein	A0A0M4S6U8	Salmonella_phage	4.7e-56	72.7
WP_000109249.1\|5268177_5268618_-	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	7.0e-57	75.3
WP_001551485.1\|5268628_5269774_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	5.2e-160	73.5
WP_001349562.1\|5269777_5270341_-	hypothetical protein	A0A0M4R331	Salmonella_phage	3.4e-80	76.3
WP_001551486.1\|5270315_5270705_-	hypothetical protein	A0A0M3ULK0	Salmonella_phage	3.3e-66	95.3
WP_142767562.1\|5270691_5271246_-	hypothetical protein	A0A0M4S631	Salmonella_phage	7.4e-80	83.2
WP_001551489.1\|5271242_5271650_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	1.5e-69	94.8
WP_001107515.1\|5271615_5271837_-	hypothetical protein	A0A0M4RTX5	Salmonella_phage	7.7e-12	68.6
WP_001551491.1\|5271878_5272820_-	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	1.6e-154	86.6
WP_001066732.1\|5272831_5273338_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	3.7e-70	79.9
WP_001551492.1\|5273341_5274562_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	9.3e-200	88.0
WP_136759112.1\|5274576_5275311_-\|head	phage head morphogenesis protein	A0A0M4REK0	Salmonella_phage	5.2e-97	85.1
WP_001551494.1\|5275201_5276668_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	6.0e-262	92.0
WP_001551495.1\|5276667_5278290_-	hypothetical protein	A0A0M5M1R6	Salmonella_phage	0.0e+00	95.6
WP_000162796.1\|5278292_5278865_-\|terminase	terminase small subunit	A0A2H4J480	uncultured_Caudovirales_phage	1.4e-60	69.6
WP_001551496.1\|5278926_5279451_-	hypothetical protein	K7P6W1	Enterobacteria_phage	2.6e-42	67.7
WP_001194119.1\|5279434_5279911_-	glycoside hydrolase family protein	Q8SBE0	Shigella_phage	2.1e-86	96.2
WP_000781776.1\|5279914_5280256_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	2.8e-53	91.9
WP_001551497.1\|5280788_5281211_-	hypothetical protein	Q8W638	Enterobacteria_phage	8.0e-42	65.0
WP_000034494.1\|5281236_5281527_-	hypothetical protein	NA	NA	NA	NA
WP_001551498.1\|5281842_5284104_-	bifunctional DNA primase/polymerase	NA	NA	NA	NA
WP_000016208.1\|5284107_5284308_-	transcriptional regulator	K7RWG7	Bacteriophage	1.0e-07	50.0
WP_001551499.1\|5284449_5285124_+	helix-turn-helix transcriptional regulator	B6SCU0	Bacteriophage	1.8e-59	51.1
WP_001551500.1\|5285499_5286069_-	hypothetical protein	K7P861	Enterobacteria_phage	3.2e-38	52.7
WP_001551501.1\|5286439_5287342_+	hypothetical protein	Q3LZP9	Bacteriophage	6.1e-07	54.4
WP_001551502.1\|5287344_5288646_+	DUF2800 domain-containing protein	B6SCX9	Bacteriophage	5.2e-132	55.5
WP_000769005.1\|5288661_5289210_+	DUF2815 family protein	Q775A5	Bordetella_phage	2.1e-66	65.9
WP_000551014.1\|5289262_5289892_-	hypothetical protein	NA	NA	NA	NA
WP_001551504.1\|5289938_5292002_+	hypothetical protein	Q775A3	Bordetella_phage	6.7e-275	67.7
WP_001551506.1\|5292066_5292828_+	nucleotide-binding protein	NA	NA	NA	NA
WP_001551508.1\|5293063_5293258_+	hypothetical protein	NA	NA	NA	NA
WP_001551509.1\|5293257_5293542_+	VRR-NUC domain-containing protein	B6SD64	Bacteriophage	8.3e-27	68.2
WP_001551510.1\|5293557_5294475_+	hypothetical protein	NA	NA	NA	NA
WP_001551511.1\|5294537_5295932_+	DEAD/DEAH box helicase	Q3LZN8	Bacteriophage	1.0e-210	73.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP041358

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 5700

Stx2-converting_phage(75.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000099150.1\|477_2016_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.9e-292	98.8
WP_000612626.1\|2064_2412_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_000839179.1\|2408_2813_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
WP_032145081.1\|4191_5700_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.1e-43	31.6

DBSCAN-SWA_2

17935 : 22803

Enterobacteria_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000065240.1\|17935_18691_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.2e-33	33.9
WP_142767521.1\|18687_20187_-\|transposase	IS21-like element ISEc10 family transposase	NA	NA	NA	NA
WP_011478084.1\|20615_20987_-	hypothetical protein	NA	NA	NA	NA
WP_032145081.1\|21294_22803_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.1e-43	31.6

DBSCAN-SWA_3

27380 : 36675

Enterobacteria_phage(33.33%)

integrase

attL 17783:17797|attR 39316:39330

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
17783:17797	attL	NA	NA	NA	NA
WP_001066947.1\|27380_28121_+\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	1.6e-24	57.6
WP_001309253.1\|28363_29341_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	6.1e-101	59.5
WP_000371372.1\|29653_29878_+	hypothetical protein	NA	NA	NA	NA
WP_001270422.1\|30397_30685_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	1.3e-19	47.4
WP_001132895.1\|30681_30933_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_071532442.1\|31306_31492_+	hypothetical protein	NA	NA	NA	NA
WP_000817635.1\|31690_32896_+	ParA family protein	Q1MVJ3	Enterobacteria_phage	1.6e-204	89.2
WP_000756328.1\|32892_33855_+	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	2.3e-113	68.2
WP_072164940.1\|34994_35495_-	DUF4113 domain-containing protein	NA	NA	NA	NA
WP_001309256.1\|35604_35916_+	hypothetical protein	NA	NA	NA	NA
WP_000086171.1\|35991_36675_+	DNA methylase	A0A2I7RE86	Vibrio_phage	7.9e-31	38.3
39316:39330	attR	NA	NA	NA	NA

DBSCAN-SWA_4

42537 : 50331

Pseudomonas_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072198834.1\|42537_42876_+	class I SAM-dependent methyltransferase	A0A059VA49	Pseudomonas_phage	1.1e-09	39.1
WP_071589698.1\|42786_42981_-	hypothetical protein	NA	NA	NA	NA
WP_024187997.1\|42961_43405_-	hypothetical protein	NA	NA	NA	NA
WP_032141058.1\|43561_43681_+	hypothetical protein	NA	NA	NA	NA
WP_000290834.1\|43706_44234_+	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	6.0e-47	74.4
WP_000006003.1\|44291_44525_+	DUF905 family protein	NA	NA	NA	NA
WP_001537566.1\|44585_46550_+	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	3.2e-24	27.5
WP_000845953.1\|46618_47053_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_001276217.1\|47049_47769_+	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_001312861.1\|48048_48207_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_001127499.1\|48960_49080_+	hypothetical protein	NA	NA	NA	NA
WP_001545326.1\|49103_49400_+	hypothetical protein	NA	NA	NA	NA
WP_001234445.1\|49509_50331_+	DUF945 domain-containing protein	A0A2C9CYF8	Yersinia_phage	3.4e-44	38.2

DBSCAN-SWA_5

57719 : 60957

Stx2-converting_phage(75.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001550332.1\|57719_59258_-\|transposase	IS66-like element ISEc8 family transposase	A0A0P0ZBS5	Stx2-converting_phage	9.3e-298	99.4
WP_000612591.1\|59307_59655_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.2e-61	100.0
WP_001171554.1\|59651_60032_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.4e-66	100.0
WP_142767522.1\|60091_60601_+	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA
WP_001278695.1\|60735_60957_+	conjugal transfer protein TraR	A2I309	Vibrio_virus	4.4e-07	40.8

DBSCAN-SWA_6

65297 : 65720

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001229309.1\|65297_65720_+	HNH endonuclease	C6ZR29	Salmonella_phage	9.4e-67	86.8

DBSCAN-SWA_7

84783 : 87711

Xanthomonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000205709.1\|84783_85530_+	type-F conjugative transfer system pilin acetylase TraX	A0A077JBM8	Xanthomonas_phage	2.4e-09	30.9
WP_000139329.1\|85584_86142_+	fertility inhibition protein FinO	NA	NA	NA	NA
WP_001336517.1\|86293_86497_+	hypothetical protein	NA	NA	NA	NA
WP_000760080.1\|87249_87711_+	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	1.0e-18	35.1

DBSCAN-SWA_8

94411 : 97906

Bacillus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001057737.1\|94411_95134_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.6e-34	35.5
WP_000621194.1\|95130_96603_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_001067855.1\|97201_97906_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_9

105748 : 112054

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000117262.1\|105748_106444_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.5e-29	38.9
WP_001267176.1\|106430_106916_+	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_000874189.1\|106940_107426_+	hypothetical protein	NA	NA	NA	NA
WP_001336919.1\|109410_109980_+	autotransporter outer membrane beta-barrel domain-containing protein	Q9LA58	Enterobacterial_phage	6.4e-26	44.2
WP_001189111.1\|110545_112054_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8

DBSCAN-SWA_10

118911 : 120140

Shigella_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_106378881.1\|118911_120140_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.9e-168	94.7

DBSCAN-SWA_11

124884 : 125646

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000020504.1\|124884_125646_+	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	8.0e-16	30.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP041359

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP041358

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection