CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP029823	Streptomyces malaysiensis strain DSM 4137 chromosome, complete genome	15 crisprs	WYL,c2c9_V-U4,csa3,DEDDh,DinG,RT,PD-DExK,cas4,casR	4	6	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP029823_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_1

2947932-2948012

Orphan

Consensus_repeat	Method
GACCCGCCCCCGACAGCGGCCACCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP029823_1

>merge|NZ_CP029823|1|2947932-2948012|CRISPRCasFinder
GACCCGCCCCCGACAGCGGCCACCGCCGCCACATCCGGCCCGAGCCCGGTCACAGACCCGCCCCCGACGGCGGCCACCGCC

>NZ_CP029823|1|1|2947932-2948012|CRISPRCasFinder
GACCCGCCCCCGACAGCGGCCACCGCC	GCCACATCCGGCCCGAGCCCGGTCACA
GACCCGCCCCCGACGGCGGCCACCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_099015441.1\|2962359_2963217_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224048
NZ_CP029823.1\|WP_069872456.1\|2945199_2945613_+\|SsgA-family-sporulation/cell-division-regulator	unknown	unknown	gnl\|CDD\|377399
NZ_CP029823.1\|WP_099015451.1\|2941950_2942151_-\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP029823.1\|WP_099015447.1\|2946637_2947306_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099015444.1\|2959310_2959865_+\|NADPH-dependent-FMN-reductase	unknown	unknown	gnl\|CDD\|274653
NZ_CP029823.1\|WP_079259547.1\|2953502_2954972_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143437
NZ_CP029823.1\|WP_099017162.1\|2957755_2958667_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP029823.1\|WP_099015454.1\|2939902_2940508_+\|DUF1203-domain-containing-protein	unknown	unknown	gnl\|CDD\|377693
NZ_CP029823.1\|WP_099015450.1\|2942129_2942978_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262
NZ_CP029823.1\|WP_093704548.1\|2955080_2956625_+\|choline-oxidase	unknown	unknown	gnl\|CDD\|235000
NZ_CP029823.1\|WP_093702913.1\|2941433_2941730_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225225
NZ_CP029823.1\|WP_099015440.1\|2963213_2964248_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP029823.1\|WP_099015448.1\|2945653_2946334_-\|GPP34-family-phosphoprotein	unknown	unknown	gnl\|CDD\|377552
NZ_CP029823.1\|WP_099015446.1\|2949477_2952846_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099015453.1\|2940680_2941403_-\|endonuclease-V	unknown	unknown	gnl\|CDD\|377374
NZ_CP029823.1\|WP_099015445.1\|2956777_2957743_+\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274645
NZ_CP029823.1\|WP_099015442.1\|2961096_2962257_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|234821
NZ_CP029823.1\|WP_099015443.1\|2959867_2961067_+\|SfnB-family-sulfur-acquisition-oxidoreductase	unknown	unknown	gnl\|CDD\|274924
NZ_CP029823.1\|WP_099015449.1\|2943474_2944971_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374970
NZ_CP029823.1\|WP_099015452.1\|2941745_2941946_-\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_069872456.1\|2945199_2945613_+\|SsgA-family-sporulation/cell-division-regulator	gnl\|CDD\|377399	pfam04686, SsgA, Streptomyces sporulation and cell division protein, SsgA. The precise function of SsgA is unknown. It has been found to be essential for spore formation, and to stimulate cell division.	3.44604e-40
NZ_CP029823.1\|WP_099015451.1\|2941950_2942151_-\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	1.02981e-26
NZ_CP029823.1\|WP_099015444.1\|2959310_2959865_+\|NADPH-dependent-FMN-reductase	gnl\|CDD\|274653	TIGR03567, FMN_reductase_NADPH, FMN reductase, SsuE family. Members of this protein family use NAD(P)H to reduce FMN and regenerate FMNH2. Members include the homodimeric, NAD(P)H-dependent enzyme SsuE from Escherichia coli, which serves as a partner to an FMNH2-dependent alkanesulfonate monooxygenase. It is induced by sulfate starvation. The NADH-dependent enzyme MsuE from Pseudomonas aeruginosa is outside the scope of this model (see model TIGR03566). [Central intermediary metabolism, Sulfur metabolism].	9.16527e-75
NZ_CP029823.1\|WP_093702913.1\|2941433_2941730_+\|hypothetical-protein	gnl\|CDD\|225225	COG2350, COG2350, Uncharacterized protein conserved in bacteria [Function unknown].	5.03915e-12
NZ_CP029823.1\|WP_099015443.1\|2959867_2961067_+\|SfnB-family-sulfur-acquisition-oxidoreductase	gnl\|CDD\|274924	TIGR04022, Acyl-CoA_dehydrogenase_type_2_domain, sulfur acquisition oxidoreductase, SfnB family. Members of this protein family belong to the greater family of acyl-CoA dehydrogenases. This family includes the sulfate starvation induced protein SfnB of Pseudomonas putida strain DS1, which is both encoded nearby to and phylogenetically closely correlated with the dimethyl sulphone monooxygenase SfnG. This family shows considerable sequence similarity to the Rhodococcus dibenzothiophene desulfurization enzyme DszC, although that enzyme falls outside of the scope of this family. [Central intermediary metabolism, Sulfur metabolism].	0
NZ_CP029823.1\|WP_099017162.1\|2957755_2958667_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	9.51799e-34
NZ_CP029823.1\|WP_099015454.1\|2939902_2940508_+\|DUF1203-domain-containing-protein	gnl\|CDD\|377693	pfam06718, DUF1203, Protein of unknown function (DUF1203). This family consists of several hypothetical bacterial proteins of around 155 residues in length. Family members are present in Rhizobium, Agrobacterium and Streptomyces species.	2.16127e-41
NZ_CP029823.1\|WP_099015450.1\|2942129_2942978_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	2.8056e-05
NZ_CP029823.1\|WP_093704548.1\|2955080_2956625_+\|choline-oxidase	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	2.25883e-139
NZ_CP029823.1\|WP_079259547.1\|2953502_2954972_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143437	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.	0
NZ_CP029823.1\|WP_099015440.1\|2963213_2964248_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.06316e-133
NZ_CP029823.1\|WP_099015448.1\|2945653_2946334_-\|GPP34-family-phosphoprotein	gnl\|CDD\|377552	pfam05719, GPP34, Golgi phosphoprotein 3 (GPP34). This family consists of several eukaryotic GPP34 like proteins. GPP34 localizes to the Golgi complex and is conserved from yeast to humans. The cytosolic-ally exposed location of GPP34 predict a role for a novel coat protein in Golgi trafficking.	1.71672e-28
NZ_CP029823.1\|WP_099015453.1\|2940680_2941403_-\|endonuclease-V	gnl\|CDD\|377374	pfam04493, Endonuclease_5, Endonuclease V. Endonuclease V is specific for single-stranded DNA or for duplex DNA that contains uracil or that is damaged by a variety of agents.	9.76403e-92
NZ_CP029823.1\|WP_099015445.1\|2956777_2957743_+\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274645	TIGR03557, F420_G6P_family, F420-dependent oxidoreductase, G6PDH family. Members of this protein family include F420-dependent glucose-6-phosphate dehydrogenases (TIGR03554) and related proteins. All members of this family come from species that synthesize coenzyme F420, with the exception of those that belong to TIGR03885, a clade within this family in which cofactor binding may instead be directed to FMN. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP029823.1\|WP_099015442.1\|2961096_2962257_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|234821	PRK00719, PRK00719, alkanesulfonate monooxygenase; Provisional.	4.70429e-167
NZ_CP029823.1\|WP_099015441.1\|2962359_2963217_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	1.80482e-100
NZ_CP029823.1\|WP_099015449.1\|2943474_2944971_-\|hypothetical-protein	gnl\|CDD\|374970	pfam17061, PARM, PARM. Human PARM-1 is a mucin-like, androgen-regulated transmembrane protein that is present in most tissues, with high levels in the heart, kidney and placenta. It has been shown to be induced and expressed in prostate after castration and may have a role in cell proliferation and immortalisation in prostate cancer.	9.27962e-07
NZ_CP029823.1\|WP_099015452.1\|2941745_2941946_-\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	6.35285e-25

>NZ_CP029823.1|WP_099015447.1|2946637_2947306_-|hypothetical-protein
MRKPLHSFRGAALGAVAAAAVVAVAGIGSAQAHTPSAGAGAEAPAAVPQRTPAHLVPRELPPHPSSDWYAGDVTRGLPETPPFCVEKTLPSAGATHRTFWTEYDTGATQIVVRTGTVDAARKLAAAAEKKIRACAADWQGDYPQGTASWRDYGALTAEDGAHVYGVHTSYPDSEPGIHLFGVGRDGRTVTVVSWGEMGGYEQAPLADFKRTTTTAVVKLYHP
>NZ_CP029823.1|WP_099015448.1|2945653_2946334_-|GPP34-family-phosphoprotein
MPNGSLSLAASLYLLSYDPETGLPTAAHTALLVRAAALTELVQRGMLTDADGCPCPVADAATGDRALDGLLELIGESRPRSWQIWVGHQPRLTEHAVRDQMVAAGYLRAKGKRMLGLFPAREYTLERPEPVVGMRDDVVRVLHGEQPAAEVSERDAALVTLAAAGELRTVVTATDAKVRKRRILALGDRCGGMGPVLEKVIAQVRTALAAAVATAMLAATTAVTAT
>NZ_CP029823.1|WP_069872456.1|2945199_2945613_+|SsgA-family-sporulation/cell-division-regulator
MTTVIDQAVQAQLIASTPESRAIPACLRYERDDPFAVRVSFPPSASLDGSEVEWTFGRELLAAGLRGPAGSGDVQMWPCGSRRTVLEFHAPEGMAMVQFDTADLRRFLGRSYAVVPEGNEAGELDLDQGLASLLRDA
>NZ_CP029823.1|WP_099015449.1|2943474_2944971_-|hypothetical-protein
MTEGHAALDAAAYARIYEAEYPRLCGYARTLTGNPWVAGDLVAEAHYSVWRRLRAGHPLGADAIPDELTSAVRALSAGAGGWGPAQQASYLEPLVRVLDELPQRWVKVLWLAEVDGLPPEEVARRAGMTDDDAAALVERVRESVRQEFLRAQPGYPASAACGAHWERLPDHVRGADSPHQAEEIAVHIDGCRDCRGRMEQLVAADDRLPALVGPALLDLYDRGMARFLAPLVAAGGAAAVAAAGADTMTSGGAHAAPSNGPLVSSRRSMQHLVRGRVRQAGPVAVAAAAGGVLLVAGAAVMTGLALTDGGSAEAQQPATASTPSISDTSDSSSASSGSSSASGTSGASRHSDGPRAGVPGEASRNRPSTSGVPTGHSPADVPSSAVSPSRKAPSSSSSASPSSRPSSPSSSASSSASSGPSHRPTGEPTAEPTGKPTGGGTADPGGTPSGRPTQRPTDESTQRPTTRPTDSGSASGSASGSGDSRDCVSLVVRLCVSH
>NZ_CP029823.1|WP_099015450.1|2942129_2942978_-|helix-turn-helix-domain-containing-protein
MTFQPRELFPERSARDLFGAEIRRHREKADMSLRRLSEVLNYSKSHLARIEAAESLPYDDLPAKLDACFGTDGLFARLYALAKNEPFPGKYRRMIELESQAVIIEQYMGATMPGLLQTPDTAECWLRCGRPHAPDAEIEAMVKARIDRQSLLDRPKPPRCWFILEEAVLRRPVGGLQVMHRQLASLIERGTQPHVTLQGLPFTAGEHAETGGSLTLFTVPHGALVAYDESSQSGTIVEDQETVARRRENYDLLRAMALSPRDSEAMIRAVMKDWSPCQPPRA
>NZ_CP029823.1|WP_099015451.1|2941950_2942151_-|DUF397-domain-containing-protein
MPTTPGLSVATWRKSSYSNPDGGNCVEVADNLPGVVPVRDSKNPDGPTLIFAVGAWATFIASLKMD
>NZ_CP029823.1|WP_099015452.1|2941745_2941946_-|DUF397-domain-containing-protein
MSTTPDLSTAAWRKSSYSNNDGGNCVEVADNLPGGVVPVRDSKNPDGPAIPFPTKTWAAFIASLKA
>NZ_CP029823.1|WP_093702913.1|2941433_2941730_+|hypothetical-protein
MFVLEITYTASADRVEAALPEHLVWVDDHFANGAFLASGPKNPRDGGVILALGDDRTKIEEMVASDPFIVAGVGEYTITEFLATRTAPALTEYRQQRP
>NZ_CP029823.1|WP_099015453.1|2940680_2941403_-|endonuclease-V
MTSAVDPRYELPRDWPSTEAEAIAVQERLRASVVVGGEVPAPGTGPGAVVGVDVAYDDERDLVAAAAVALDARGLDVVAEATAVGRVTFPYVPGLLAFREIPAVLDALGDLDRRLGRRPDLVVCDGYGLAHPRRFGLASHLGVLTGLPTIGVAKNPFGFRHADPGPRRGDWAPLLDGEEEVGRALRTRDGVKPLFVSVGHRTTIAAACAYTLHLARDFRQPETTRRADALCRRALKAVGP
>NZ_CP029823.1|WP_099015454.1|2939902_2940508_+|DUF1203-domain-containing-protein
MFRPESDGAPSPCQVHPRLSAPSESRQRSASPPARLDRMDGNHEMRAIAPEVLKQLRITDDAGNPPRVVVEDEEGGNPMRCCLGRSQPHETIALVSYAPLRRWARETGATPGPYNEVGPVFIHLEECDGWTGPGVADGIRGQRRVLRAYTAEGNILGGQLLNDGEPTIEEGLAELYEDPRVAAVHVRAVEFGCFLAETRRV
>NZ_CP029823.1|WP_099015446.1|2949477_2952846_-|hypothetical-protein
MRELAGRARAASAEGRLGALIEELERRGTYERRLAAVAAAAGGRTGHLAARLADPDPVVRHRALDTARRGGPGAIADDALAAAFEDAPAAVRRELARTVVAGRRTALADRLIEPYRERWGDGEAARLLPGCGPETVARLLPGLFHAVRGWRPLVARHPLAVLDEAARQLSALPAPLRTDWWTRYAPCVALAAPAEPERVLELLEDHCDGPLPASVRARLPVLVTAEPGRTLRLLIAPEHSGTRRRLDRAVLRRIVRADPPELAELGRALRHDADALARLLAALPPARRSALHDAATDGVDPAHAVVEPAVLEVLPRSRRQAEARRMAARARERGAPWTTVLESVAHLPFEEAREELAAAVRRPSAEDRALAYPLLVRCVARSGDPDALTTLLDLLERLRNEQDPVRSAALGALARTHPALFTDDAAEHLDRIAADAISARDSSSATRQALRHLAVALLREHAVTGRRQLLGWALRTLTRLAGSVGATDLGRLDHRLRHGQERAVCEALRPWLEAGAERVDHELTFALARSLGRRAHALPEVQELLWQAISFGSDATVRTAIGLWLEPPAERDARVAELLTHEPSAAVLPPVLAVLTRRRTDLLDLVLGDTPPYGRFLAHGTHWTPPTGRDTGRWLPRQQTAAARVLDRAAADTSLRPDQRADAVADAASIPGTGAATVRTWAAAADGALTGPADVVLAESALAALAHTDRAGDALPVLLAHAGGDRARVAVYAATRASRYVEPSRLAPLVRGVLAPDGVATAVPPVPAKVTSRKEAARLAATLLPAADAAALLADAFEQPGQHPDVQAACVAFATGLLDAKRAWELLTAAASGRRELRRAVLRTRPLDLPEAHRARYAQLIRVVCDTDDPEVAADGYGALAGWSPWAPDAAAVLVAAVTDLGNRASWRAAADALLDLMAAAAEGSTGDNPLAWALAALATADARPGGPDAEPDRDRPAHRRIQHLADRLATRARMRPRVTRRTARAAGELLAGYETFIQEAAHVLVNAVDLDARPGPLSAGLARLARLHTTRPALAVRTADTLRRRLNTASRPGSDAAMLRAAGDLDEDGGHASGLFAATLTEVGGARTEWAEPWRDRLRALRAHPHADVRDAALRLTTVVE
>NZ_CP029823.1|WP_079259547.1|2953502_2954972_+|aldehyde-dehydrogenase-family-protein
MPELFIGGHWTTALDGHSREIHCPADGSLVAVVAEAGPKDAAAAVAAARDAFDRGSWPGTPAADRGGLLLRVADLLEREKPALARAESLDTGKRLVESEYDLDDIANCFRHFGNLVSAAGAGRVVEVGSPEIDSRVVHEPVGVCALITPWNYPLLQTAWKVAPALAAGNTFVLKPSELTPHTAIHLMRLLTEAGLPGGAANLILGSGATAGAPLVTDERVDMVSFTGGVVTGRWIMAAVAPTVKKLALELGGKNPNIVFTDCDFDTAVDYALTAVFLHSGQVCSAGARLLVQEQLHDAFVDEIVHRARNIRLGGPFDENARAGPLISAQHRQKIADYVAAGIDEGAVLRCGGTVPDDPDLEKGHYYLPTVLDDCTPDMSVVQEESFGPVLTVERFRDEDEAVALANDTMYGLAGAVWTQDAEKAHRVASRLRAGTVWINDFHPYVPQAEWGGMKQSGIGRELGPSGLHEYQELKHIWRNTAPRAQRWFD
>NZ_CP029823.1|WP_093704548.1|2955080_2956625_+|choline-oxidase
MDQFDYVVVGGGTAGSVVAARLSEDPSVSVCLLEAGPSDRGDDNILRLNRWMGLLGSGYDWDYPVRPQQKGNSFLRHARAKVLGGCSSHNSCIAFWAPAEDLDEWAANGLDGWSAADCFPLFRRLEDNDAPGDHHGRGGPVRIRTVPPEDPCGRAVLAACVEAGIPITPFNTGTTVVRGANWFQINAREDGTRCSASVAYLHPVMDSRPHLEVRTGLRAKRLVLDEDRRCVAVDYLSPDLIHTLRVHARREVIVCCGAIDTPKLLMLSGIGPAGHLRETGVDVVVDSPGVGGNLRDHPEGVIMWNAEQPMINTSTQWWEIGIFADTEPDLDRPDLMFHYGATPFDLNTYRRGYPTSENAFCLTPNVTRARSRGTVRLASRDFRDKPHVDPRYFTDPYDMDIMTRGLLLARKIAARPALAMWAGAELAPGPDVHSTAELAAYVRQTHNTAYHPACTVRMGAPDDPDAPLDPRLRVKGVTGLRVADGSAMPYLIAVDPCVTTMMIGEKCADLIKRT
>NZ_CP029823.1|WP_099015445.1|2956777_2957743_+|LLM-class-F420-dependent-oxidoreductase
MVRWGYTMMTEQAGPRQLVDDVVRAEQIGFDFSVTSDHYFPWLDSQGHAPYAWSVLGAAAQATSSIPLTTYVTCPTVRYHPAVVAQKAATLQLLSEGRFRLGLGAGENLNEHVVGQGWPSADVRHEMLEEAIEIIRALFDGGYLTHRGTHYDVDSAKLWDLPDQPPPIGVAVSGPRSCGLAGRLADMLIATEPKSELVADFERDGGAGKPRIGQIPVSYDPDRDAAIARAHDQFRWFGSGWKVNSELPGPASFAGSTQFVRPEDVAASIPCGDDVEEFTELIRPFVDAGFTDVALVQIGGDHQRPFLDWAEKQLLPALREL
>NZ_CP029823.1|WP_099017162.1|2957755_2958667_-|LysR-family-transcriptional-regulator
MRIEQLEYIAAVTRLGSLRRAAEELHLSQPALSETVRNLERELGVDLLERKRSGATISAEGRELLPHIVSVIEAVDRLRGAAGDQHRVSRMIRLGTVNTATVPLLIPALREFRATHPVTQVEVVGAQQTEIRRALLEGSFDLGLVNYLRGDDVPPDLETTELLRGRPVVCLRPDSPLAARSAVSAADLLDGREPLIVMRSGYLMHRFIHRLLAGRAPSFSYSTDGAEMGKLMVAEGLGVTVLPDFSVIGDPLERGGAITHRPLADGEATDVLLVIQRRRSGSVPRAVRDLHELFVRRAGTRYA
>NZ_CP029823.1|WP_099015444.1|2959310_2959865_+|NADPH-dependent-FMN-reductase
MATVLSLSGSPSATSRTARLLRHLDARLTAQGHQVIPLDVRTLPPAALLGADFSHPAIVRAKALVEQADGLVVGTPVYKAAYSGLLKSLLDLMPQYALAGKTVLPLATGGTTAHVLAIDYALRPVLSSMGAAHIVQGWFTLDKDITVEPDGGVSVAAGAAEALEQVVDQFSAALGHPTVLAAAS
>NZ_CP029823.1|WP_099015443.1|2959867_2961067_+|SfnB-family-sulfur-acquisition-oxidoreductase
MSSPPGPAHVIADDTEALKVAAALAEEFRTGAAERDARRRLPRAELDRLSASGLPAITVPAGYGGADVSTVTLAEVFRLLAAADASLAQIPQSHFVYINVLRRQGTQAQQAFFFGEVLAGKRFGNAQSEAGTKHIQDIRTRLTPAAAGSYTLTGVKHYSTGALFADWIPVLARAENDDLHVAYVPRDAPGLTVEDDWDGMGQRTTASGTVKLDAVPVPADRVVPHHLTFRGPQLHGAIAQLLHAAIDAGIASGALAEAVAFVRAKSRPWFESGFETAAEDPLLIQRFGELALQVRGAEALLSAAARSVDTARGQLDDDTAAEASIAVAAAKVAAANAAVETGSSLFEVSGTRSALDSLGLHRHWRDARTHTLHDPARWKVQHIGRYVLNGTKPPRHGLL
>NZ_CP029823.1|WP_099015442.1|2961096_2962257_+|LLM-class-flavin-dependent-oxidoreductase
MSLTFHWFLPTNGDSRHVVGGGHGTPVTPAGGDRPPSVGYLSQIARAAEQLGFVGALTPTGAWCEDAWLTTAMVSRHTERLKFLVAFRPGFLSPTLGAQMASTYQRQTGGRLMLNVVTGGESHEQRAYGDFLDKDARYARTGEFLGIVRDLWDGKTVDLDGEHLRVEGAKLARLPDPVPDVYFGGSSPAAGQVAARHADVYLTWGEPPAQVARKIAWIRSLAAERGRTLRFGIRLHVITRDTADEAWAEARRLLDGFDPETVRSIQTGLGRSESEGQQRMLALHGGSLDNLEIHPNLWAGIGLVRGGAGTALVGSHAEVAERIAEYHRLGIDEFILSGYPHLEEAYWFGEGVLPLLRSQGLWSHPFQPAAPEQPTAQVPFAAAGSS
>NZ_CP029823.1|WP_099015441.1|2962359_2963217_-|ABC-transporter-ATP-binding-protein
MTGPALVVQGLRKSYALPGGGRTTAVADVSFSVPAGGSLGIVGESGSGKTTVARILVGLVCPDAGTIAVNGRERTPGRRRGGMPLGPGARRAARLSRAREIQIVFQDPYVSLDPRLTARQCLHTALRLHGRYEGQAATGRIGELLDQVGLGKREADARPRGLSGGQRQRLAIARALAVEPEVLVLDEAVAALDVSIQAQILRLLADIRRETGVALVFVSHDLAVVRHITDDTLVMRRGRAVETGPTARVLESPEDPYTRLLLSSVPHDGWDPAETVRLRAELAER
>NZ_CP029823.1|WP_099015440.1|2963213_2964248_-|ABC-transporter-ATP-binding-protein
MLLDIEDLTIQLPAGAAARPMLADVSLRVGRGEVVGLVGESGSGKSTTARAVLRMLPEGARTSGSVWVDGEDVLAMDQARLRRHRSRTVSMIFQDPRSAMNPVRRIGDFLTDPLTRVLGLPRRAAVARAAELLASVGLSDPERRMRQRPHELSGGMLQRVVIAAALSTAPDLLLADEATSALDATTQAEVLALLRDIQEERRRAGSGLGTLFITHDLPLAAAYCDRVYVMYAGRMVEHQPARGLFADPRHPYTRGLLDCSPTLGDDREPRPIPGRPPSLSDAFTGCPFLPRCARAEAECETWAPVAFPFGGADGDGDGDGDGDGSAEGGSAACRRLELVSRSSA

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Crispr_ID: NZ_CP029823_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_2

3150029-3150101

Orphan

Consensus_repeat	Method
GCGACCCCATGGCCCCGCGACCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP029823_2

>merge|NZ_CP029823|2|3150029-3150101|CRISPRCasFinder
GCGGCCATACGGCCCGGCGACCCCATGGCCCCGCGACCCCATGGCCCTGCGAACCCCGTGGCCCCGCGACCCC

>NZ_CP029823|2|2|3150029-3150101|CRISPRCasFinder
GCGGCCATACGGCCCGGCGACCCC	ATGGCCCCGCGACCCCATGGCCCTG
CGAACCCCGTGGCCCCGCGACCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_069867020.1\|3151075_3151429_+\|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|319898
NZ_CP029823.1\|WP_099017155.1\|3156591_3158703_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP029823.1\|WP_099015349.1\|3143473_3144028_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153228
NZ_CP029823.1\|WP_069867009.1\|3138182_3138971_-\|GAF-and-ANTAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377145
NZ_CP029823.1\|WP_079259403.1\|3160044_3160878_-\|M55-family-metallopeptidase	unknown	unknown	gnl\|CDD\|176450
NZ_CP029823.1\|WP_099015339.1\|3158711_3160052_-\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|181163
NZ_CP029823.1\|WP_099015346.1\|3147684_3148212_-\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|377816
NZ_CP029823.1\|WP_099015345.1\|3149024_3149408_+\|DUF2795-domain-containing-protein	unknown	unknown	gnl\|CDD\|378655
NZ_CP029823.1\|WP_099015347.1\|3147102_3147678_-\|TIGR03086-family-protein	unknown	unknown	gnl\|CDD\|274424
NZ_CP029823.1\|WP_099015342.1\|3152361_3152757_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099015348.1\|3144024_3146124_+\|catalase	unknown	unknown	gnl\|CDD\|236886
NZ_CP029823.1\|WP_099015351.1\|3139145_3140336_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|366402
NZ_CP029823.1\|WP_099015350.1\|3141575_3143381_+\|thiamine-pyrophosphate-requiring-protein	unknown	unknown	gnl\|CDD\|181344
NZ_CP029823.1\|WP_069867022.1\|3155304_3155859_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP029823.1\|WP_099015341.1\|3152783_3155012_-\|DUF5107-domain-containing-protein	unknown	unknown	gnl\|CDD\|375006
NZ_CP029823.1\|WP_099015344.1\|3150242_3151052_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|316372
NZ_CP029823.1\|WP_069867018.1\|3149570_3149954_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341390
NZ_CP029823.1\|WP_099015343.1\|3151461_3151920_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_079259417.1\|3140562_3141528_+\|TIGR03557-family-F420-dependent-LLM-class-oxidoreductase	unknown	unknown	gnl\|CDD\|274645
NZ_CP029823.1\|WP_099015340.1\|3155851_3156595_-\|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl\|CDD\|225002

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_069867020.1\|3151075_3151429_+\|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	2.22525e-05
NZ_CP029823.1\|WP_099017155.1\|3156591_3158703_-\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	5.1917e-54
NZ_CP029823.1\|WP_099015349.1\|3143473_3144028_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	3.05357e-74
NZ_CP029823.1\|WP_069867009.1\|3138182_3138971_-\|GAF-and-ANTAR-domain-containing-protein	gnl\|CDD\|377145	pfam03861, ANTAR, ANTAR domain. ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.	1.71309e-15
NZ_CP029823.1\|WP_099015339.1\|3158711_3160052_-\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|181163	PRK07906, PRK07906, hypothetical protein; Provisional.	0
NZ_CP029823.1\|WP_099015346.1\|3147684_3148212_-\|phage-holin-family-protein	gnl\|CDD\|377816	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III. Phage_holin_3_6 is a family of small hydrophobic proteins with two or three transmembrane domains of the Hol-X family. Holin proteins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	1.18752e-09
NZ_CP029823.1\|WP_099015345.1\|3149024_3149408_+\|DUF2795-domain-containing-protein	gnl\|CDD\|378655	pfam11387, DUF2795, Protein of unknown function (DUF2795). This family of proteins has no known function.	5.14985e-08
NZ_CP029823.1\|WP_099015347.1\|3147102_3147678_-\|TIGR03086-family-protein	gnl\|CDD\|274424	TIGR03086, TIGR03086, TIGR03086 family protein. This family, like pfam07398 and TIGRFAMs family TIGR030834, belongs to the larger set of probable enzymes defined in family TIGR03083. Members are found primarily in the Actinobacteria (Mycobacterium, Streptomyces, etc.). The family is uncharacterized.	6.26089e-45
NZ_CP029823.1\|WP_099015348.1\|3144024_3146124_+\|catalase	gnl\|CDD\|236886	PRK11249, katE, hydroperoxidase II; Provisional.	0
NZ_CP029823.1\|WP_099015351.1\|3139145_3140336_+\|PAS-domain-containing-protein	gnl\|CDD\|366402	pfam00989, PAS, PAS fold. The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya.	0.00105349
NZ_CP029823.1\|WP_099015350.1\|3141575_3143381_+\|thiamine-pyrophosphate-requiring-protein	gnl\|CDD\|181344	PRK08273, PRK08273, thiamine pyrophosphate protein; Provisional.	0
NZ_CP029823.1\|WP_069867022.1\|3155304_3155859_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.31673e-23
NZ_CP029823.1\|WP_099015341.1\|3152783_3155012_-\|DUF5107-domain-containing-protein	gnl\|CDD\|375006	pfam17128, DUF5107, Domain of unknown function (DUF5107). This family is found in range of different bacterial species. In many proteins it lies N-terminal to a TPR-repeat region at the C-terminus.	1.04144e-28
NZ_CP029823.1\|WP_099015344.1\|3150242_3151052_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|316372	pfam13847, Methyltransf_31, Methyltransferase domain. This family appears to have methyltransferase activity.	9.66341e-36
NZ_CP029823.1\|WP_069867018.1\|3149570_3149954_+\|CBS-domain-containing-protein	gnl\|CDD\|341390	cd04622, CBS_pair_HRP1_like, CBS pair domain found in Hypoxic Response Protein 1 (HRP1) -like proteinds. Mycobacterium tuberculosis adapts to cellular stresses by upregulation of the dormancy survival regulon. Hypoxic response protein 1 (HRP1) is encoded by one of the most strongly upregulated genes in the dormancy survival regulon. HRP1 is a 'CBS-domain-only protein; however unlike other CBS containing proteins it does not appear to bind AMP. The biological function of the protein remains unclear, but is thought to contribute to the modulation of the host immune response. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	1.03869e-43
NZ_CP029823.1\|WP_079259403.1\|3160044_3160878_-\|M55-family-metallopeptidase	gnl\|CDD\|176450	cd08663, DAP_dppA_1, Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized putative peptidases.	2.60439e-116
NZ_CP029823.1\|WP_079259417.1\|3140562_3141528_+\|TIGR03557-family-F420-dependent-LLM-class-oxidoreductase	gnl\|CDD\|274645	TIGR03557, F420_G6P_family, F420-dependent oxidoreductase, G6PDH family. Members of this protein family include F420-dependent glucose-6-phosphate dehydrogenases (TIGR03554) and related proteins. All members of this family come from species that synthesize coenzyme F420, with the exception of those that belong to TIGR03885, a clade within this family in which cofactor binding may instead be directed to FMN. [Unknown function, Enzymes of unknown specificity].	2.09411e-167
NZ_CP029823.1\|WP_099015340.1\|3155851_3156595_-\|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl\|CDD\|225002	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism].	8.28052e-36

>NZ_CP029823.1|WP_069867018.1|3149570_3149954_+|CBS-domain-containing-protein
MSQNPPRYVREVMTRPAIWVHPDASLVEAAQLMRAQDIGDVLVAGDGELLGVLTDRDITLRAVAEGVDPLAVTCHAVCTPHPVTIGPDEEVAEAAARMRRHAVGRLPVVEAGRPLGVISLGDVLEPP
>NZ_CP029823.1|WP_099015345.1|3149024_3149408_+|DUF2795-domain-containing-protein
MQRGSDRLSVHKDDEMKHELQGLIRSGHPTRAEEWHDPEPAADDDPEVTLGPVPARGTTGEAEAVRFEFARRLGRTSFPTDREGLLSVLEDRHAPDGLIALAEELPTDRTFHTVQEVVSALGLRPNT
>NZ_CP029823.1|WP_099015346.1|3147684_3148212_-|phage-holin-family-protein
MSDKSAYPKAGLPTAGDLAEPVARAVREEVRRELRERSGRRAFRLYGGAAAAALYAGGALTACLVLLFAIALPAWLAALIVFVLLLGVAAWLKTSAARGAGPGAAAGPPAPSAPSAPSGPADSSGPSAPPTPPGSGAAPGSGAAPEGGAPPGSGAARQPPQSPYPHQPPHPPQTG
>NZ_CP029823.1|WP_099015347.1|3147102_3147678_-|TIGR03086-family-protein
MAENPLLARHREALDLFTERVHTIRPDQWDDPTPCTEWTVRDLVNHLAVEQMWVPPLVREGASVADQSDELEGDLLGEDPVATWDVVAAAARGAFREPGALDRMVDLSYGESPATNYCAQMTADAAVHAWDLSRAIGADERIPKPLVDFSVREVAPYAADLEETGLFAAPVEPPRGADAQARLLALLGREP
>NZ_CP029823.1|WP_099015348.1|3144024_3146124_+|catalase
MTEDRKERQREKYRAADPAEGPLTTDQGVAVDHTDDSLTVGERGPTLMEDFHFREKVTHFDHERIPERVVHARGAGAYGYFEPYESCAEFTRAAFLQDPSVRTPVFVRFSTVQGPRGSADTVRDVRGFATKFYTSEGNYDLVGNNMPVFFIQDGIKFPDFVHALKPEPQNEIPTGASAHDTLWDFVSLQPETMHMMMWLMSDRAIPRSFRMMQGFGVHTFRFVDAQGHGTFVKFHWKPKLGVHSLVWDEAQECAGRDPDFNRRDLWQAIEAGQYPEYELGVQLVPEEDEFNFDFDLLDATKIIPEEQVPVRPIGHMVLDRNPDNFFAETEQVAFHTGNVVPGIDFTNDPLLQARNFSYLDTQLIRLGGPNFSQIPVNQPVAPARTNHRDGYHQTMIHKGTSYSPNSLGGGCPALAGADGYAFSHYAERVEGHKIRKRSESFKDFYSQAALFWNSMTDWERRHIVEAFQFELGKVDAVHVRERTVEQLAHVDYDLASQVAQGIGVAMPEPGANNHKPQASPALSLDNLHGDGSIRTRQIAVLVTDGVDTGQLAQAQEALTAQGAVVEAIAPHDGKVLGADGNGYAVDRALPTVASVLYDAVLLPGGPTGTPALGSDSAAMRFVRDAYRHGKPIGALGSGVGILSTLEPEGLHIASGHGHVCTDRGVVTDTTTGAASEDFTRAFTEAIAAHRHWNRPPVRC
>NZ_CP029823.1|WP_099015349.1|3143473_3144028_+|type-1-glutamine-amidotransferase
MKVAFLVAPEGVEQVELTDPWQAVRDAGGTPRLVSTKPGRIQAFNHLDKADTFEVDQVVKDATVEEYDALVLPGGVANPDFLRLDRKAVAFAKGFFDAGKPVAAICHAPWTLVEADVVRGRTLTSWPSLRTDITNAGGTWVDEQVKVCTAGPNTLITSRNPDDLKAFREAFLEEFAKTTKGAAR
>NZ_CP029823.1|WP_099015350.1|3141575_3143381_+|thiamine-pyrophosphate-requiring-protein
MTMKVADYILARLSEWSVEHVFGYPGDGINGLLAAWGRAGNEPRFIQARHEEMAAFEAVGYAKFSGRLGVCAATSGPGAIHLLNGLYDAKLDHVPVVALVGQTHRSAMGGSYQQEVDLHSLFKDVASDFLETVTVPEQLPNVLDRAIRTAYARRAPTAVIIPADVQELDYAAPTHEFKMVPSSLDRSGWSAVPSGTSVERAAEVLNAGERVAIMVGQGAAGARAEVQRVAETLGAGVAKALLGLDVLSDELPYVTGSIGLLGTRPSYELMRDCDTLLTIGSSFPYAQFLPEFGKARGVQVDLDPHMIGMRYPYEVNLVGDARETLLRLLPLLEREESRDWQEGIIAGVRRWREVMARRAEVSADPINPEYVAHCLDPLLPTDAIVTCDSGSVANWYARHLRMRGEMRASLSGTLATMGCGVPYAIGAKFARPDRPAVALVGDGAMQMNGLAELITVAKYHTSWEDPRLVVGVWNNQDLNQVTWEMRAMGGAPQFLPSQELPDVSYARFAESLGMTGIGVEKPEQVEGAWREALSADGPAVVEFRTDPAVPPIPPHATWEQMEATVGSIVKGDTDRAGMVRQGLKAKVQEFLPHRKKAPDDS
>NZ_CP029823.1|WP_079259417.1|3140562_3141528_+|TIGR03557-family-F420-dependent-LLM-class-oxidoreductase
MTEYGYFLAAEEHGPAELVEQARMAEQAGFSHLWISDHYHPWNDAQGQSSFVWTVIGALAQATSLPVQTAVTCPTIRMHPAIVAQAAATSSVLLEGRFRLGVGSGEALNEHVLGDRWPPAPIRLEMLEEAVTVMRQLFEGRRVTHHGKHYTVENARLYTVPEEPVPIDIAAFGSTAAALAGRVGDGFITMTPDAELVARFRRGSGAGGNSKMASGGLKVAYGPDPDEALGTAHRLWPTEGLPGELLSTLTTPGQFEQAAELVTPERMAGKVVCGDDADAHVGALSAYAEAGFDTVYVNQIGPDQRGFFDFYRTKVLPQVAG
>NZ_CP029823.1|WP_099015351.1|3139145_3140336_+|PAS-domain-containing-protein
MPGAQEFGAELTDFRRRVEELRTARALPSQERPSLLDAALFELQHAVDVLWPRYEELAAATRGPGGGRADPQEQQLLRALFQRLPVAAVLLDRDAVVRRMNFAATQLFNTRAGYATGRPLTTSLRQDAQAALRSQVAAVARGEGDRSLTVWLSQPTADGEARVTLAALRPPGEPHPAVLAAFQPGMAGPPGEGAAGARRPESRPDLAEVTRHAELLDLVDDMAAALLRTALAGAGPEAVLAGAAEVLHGRFADWVIADLAPEANPGAPRRVVALGPQEAVGDRTASLAEQDPADCPLVLDALREGVSALRMSPYDADAFGQDATGAPVLVREEVTSLLCIPLRASATGPVRGALTFFRTGGRGVFEMAEAGVADRIARHIALAMPRTAPRAAAPGA
>NZ_CP029823.1|WP_069867009.1|3138182_3138971_-|GAF-and-ANTAR-domain-containing-protein
MPDRTHLRVARQTDAPSLGRGLAELAEQAAAGTPDSCGATATAVLADAPSGGVAAERTTAATHPDLSALVAVQLSAGEGPIPMALDTGRPAGADDLLRDDRWPHYRARALDAGVRSSAALPFVRDGLTVAVSVYGLRPGPLGKAAQGATELLGDLATESMARDRLYRAALVQVDQLDTALRTRPVVDQACGIVMYVLGCDPDQAFDLLRRLSQRTNRKLAELAGTVVRTRGRGLEENLIAFGRSAAPGPGRPASGPDLDPPG
>NZ_CP029823.1|WP_099015344.1|3150242_3151052_+|class-I-SAM-dependent-methyltransferase
MPKDTAVYTHGHHESVLRSHTWRTAANSAAYLTGHLRPHMRILDIGCGPGTITADLAELVPQGQVTGVDAEESVLERARAVAEERGLANVSFAVADVHALDHPDDSFCVVHAHQVLQHVGDPVGALREMRRVCAPGGIVAVRDSDYAAMTWYPSVPGLDSWLDLYRRVARANGGEPDAGRRLRSWALEAGFTDITSTATAWCYTTEEERTWWSGLWADRTVASSYARLAVDGGHATEEELRSIAAAWRTWGGATDGWFAVLHGEILCRV
>NZ_CP029823.1|WP_069867020.1|3151075_3151429_+|glyoxalase/bleomycin-resistance/dioxygenase-family-protein
MDILGTSLRVCVDDLDSAIAAYERLTGAEAVRFQRGPVAVAAVGPFFLMSGPESELSILRKITATIAVKDVDEAIADLTAVGGQIVAGPLPAPVGRTLVARHPDGSIFEYVDRNPMA
>NZ_CP029823.1|WP_099015343.1|3151461_3151920_-|hypothetical-protein
MRRVHDPGADPEDEGMPDLQDGTPEQQRAGDPEQLPVAGDEPTIAVYRDTTSGETHEREPLEERLTDEEPETGEPVGTEAEPAGLLYDEPDPDLPREQDIYSQEGSTSGLSAEEEAVRIKSDELRDVDDLYDLYEDEEFADEEPTEDPGPPS
>NZ_CP029823.1|WP_099015342.1|3152361_3152757_+|hypothetical-protein
MAEQTHRIGILSSGNIFGRYVTGLARYPELDIVRGPGRPPPGETVCGRAPDSARLPGAPVGPLARRLGGSAEVGRGSQGAPKGRGAVSLCGSAAAVSICGSAAQAIGHDGVAADRRQLSAPPAERLGGRRP
>NZ_CP029823.1|WP_099015341.1|3152783_3155012_-|DUF5107-domain-containing-protein
MATIVRRTTLTLPTAPVGPDNPLPALRPLDEVHHVDDHVRATLPADMARQVAYEPLRSVLPVRLRDGYGRDRAPAELDAIVLENDHLRATVLPGLGGRVHSLIHKSPGTSADRELLYRNPVLQPADFALNGAWFSGGIEWNIGATGHTTLSCSPLHAARVPAPDAADGGAMVRLWEWERLRDLPFQVDLWLPADSAYLYVGVRIRNPHHLPAPVYWWSNIAVPEDEHTRVLAPADDAWHFGYARTLSKVPVPEWDGADRTYPLRGAYPADYFYELPEDARRWIASLDADGSGLVQTSTDLLRGRKLFVWGAGPGGRRWQQWLTEPGTGGYAEIQAGLARTQLEHIPLEADEEFAWLEAYGPLAADPAAVHGTDWAAARHETETRLEAALPRAAVDAAYAAWRPHADAEPAERLATGSGWGALEVERGGFQLPGTPFDPGTLGEEQEPWRRLLRSGALPDWEPGPSQADPGASLVAPAWRDLLEAAPSTAAAEYHLGVAQWHAGDRAQAERSWERSLRCAETPWALRCLAVADTAAGHPARAAERLLRAVRLLLASAAAVPPPEEAAPVIEAAGTGQESGAGAGQGPEPVPGAGQGTAVSLAAPPVAVEPVDPEAADPEAAEAAEAALGREAIVALLAADRADDARAVLDALRPTIRARGRFRLLRAQVLLAQGDAPAARAVFDEGFEVCDLREGDEALSDTWYAIVERLAAGLEEPLTEEARAQARAEHPLPAPYEFRMRPA
>NZ_CP029823.1|WP_069867022.1|3155304_3155859_-|GNAT-family-N-acetyltransferase
MPDVRYVTQGTRAAIRRTTREDGAEFVRLARESAAFHRPWLTLPTTERAYLHYIGQLEREDREGFLVCVRETGDIAGFININNIVRGAFQCGSIGYGAFPPAAGQGYMSEGLGLVLRHAFGPLGLHRVEVNIQPGNKASIGLVKRHGFRLEGFSPDFLYIEGAWRDHERWAMTSDMLDQRTGAG
>NZ_CP029823.1|WP_099015340.1|3155851_3156595_-|4'-phosphopantetheinyl-transferase-superfamily-protein
MTTSPAPRIVGREPLPAAVADGWPQGGEPETWLLSVSRYTAAMDAGAPGTILDAEERERAGKFLRAEDRERYTAAHLGLRELLGAYLGISPADVPFTREACPGCGGPHGRPAVSGTPLHFNMSHAGDLVLFAFASTPVGVDVEKLQPASVVDQVAESLHPKERAELDALAPAGRSAAFARCWTRKEAYLKGLGTGLSRDPAVNYVGTGLSPVPVGPWEMTDIPVDGAIPGGSGYAAAMALLSSLPHA
>NZ_CP029823.1|WP_099017155.1|3156591_3158703_-|S9-family-peptidase
MQQQTVVTAPYGAWPSPVDAALVASHDGHPEYVGTVGEEVWWTAPRPGEGGRRALIRRRTDGAEVPVLAPPWNVRSKVMGYGGMPWAAVDRVRSVPLVVFVHFADQRLYIHEPDAPGGGAPRPLTPLSAVGEGLRWADPVLHPERGEVWCVLEEFTGPEPTDVRRVIAAVPLDGSAAGDRSAVRELTDDRHRFVTGPRLSPDGRRAAWIVWDHPRMPWDGTEVMLADVAEDGSFGGARAVLGGPEESVAQIEWAEDGALLVATDRTGWWNLHRLEPHVLEPHRPEPHRPETSAEAAGGREGALGGRPVELCPREEEFAGPLWKLGHRWFAPLAGGLIAVLHGRGAPVLGVLDPRTGELADVPGPWTEWEPALAVNGTRVVGVAASPYSGHEVVELDVCTGRSRVIGSAHADAVDPAYYPRPLARTFTGPDGREIHAQLYPPHHPGHTAPDGELPPYVIWAHGGPTGRAPLVLDLEIAYFTSRGIGVAEVNYGGSTGYGRAYRERLRERWGVVDVEDCAAVAGALADEGIADRARLAIRGGSAGGWTAAASLTATDLYACATVSYPILDLVSWAAGGTHDFESRYTESLVGPFAEVADRYRERSPLHRADRVGSPFVLLQGLDDTICPPEQCERFLEAVAGRGVPHAYLTFEGEGHGFRRADTMIRALEAELSLYIQTFGLIRSDVPTLELLKSAVPNSTGGAS
>NZ_CP029823.1|WP_099015339.1|3158711_3160052_-|M20/M25/M40-family-metallo-hydrolase
MADTDRPEAIDAQALDEVVRFTSDLIRIDTTNRGGGDGSERAAAEYVAEMLGDVEIEPTLLERSPGRTNVVARIEGTDPSAPALLVHGHLDVVPAEPADWTVHPFSGEVRDGVVWGRGAIDMKNMDAMVLAVVRAWARAGVRPRRDIVLAFTADEEDSAAWGSGFLAESHAELFEGCTEGISESGAFTFHAGPGMRIYPIASGERGTAWLKLTAHGRAGHGSKVNRDNAVSRLAAAVARIGEHRWPVRLTPTVKAALTELAELQGVTADVDAPGFDVDALLAKLGPAAALIEPTVRNSANPTVLEAGYKVNVIPGSATAYVDGRLLPGCEEEFHDTLDRLTGPDVEWEFHHREPPLEAPMDTPTYRAMRAAVEHFDPGARAVPYCMSGGTDAKQFSRLGIAGYGFSPLRLPEGFDYQALYHAVDERVPVEALHFGVRVLDHFLQRA
>NZ_CP029823.1|WP_079259403.1|3160044_3160878_-|M55-family-metallopeptidase
MKILISADMEGATGVTWPADVLPGTPQWERCRRLFTSDVSAAVAGFLEGGADEVLINEAHWSMRNLLLEELDDRAQMLTGRHKSLSMVEGVQHGDVDGMAFVGYHTGAGTEGVLAHTYLANSITGVWVNGARASEGRLNTLVAAEYGVPVVLVTGDDKTCEDAGDYAPQARSVAVKDYVSRYAAVCRTPARTAADIRAAAREAAVLAVRHEPARGGPFTVELEFDAEHLVGAASVVPGVERSGERRVAYTSPTMYEGIRCFKAVTTVVSAAVEEQYG

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Crispr_ID: NZ_CP029823_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_3

3976169-3976317

Orphan

Consensus_repeat	Method
GGCGTCTCTCCGTTCGCTTCTCCGCCCGCGCGGCGCAGAGGTGCGGCTTCCAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP029823_3

>merge|NZ_CP029823|3|3976169-3976317|CRISPRCasFinder
GGCGTCTCTCCGTTCGCTTCTCCGCCCGCGCGGCGCAGAGGTGCGGCTTCCAACATCATCCGCGGCCCGGCGGCCGCTCGCGCGTCGCTCACAGGGGCGTCTCTCCGTTCGCTTCTCCGCCCGCGCGGCGCAGAGGTGCGGCTTTCAAC

>NZ_CP029823|3|3|3976169-3976317|CRISPRCasFinder
GGCGTCTCTCCGTTCGCTTCTCCGCCCGCGCGGCGCAGAGGTGCGGCTTCCAAC	ATCATCCGCGGCCCGGCGGCCGCTCGCGCGTCGCTCACAGG
GGCGTCTCTCCGTTCGCTTCTCCGCCCGCGCGGCGCAGAGGTGCGGCTTTCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_099017106.1\|3976351_3977845_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_CP029823.1\|WP_099017107.1\|3972028_3973519_+\|M81-family-metallopeptidase	unknown	unknown	gnl\|CDD\|377823
NZ_CP029823.1\|WP_099015045.1\|3974408_3975914_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP029823.1\|WP_069866565.1\|3969248_3969482_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_069866573.1\|3975928_3976168_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_069866579.1\|3980752_3982975_-\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP029823.1\|WP_099015048.1\|3964326_3965502_+\|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|369642
NZ_CP029823.1\|WP_079259081.1\|3985037_3985565_-\|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl\|CDD\|367590
NZ_CP029823.1\|WP_069866583.1\|3984204_3984894_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181298
NZ_CP029823.1\|WP_099017105.1\|3987170_3988220_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP029823.1\|WP_099015046.1\|3969599_3971900_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_CP029823.1\|WP_099015049.1\|3963024_3964023_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381302
NZ_CP029823.1\|WP_099015050.1\|3961949_3962888_-\|2-hydroxyacid-dehydrogenase	unknown	unknown	gnl\|CDD\|240643
NZ_CP029823.1\|WP_069866577.1\|3978349_3980461_-\|bifunctional-diguanylate-cyclase/phosphodiesterase	unknown	unknown	gnl\|CDD\|238923
NZ_CP029823.1\|WP_099015044.1\|3985805_3987167_-\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|340817
NZ_CP029823.1\|WP_087684298.1\|3982990_3983944_-\|methionine-synthase	unknown	unknown	gnl\|CDD\|239426
NZ_CP029823.1\|WP_099015043.1\|3988316_3990068_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|215135
NZ_CP029823.1\|WP_142881364.1\|3973560_3973905_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_069866575.1\|3977850_3978147_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_CP029823.1\|WP_099017108.1\|3965938_3969223_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_099017106.1\|3976351_3977845_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP029823.1\|WP_099017107.1\|3972028_3973519_+\|M81-family-metallopeptidase	gnl\|CDD\|377823	pfam07364, DUF1485, Metallopeptidase family M81. This is a family of proteobacterial metallo-peptidases.	1.59507e-120
NZ_CP029823.1\|WP_099015045.1\|3974408_3975914_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP029823.1\|WP_099015048.1\|3964326_3965502_+\|PQQ-dependent-sugar-dehydrogenase	gnl\|CDD\|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	3.71657e-91
NZ_CP029823.1\|WP_069866579.1\|3980752_3982975_-\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP029823.1\|WP_069866577.1\|3978349_3980461_-\|bifunctional-diguanylate-cyclase/phosphodiesterase	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.9851e-100
NZ_CP029823.1\|WP_079259081.1\|3985037_3985565_-\|TIGR00730-family-Rossman-fold-protein	gnl\|CDD\|367590	pfam03641, Lysine_decarbox, Possible lysine decarboxylase. The members of this family share a highly conserved motif PGGXGTXXE that is probably functionally important. This family includes proteins annotated as lysine decarboxylases, although the evidence for this is not clear.	1.12096e-38
NZ_CP029823.1\|WP_069866583.1\|3984204_3984894_-\|SDR-family-oxidoreductase	gnl\|CDD\|181298	PRK08219, PRK08219, SDR family oxidoreductase.	9.10752e-109
NZ_CP029823.1\|WP_099015046.1\|3969599_3971900_-\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	1.31624e-91
NZ_CP029823.1\|WP_099015049.1\|3963024_3964023_+\|aldo/keto-reductase	gnl\|CDD\|381302	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR). Schizosaccharomyces pombe aldo-keto reductase YakC is a founding member of aldo-keto reductase family 13 member A1 (AKR13A1). It catalyzes the reversible reduction of ketones to the respective alcohols using NADP(+) as a hydride donor. Rauvolfia serpentina PR is a founding member of aldo-keto reductase family 13 member D1 (AKR13D1). It catalyzes the NADPH-dependent reduction of the aldehyde perakine to yield the alcohol raucaffrinoline in the biosynthetic pathway of ajmaline in Rauvolfia, a key step in indole alkaloid biosynthesis. This family also includes Arabidopsis thaliana aldo-keto reductases, ALKR1-6.	1.28432e-130
NZ_CP029823.1\|WP_099015050.1\|3961949_3962888_-\|2-hydroxyacid-dehydrogenase	gnl\|CDD\|240643	cd12166, 2-Hacid_dh_7, Putative D-isomer specific 2-hydroxyacid dehydrogenases. 2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	4.53917e-146
NZ_CP029823.1\|WP_099015044.1\|3985805_3987167_-\|glycosyltransferase-family-1-protein	gnl\|CDD\|340817	cd03784, GT1_Gtf-like, UDP-glycosyltransferases and similar proteins. This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.	9.77916e-56
NZ_CP029823.1\|WP_087684298.1\|3982990_3983944_-\|methionine-synthase	gnl\|CDD\|239426	cd03310, CIMS_like, CIMS - Cobalamine-independent methonine synthase, or MetE. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers both the N-and C-terminal barrel, and some single-barrel sequences, mostly from Archaea. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Side chains from both barrels contribute to the binding of the folate substrate.	5.67876e-66
NZ_CP029823.1\|WP_099015043.1\|3988316_3990068_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|215135	PLN02244, PLN02244, tocopherol O-methyltransferase.	1.99673e-21
NZ_CP029823.1\|WP_099017105.1\|3987170_3988220_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	9.79234e-24
NZ_CP029823.1\|WP_069866575.1\|3977850_3978147_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	1.55747e-36
NZ_CP029823.1\|WP_099017108.1\|3965938_3969223_-\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	7.83619e-37

>NZ_CP029823.1|WP_069866573.1|3975928_3976168_-|hypothetical-protein
MSAIKKAKGFKKSKPGTYLSIATSLFGAVSVAKQVKKARFENDRLQLADAVVSAAAIVTGVALLIRELKRMGDDDVLAD
>NZ_CP029823.1|WP_099015045.1|3974408_3975914_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MTVTELVSYEDALAAYDPVMGLEVHVELGTKTKMFCGCSTALGAEPNTQTCPTCLGMPGSLPVVNAIGVESAIKIGLALNCEIAEWCRFARKNYFYPDMPKNFQTSQYDEPIAFNGYLDVDVDGEVFRVEIERAHMEEDTGKSTHVGGATGRIHGAQHSLLDYNRAGIPLIEIVTKPIVGAGAKAPEVAKAYVTELRELIKSLGVSDARMEMGQMRCDVNLSLRPQGADKFGTRSETKNVNSLRSVERAVRFEIQRHAAVLGDGGTIIQETRHFHEEDGSTTSGRVKEEAEDYRYFPEPDLVPVAPARTWVEELRGGLPELPRVRRNRLREEWGLSRHEMQSVLNAGAIELITATIDEGAPADQARKWWMGELARRANEDGVELTALPITPAQVARVCALVKEGSLNDKLARQTIEGVLAGEGGPDEVVAARGLKVVSDEGALGTAVDEAIAANAAIADKIRGGKVAAAGALVGAVMKATRGQADAARVRELILEKLGVEG
>NZ_CP029823.1|WP_142881364.1|3973560_3973905_-|hypothetical-protein
MNVCTGGLFAMGAAARRAGRNASVAPWAIPPGPGAEPQFREGAVVERRLAGEPGAGACAGRAPFGAGGEGVNVCTGGLFAMGAAARRGRAERLGGTLGHPAGAWGGAPVSGRGG
>NZ_CP029823.1|WP_099017107.1|3972028_3973519_+|M81-family-metallopeptidase
MTPAASRARRPRIGIGGMHIESSTFSPHRAAYDDFRVTRGAELLDRYAWTRPDGELTGRAEWVPLLHAVSLPGGPVERATYDRIKGELIERLRRAGPLDGLVYDIHGAMSVVGLEDAEGDLTDAVREAIGPDALISAAMDPHGNVSRRFASRLDLITAHRLAPHEDAWETRERAARKLVERLASGRGRPHLAWVQIPVLLPGERTSTRLEPAKSLYGRLAAVEAMDGVVDAAMWVGYAWADEPRCRAAVVVTGDDPVLAVEQTRSLAREYWEVRHDFAFVGPTGGADECIAEAVASCARPFLISDSGDNPTAGGAGDLAYMLGRLLANEDLAAGRATALHPGITDPAAVAACFAAGPGATVRLSVGGGISRGTADHAEPYDLTGEVVALRRNDPVGGDLAAVRRGGVTVILVSRRKPFHTRADFGELDPCGYDLVVVKIGYLEPELYDLAADWRLALTPGGVDQDLTRLGHRRIARPLYPFDDEGFEVPHLEPLLL
>NZ_CP029823.1|WP_099015046.1|3969599_3971900_-|MMPL-family-transporter
MAALARWCLRRRAIVIVLWLAAFAGVAAAAAVTGSAYSNNYDIPGTDSSKATALMEQRLPERAGDSDTIVWHTADGAGTVRGPGVERRMTEALRQVADLPGVASVAGPYGADDTSRISADQHTAYATVVFREPAADLGGAEVRQVLDTVRSAASGARGLEVEMGGEGASLTERTGPAHLSEAIGVAVAAVVLFLAFGSLAATLLPIATALIGVGTAYAAIGLLGHAMTIADFAPMLGMLIGLGVGIDYALFIVTRHRKGLRQGLSVERAAQRAVATSGRAVVFAGATVCLALLGMLVLRLSFLNGVAVAAALTVALTVAASLTLLPALLGLIGMRALSRRERRRLAERGPEAMSTQGLCARWAVLVERRPKLLGAAAAVLIAVLALPTFSLHLGTSDQGNGPSTSTTRRAYDLLADGFGPGFNGPLTLMGSIDGADDRMAFTRLPETLRTIDGVASVSAADLSGGGDTGVITVVPETAPQSRATSELVGRLRAQVLPRAEEGSSLRVYVGGLTAGYDDFAAVIVSKLPLFVGVVVALGCVLLLLAFRSIGIPIKAAVMNVAAVASSFGVVVAIFQWGWGSDLLGLGRAGPIEPFLPVIMVSVLFGLSMDYQVFLVSRMYEEWQRTRDNRTAVRVGLAETSRVINSAAVIMIAVFSAFVLSGDRIIAMFGIGLAAAVALDAFVLRTLLVPALMHLLGGANWWLPGWLERLLPRISIEGEGDGTGGGGVGAEGGGDGSPSGPASVPVALPGQAVNGSERAGTARSPVS
>NZ_CP029823.1|WP_069866565.1|3969248_3969482_-|hypothetical-protein
MDAFHETLVTRENAMLHHELHRIREAELLREAAAQRLVREAARSRGGRSAEHEGGGRVRPVRRWRGHRSSRSYRTAA
>NZ_CP029823.1|WP_099017108.1|3965938_3969223_-|AAA-family-ATPase
MGAGAGAGTGAGADAVRAGTRAGAGAGTRAGADAAGAGKAGAAVSGPCAMLDDVHTTSVSPVFIGRAQELATLEDALARATAGEPQVLLVGGEAGVGKTRLIDEFLASAVAAGAVAAVGGCVEIGADGLPFAPVSTVLRSLRRKLGGELDGAAAGQEGELARLLPELGETARASHDEEGRARLFELTVRLLERLAAERTLVVAIEDLHWADRSTRELLGYLFRSLLSARLLVVATYRSDDIHRRHPLRPFLAEVDRMREVRRIELSRFTRVEVHAQLTGINGAEPERDLLDRIFKRSDGNAFFVEEIARSINEGCRTGLSESLRDLLLVRVEALSEEAQRVVRILAEGGSSVEYELLRAVARLGEDELIDALRAAVGANILRPTADDSGYRFRHSLVREAVRDDLLPGERSRLNRRFAEALEAEPALVRADERAARLASYWYHAHDPAKALPAVLQASVEARRRYAHAEQLRLLERALELWEDAPKEIREAQRPMDYAEVYPACGCADQALRQLDLLAEVVVAAHMSGQLERALAISKRALRTLDRSGHDPLRAAWFWTQRCKLMASLARGDGWEELSRAQELVRGLPPSPVHAEVMSQVAGWTMTHRPGPEGMAAAERAVELARLVGAESTELNARLTLAYFTVDSGDIERGLAEMREVCGRAVALGDISVLGRCYVNLTSALEGVGRSAEAVETAEEGGRILDRVGLVDSRAWLFGNLAESLFSLGRWDEAEAAALKTLRLALGTKPRGTAANRLARLALVRGDWGTAERESAATREHYGARNTEPQYTLKVAGQAIELAAARGRILEVRALLEQAVAAGFPPGMQRYLWPLLCEAAAAESAARGLPTAEPGRGEALARLRVAVKRVPQPVPVWRAHAAMLQAELERAEGRDRPALWAEATAAFAALDRPYPLARARHRWAEALLAPGRGAAPAQADREHAAELLAQAHAVADRLGARPLREEIELLARRARLPLASAATRAPLDASPPHTPALPPAPGASAAASEPAEPDHPADPAEELGLTPRERDVLRLVAAGRSNRQIAEELFISPKTASVHVSNILAKLRVSGRTEAAAVAHRLRLVDGLTDGTPAR
>NZ_CP029823.1|WP_099015048.1|3964326_3965502_+|PQQ-dependent-sugar-dehydrogenase
MRRPRVTSVLAAAAAVLLMAGCSSDGDSIIRPGGRSSSPTKPDGGGSSSGAPSPKESAAPAKGSVKVVRTLTTKLKSPWGLAPLPGGDLLVSSRDTGKIFKISADTGKKTELGSVPGVSASGEGGLLGLAVSSDFGSDHMVYAYFTTDSDNRIARMVYDDRRPAGDQLGAPDTLFKGIPKGTIHNGGRIAFGPDKMLYAGTGENGDGGLAQDMDSFGGKILRMTPEGEPAPRNPDAQSVVYSWGHRNVQGLAWDADKRLWASEFGQDTWDELNQIQPGKNYGWPEAEGKADKKGFADPVEQWKPKDASPSGIAFAKGSIWMAGLRGERLWRIPLKGAKPVAKPQSFLDGKYGRLRSVAAADDGGLWLATSDTDGRGRPDRQDDRILRLEVR
>NZ_CP029823.1|WP_099015049.1|3963024_3964023_+|aldo/keto-reductase
MERRRIGAAALEVGAIGLGCMPMSWAYTASQRSGEHSVRTVHTALDSGASLLDTADMYGPFTNELLVGRVLKERRADAFVSTKCGLLVGEQHIVANGRPGYVKRACDASLRRLQTDVIDLYQLHRADPEVPIEETWGAMAELVAAGKVRALGLCAVGARAQRRTGARMHDATVRQLERVQQVFPVSCVQAELSVWSPDALEALVPWCASRGVGFLAAMPLGNGFLSGTLTPGQGFEPDDMRARHPRFTAEMMAANQPIVAGLRRVAQRHGDGVAPAQVALAWLLAQGPHVVPVPGTKRERWAAENCAAADLPLSHEDLAEIAELPPARGSWD
>NZ_CP029823.1|WP_099015050.1|3961949_3962888_-|2-hydroxyacid-dehydrogenase
MRDLVWLPIPPEEIDGLPDTLEYAHWDGGPDFPTDPARCAFYCVPYMKPPQVCTRPLPAMANLRVVQTLTAGIDHIKPALADLAPGVRLCNARGVHDASTAELALTLILASLRGIPDFVRGQDAEEWRSGFRPALADKSVLIVGYGAIGSAIEDRLVPFECERVMRVARSPRTTERGPVHPIAELPQLLPDADVVVLVTPLTEDTRGLAGAEFLSRMKDGALLVNVARGGVVDTKALLSEVESGRLRAALDVTDPEPLPTGHPLWHAPGVLISPHVGGPTSAFLPRAKRLLRDQLIRYARGESLAHLVATTG
>NZ_CP029823.1|WP_099017106.1|3976351_3977845_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MTDLTRLTAAEIAARIASGEVTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDEKRERGAELGPLAGVPLALKDIFTTEGIPTTVGSKILEGWIPPYDATVTKRLRDADVIVLGKTNMDEFAMGSSTENSAFGPTGNPWDLTRVPGGSGGGSSASLASFQAPLAIGTDTGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHAVIAGHDPMDSTSIDEPVPDVVEAARNGSVRGMRVGVVKEFAGEGYQAGVMQRFNETVELLRELGAEIEEISCPSFDKALAAYYLIAPSECSSNLARFDAMRYGLRVGDDGTKSAEEVTALTRAEGFGAEVKRRIMLGTYALSSGYYDAYYGSAQKVRTLIKRDFENAFGRVDVLISPTTPTTAFPIGERADDPMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDGLPVGLQIIAPAMADDRLYKVGAAVEAALTEKWGHPLLEEAPTL
>NZ_CP029823.1|WP_069866575.1|3977850_3978147_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MPGITREEVAHLARLARLELKAEELDHFAGQLDDIIGAVARVSEVADQDVPPTSHPLPLTNVMRTDEVRPSLTPQQALACAPAQEQQRFKVPQILGEE
>NZ_CP029823.1|WP_069866577.1|3978349_3980461_-|bifunctional-diguanylate-cyclase/phosphodiesterase
MKPTESAAPASRLRRAVLPALPAAAVAMAAFALGIGVFRVLDAGNALFPDGTVGWSLAVLTGIIVGHLVALGRDRWWGGTGSGAALTLAALLLYGWIPAVLVSLAVVVLVGAARRHRWRQAVLHGAVDILGVGAAALTLAAFGTTPSVERPWRTDTWDVSAIPQTALAAFVYLAVTRALLWCSLAPPGAGLPTLARTALVRQALVGIALLGIAPLIVVVAGDTPLLLPLFAVPLVALDSTLWIARVRAEEQLRDPLTGLPNRQWLLERTWTALDESERAGTRSALVLLDLDRFRSVNDTLGHLAGDRLLLQIAERLRLALPRGAEVARLGGDEFAVLLPTTDSLTSAQRSARVLVGDLGSPLDLDGLTLVLEASAGVAVYPDHALDAEGLLRRADVAMYQAKRDRSGVELYEARRDGNTPDRLGLLGDLRRALDAGDVELHYQPKVGFDGHVAGLEALVRWVHPDRGKVPPDEFISMAESSGLMPRLTEYVLETALGQVARWRADGLEVPVAVNVSPRDVHTPGFAGAVAGRLARHGVPAFALQLEITEHVLLEDPQRAADTLAGLTGHGVKMSLDDFGTGYSSLVHLRRLPVSELKIDRSFVARLAVDNEDAEIVRCTVDLAHSLGLLVVAEGVEDDETWERLRDLGCDAVQGWLVAAAMPPEEMTAWLRARGEGGWHRETAEPSSESASAEADEDADQPVT
>NZ_CP029823.1|WP_069866579.1|3980752_3982975_-|NAD-dependent-DNA-ligase-LigA
MAGEQQSKVPAEARERHARLAEQIEEHRFRYYVKDAPVISDAEFDKLMRELEAQEAEYPSLRTPDSPTQKVAGAYETEFTEVEHRERMLSLDNAFDDEELAAWADRIAKELGSGSYHFLCELKVDGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIAKIPNRLKGDRVPALVEVRGEVFLPRERFEELNAGLVEAGKPPFANPRNAAAGSLRQKDPKVTASRPLDMVVHGIGAREGFDIDRLSQAYELLHEWGLPTAAHFKVVDSIEGVREYIAYYGDNEHRHSVEHEIDGAVVKLDEIPLQGRLGSTSRAPRWAIAWKFAPEEVNTKLVDIRVGVGRTGRVTPYAVVEPITVAGSEVEFATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGSEREFVMPATCPECDTPLQPAKEGDVDLRCPNGRSCPAQLRERIFYLAGRKSLDIENLGYVAAAALTQPLEPAEPPVKDEGDLFDLKIEQLLPIRSYVLDPDSGLPKRDPETGEEKVVTFFATQKGEPKKNALAMLANIEAAKERPLARIITGLSIRHVGPVAATALAREFRSLDRIAEADEEELAAVEGVGPTIAASLKEWFAVDWHREIVEKWRRAGVRLEEEGGEDEGPRPLEGLTVVVTGTLQSYTRDGAKEALQSRGAKVTGSVSKKTDFVVVGDNPGSKYDKAMQVKVPVLDEDGFGVLLEQGPDAAREVAMTPPEEAAEDSPEESGE
>NZ_CP029823.1|WP_087684298.1|3982990_3983944_-|methionine-synthase
MPGGDAREAAKTVTGSLEALPYLPELPARGPGADMIGRTAGMLAELYAHVEPSGWRISDRPGRDTRRARSWLGEDLDALEEFTQGYQGALKVSAVGPWTLAASLELRGGEVALSDPGACRDLTASLAEGVRAHLAEVRRRVPGAEVVLQLDEPSLTSVLRGSVRTASGYRTHGAVDRGVVEGALRTLVEAAGGPVVVHSCAPAVPFGLLRRAGVEGISFDLSLLTEREEESIGEAVEGGTALLIGAVPGTDAPLSDPAGSVGGVRTLWRRLGLSPETLAESVVVTPSCGLAGASPGYARAALAHCVRAARSLADNPE
>NZ_CP029823.1|WP_069866583.1|3984204_3984894_-|SDR-family-oxidoreductase
MGTHLITGAGSGIGAAVTERLAARGEELWLLARDAGRAKELAERFPGVRTVVGDLGDPDRLSWALGHQALPDRLDSLLHIAGVVDLGEVGELTPKAWNRQLAANLVSPAELTRLLLPQLRLAQGHVVFVNSGAGLRANAQWAAYAASKHGLKALADALRWEESGNGVRVTTVYPGRTATPMQVKVHQQEGKEYEAERWIAPETVATTILTVLDLPRDAEITDLQVRPRG
>NZ_CP029823.1|WP_079259081.1|3985037_3985565_-|TIGR00730-family-Rossman-fold-protein
MNICVFCSAADLDDRYTAPAREFAELIGKGGHTLVWGGSDVGLMKVMADGVQEHGGRLVGISVEFLAAKARENADEMVIAKDLAERKAQLLARADAVVIMVGGTGTLDEATEILELKKHGLHIKPVVLLNAAGFYDGLKQQFQRMEQEGFLPRPLSELVFFAENGVEAMTYLESV
>NZ_CP029823.1|WP_099015044.1|3985805_3987167_-|glycosyltransferase-family-1-protein
MRILIVTAGSRGDVAPFTGLGRRLLDAGHEVAVAAHAPFSGLVRGCGLDHRPLPGDPRELIRARGRTASPGEARAVTAAFLDRLADGVVGAVADGTDLVLTAFGPAGLSRAAGEACAVPVIGTYLAPSFATREFPLPGASGAAGGPGALGVHGVPGGPGVPGGPGAPGGPGAPGDGGLGPEGNLAAGRELLVRAGGLQAEVLTRLRARLGLPATASPEPDAEIRPVLHGFSPLVVPRPADWPSQVDVVGYWWPARPRDWQPPAELTDFLEAGPPPVFIGFGSMAPGQGERLGELVTAAVARAGVRAVVQAGWAGLTASGDDVLTVGDLPHDWLFPRTAAVVHHAGAGTTAAGLRAGVPAVAVPAMADQPFWAARLHRLGVAPRPLPLDALTAESLGAAITACVTGTALRRRAADLAEAVAAEDGAAAVLAHIGAVGRGEAGHGDRTSGEPGAS
>NZ_CP029823.1|WP_099017105.1|3987170_3988220_+|MerR-family-transcriptional-regulator
MILLGECRPGHTRTTAVAADANGSCAVEVQAAVTGGTQGGDAMGIGELAARTGLPVKTIRYYSDIGLLPESGRSPGGHRRYAADALPRLQLIQHLRALGTPIAAIAAVMAGERSLDELVTRELDAVREQLRTLTWRRATLRALDGCPEPERLRRLTLLAGVGTPEDAHDHLVRYWRWALPPGLPPRLVRAVVEGAVPVPPAAPTTAAVLAYAELRALATSGDRRRQPQPHQVGDVASFYSGVVDACALAAEALVTGCPDRRAEALGHFVGAYARIGGHDDTPAFRARLRALFRHGARAGSFSLRYWRHALVVTGETPRPSAASGQGHLAAPLAALHHQVAGLPLAADTP
>NZ_CP029823.1|WP_099015043.1|3988316_3990068_-|methyltransferase-domain-containing-protein
MRPGNLGMRPADTGAVVRCLSTGGSVISAQPVQKFGDNPVDVRDTDHYTEEYVPSFVEKWDSLIDWDRRAESEGTFFIDLLRERGVKKVLDVATGTGFHSVRLLEAGFETVSADGSAEMLAQAFSNGLKHGDHILRVVQADWRWLNRDAHGEYDAIVCLGNSFTHLFSERDRRKTLAEFYAMLKHDGILVLDQRNYDAILDRGYSSKHVYYYCGEDVAVEPEYVDEGLVRMRYSFPDESVYHLNMFPLRKDYTRRLMQEVGFQRIETYGDFQHTYREERPDFFIHVAEKEYRTTEAPKPVGSVTGNAEYSGAVGTARDYYNSADADAFYWRVWGGEDIHIGIYDRPDEPIAEASRRTVARMAGQLGLTESSVVLDLGAGFGGSARYLAETYGCRVMALNLSEVENERHRTLNAERGLTEAIEVMDGSFESIPLPDDSVDVVWSQDAFLHSGNRARPLEEAARVLRPGGHLIFTDPMAADGCPVETLRPILDRIHLETMGSPEFYRRELARLGFTEVGGGFQEHREHLITHYARVLEETRHQEADGLAEHVSADYLTHMKKGLSNWVEGGRNCHVTWGIFHFTR

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Crispr_ID: NZ_CP029823_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_4

4019840-4020110

Orphan

Consensus_repeat	Method
TCACCGACCCGCTNGGCGC	CRT

4 spacers

The CRISPR arrays of NZ_CP029823_4

>merge|NZ_CP029823|4|4019840-4020110|CRT
TCACCGATCCGGGCGGCGCGGTGTGGCGGCAGACCTTCGACGCGGCGGGCAACCGCACCACACTCACCGACCCGCTCGCCGCCACCACCCGCTACCTCTACGACACGCACGGAGGTCTGCTCGCCGTCACCGACCCGCTGGGCGCGACGACGCGGGTGCGCTGCGACGGGGCCGGGCTCCCGATCGAGATCACCGACCCGCTGGGAGCCACCACGCGCTACCAGCGGGACGCGTTCGGCCGCACCGTGGCCGAGACGGACCCGCTGGGCGC

>NZ_CP029823|4|1|4019840-4020110|CRT
TCACCGATCCGGGCGGCGC	GGTGTGGCGGCAGACCTTCGACGCGGCGGGCAACCGCACCACAC
TCACCGACCCGCTCGCCGC	CACCACCCGCTACCTCTACGACACGCACGGAGGTCTGCTCGCCG
TCACCGACCCGCTGGGCGC	GACGACGCGGGTGCGCTGCGACGGGGCCGGGCTCCCGATCGAGA
TCACCGACCCGCTGGGAGC	CACCACGCGCTACCAGCGGGACGCGTTCGGCCGCACCGTGGCCG
AGACGGACCCGCTGGGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_099015034.1\|4015519_4016047_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP029823.1\|WP_099015033.1\|4016141_4016864_+\|DUF4386-domain-containing-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_093702881.1\|4008162_4008861_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379324
NZ_CP029823.1\|WP_099015025.1\|4031412_4032627_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|380079
NZ_CP029823.1\|WP_099015037.1\|4009312_4010440_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NZ_CP029823.1\|WP_099015030.1\|4025059_4026475_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099015029.1\|4027765_4028074_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_142881365.1\|4022252_4022615_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_142881366.1\|4022777_4023311_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099015031.1\|4023392_4024739_-\|diacylglycerol-kinase	unknown	unknown	gnl\|CDD\|224513
NZ_CP029823.1\|WP_069866621.1\|4012472_4013855_+\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|273233
NZ_CP029823.1\|WP_069866612.1\|4006158_4006956_-\|enhanced-serine-sensitivity-protein-SseB	unknown	unknown	gnl\|CDD\|379654
NZ_CP029823.1\|WP_069866619.1\|4011018_4012284_+\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
NZ_CP029823.1\|WP_069866618.1\|4010612_4010993_+\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP029823.1\|WP_069866912.1\|4007067_4007850_-\|enhanced-serine-sensitivity-protein-SseB	unknown	unknown	gnl\|CDD\|379654
NZ_CP029823.1\|WP_099015036.1\|4014002_4014560_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP029823.1\|WP_069866641.1\|4028180_4028411_-\|EF-hand-domain-containing-protein	unknown	unknown	gnl\|CDD\|238008
NZ_CP029823.1\|WP_099015026.1\|4030488_4031256_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|180295
NZ_CP029823.1\|WP_099015028.1\|4028571_4029198_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|376556
NZ_CP029823.1\|WP_099015027.1\|4029707_4030211_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_099015034.1\|4015519_4016047_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	8.78613e-19
NZ_CP029823.1\|WP_099015025.1\|4031412_4032627_-\|L,D-transpeptidase	gnl\|CDD\|380079	pfam17964, Big_10, Bacterial Ig domain. This entry represents a bacterial Ig-like domain found associated with transpeptidase domains.	1.28585e-75
NZ_CP029823.1\|WP_093702881.1\|4008162_4008861_-\|AAA-family-ATPase	gnl\|CDD\|379324	pfam13671, AAA_33, AAA domain. This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.	3.61395e-07
NZ_CP029823.1\|WP_069866912.1\|4007067_4007850_-\|enhanced-serine-sensitivity-protein-SseB	gnl\|CDD\|379654	pfam14581, SseB_C, SseB protein C-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This presumed domain is found at the C-terminus of SseB proteins.	5.76196e-30
NZ_CP029823.1\|WP_099015027.1\|4029707_4030211_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	6.24205e-18
NZ_CP029823.1\|WP_099015031.1\|4023392_4024739_-\|diacylglycerol-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	2.90301e-30
NZ_CP029823.1\|WP_099015026.1\|4030488_4031256_-\|enoyl-CoA-hydratase	gnl\|CDD\|180295	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional.	1.01447e-78
NZ_CP029823.1\|WP_069866621.1\|4012472_4013855_+\|L-serine-ammonia-lyase	gnl\|CDD\|273233	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form. This enzyme is also called serine deaminase and L-serine dehydratase 1. L-serine ammonia-lyase converts serine into pyruvate in the gluconeogenesis pathway from serine. This enzyme is comprised of a single chain in Escherichia coli, Mycobacterium tuberculosis, and several other species, but has separate alpha and beta chains in Bacillus subtilis and related species. The beta and alpha chains are homologous to the N-terminal and C-terminal regions, respectively, but are rather deeply branched in a UPGMA tree. This enzyme requires iron and dithiothreitol for activation in vitro, and is a predicted 4Fe-4S protein. Escherichia coli Pseudomonas aeruginosa have two copies of this protein. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	0
NZ_CP029823.1\|WP_069866612.1\|4006158_4006956_-\|enhanced-serine-sensitivity-protein-SseB	gnl\|CDD\|379654	pfam14581, SseB_C, SseB protein C-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This presumed domain is found at the C-terminus of SseB proteins.	6.3975e-19
NZ_CP029823.1\|WP_069866619.1\|4011018_4012284_+\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP029823.1\|WP_069866618.1\|4010612_4010993_+\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	2.26886e-59
NZ_CP029823.1\|WP_099015037.1\|4009312_4010440_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP029823.1\|WP_099015036.1\|4014002_4014560_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	2.3608e-13
NZ_CP029823.1\|WP_069866641.1\|4028180_4028411_-\|EF-hand-domain-containing-protein	gnl\|CDD\|238008	cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.	4.04045e-14
NZ_CP029823.1\|WP_099015028.1\|4028571_4029198_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|376556	pfam01510, Amidase_2, N-acetylmuramoyl-L-alanine amidase. This family includes zinc amidases that have N-acetylmuramoyl-L-alanine amidase activity EC:3.5.1.28. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls (preferentially: D-lactyl-L-Ala). The structure is known for the bacteriophage T7 structure and shows that two of the conserved histidines are zinc binding.	1.87213e-37

>NZ_CP029823.1|WP_099015033.1|4016141_4016864_+|DUF4386-domain-containing-protein
MPTTTPRTSPTPATRTAPGERAPGRRPQGGPPLLAPVLAFAVLTVGYVVVNSSTPHPDASGKEVLTYARDNGSTIELGSLLLFAAATPLALLAAVLYRRLRALGITAPGSAITLVGGVLAAAALSGSALFGWAGGRLPMDADPALARALADLSFLSGGVAYSATFAMLVSGISVTGLMARLLPRPLTWTGLALAAAGMVSMLTLIADPFGYLLPVVRFGGLIWLVITAILLPRTRPSRHQ
>NZ_CP029823.1|WP_099015034.1|4015519_4016047_-|MarR-family-transcriptional-regulator
MTNEGDRPPGPPPTGAAFLLAQLGAHAADLFAERLATLDLTPAQSGLLRLLAGSPGRSQRELADDLGMPPSRFVAFADELEQRGLIERRRNPVDRRLYAVHLTDEGGTLLAQLRQVGAEHERLMTEGLSEPEREQLTGLLRRLAERQGLSPGVHPGFRSMRAERAGRRKGVPGNR
>NZ_CP029823.1|WP_099015036.1|4014002_4014560_+|carboxymuconolactone-decarboxylase-family-protein
MARIPLTPPSTLLNRLGAWYSRRTYGKVLDPGLAVGHNPRVLLTYVRTERGAAKWNRLDPGLKHLAVMAAAARINCSWCMDFGHWEADALGLPMDKISRVPRWRDHRDAFTDLELLVLDYAEAMTETEPRVTDELAATLIERLGEAAFVELTAMVALENYRSRVNSAFGLTSQGFSDSCAVPSRA
>NZ_CP029823.1|WP_069866621.1|4012472_4013855_+|L-serine-ammonia-lyase
MAISVFDLFSIGIGPSSSHTVGPMRASRMFVRRLKNEGLLAHTTSVRAELFGSLGATGHGHGTPKAVLLGLEGHSPRTVDVETADDEVERIRSTKRLRLLGAEIGPGQEIDFDPSAQLILHRRRSLPYHANGMTLCAYDAEGHPLLEKTYYSVGGGFVVDEDAVGEDRIKLDDTVLTHPFRTGDELLRLSQETGLSISALMLENEKAWRTEQEIRAGLLEIWHVMEKCVARGMSREGILPGGLKVRRRAATAARALRSEGDPAPRAMEWVTLYAMAVNEENAAGGRVVTAPTNGAAGIIPAVLHYYTRFVPGADEDGVIRFLLAAGAIGMLFKENASISGAEVGCQGEVGSACSMAAGGLAEVLGGSPEQVENAAEIGMEHNLGLTCDPVGGLVQIPCIERNGMAGVKAVTAARMSLRGDGRHHVSLDKVIKTMKQTGADMKVKYKETARGGLAVNVIEC
>NZ_CP029823.1|WP_069866619.1|4011018_4012284_+|serine-hydroxymethyltransferase
MSLLNSSLHELDPDVAAAVDAELHRQQSTLEMIASENFAPAAVMEAQGSVLTNKYAEGYPGRRYYGGCEHVDVVEQIAIDRVKELFGAEAANVQPHSGAQANAAAMFALLSPGDTILGLNLAHGGHLTHGMKINFSGKLYNVVPYHVDAETGLVDMDEVERLAKEHRPKLVIAGWSAYPRQLDFAAFRRIADEVGAYLMVDMAHFAGLVAAGLHPSPVPHAHVVTTTTHKTLGGPRGGVILSTAELAKKINSAVFPGQQGGPLEHVIAAKAVSFKVAASSAFKERQERTLEGAKILAERLTQPDVREAGVAVLSGGTDVHLVLVDLRDSELDGRQAEDRLHEVGITVNRNAIPNDPRPPMVTSGLRIGTPALATRGFTADDFREVADVIAQTLKPSHDAEALKARVTALADKHPLYAHLSK
>NZ_CP029823.1|WP_069866618.1|4010612_4010993_+|glycine-cleavage-system-protein-GcvH
MSNPQQLRYSKEHEWLSAADEDGVSTIGITEFAANALGDVVYVQLPDVGSAVTAGETCGELESTKSVSDLYAPVSGEVTEINEDVVNDPALVNSAPFEGGWLFKVRVANEPEELLSADEYTAFAEN
>NZ_CP029823.1|WP_099015037.1|4009312_4010440_+|glycine-cleavage-system-aminomethyltransferase-GcvT
MTDAPPTPRRTALDARHRALGATMTDFAGWEMPLRYGSERDEHTAVRTRAGLFDLSHMGEISLIGPRAGQALDHALVGRLSALAVGRARYTMICDTEGGILDDLIVYRLGDEEFLVVANAANAQVVLDALTERASGFETAVRDDRDAYALIAVQGPESPGILKRLTDADLDGLKYYAALPGTVAGVPAMIARTGYTGEDGFELFLAPDDAERVWDALTEAGAPVGLVPCGLSCRDTLRLEAGMPLYGHELTSDTTPFDAGLGRVVKLDKPGDFVGRQALEAASRQADTVSPRALVGLIAEGRRVPRAGYAVVAADGSRIGQVTSGAPSPTLGKPIAMAYVDVEYAKPGTEGVSVDIRGTREPYEVVALPFYRRER
>NZ_CP029823.1|WP_093702881.1|4008162_4008861_-|AAA-family-ATPase
MHGQETHATTQRLLPARRGRTPSGSTARPGRRAPVHDLRDEARDGGAGTRELRFPAGDVLVASGLPGSGKSTLINRTVPLLDETGSVVIRVDSQNTREAWERRLPGWLPYALYRPLVRYTHYAGLRRALRSNVSVVVHDCGALPWVRRWLARDVRRRGRSLHMVLLDVDGAVALEGQAARGRGVSGYAFGRHLRAMRGLITGIEEGRPPEGCASAVLLDRSTASALRCISFE
>NZ_CP029823.1|WP_069866912.1|4007067_4007850_-|enhanced-serine-sensitivity-protein-SseB
MAPDHGGFPGGAYAAHPAFPGNELEEVMAASIDVPGAGARIVETLSRSHIWVPLPNGGGPDSPSLDLPTMEIEGGAYVPVFSSEQQFLQLVGSHMSFTVAPAVEFARGLPPQLGIAVNPGGAVVVPLPPPAVRELCRAGRTELDGLAPGGRVRLFEPDWQDEPVDFLAAAGIEFAKDTGVRTARRALASVEGGEPALFVGVQVDAPGPEGQALAVDALGRALGSVPVPWKVQLVLLDVAQGDPVADWMVSRVRPFYDRDL
>NZ_CP029823.1|WP_069866612.1|4006158_4006956_-|enhanced-serine-sensitivity-protein-SseB
MSAGADWGAVAGQVERALQQVAPGRYDAYEALLRAIGEGQVWMLLWHGAPGSPDAQYGNMDVDGLGYAPCVTSAQELAASGWNRAHEVVDGRLIADSLYRDRYGLWLNPHAPGGGVGIPWPDLRRIAGGLDRLPAGPLRLSDPSIDLPQFYALLGQNAHRTAAVRSLRRAWVQPALGAPYLAIGLDLYDTGAAAVQSVRVMMEQSITAVPDGLPVSTVALSDEYDPVAMWMRANARPFFDRDAYGTAPAAPPSYGYGYPPPRPAY
>NZ_CP029823.1|WP_142881365.1|4022252_4022615_+|hypothetical-protein
MRARFTPPRTEDTVMLQGTDTLKEGREYIVLEIFTPYGRSALFRIEFTEGEKPALFDSRVFTVTSTTLPPTWRYTNYETGSFTLCPEPWSRPGFWESYYDHEPSALEVYESEKQKIIAAS
>NZ_CP029823.1|WP_142881366.1|4022777_4023311_+|hypothetical-protein
MDEEIPLYVQRDGQELRWKMTVEGDGPWRLRLESSDGVEATATGDNVFEALRAMRPGLTSKGMAVCCHGARVDVRPSGLSASHGAWMVYVLHLWRPPTVRDLVPTFGYCPAELTGSPEEQDAYWEKHLKSRKNWFNFINPVWWIYLLTASWGRPKRLGLRHTSRRNSGTPTLLDDTP
>NZ_CP029823.1|WP_099015031.1|4023392_4024739_-|diacylglycerol-kinase
MTMTSAAPWTARLALVAGATAVVILLLFAGARSVVLVAVGASGTAVALAGVWWTLAHRGPARVLAAVLAVAAPVAVLVLYVLAGLLWVVLVSLALWTLAVASGRFALAFALAEGTGPRSRGERRVGPSERPFLIMNPRSGGGKAGRLGLPGKAEALGARVAVLDPDRPVDVAGLARRAVEEGADLLGVAGGDGTQALVAGVAAERGVPFVVIPAGTRNHFALDLGLDRDDPSACLDALTDGVELRVDLGFIGERVFVNNASFGAYAAVVQSPAYRDDKVRTTLELLPDLLTHETGPDLVVRAGELVMDRPQAVLVSNNPYRTGDPAGLGRRSRLDSGVLGVLAVTVDSAAQAAGLLRGRNAPGLVSATAGDVVVDTQEPAVPVGVDGEPLTLRTPLHCHIAPGALRVRVPRHRPGVPADRPAMDWRGVRRLALTTVRTAAGRGPRRSH
>NZ_CP029823.1|WP_099015030.1|4025059_4026475_+|hypothetical-protein
MDPSADASGPAEPQPLSGNERQEYERLRGAAAVRHRRLRHAAACVLLVLAVLLSPLAVVATWLHEEITDPHRYVQTVAPIARNPSVQSTVTNRLTKRVVDQVDVPAITAHLARNLNKTGAPSFVVNGTRMLGGPLESALTNAVHRVVHKVIASDQFPLVWDAANRRAHAAVVKVLTGEGTSAVQARGNAIVLDIGTLVDNVKQHLVRAGYEKAAKIPHIDRQFTLVRTDKLDEAQGAMRLLDILGTWLAAVTIVLAALAVWISPAHRLTLLAAGVGTAVMMVALLVGLAVVRGVYLDSVPPSALPRDPAAFIFDTLVRFLRESTRTLLVVAIVTAFATYLYGPGRGARAVRSAAARGTGAIGRGLARGGARTGGFGRWLDVHRAWTTGVVITGGALALVLWNHPTPASVGLVLGIVVGILALLGILAGASGPTANGPAADGPRGSDPAADGPTGSGPAADGPAAGGRDASA
>NZ_CP029823.1|WP_099015029.1|4027765_4028074_+|hypothetical-protein
MSYADLRELRSALTTASDIAFSLDAAPSGPETELLTDALRRALAAAGSLTAEHGSTGCPEHPRGAVDPLYGDPDDPLPPGYGRCLLCNDRRRRASAQRRGWR
>NZ_CP029823.1|WP_069866641.1|4028180_4028411_-|EF-hand-domain-containing-protein
MADIEAARKAFERYDLNGDGQITAAEYKSVMAQLGDPYVTEPVAQAVINAHDANGDGLLTFDEFWAAQNKDGEKTG
>NZ_CP029823.1|WP_099015028.1|4028571_4029198_-|N-acetylmuramoyl-L-alanine-amidase
MEAHGRTPTRRALLRSGAYLATAATGLAATAATATTAHADDRRGRRAAAYPPTHWIPASPSNYRVSSRPTVYPIDFIVIHVTQETFPDAMKIFQDPAKQVSTHYMVASADGYIGQFVREKDVAWHAGNKDYNNRSIGIEHEGWVDDPKWFTDEMYASSAALAAAVCDRFGIPKTRDHIIGHVEVPGADHTDPGPLWDWDRYMRLVNGG
>NZ_CP029823.1|WP_099015027.1|4029707_4030211_-|ATP-binding-protein
MAGLEGMEQPQQRTGTAAVRGAPSIEDDRALRALDLFGNPACEEVRLPSRPESAATARRMAEFVVARDWGLGHQLAEHTVLLVSELVGNAVRHTGARTFGLRMQRRRGWIRVEVRDPSRGLPCLMPVGELDTSGRGLMLVDQLSQRWGVDLLPCGKTTWFEMRVAES
>NZ_CP029823.1|WP_099015026.1|4030488_4031256_-|enoyl-CoA-hydratase
MTVNLEVADGVATFRLDRPPMNALDVATQDRLRELAAEVTRRDDVRAVVIWGGEKVFAAGADIKEMREMDHAAMVARSGDLQESFTAVARIPKPVVAAVTGYALGGGCELALCADFRIAAENAKLGQPEILLGLIPGAGGTQRLARLVGPAKAKDLIFTGRQVKADEALAIGLVDRVVPADEVYDQAHAWAARLARGPAIALRAAKESVDRGLETDLDSGLAIERTWFAGLFATEDREIGMRSFVEEGPGKATFR
>NZ_CP029823.1|WP_099015025.1|4031412_4032627_-|L,D-transpeptidase
MTVRRISGAVRGGRGGLLAPLLGAMLMAVAACGGGGGSDDGGKKDDARPRTPRAVVTIAPKDGAKGVDTDGALKVTSAKGTLSSVKVKDAKGTAVEGKIAQGGKSWRPDAHLRSDTTYTVDAVAKDAHGLTTTEHATFTTLRPKETFVGIYTPEDGSTVGVGMPVSLNFNRGITHPEAVEKGIKVSASPSVPIVGHWFGNDRLDFRPEKYWKPGTKVTLSLDLDGVEGRPGVYGEQRKSVTFTIGRSQISVVDAKSKKMTVKRDGKTIKTIPITSGAPGHETYNGKMVISEKHPVTRMDGATVGFGGEYDIKDVPHAMRLSTSGTFIHGNYWAGRPTFGSSNVSHGCVGLFDQRGGGDSSTPASWFFRKSILGDVVIVKNSHDETIQPDNGLNGWNMSWEKWKA

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Crispr_ID: NZ_CP029823_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_5

4426098-4426189

Orphan

Consensus_repeat	Method
CCCCGCGCCCCTTCCGGGGCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP029823_5

>merge|NZ_CP029823|5|4426098-4426189|CRISPRCasFinder
CCCCGCGCCCCTTCCGGGGCGCCGTCGTGGCTGGTCGCGCCCACGCGGCGGAGCCGCATATCGGCACAGCCCCGCGCCCCTTCGGGGGCGCC

>NZ_CP029823|5|4|4426098-4426189|CRISPRCasFinder
CCCCGCGCCCCTTCCGGGGCGCC	GTCGTGGCTGGTCGCGCCCACGCGGCGGAGCCGCATATCGGCACAG
CCCCGCGCCCCTTCGGGGGCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_099014881.1\|4435649_4436774_-\|epoxide-hydrolase	unknown	unknown	gnl\|CDD\|377658
NZ_CP029823.1\|WP_099014884.1\|4423575_4425732_+\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|366030
NZ_CP029823.1\|WP_069864360.1\|4428127_4429132_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP029823.1\|WP_099014886.1\|4419339_4421298_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP029823.1\|WP_099014888.1\|4415435_4416050_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP029823.1\|WP_099014885.1\|4422114_4422999_-\|N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha--D-glucopyranoside-deacetylase	unknown	unknown	gnl\|CDD\|274584
NZ_CP029823.1\|WP_099017083.1\|4421296_4421494_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_079153056.1\|4434413_4435118_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP029823.1\|WP_099017084.1\|4418206_4419124_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP029823.1\|WP_079258909.1\|4417466_4418210_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_CP029823.1\|WP_069864373.1\|4438949_4439873_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP029823.1\|WP_093704031.1\|4435352_4435550_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099014887.1\|4416108_4417380_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP029823.1\|WP_099014882.1\|4433185_4434313_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|236898
NZ_CP029823.1\|WP_069864354.1\|4423061_4423256_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_069864350.1\|4421749_4422118_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099014880.1\|4437320_4438946_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173853
NZ_CP029823.1\|WP_069864362.1\|4431091_4432069_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP029823.1\|WP_069865491.1\|4429209_4431006_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173871
NZ_CP029823.1\|WP_079258904.1\|4432091_4433159_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_099014881.1\|4435649_4436774_-\|epoxide-hydrolase	gnl\|CDD\|377658	pfam06441, EHN, Epoxide hydrolase N-terminus. This family represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (EC:3.3.2.3) comprise a group of functionally related enzymes that catalyze the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarization of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites which arise during the biotransformation of foreign compounds. This family is often found in conjunction with pfam00561.	1.96043e-61
NZ_CP029823.1\|WP_099014884.1\|4423575_4425732_+\|S9-family-peptidase	gnl\|CDD\|366030	pfam00326, Peptidase_S9, Prolyl oligopeptidase family.	3.0024e-46
NZ_CP029823.1\|WP_069864360.1\|4428127_4429132_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.22834e-82
NZ_CP029823.1\|WP_099014886.1\|4419339_4421298_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	8.29046e-14
NZ_CP029823.1\|WP_099014888.1\|4415435_4416050_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.0687e-62
NZ_CP029823.1\|WP_099014885.1\|4422114_4422999_-\|N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha--D-glucopyranoside-deacetylase	gnl\|CDD\|274584	TIGR03445, mycothiol_MshB, N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase. Members of this protein family are N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase, also called 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, the MshB protein of mycothiol biosynthesis in Mycobacterium tuberculosis and related species. [Cellular processes, Detoxification].	3.97952e-136
NZ_CP029823.1\|WP_079153056.1\|4434413_4435118_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	0.000153734
NZ_CP029823.1\|WP_099017084.1\|4418206_4419124_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.61392e-70
NZ_CP029823.1\|WP_079258909.1\|4417466_4418210_-\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	3.34515e-11
NZ_CP029823.1\|WP_069864373.1\|4438949_4439873_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.49539e-101
NZ_CP029823.1\|WP_099014887.1\|4416108_4417380_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.03871e-49
NZ_CP029823.1\|WP_099014882.1\|4433185_4434313_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	4.85648e-149
NZ_CP029823.1\|WP_099014880.1\|4437320_4438946_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173853	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel/dipeptide/oligopeptide transport systems, which function in the import of nickel and peptides, and other closely related proteins. The oligopeptide-binding protein OppA is a periplasmic component of an ATP-binding cassette (ABC) transport system OppABCDEF consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Similar to the ABC-type dipeptide and oligopeptide import systems, nickel transporter is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, which is the initial nickel receptor that controls the chemotactic response away from nickel. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand binding domains of ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	4.29586e-115
NZ_CP029823.1\|WP_069864362.1\|4431091_4432069_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.20118e-96
NZ_CP029823.1\|WP_069865491.1\|4429209_4431006_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173871	cd08506, PBP2_clavulanate_OppA2, The substrate-binding domain of an oligopeptide binding protein (OppA2) from the biosynthesis pathway of the beta-lactamase inhibitor clavulanic acid contains the type 2 periplasmic binding fold. Clavulanic acid (CA), a clinically important beta-lactamase inhibitor, is one of a family of clavams produced as secondary metabolites by fermentation of Streptomyces clavuligeru. The biosynthesis of CA proceeds via multiple steps from the precursors, glyceraldehyde-3-phosphate and arginine. CA possesses a characteristic (3R,5R) stereochemistry essential for reaction with penicillin-binding proteins and beta-lactamases. Two genes (oppA1 and oppA2) in the clavulanic acid gene cluster encode oligopeptide-binding proteins that are required for CA biosynthesis. OppA1/2 is involved in the binding and transport of peptides across the cell membrane of Streptomyces clavuligerus. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.2897e-144
NZ_CP029823.1\|WP_079258904.1\|4432091_4433159_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.32498e-179

>NZ_CP029823.1|WP_099014884.1|4423575_4425732_+|S9-family-peptidase
MTGQLSFPRQHARTQRFTLGAPRALAVAPDDSRVVFLRSRSGTDRTGLLWVYDLEGRREYPAADPAELLGGAGEELSPEERARRERSREGSAGVVGYAVDAAVERAAFALSGRLFTTDLPAGTTHELRVPGPVVDPRPSPDGRHIAYAADGALRVTGVDGEGDRALAEPEGDTVTYGLAEFIAAEEMDRSRGFWWSPRSDALLAARVDEAPVKRWWIADPAHPGREPAAALYPATGTANAEVRLVLLGLDGSRTEIEWDRENYPYLARVHWSAYGPPLLLVQARDQRSQLYLAVDTGTGRTSTVHVDEDAVWLDLFPGVPAWTEDGRLVRIADEGGARVLMVGDRKLTSSALHVRAVLDIGSDDVLFSASPGAGAPLPERPGEIDVHRAWFRGSGDQGGWEPVGRRPFPAVHSAVRGGEVIALSYTGVERPGVSVEILRPADHGAAERLGELDSYAERPVITARPELVFAGKRDIPCAVLLPSGHREGDGPLPVLMDPYGGPHGQRVVASHNAHLTSQWFADQGFAVIVADGRGTPGRSPAWEKAVRDELAAVTLEDQVEAVTALAERYPLDLGRVAIRGWSYGGYLAALAVLRRPDVFHAGVVGAPVTDWRLYDTHYTERYLGLPDEQPEVYAANGLVTDEGLSGAAGTARPMMIIHGLADDNVVAAHTLRLSSALLAAGRPHEVLPLSGVTHMTPQEQVAENLLLLQVDFLKRSLG
>NZ_CP029823.1|WP_069864354.1|4423061_4423256_-|hypothetical-protein
MALSISMSVLLLIIVFMLVNKAGLKAVHAVVCVLLGFYLASSSVAPTIDDLTTNVADMIGGVKI
>NZ_CP029823.1|WP_099014885.1|4422114_4422999_-|N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha--D-glucopyranoside-deacetylase
MTVLPARRLLLVHAHPDDESINNGATMAKYAAEGAHVTLVTCTLGEEGEVIPPALAHLAADRDDALGPHRIGELATAMDALGVEDHRFLGGPGRYRDSGMMGVPQNDRPGCFWQADLDEAAGHLVAVVREIRPQVLVAYDTNGGYGHPDHIQAHRVAMRAVGLAADPDFRPDLGEPHDIAKVYWNCVPRSAVEEGFARLRAAGRDSLFPGVASVEDVPGVVADTEVTAAIDGTAHAAAKAAAMRAHATQIAVDGPFFALSNDLGQPMFIHEHYRLVKGEAGADREDDLFAGVTA
>NZ_CP029823.1|WP_069864350.1|4421749_4422118_-|hypothetical-protein
MTAPRLGGYVLLAVAGVLVGTAGALVQGAWFPGGLLLALLAVVGLCYGGVKVMGARMGGGVPAGAWTVAVLLLTSARPEGDFLFGAGLGSYAFLLGGMFLGVMCATLPLVPQPPGPPVRLGK
>NZ_CP029823.1|WP_099017083.1|4421296_4421494_+|hypothetical-protein
MTTGGMGRDPGMLILIRVVSVVSVFGSSGLAAARARPSSAAPCGASCAGLGEGYWRDPYGGVPDG
>NZ_CP029823.1|WP_099014886.1|4419339_4421298_-|hypothetical-protein
MRTPVAEDGVPAPRSGGDDDAPERTSALPRVDFPPTPERGVPAEPGGAMEPSEPREKKGGKGDGERTSDWFAPRRPRGGSSATGATPKPPASPAPDTTQGFPAPDVTQGFPSPETTQGFPAPDTTQGFPAPDPTQGFPSPETTQGFPAPQQGGGPVADLPYFTDAQSPSGHPEPTGPTTGPVTGDMYLPPSAPGGGPRDSDLLAPPGPGPASGPFGGDPQTPTGGVGPLGGGGPAAQPPTPPGGSPLSGSLGATTGVGPLNTPADGPSLFRDPDPTPSGGVPPEQISSDTLVSGVPVVPSAGRAKPPSPPVPGGPGAPAPGGDSAPAPSAPKAGKPKKKGRSKVVMAGGLLFVIVGGAYAAGLVMNHADVPNGTTVLGIDIGGTSKEVAVDKLDSALGKRTTDPLTVSVDGQQKEIKPSVAGLALDTEATVRDVAGRDYNPVTVIGSLFGGTHEAEPAVTVDEEKLRDALERLAGDSGTAREGGISFTSGKAVPVYGKEGKGLDVDKAVKAVSEGFQLRAETGRNKAITLPVAVRRPSVSKAEVDRKMKSFAEPAMSDLATVQTDASHSIQFGPDKSLPKILSMRVVDGKLVEHYNLPVLKQLYGSTFDGVLLERGDGSKKPVTPEDVVSALRQALLGTTPGERVGIVGKDN
>NZ_CP029823.1|WP_099017084.1|4418206_4419124_-|ABC-transporter-ATP-binding-protein
MGAPPVVRFEKVNKSYGSVRAVTDLDLALYPGETVALLGPNGAGKSSSLDLLLGLRHPDSGRVEVFGTTPRRAIVRGRVGAMLQSGSLMEEVTVRELVGLACDLHPKGHPVDEVLERAGLAGIASRKVNKLSGGQEQRVRFAFATAGASDLIVLDEPTTGMDVASRQTFWGAMREQAKQGRAILFATHYLEEADAVADRVIVLHRGRVLADGSSAEIKAMAGARRISFELDGPIDRAALGALPALTGVEISGRTVRIRSTDADATVHAVYGLGLYPRGLEVTGLGLEQAFLAITDAATADEESAR
>NZ_CP029823.1|WP_079258909.1|4417466_4418210_-|ABC-transporter-permease
MKTLVKLEIVRTLRNRKFMFFTIVYPSALFLLIAGSADADDQVPGTRLSMPLYYMVAMASFGALTAGLMGNGERIAKEREGGWTRQLRLTPLPGRGYVAAKIAVGAVATLPSIVVVFVVAAVGKGVRLDAVWEWPALTGAIWAGSLVFAALGVAIGYLASGDAVRPLTMIIYFGLSILGGLWMPTTSYPDWLRNIGDHLPTHAYAALGQAIELGGAPHAKDVALLIGYLALFAGGAAWLYRKDTRKA
>NZ_CP029823.1|WP_099014887.1|4416108_4417380_-|sensor-histidine-kinase
MADQAEWTDGDPEHRPRGRRPLTWWADATAYDEENDQLVTIGQSPENRRQALIKLMWIGIWMAYMGAPVSDLADGHHTVPATVCGALGLLAFVTVYLVLIFRHTGRALSRRTVFGALGTICVLAVVLTLTMGGDWLVLCVYVSVAFGAVLPLRLSRWAIPLNTVCMVAVGVLVRGSHGLVSALIVPSLLGGFAMTGVRQMVRTTRALRAARATVAQLAANEERLRLARDLHDLLGHSLSLITLKSELAGRMLPGKPEQAARQVADIERVSRQALVDVREAVSGFRRPTLEAEVAGARTALAAAGIAADLSRAGTHHPDLPPDQEGALAWALREAVTNVVRHSGARRCAVTLDETGGELCLTVTDDGRGATGPHGNGLTGLAERLQLADGRLETGPGERGGFTLRALVPLSRGARAELPSQAAP
>NZ_CP029823.1|WP_099014888.1|4415435_4416050_-|response-regulator-transcription-factor
MRGVIRVLLAEDQSMVREALAALLGLEDEIEVIAQVARGDEVVAAARTHRPDVALLDIEMPGLSGIEAAAALHRAEPGIRIVILTTFGRPGYLRRAMESGADAFLVKDAPAAQLADAIRRVLRGERVIDPTLAAAALVDGASPLTEREREVLRASGDGSTNAELARALHLSPGTVRNYLSTAIQKTAARNRAEAVRIARDKGWL
>NZ_CP029823.1|WP_069864360.1|4428127_4429132_+|ABC-transporter-permease
MTSPSQTGVVEKTAPGAEGGAPAGLAPRQLMWRRFKRDRTGVISACVVVFFFAVAVLAPVISALYGKDPYTTYGLDRPELLDPLTGYPMKPNGGIDGEFWFGIEPKLGRDVLTQLVYGIRTSLLIGLAATVLSTLTGIVIGVVAGYMGGRTDYFLGRLIDLLLSFPQQLFFVAFMPVVTALFVSPQKETPTYFRVTALVMVLWLLGWMQLARLLRGQVLSLREREFVEAAKVTGASPWRIVRKELLPNLGTPILVQSTLMLPNFVTTEAALSFLGVGVVEPTPDWGRMFAKGANFYEGDITYMFFPGIAMVVFVVAFNLLGDSVRDAMDPKTTR
>NZ_CP029823.1|WP_069865491.1|4429209_4431006_+|ABC-transporter-substrate-binding-protein
MEERSKNSRRARTYAVALAAGALALAGCSSGGGGSDPKDSNEPKMESQDITLGTAADSTGPAKDLAGAKKGGTVTVLQRDAFEHLDPGQIYVSDELIMQTLYNRTLTNYQFDDKTGKAKLVGDLATDTGKSSDGGRTWTYTLKDGLKYEDGSPITSKDVRQAVERLYAPYQTNGPTYLQQWLSGEGQKYRKALPDGPYKGKHLPKSVLDTPDDKTVVFHFDQPRAEVPFAVAMPNIGAVPPGKDTKEKYDKAPLASGPYKIRNFKPGKGIQFVKNDQWDPKTDSIRHQYVNTFDVSFGHQWVDSTRRLQADKGADRNGMTWTNAVDPSQISTVLKDKEAMSRSLTETQPYVDVVSINTDRIKDKKVREAIAWAFPSGQYLQQFGGPKAGEIGGGLVGPTLKGYDPSFDPFQKKKYPGGNAKKARELLKEAGKENYELVYAYGNGDTHQDASVVVERALERAGFKVEKKEIDQSTYYTQIGKVKNKYDLYRSSWGADWPSASTVVPPLYDGKNVYDDSANYSHLNVPSVNAEIGKVAKVSDLSRATSEWIKLSEKILSDEIPAVPTFYNRLFTLWGSGIGGVKFNSVYGAVDPTAVFIK
>NZ_CP029823.1|WP_069864362.1|4431091_4432069_+|ABC-transporter-permease
MFRFLARRSLGAIVILILISAITFFLFFALPAEPARLACGKNCDPTSLAMINKNLGLDQPVPVQYWKFMVGIFAGRDFAVGHCDAPCFGYSFVSQEPVWGTIVDRFPTTLSLALGGAAVFLVCGIGIGMIAAWRRGTWIDKFFSSLSLLGASMQIYFVGVLALAWFVSGLGIMDQPAYYPFTDNPAKWFSGMLLPWVVLSLIFMANYSRMTRSQMVEQLQEDHVRTARAKGLSSRTVFFRYAWRGAIAPIITIFGIDLGSLLGGAMVTEYTFTLHGIGRLAVESVQLTDLPMLMGVMLVSSAAIVVFNILVDAAYAFIDPRVRLA
>NZ_CP029823.1|WP_079258904.1|4432091_4433159_+|ABC-transporter-ATP-binding-protein
MTTLTKPDDGGTPPEAGPGAFLSVRDLYVRFATEDGTVKAVDGLSFDLERGRTLGIVGESGSGKSVTNLTVLGLHDPRTTTVSGEILLDGQELTGAPERTLERLRGNTMAMIFQDPLTALSPYYTVGRQIAEPYRKHTGASKSEARSRAIEMLEKVGIPNPRLRVDDYPHQFSGGMRQRAMIAMSLVCDPDLLIADEPTTALDVTVQAQILDLLRDLQQEFGSAIILITHDLGVVANTADDLLVMYAGRAVERGTVREVLRAPQHPYTWGLLGSMPRLSSDVDEPLSPIPGSPPSLLSPPPGCPFHPRCRYTDQVAGDRCATERPVLPDGRGAACHLGAERKQTLFTEQIKPRLG
>NZ_CP029823.1|WP_099014882.1|4433185_4434313_+|ATP-binding-cassette-domain-containing-protein
MSIESGIPEPLLVTEKLTKHFPIMGGFPFKRKVGAVQAVDGIDLTVHAGESFGLVGESGCGKSTTGRLLTRLLEPTGGTITYRGRDITHAGRKELAPIRSEIQMIFQDPYSSLNPRQTVGAIISGPMEINGIDPPGGREARVRELLEIVGLNPEHYNRFPHEFSGGQRQRIGVARALALEPKLIVADEPVSALDVSIQAQVVNLLQKLQRELGIAFLFIAHDLAVVRHFSQRVAVMYLGKVVEVGDRDAIYRRPRHPYTHALLSAVPDAAVVMAEDTENDPDSLRRERIRLAGDVPSPINPPSGCRFRTRCWKAQDKCAREEPPLIRLDGNGEGHLAACHFPEDPTLEAREEDVVLDPALIAAESGTEAPPRKEP
>NZ_CP029823.1|WP_079153056.1|4434413_4435118_-|GNAT-family-N-acetyltransferase
MPGGFLVLHREYARSHEHNQLHIVGPADPEGLPALADEAMAFLPHRRITVHDETLGPLCAPALERAGYSHVTEVLMVHTGPVPEAAAADVVERDLGPDPYGPLRRALTAQQRRWMPDADERTVHDLVERRTARRAGAEDVLFLAAHDDSGEIASWADLYLEPAAGIAQIEEVATAEPYLRRGYADAVLTAALRRAAAAGCALRFLVADQDDWPLRWYGRRGFTAVGRAHSFSRF
>NZ_CP029823.1|WP_093704031.1|4435352_4435550_-|hypothetical-protein
MTPVQVDWLSIVFGPLALIAFALAFSAQRSASKRGESMPGWGKTVQGVGMGLVLFVAFSNMMWGG
>NZ_CP029823.1|WP_099014881.1|4435649_4436774_-|epoxide-hydrolase
MEIHPFRIDVPQPDLDDLRQRLERTRWPERLPGAGWSDGASLDHVRELAAYWATGFDWRAREARLNAFPQFTTEIDGQRTHFLHVRSPEPAALPLLITHGWPGSVAEFTEVIGPLTDPRGHGGDPADAFHVVIPSLPGFAFSAPPREPGWGIRRIATAWTELMRRLGYERYGTQGGDFGSLISPEVARVAPSRVVGVHVNALVTVGSADPAGPADLTPAERSRLAGSQRWHRELSGYAAIQGTRPQTLSYGLADSPVGQLAWNVDWFAAHGDKPGALDRDAVLTNVSLYWFTNTAGTSARLYKEAASAWGTPPERSGVPTGVAVFRGDTAIRRLAEPSHAITHWSEFETGGHFAAMEVPDLLVDDVRTFFRDLR
>NZ_CP029823.1|WP_099014880.1|4437320_4438946_+|ABC-transporter-substrate-binding-protein
MPRTALRAVTAATALVAVTALTACGGGDGGADAGVIRSSWGDPPNPLEPANTNDVQGGKVLDMIFRGLKRYDPKTGEAKNALAERIESPDQRNYTVTLKKGWRFANGEKVTAASFVNAWNYGARIDHQQRNAYFFEYIEGYDKVHPATGGAPTAKTLSGLRVRNERTFTVRLTQKFSTWPKTLGYNAYVPLPRAFFEDHAGWLRKPIGNGPYQVRSYTRGSVMELRAWRGYPGPDKARNKGVDLRVYTDSNTAYTDLQAGNLDLVDDVPAQQLKFVRSDLGDRYINQPAGIIQTLTFPMYDRAWSGPAKAGLRRGISMAINRAQITERIFHGTRTPATDWTSPVLRHQGGYQQGLCGDACRYDPVRARKLIKAGGGLPGGRMTITYNADTGSHKEWVDAVCNSVNTVLRNDRACVGKPVGTFADYRNKVAGKKMTGPFRAGWQMDYPLIQNFLQPMYYTGASSNDGHFSDTGFDRLVNQANAASADGRAIAGFRDAEKILAQQMPAIPLWYQNGSAGYSQRLSEVALNQFSVPVYARIRVG
>NZ_CP029823.1|WP_069864373.1|4438949_4439873_+|ABC-transporter-permease
MGRYALRRLAQMIPVFIGSTFLIFFMVYALGDPVAALFGDKAPDPATAARIRKELYLDEPLWRQYLHYMGQIFSGHFGTAFNGQPVTELMASAFPVTLRLTVVAVVFEMALGITLGVLSGLRRGRGLDTSVLLLTLVVVSVPTFVSGTVLQYLFGVSWGWARPSVSPEAPLNELLLPGVVLGLVSLAFTTRLTRTSIVENARADYVRTAVAKGLPRHRIVTRHLLRNSLIPVVTFIGTDIGALMGGAIVTERIFNIHGVGYQLYQGILRQNSPTVVGFVTILVIVFLLANLLVDLLYAVLDPRIRYA

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Crispr_ID: NZ_CP029823_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_6

5066022-5066233

Orphan

Consensus_repeat	Method
CACGAGGAGACCGGCCACGGGGCACCCCGCCGCGGCGC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP029823_6

>merge|NZ_CP029823|6|5066022-5066233|PILER-CR
CACGAGGCGTCGGGGCACGGGGCACCCCACCGCAAGGAACCCGATCACACGGACCACGAGACAACCGGCCGCAGAACGTCCGGCCCCGGGACGTCGGAGCGCGTGGTGACCGGCCACGAGGCGCCCGGACGCGGGGCGACCGCTCATGAGGCCCCTGGGCGGGTGGCGCCCGGCCACGCAGACACCGGCCACGGGGCACCCCGCCGCGGCGC

>NZ_CP029823|6|1|5066022-5066233|PILER-CR
CACGAGGCGTCGGGGCACGGGGCACCCCACCGCAAGGA	ACCCGATCACACGGACCACGAGACAACCGGCCGCAGAACGTCCGGCCCCGGGACGTCGGAGCGCGT
GGTGACCGGCCACGAGGCGCCCGGACGCGGGGCGACCG	CTCATGAGGCCCCTGGGCGGGTGGCGCCCGGCCACGC
AGACACCGGCCACGGGGCACCCCGCCGCGGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_099014571.1\|5067301_5068174_-\|aldo/keto-reductase-family-oxidoreductase	unknown	unknown	gnl\|CDD\|236676
NZ_CP029823.1\|WP_099014573.1\|5063672_5064554_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP029823.1\|WP_069865631.1\|5061568_5061886_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099017043.1\|5068388_5069252_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182137
NZ_CP029823.1\|WP_099014577.1\|5057306_5058755_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|280596
NZ_CP029823.1\|WP_093706819.1\|5072241_5072808_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099014568.1\|5071322_5071991_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	unknown	unknown	gnl\|CDD\|274750
NZ_CP029823.1\|WP_099014569.1\|5069591_5070692_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
NZ_CP029823.1\|WP_099014566.1\|5074433_5075657_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP029823.1\|WP_069865127.1\|5055957_5057139_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|380115
NZ_CP029823.1\|WP_099014570.1\|5069331_5069595_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_093703783.1\|5058854_5059322_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP029823.1\|WP_069865161.1\|5073441_5073960_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|376771
NZ_CP029823.1\|WP_069865135.1\|5060342_5060555_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP029823.1\|WP_099014576.1\|5060636_5061467_+\|arylamine-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366312
NZ_CP029823.1\|WP_069865159.1\|5072865_5073063_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099014575.1\|5061858_5062554_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_069865133.1\|5059480_5060332_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP029823.1\|WP_069865633.1\|5070684_5071290_-\|ribosomal-protein-alanine-N-acetyltransferase	unknown	unknown	gnl\|CDD\|273701
NZ_CP029823.1\|WP_099014574.1\|5062746_5063607_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|200601

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_099014571.1\|5067301_5068174_-\|aldo/keto-reductase-family-oxidoreductase	gnl\|CDD\|236676	PRK10376, PRK10376, putative oxidoreductase; Provisional.	0
NZ_CP029823.1\|WP_099014573.1\|5063672_5064554_-\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	4.06091e-20
NZ_CP029823.1\|WP_099014566.1\|5074433_5075657_-\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.9317e-25
NZ_CP029823.1\|WP_099017043.1\|5068388_5069252_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182137	PRK09906, PRK09906, DNA-binding transcriptional regulator HcaR; Provisional.	3.80742e-35
NZ_CP029823.1\|WP_099014577.1\|5057306_5058755_+\|hypothetical-protein	gnl\|CDD\|280596	pfam02458, Transferase, Transferase family. This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis. Deacetylvindoline 4-O-acetyltransferase EC:2.3.1.107 catalyzes the last step in vindoline biosynthesis is also a member of this family. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.	2.99459e-47
NZ_CP029823.1\|WP_099014568.1\|5071322_5071991_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	gnl\|CDD\|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	3.42143e-61
NZ_CP029823.1\|WP_069865161.1\|5073441_5073960_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|376771	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE. This family of proteins is involved in the synthesis of threonylcarbamoyl adenosine (t(6)A).	8.99484e-49
NZ_CP029823.1\|WP_099014574.1\|5062746_5063607_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|200601	cd10979, CE4_PuuE_like, Putative catalytic domain of uncharacterized prokaryotic polysaccharide deacetylases similar to bacterial PuuE allantoinases. The family includes a group of uncharacterized prokaryotic polysaccharide deacetylases (DCAs) that show high sequence similarity to the catalytic domain of bacterial PuuE (purine utilization E) allantoinases. PuuE allantoinase specifically catalyzes the hydrolysis of (S)-allantoin into allantoic acid. It functions as a homotetramer. Its monomer is composed of a 7-stranded barrel with detectable sequence similarity to the 6-stranded barrel NodB homology domain of DCA-like proteins in the CE4 superfamily, which removes N-linked or O-linked acetyl groups from cell wall polysaccharides. PuuE allantoinase appears to be metal-independent and acts on a small substrate molecule, which is distinct from the common feature of DCAs which are normally metal ion dependent and recognize multimeric substrates.	1.61052e-135
NZ_CP029823.1\|WP_069865127.1\|5055957_5057139_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|380115	pfam18096, Thump_like, THUMP domain-like. This is a domain of unknown function found in bacteria.	2.09795e-19
NZ_CP029823.1\|WP_093703783.1\|5058854_5059322_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	1.72356e-10
NZ_CP029823.1\|WP_069865135.1\|5060342_5060555_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	1.55485e-14
NZ_CP029823.1\|WP_099014576.1\|5060636_5061467_+\|arylamine-N-acetyltransferase	gnl\|CDD\|366312	pfam00797, Acetyltransf_2, N-acetyltransferase. Arylamine N-acetyltransferase (NAT) is a cytosolic enzyme of approximately 30kDa. It facilitates the transfer of an acetyl group from Acetyl Coenzyme A on to a wide range of arylamine, N-hydroxyarylamines and hydrazines. Acetylation of these compounds generally results in inactivation. NAT is found in many species from Mycobacteria (M. tuberculosis, M. smegmatis etc) to man. It was the first enzyme to be observed to have polymorphic activity amongst human individuals. NAT is responsible for the inactivation of Isoniazid (a drug used to treat Tuberculosis) in humans. The NAT protein has also been shown to be involved in the breakdown of folic acid.	1.38361e-75
NZ_CP029823.1\|WP_069865133.1\|5059480_5060332_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.17647e-07
NZ_CP029823.1\|WP_069865633.1\|5070684_5071290_-\|ribosomal-protein-alanine-N-acetyltransferase	gnl\|CDD\|273701	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR\|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. [Protein synthesis, Ribosomal proteins: synthesis and modification].	3.28977e-32
NZ_CP029823.1\|WP_099014569.1\|5069591_5070692_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	0

>NZ_CP029823.1|WP_099014573.1|5063672_5064554_-|alpha/beta-hydrolase
MAPVIPGFDYRRVPVADGVSVNAAVAGSGSPLVLLHGFPQTHLMWRHVAADLAADHTVICPDLRGYGASDKPAADADPAAYAKRTMAADIVALARALGHDRFALAGHDRGALVAFRAGLDHPAAITHLACLDVLPTLDMWDVLHGTTGAVGFHLYLMAQPPGLPERMISACPDDFFGHFLDLWTGDPRAIPADVRAAYLDACRAAVPSIVADYRASAGVDVDHDRADRDGGRRLTMPVTVVQQDWGAALGYDAAAVWRAWADDLEHATVGYGHFMAEEAPADIAKTLRELLAR
>NZ_CP029823.1|WP_099014574.1|5062746_5063607_+|polysaccharide-deacetylase-family-protein
MDNQLFDYSPIVEREPIHWPDGARVAFYVGLNVEHYQVDRPSTSIFPDTRALAPDPLNYGWRDYGPRVGIWRLIESLDRHRVRASVMLNSDVAERYPQIIRAGRERNWVWAAHGRNNSILQADMTPEEERAYLTEVIGTIEKATSRRPRGWLGPALTETFRTPELLAELGLRYVLDWANDDQPYRLNVPGMLSVPYSIEVNDIQLFVGKSLSGPDFVRIVKDQLDQLHADAATSGRVMSLVLHPFVINQPFRHRYVDEALEYVVNHPGVWVTTSDEIAEHYAARTE
>NZ_CP029823.1|WP_099014575.1|5061858_5062554_-|hypothetical-protein
MTPPIELPPLPPGPDERPWKDRAGLLDERARAMGTLARWYLAPHRALLLWLSTLIFALGWSLAVSGFQFLVKGEIVEHILGVIFLGLALGATVPSSLGVASGIRRDVFVGACLRDWAELERDPQTLPHWRVSGGALLWLGPSIVLACLGLALGGFAFFSDISTESFGTVAGIGIVFAVAGALGMAKAIDYYRLVRRELRPHTGGPDTDDPDPRSPDPRSPDLGYDGSFWSD
>NZ_CP029823.1|WP_069865631.1|5061568_5061886_+|hypothetical-protein
MSNDKLSISDQDLSDLIKDLEEMLSYLEEQIERLGHLRQSMDPDDHKGPAVAAYKKLERDAYAGAVRVRQLLTRIEEAAKQRGESPGERYEELRSRFQSLQKLPS
>NZ_CP029823.1|WP_099014576.1|5060636_5061467_+|arylamine-N-acetyltransferase
MEPVRIDLDAYLTRIGWTGDRPPAPTVETLRAVHLAHLTSIPFENLEPLLGSAPSLALPDLEAKLVRGRRGGYCFEHNGLLSAALTALGFGVTGLAARVRVGAAPGTVRPRTHTLMLVEVPGEERRYAADVGFGSIGSLLEAVPLVAGTEFHDGTRRHRYVREPHPGGPEDLWVLQAFLDGAWEDQYAFTLEPHDASDYRVANWYVATNPRSPFHNALYAQRTTLDRHLHLSGRTLVETGSDGTRKERQLADNGEVLRVLAADFGIELPPGTVLPD
>NZ_CP029823.1|WP_069865135.1|5060342_5060555_+|DUF397-domain-containing-protein
MSEANWRKSSYSGAGDGNACIELAFMGRAVALRESDDPRIVLTTTPAKLGSLLRSIKAGELDHLAAVPEA
>NZ_CP029823.1|WP_069865133.1|5059480_5060332_+|helix-turn-helix-domain-containing-protein
MPPRSVPTARQVRLGTELRRMREGAGLSIQEAADRLGINRTHITNLELARFGVSEERVRALAAIYACPDSAYVEALVAMTRERKGGWWEEYRGHIATGGLDLAELEYYASSLRVLEIMHMPGLLQTEEYARAVLGYTVPQWSDTDLRRRLSHRMKRRDILDRDDPPQCTFVIHEAALRMRFGPARVLRAQLDNLLESAERKSVTVRVLTFEAGGFHVPGLSVTYALGAVPQLDTAQFDTAHGPVFLDARSQLMNYRAVLDRTEELALPEKESRDFIRKTVQQM
>NZ_CP029823.1|WP_093703783.1|5058854_5059322_-|ATP-binding-protein
MDSDHESDDRPPRRPPSPSKDPYVYTLQSSRHASSAKVCRDFVACVLNSVGQWELADTAALCTSELATNAFLHAEGDSVMLRVVIEPPRFRVLLYDASAELPAAVSLPEGDRLRGRGLGLVAALTDAWGTAEGDATGLYAKGVWFELAGKEEGEG
>NZ_CP029823.1|WP_099014577.1|5057306_5058755_+|hypothetical-protein
MTASRTAGESGAKRSFTVRAGEASGDRIRLSVYDLLIGTVYTPRVFFYRETLDGEALRASLGRTLRNFPILSGRMKRDPDGGLSVLCDDSGVRFVEARSSEPMPDYGPRHTAKKVLEQRYLSHAMPFWVVDRDTPLFTVKLTHMKDGGSILGVTMNHAVADGSSYMSFLESWSNEHRGLGYPKPNHDRGIIEALGATDDAGTGDGGAGDAGAGGAHLTVTERGQTSAFLGRILLGRFGKTTTVTTRFTAAELAAMKDAAMSDLAGTERWVSTNDALTAHLWKVLGELRDRPDASEERLGLIADFRSFASEAVPNDYWGNAVSNTRPGMTAAELRSRSLGDIAAAVRSGYAENSEKRIREETAFLQAEHEAGRFKRVIPTMALGAFDSTIALNNWSKLPFYEIDFGQGAPFWYDFSPIPIPWTVHIAPTPATDGQKGGRDVHIALPRTHARALQEPSWVGRFHRYAESGETFPLTSLAAEAKR
>NZ_CP029823.1|WP_069865127.1|5055957_5057139_+|methyltransferase-domain-containing-protein
MGHVDVDAFDSLLGDEGQALLSGLRDYDPAKELATATRLRRDHPPALVSAALTQAALRQRAVAKFGPEDAHRMYFTPNGVEQSTRTSVAEYRASRFTEFGVRRMADLCCGIGGDAIALARAGISVLAVDRDPLTCAVARANAEALGLAELIEVRRADVTEVDTRPFDAVFVDPARRGGRGRVFDPEAYSPPLSWAVEAARTTPRAALKIAPGVPHEVVPEDAEAEWISDHGQVKEAVLWFGTARPGLRRATLLPSGHSLLGTPLLPAPEPGPVGRWLYEPDGAVIRAHLVADVAARVGGRLIDPTIAYITTDELRPTPFATAYEITDVLPFNLKRLKALLREREVGIATIKKRGSAVEPEQLRKKLRLEGGNACTIVLTRSAGSPTMLLGHPA
>NZ_CP029823.1|WP_099014571.1|5067301_5068174_-|aldo/keto-reductase-family-oxidoreductase
MNTPSTSLPGGTWTLGDLTVPRFGYGAMQLAGPGVMGPPADHDGALAVLREAAALGITHIDTAGAYGPRVTNQLIREALHPYPESLHIVTKVGAVRDQQGGWPPARRPEELRRAVHENLEDLGLDSLDVVNLRLGDAQGPRPGSLAESFETLVELQRQGLIRHLGVSNATAEQVAEARAIAPIVCVQNMYNLAHRQDDELIDDLADKGIAYVPFFPLGGFTPLQSTALSAAATRLDATPMSVALAWLLRRSPNILLIPGTSSVAHLRENVAGAGLSLSDEELAELDKIGQ
>NZ_CP029823.1|WP_099017043.1|5068388_5069252_+|LysR-family-transcriptional-regulator
MDTLETRELRYFMAVAEELHFGRAAERLGMAQPPLSRAIQQLERRLGVSLLKRNRRGVSLTGAGEVLLHEGRAALDATTAAARRTRRAGGTDTPGGPRHRLVLAVKAGASHELLHKLLDAYAAEPEAAEIEVLPSGTCEQEDMLRDGRADVALMHAPFNSLAGFDSEELMTEGQIAILPAGHPLAAHKTLSLADVSDIPDLPLARWSRHGIYPPGPGPEIHDQTQLAQLIALGRTVAVFPDSARAWLWAEHTAVPLTDAPPVVTHIAWPAHSRSVALAGLIRTATRL
>NZ_CP029823.1|WP_099014570.1|5069331_5069595_-|hypothetical-protein
MTVALMWEARAVAGKGEELLAWATRQPLDPAPLRRETFRAPEDRVLVITWWDGAYDADGLPELPEPGEELVRRAVHRWRFETVADEG
>NZ_CP029823.1|WP_099014569.1|5069591_5070692_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MADEPLVLGIETSCDETGVGIVRGHTLLADAVASSVDEHARFGGVVPEVASRAHLEAMVPTIQRALKDAGVAASDLDGIAVTAGPGLAGALLVGVSAAKAYAYALGKPLYGVNHLASHICVDQLEHGPLPEPTMALLVSGGHSSLLLAPDITADVRPLGSTIDDAAGEAFDKIARVLNLGFPGGPVIDRIAREGDPDAIAFPRGLTGPRDAAYDFSFSGLKTAVARWIEAKRAAGEEVPVADVSASFQEAVVDVLTRKAVRACKDEGVAHLMIGGGVAANSRLRAMAERRCEDAGITLRVPRPKLCTDNGAMVAALGAEMVARGRSASAWELSADSSLPVTHPHVPAPAGHSHDHVHELSRKNLYA
>NZ_CP029823.1|WP_069865633.1|5070684_5071290_-|ribosomal-protein-alanine-N-acetyltransferase
MRWWDLDRVMELEEELFPEDAWSRGMFWSELAHARGRDATRHYVVAESGPRLVGYAGLAVFDRTGDVQTIAAARDHWGTGLGARILTDLLTAATAFECREVLLEVRVDNARAQRLYERFGFEPIGIRKGYYQPGNVDALVMRLADPATASTATTANAETGESATDPVHPANPAAPANPASATNTANPANPATSVQGTETHG
>NZ_CP029823.1|WP_099014568.1|5071322_5071991_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB
MLLLALDTATPAVTVALHDGSAVIAESSEVDARRHGELLLPAVHRTLKEAGTELGAVTEIVVGAGPGPYTGLRVGLVTAATFGAALGVPVHGLCTLDGIAYAAGRAGLEGPFVVATDARRKEVYWARYDDARTRATEPAVDHPADLAERIAGLPAIGAGALLYPAAFADVPPGMPEHQSAGALASLAAEKLARGEELPPPQPLYLRRPDAKVPANYKVVTPK
>NZ_CP029823.1|WP_093706819.1|5072241_5072808_+|hypothetical-protein
MPRSSTGPAVAVLTVAALGVVGFLGYQAAATAPDHPTQARPGSHSAQHKKKDKDQTESKQKPTALPAGSGTGVRVVYAVGDRRVWLVGADGKATHTFAVGPSPASPDPGTYAVTSRNKGGVGSDGVQVEHVVVFHSQGGVVFGFSAAVDGSMPDPNARKRTGAVRESRADGAAMWEFAQVDTKVVVVP
>NZ_CP029823.1|WP_069865159.1|5072865_5073063_-|hypothetical-protein
MSAHDPVAGPGATREDRSPSMSELLAACAAASAVSTPPRSAEEETLASAEASTTDEAEDEERDAA
>NZ_CP029823.1|WP_069865161.1|5073441_5073960_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MDVGTRITVTSPDQMRDLGRRLAKLLRPGDLVLLTGELGAGKTTLTRGLGEGLGVRGAVTSPTFVIARVHPSLGDGPPLVHADAYRLNGGLDEMEDLDLDVSLPDSVVAVEWGEGKVEGLSEDRLHVVIQRTVGGDTAVTDTMAADVDDVRDVVVTGVGPRWAGEDLASLAG
>NZ_CP029823.1|WP_099014566.1|5074433_5075657_-|alpha/beta-hydrolase
MGDESTAGSTAEMATRVAAGATAVSWRRGAGFAGATIGVLAAGAAAGVALERLTVGRGVRRKARLALDAEGPYGTLRGTPGTAVAEDGTEIYYEIEEMRENAAAPSPRRKRRFGRRAPTPVTMIFSHGYCLAQDSWHFQRSALREVVRTVYWDQRCHGRSSRGCAQADGEAISIDQLGRDLKAVIDAAAPEGPLVLVGHSMGGMTMMALAAQYPDLIRERVIAAAFIGTSAGRLGEVSFGLPVVGVNAVRRVLPGLLKALGWQADLVERGRRATADLFAGLIKRYSFGSKDVDPGVARFAERLIEATPIDVVAEFYPAFIAHDKAAALPHFDGLPVLVLAGDKDLITPMEHSEAIAELLPAAELVILEEAGHLVILEHPEVVNGHLTQLLMRAVDGMGDRAGRGITG

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Crispr_ID: NZ_CP029823_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_7

6172518-6172628

Orphan

Consensus_repeat	Method
CCGCCCCGACCGCGGGCGCGCTGCCACCCG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP029823_7

>merge|NZ_CP029823|7|6172518-6172628|CRISPRCasFinder
CCGCCCCGACCGCGGGCGCGCTGCCACCCGGGCCGCTGTCCACCTAGCCATCGGAGGCGTCACCGACCGCGAGACCGGGGGCCGCCCCGACCGCGGGCGCGCTGCCACCCG

>NZ_CP029823|7|5|6172518-6172628|CRISPRCasFinder
CCGCCCCGACCGCGGGCGCGCTGCCACCCG	GGCCGCTGTCCACCTAGCCATCGGAGGCGTCACCGACCGCGAGACCGGGGG
CCGCCCCGACCGCGGGCGCGCTGCCACCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_099014140.1\|6178456_6178747_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099014141.1\|6178055_6178460_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP029823.1\|WP_099014151.1\|6160325_6161351_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381313
NZ_CP029823.1\|WP_099014139.1\|6178781_6179144_-\|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|223713
NZ_CP029823.1\|WP_069860840.1\|6177351_6177897_-\|UTRA-domain-containing-protein	unknown	unknown	gnl\|CDD\|214869
NZ_CP029823.1\|WP_079152803.1\|6158910_6160308_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|185378
NZ_CP029823.1\|WP_099014148.1\|6167263_6169003_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378931
NZ_CP029823.1\|WP_079258079.1\|6164276_6165089_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	unknown
NZ_CP029823.1\|WP_079258081.1\|6157754_6158729_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270229
NZ_CP029823.1\|WP_099014149.1\|6166584_6167106_+\|YbjN-domain-containing-protein	unknown	unknown	gnl\|CDD\|371210
NZ_CP029823.1\|WP_142881413.1\|6169154_6169409_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099014143.1\|6175996_6176542_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|198381
NZ_CP029823.1\|WP_099014150.1\|6165230_6166592_+\|D-inositol-3-phosphate-glycosyltransferase	unknown	unknown	gnl\|CDD\|132490
NZ_CP029823.1\|WP_069860843.1\|6174254_6175016_+\|phosphoglyceromutase	unknown	unknown	gnl\|CDD\|184519
NZ_CP029823.1\|WP_099014146.1\|6170385_6172458_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320687
NZ_CP029823.1\|WP_099014138.1\|6179195_6179963_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP029823.1\|WP_099014144.1\|6175097_6175787_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_093699731.1\|6156841_6157651_-\|deaminated-glutathione-amidase	unknown	unknown	gnl\|CDD\|143605
NZ_CP029823.1\|WP_099014137.1\|6180152_6180938_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP029823.1\|WP_099014142.1\|6176572_6177355_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_099014141.1\|6178055_6178460_+\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	1.16468e-19
NZ_CP029823.1\|WP_099014151.1\|6160325_6161351_-\|aldo/keto-reductase	gnl\|CDD\|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	9.86706e-150
NZ_CP029823.1\|WP_099014139.1\|6178781_6179144_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|223713	COG0640, ArsR, Predicted transcriptional regulators [Transcription].	1.45927e-09
NZ_CP029823.1\|WP_069860840.1\|6177351_6177897_-\|UTRA-domain-containing-protein	gnl\|CDD\|214869	smart00866, UTRA, The UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain. It has a similar fold to HutC/FarR-like bacterial transcription factors of the GntR family. It is believed to modulate activity of bacterial transcription factors in response to binding small molecules.	1.23419e-23
NZ_CP029823.1\|WP_079152803.1\|6158910_6160308_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|185378	PRK15481, PRK15481, transcriptional regulatory protein PtsJ; Provisional.	5.72301e-61
NZ_CP029823.1\|WP_099014148.1\|6167263_6169003_+\|hypothetical-protein	gnl\|CDD\|378931	pfam12708, Pectate_lyase_3, Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.	4.94262e-19
NZ_CP029823.1\|WP_079258081.1\|6157754_6158729_-\|hypothetical-protein	gnl\|CDD\|270229	cd01008, PBP2_NrtA_SsuA_CpmA_like, Substrate binding domain of ABC-type nitrate/sulfonate/bicarbonate transporters, a member of the type 2 periplasmic binding fold superfamily. This family represents the periplasmic binding proteins involved in nitrate, alkanesulfonate, and bicarbonate transport. These domains are found in eubacterial perisplamic-binding proteins that serve as initial receptors in the ABC transport of bicarbonate, nitrate, taurine, or a wide range of aliphatic sulfonates. Other closest homologs involved in thiamine (vitamin B1) biosynthetic pathway and desulfurization (DszB) are also included in this family. After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. These binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	6.81664e-07
NZ_CP029823.1\|WP_099014149.1\|6166584_6167106_+\|YbjN-domain-containing-protein	gnl\|CDD\|371210	pfam10722, YbjN, Putative bacterial sensory transduction regulator. YbjN is a putative sensory transduction regulator protein found in Proteobacteria. As it is a multi-copy suppressor of the coenzyme A-associated temperature sensitivity in temperature-sensitive mutant strains of Escherichia coli the suggestion is that it both helps CoA-A1 and possibly works as a general stabilizer for some other unstable proteins. This family was expanded to subsume other related families: DUF1790, DUF1821 and DUF2596.	9.55811e-20
NZ_CP029823.1\|WP_099014143.1\|6175996_6176542_+\|hypothetical-protein	gnl\|CDD\|198381	cd10434, GIY-YIG_UvrC_Cho, Catalytic GIY-YIG domain of nucleotide excision repair endonucleases UvrC, Cho, and similar proteins. UvrC is essential for nucleotide excision repair (NER). The N-terminal catalytic GIY-YIG domain of UvrC (also known as Uri domain) is responsible for the 3' incision reaction and the C-terminal half of UvrC, consisting of an UvrB-binding domain (UvrBb), EndoV-like nuclease domain and a helix-hairpin-helix (HhH) DNA-binding domain, contains the residues involved in 5' incision. The N- and C-terminal regions are joined by a common Cys-rich domain containing four conserved Cys residues. Besides UvrC, protein Cho (UvrC homolog) serves as a second endonuclease in E. coli NER. Cho contains GIY-YIG motif followed by a Cys-rich region and shares sequence homology with the N-terminal half of UvrC. It is capable of incising the DNA at the 3' side of a lesion in the presence of the UvrA and UvrB proteins during NER. The C-terminal half of Cho is a unique uncharacterized domain, which is distinct from that of UvrC. Moreover, unlike UvrC, Cho does not require the UvrC-binding domain of UvrB for the 3' incision reaction, which might cause the shift in incision position and the difference in incision efficiencies between Cho and UvrC on different damaged substrates. Due to this, the range of NER in E. coli can be broadened by combining action of Cho and UvrC. This family also includes many uncharacterized epsilon proofreading subunits of DNA polymerase III, which have an additional N-terminal ExoIII domain and a 3'-5' exonuclease domain homolog, fused to an UvrC-like region or a Cho-like region. The UvrC-like region includes a GIY-YIG motif, followed by a Cys-rich region, and an UvrB-binding domain (UvrBb), but lacks the EndoV-like nuclease domain and the helix-hairpin-helix (HhH) DNA-binding domain. The Cho-like region consists of a GIY-YIG motif, followed by the Cys-rich region, and the unique uncharacterized domain presenting in the C-terminal half of Cho. Some family members may not carry the Cys-rich region. This family also includes a specific Cho-like protein from G. violaceus, which possesses only UvrBb domain at the C-terminus, but lacks the additional N-terminal ExoIII domain. The oother two remote homologs of UvrC, Bacillus-I and -II, are included in this family as well. Both of them contain a GIY-YIG domain, but no Cys-rich region. Moreover, the whole C-terminal region of Bacillus-I is replaces by an unknown domain, and Bacillus-II possesses another unknown N-terminal extension.	0.00141585
NZ_CP029823.1\|WP_099014150.1\|6165230_6166592_+\|D-inositol-3-phosphate-glycosyltransferase	gnl\|CDD\|132490	TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.	0
NZ_CP029823.1\|WP_069860843.1\|6174254_6175016_+\|phosphoglyceromutase	gnl\|CDD\|184519	PRK14120, gpmA, phosphoglyceromutase; Provisional.	0
NZ_CP029823.1\|WP_099014146.1\|6170385_6172458_+\|M48-family-metalloprotease	gnl\|CDD\|320687	cd07328, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase. This family contains peptidase M48-like proteins that are as yet uncharacterized, but probably function as intracellular, membrane-associated zinc metalloproteases; they all contain the HEXXH Zn-binding motif, which is critical for Ste24p activity. They likely remove the C-terminal three residues of farnesylated proteins proteolytically and are possibly associated with the endoplasmic reticulum and golgi.	1.45101e-32
NZ_CP029823.1\|WP_099014138.1\|6179195_6179963_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	7.97077e-72
NZ_CP029823.1\|WP_093699731.1\|6156841_6157651_-\|deaminated-glutathione-amidase	gnl\|CDD\|143605	cd07581, nitrilase_3, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	1.27367e-122
NZ_CP029823.1\|WP_099014137.1\|6180152_6180938_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	7.59706e-41
NZ_CP029823.1\|WP_099014142.1\|6176572_6177355_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	4.57295e-35

>NZ_CP029823.1|WP_099014146.1|6170385_6172458_+|M48-family-metalloprotease
MIAAARAVLALALLAVFYALVAAMVLLWAAFLAAALWTAGAPGVQTPPMSVITACAAFAPIVFGMVWAVIRTARPAAAREDAVTVTRRGAPELWDTVEELALDIGTRPPGHIRLTAEANASVTEDAPLLGLAPGRRVLYLGLPLLAGLSRAELRAVLAHELGHFSRRHSRFGVVAHRGAAGLVAARQAIQDAAAANDLVRLYAGGPLLLLNLYTYVFRWLTRPVRRRQELEADREAARVAGPDAVADALRSTTALDAAWQEFLAEFLAPMRRATGRIPDDPFRAFAHMVEAPELREPLAALRARAVERPADPDDAHPALATRLERLARLPAAEPGTASLSLDPFSLDPLALRPRYAVALGRVMLPGPDAGTRVPWRDWLTELAEHRATRILPPLAEAAREVEETEGMGRKKANPEPKPEPGKEPGPESVTGSVTAPATEPDALTVQRVLWLLDSGRRMPLARALNSRLPHGERMFHGERTELDPLGPLAEALAVLIGAQLVAKGTAYWAMNWTGPSILVPPDGIAPETIRTWADTAVRLPGQTRQLGLHLAALGVDERAPLPSTDPAGDTADGPAPAGKARQISITPGITGPARRRIKAVGGLALTVLLLMTGLSLALWANSDDPSYPRVPVTRWTDRYQPGGGTGTEPAPFPTYQQPTFPARPTIPTFQLPPRSVPTIRIEPVIPRPAP
>NZ_CP029823.1|WP_142881413.1|6169154_6169409_+|hypothetical-protein
MDNPWLTVATVVTVGVLRLMGDVIRWLAARSGERLRARTLAELVSRTEPGTVLTDRRPDGAALTIWRDTDRTVASGGAGRGRSA
>NZ_CP029823.1|WP_099014148.1|6167263_6169003_+|hypothetical-protein
MGMEIGRRRLLGGAMGLAAGATALGAGAPLLTATDAAAAPRTAGGTGGAGGTGDPGGARTSPLWQEFLDRPYTHPQLPYVGRAGYLGGRTSFPRPPVVADVRDYGARPDGSADAAPAINRAIEAAGRRGGGTVLVPPGTYRVDDVIRLGYDNVVLRGAGSGRTTLHATRNLTELIGPYGSRYGGDKSSWSWAGGLIWICPDARLRSLTDAIRARAWPFEGWTGNRRDEWRTLTGLAAPARRGDWTVTVEDPSALRPGDRVLLQLADDDTHSLLSHMAGDVEGAADYVWTDKTKLTSYVPYEWPCRVAAVDRGRGRVTLDRPLPLDARPAWRPRFTTLVPPVTGSGVEGITLDVVETPQAQHLLDKGYNGVALQCAWDCWVDDVTVNNVDNGFLLVAAKACTLRRTRVTGRGSHHPYCCREGSHDNLVEDFVLARRTVPAPAGTQLHGINVEGLSSYNVWSRGRMEMGTFDTHRGMPFANVRTEITVDNTGSHGGDASAGPLYGARFAHWNVTVTNERAGCVRIDDIAPYSATVGISEVRQFGQIDVPDFTGPLHSRIESYGHPEAVQPRNLYQAQRALR
>NZ_CP029823.1|WP_099014149.1|6166584_6167106_+|YbjN-domain-containing-protein
MADPMADTAPEADLRAVIERTLNDAELEWESPEDGTYVVTLPGTRKLSTTCSLRVGRHSLSVNAFVVRHPDENHAAVHRWLLERNTRLYGVSYAIDQLGDIYLVGKLPLAAVTPEELDRLLGTVLENADGSFNTLLEMGFATAIRKEYAWRTSRGESTRNLEAFSNLTRDAAK
>NZ_CP029823.1|WP_099014150.1|6165230_6166592_+|D-inositol-3-phosphate-glycosyltransferase
MSQHASRLGGLRGRSHVPFGTPSHQRLRRMPRRPRRIAMLSVHTSPLHQPGTGDAGGMNVYIVELAKRLAAIDIEVEIFTRATTAALPPAVELAPGVLVRHVDAGPYEGLAKEDLPAQLCAFTHGVMQAWAGHRPGHYDLVHSHYWLSGHVGWLAAERWGVPLVHAMHTMAKVKNAALAEGDTPEPAARVIGEQQIVRAADRLIANTDEEAEELARHYEAARELVAVVHPGVNLDRFRPADGRAAARARLGLPADALIPLFAGRIQPLKAPDILLHAVAHLLEEDPSLRERIVVPVVGGPSGSGLAKPEGLHKLAARLGICDVVRFRPPCAQDELADWYRAASVLVMPSYSESFGLVAIEAQACGTPVVAASVGGLPVAVRDGVSGTLIHGHDPADYARALRPFAAEPERADRMGAAAARHAESFGWDTAAAATAEVYTEAMRERRRLRSGHG
>NZ_CP029823.1|WP_079258079.1|6164276_6165089_-|class-I-SAM-dependent-methyltransferase
MPARVPPPSRPIGSATRGTTNPNRLRRMDRWIAAAHGAALRRAGEPPVAVDLGYGAAPWTAVELLDRLRTVRGGTRVVGVEIDPGRVAAARPYEREGLTFAHGGFEVPLPGGARPALIRAANVLRQYEEGEVAAVWRRLCARLAPGGLLVEGTCDEIGRRHVWVALGPAGPRTVTFAARLGSLERPSDLAERLPKALIHRNVPGEPVHTFLRDFDRAWAAAAPYAPLSARQRWIRSAQTLRAAGWPLADGPRRWRQGEVTVRWEALAPRG
>NZ_CP029823.1|WP_099014151.1|6160325_6161351_-|aldo/keto-reductase
MKRRILGGTGISVSEYALGAMMFGALGNPDHDDSVRIIHRALDAGINFVDTADVYSAGESEEIVGKALKGRRDDIVLATKARSSMGDDPNHGGSSRRWITREVENSLRRLGTDHIDLYQIHRPDPATDVDETLSVLSDLVRAGKVRAVGSSTFPAEQIVEAQWVSDRRGHVRFRSEQPPYSILARGVEAAVLPTAQKYGMGVLSWGPLSAGWLTGRYTKAADVDLSGGRAAVEKHKFDPSLPGNARKLEAVGALSELASDAGLPLAHLAVAFVRAHPAITSVIIGPRTMEQLEDLLAGSEVELSEDVLDRIDEIVPPGTDLNPADSYYTPPALGDKRLRRR
>NZ_CP029823.1|WP_079152803.1|6158910_6160308_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MQENTADPAVARPGDPASVAGLAARIPDTSARGIAAAMTDLIRAGELAPGSALPTVRALAAGLGVSPGTVAEAWAVLRKHRMIATLGRRGSVVSGPPTVPHPTRYERVGDFGDHLALDLAVAAPDPALLPPLESALLAGARTPRLNDYARTAITDGLLAAVADSWPYRPDAWMAVGGGYEGVQLLCQALLVPGDRVAVEDPTAARLLDILEALDAQTVPVACDDQGPLPDSLARALTARPALFLHQSRAQVPCGWSLGPERAAALAGVLEGAPNVAILEDDGLGPLTTGPVAVLGAHLPHRTALVRSYSKAYGPDLRIAVVGGPREMVERARVLRTFGTGWTSRILQDALAHLLTDEDAGRCVREAARHYDARRSALAERLAERGVHTANRDGLMLWVPVVDETSALVTLAARGITVSPGSRFCVSYARPHVRVATSRLTRDGAALDQIAELIALAASSSAGRME
>NZ_CP029823.1|WP_079258081.1|6157754_6158729_-|hypothetical-protein
MSSPVIRLGLRDWDHLVPLASGLVEIPGFTVRVDARDVTPDVLTEPGLDGGETSFSRYVQARAAGDDRLVGLPAFVMRGFRHRCVLVREDSPLRSLGQLAGARIGLTGWPDSGNTWTRALLRAAGVDLAGVRWLVGPLTADETGKDRVGGRPLPAGVSVMAEGESLVDELAAGRLDAVLSPFMPRELFTRTSRFRHLLDDHRTEERAYWEATGFVPGIHLVTLKREVVEAHPELPAALLAGLEESKRRWLGRRRLLADTTPWLLHELTESARLFGDDWMPYGTKSNAEMTRAFCEELYAQGVWPEPIDPEVVFPDPALAAVPAL
>NZ_CP029823.1|WP_093699731.1|6156841_6157651_-|deaminated-glutathione-amidase
MRIAVGQFAATPDWKDNLAACQELTAQAVRGGADLLVLPEGVLARFTEDRHRIREVAQPLDGPFVSEMLAATAGSATTVVVGIHEPSEDGRVFNTLVALRDGELIARYRKIHLYDAFGDLESANVRPADEPPVVIDVAGTKVGLMTCYDVRFPELARLLVDAGAEVLALPAAWVRGPAKERHWEVMITARALENTCWVAASGECGPRNIGNSLVVDPLGTVRSRLAAAPGLAWADAAPDTTAAARRTLPVLANRRFAVDPTVIPLGAPQ
>NZ_CP029823.1|WP_069860843.1|6174254_6175016_+|phosphoglyceromutase
MADAPYKLILLRHGESEWNAKNLFTGWVDVNLNEKGEKEAVRGGELLKDAGLLPDVLHTSLLKRAIRTSQLALDAADRLWIPVRRSWRLNERHYGALQGKDKAQTLAEFGEEQFMLWRRSYDTPPPPLEDGAEWSQSDDPRYATIPPELRPRTECLKDVVERMLPYWYDGIVPDLLAGHTVLVAAHGNSLRALVKHLDGISDADIAGLNIPTGIPLSYDLDTDFRPVTPGGTYLDPDAAKAAIEAVKNQGKKK
>NZ_CP029823.1|WP_099014144.1|6175097_6175787_-|hypothetical-protein
MMEQLQKLVDRHRDCRQESVRFRPSTWRPRLEPYGAAHVLDVGVGCVSPSGDRLISRGDLVDLRDRVGDDPDGLRDLFVAVMIWGSGTTNGRGPRYTEAALSDARLPAVLRTTRQAVRSGDLSGAYRQFILNGVRRSFSTKWFAAVDDRDVGCARALILDSRVLHSLNALGWSSWQAAGTRRWPTRYATYVSSMHGWASSLGVTADWLEWLLFHLNGRVDGPREGQDST
>NZ_CP029823.1|WP_099014143.1|6175996_6176542_+|hypothetical-protein
MEATALTSPDRLWSGQEVLTRPSPVPAVPGVYGWHFEQPPHPDLDARCLLYVGIAPRYMANRTSTQNLRKRVRYHYRGNAAGSTLRLTLGCLLGLELRRVGSGKRMTFGKAGEATLSQWMADNARVCWVERGEPWALESQLISQLDLPLNLAQNGHNAFHSRLKELRAQARQRARELSISA
>NZ_CP029823.1|WP_099014142.1|6176572_6177355_-|GntR-family-transcriptional-regulator
MTVPKAEQDAVDRRSLHERIAADLRDEIMSGDLPPGAKLPSTAQLKERFTASNATVQKALQLLKDEGLAVGRAGAAVTVREHRQRTMRPASYMAPAAPGEPYRWISEAAAEHQARGTSRLLDVTEIRPPSDVAEALRLPEDGTALLRAQVLLLDDEPVELVKSYYPLELARGTAMMDRRKIKGGTPALLAELGYPPRLSVDKVSARVPTQEQYTLLDLPGNLPVLRTLRVVYSDGERPIEATVMAKAGHLYELQYEFTPA
>NZ_CP029823.1|WP_069860840.1|6177351_6177897_-|UTRA-domain-containing-protein
MASDAWISSSMPYLRPVEAGGQGDAWGEEAAARGRRGTQRILHAGEVSAPAAVARLLGLENGDTVVVRRRIMYLDEEPCELTDSYYPAHIAAGTGLAGTAKIRGGAVGLLAELGHVGQRVREDVTARLPDARERELLRTGAEEPVLCLERVVLDEDKRPIQADLITMPAQRQRLRYELRMG
>NZ_CP029823.1|WP_099014141.1|6178055_6178460_+|ATP-binding-protein
MPLMRQQSFTRRKPSIRATRQFVSRTLSEWGYVDRLEEIQLCVSEIATNALLHGVPPGRLFRVRIEAAEEEVRIEVRDSGPGRPTAQSPRADSENGRDLLLVGELADAWGNVEHTVGKTVWFVVKATQTQGRAQ
>NZ_CP029823.1|WP_099014140.1|6178456_6178747_+|hypothetical-protein
MTVRRGHAHGRDFDQLHRDEITVAMNWVIRICQDVVRDHSHMTFWVPTGTPTGAAPTMDHLIDSARTDVLNKLRRQIDGAEAIIGNAEHERAKRQR
>NZ_CP029823.1|WP_099014139.1|6178781_6179144_-|helix-turn-helix-transcriptional-regulator
MASVKQARHPATDEITLIDVMGALNDPIRVGLIRVLADDREHGWGELRAPVAKSTLSHHLRVLRDAGVTRTRQEGTRCFVKLRSDDLNARFPGLLTAILDAAHHDDVGSHVGLADDSPTA
>NZ_CP029823.1|WP_099014138.1|6179195_6179963_+|SDR-family-oxidoreductase
MSVKPPADDLAERVVIVTGAGSGIGRAAARAFARAGARVLGVGRRIDALQETAAGQPAIVAYSADLSDPGAPGEVVNAAVDRWGQLDVLVNNAGITKIMPLADTTDTGITDLFGLNVVAPSLLAREALPHLRRSRGSIVNISSTYGHRPMPGGAHYAASKAALEQLTRSWAVELAADGIRVNALAPGPTESQALAAAGLPDEAIEQIKREEASRIPLGRRGDPDEVAAWILRLADPATTWLTGQILTVDGGLELT
>NZ_CP029823.1|WP_099014137.1|6180152_6180938_+|GntR-family-transcriptional-regulator
MAKYEQIADALRQGIRAGQLGPGERLPAEDKLAARYRTSVPTLQRALSELVAEGLIDRRHGVGTFVRTPRRRVERSNDRHQWEKDRARRSRAERLRTGSTEHDTGLEVTDLAFHAEYRDAKADEDLASVFRIPVGTRLLERIYRTNCLEEDAPFALVNSYLVHDVVAVNPELLDAANEPWPGGTQNQLYTIGIELDRIAERITARPPTVEEAEGLGLKKGVSVIVLRKICTDIGGRVVEVSDVTLCGDRTELVFTTPLKRW

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Crispr_ID: NZ_CP029823_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_8

6411714-6411812

TypeV-U4

Consensus_repeat	Method
CGGGTCCGGTTGTCTCACGGCGGGGGTCCGGC	CRISPRCasFinder

1 spacers

c2c9_V-U4

The CRISPR arrays of NZ_CP029823_8

>merge|NZ_CP029823|8|6411714-6411812|CRISPRCasFinder
GGGGTCCAGCCGTTTCACGGCGCGGGTCCGGTTGTCTCACGGCGGGGGTCCGGCTGTTCTACGGTGCCGGGTCCGGCTGTCTCATGGCGGGGGTCCGGC

>NZ_CP029823|8|6|6411714-6411812|CRISPRCasFinder
GGGGTCCAGCCGTTTCACGGCGCGGGTCCGGT	TGTCTCACGGCGGGGGTCCGGCTGTTCTACGGTGC
CGGGTCCGGCTGTCTCATGGCGGGGGTCCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_099016967.1\|6418217_6419489_+\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
NZ_CP029823.1\|WP_099014060.1\|6408643_6410653_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226644
NZ_CP029823.1\|WP_107528509.1\|6416375_6416798_+\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_CP029823.1\|WP_079257984.1\|6398731_6399721_+\|malate-dehydrogenase	unknown	unknown	gnl\|CDD\|235468
NZ_CP029823.1\|WP_079257977.1\|6421835_6422435_+\|2'-5'-RNA-ligase-family-protein	unknown	unknown	gnl\|CDD\|379265
NZ_CP029823.1\|WP_069870412.1\|6412640_6413126_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP029823.1\|WP_069870693.1\|6420584_6421598_+\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|234866
NZ_CP029823.1\|WP_069870421.1\|6404211_6405714_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143437
NZ_CP029823.1\|WP_069870703.1\|6402272_6403016_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180207
NZ_CP029823.1\|WP_099016969.1\|6401752_6402214_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099014063.1\|6397400_6398447_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|371292
NZ_CP029823.1\|WP_099014056.1\|6416794_6418003_+\|transposase	c2c9_V-U4	-	gnl\|CDD\|223747
NZ_CP029823.1\|WP_069870419.1\|6405919_6407506_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|235000
NZ_CP029823.1\|WP_099014059.1\|6410654_6411632_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270361
NZ_CP029823.1\|WP_069870406.1\|6414998_6416219_-\|ornithine--oxo-acid-transaminase	unknown	unknown	gnl\|CDD\|179736
NZ_CP029823.1\|WP_099016968.1\|6413394_6414819_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP029823.1\|WP_099014061.1\|6407505_6408597_+\|betaine/proline/choline-family-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213261
NZ_CP029823.1\|WP_099016966.1\|6419458_6420511_-\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP029823.1\|WP_099014062.1\|6403268_6404063_+\|serine/arginine-repetitive-matrix-protein-2	unknown	unknown	unknown
NZ_CP029823.1\|WP_099014058.1\|6411861_6412629_-\|isocitrate-lyase/phosphoenolpyruvate-mutase-family-protein	unknown	unknown	gnl\|CDD\|379346

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_099016967.1\|6418217_6419489_+\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP029823.1\|WP_099014060.1\|6408643_6410653_+\|ABC-transporter-permease-subunit	gnl\|CDD\|226644	COG4176, ProW, ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism].	5.17546e-75
NZ_CP029823.1\|WP_107528509.1\|6416375_6416798_+\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	1.6457e-49
NZ_CP029823.1\|WP_079257984.1\|6398731_6399721_+\|malate-dehydrogenase	gnl\|CDD\|235468	PRK05442, PRK05442, malate dehydrogenase; Provisional.	0
NZ_CP029823.1\|WP_079257977.1\|6421835_6422435_+\|2'-5'-RNA-ligase-family-protein	gnl\|CDD\|379265	pfam13563, 2_5_RNA_ligase2, 2'-5' RNA ligase superfamily. This family contains proteins related to pfam02834. These proteins are likely to be enzymes, but they may not share the RNA ligase activity.	4.71928e-25
NZ_CP029823.1\|WP_069870412.1\|6412640_6413126_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	1.30968e-23
NZ_CP029823.1\|WP_069870693.1\|6420584_6421598_+\|tryptophan--tRNA-ligase	gnl\|CDD\|234866	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed.	0
NZ_CP029823.1\|WP_069870421.1\|6404211_6405714_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143437	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.	0
NZ_CP029823.1\|WP_069870703.1\|6402272_6403016_+\|hypothetical-protein	gnl\|CDD\|180207	PRK05696, fliL, flagellar basal body-associated protein FliL; Reviewed.	0.000184017
NZ_CP029823.1\|WP_099014063.1\|6397400_6398447_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|371292	pfam10901, DUF2690, Protein of unknown function (DUF2690). This bacterial family of proteins has no known function.	1.39012e-18
NZ_CP029823.1\|WP_099014056.1\|6416794_6418003_+\|transposase	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.14967e-33
NZ_CP029823.1\|WP_069870419.1\|6405919_6407506_+\|oxidoreductase	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	2.47196e-128
NZ_CP029823.1\|WP_099014059.1\|6410654_6411632_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270361	cd13643, PBP2_BCP_2, Substrate-binding domain of osmoregulatory ABC-type glycine betaine/choline/L-proline transport system-like; the type 2 periplasmic-binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to certain quaternary ammonium compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine, proline betaine, choline, and carnitine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.48397e-109
NZ_CP029823.1\|WP_069870406.1\|6414998_6416219_-\|ornithine--oxo-acid-transaminase	gnl\|CDD\|179736	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.	0
NZ_CP029823.1\|WP_099014058.1\|6411861_6412629_-\|isocitrate-lyase/phosphoenolpyruvate-mutase-family-protein	gnl\|CDD\|379346	pfam13714, PEP_mutase, Phosphoenolpyruvate phosphomutase. This domain includes the enzyme Phosphoenolpyruvate phosphomutase (EC:5.4.2.9). This protein has been characterized as catalyzing the formation of a carbon-phosphorus bond by converting phosphoenolpyruvate (PEP) to phosphonopyruvate (P-Pyr). This enzyme has a TIM barrel fold.	3.66635e-69
NZ_CP029823.1\|WP_099014061.1\|6407505_6408597_+\|betaine/proline/choline-family-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213261	cd03294, ABC_Pro_Gly_Betaine, ATP-binding cassette domain of the osmoprotectant proline/glycine betaine uptake system. This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.58675e-159
NZ_CP029823.1\|WP_099016966.1\|6419458_6420511_-\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	1.91712e-36
NZ_CP029823.1\|WP_099016968.1\|6413394_6414819_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.26743e-110

>NZ_CP029823.1|WP_099014059.1|6410654_6411632_+|ABC-transporter-substrate-binding-protein
MARTRTQLLMAAVGVTAVFTATGCGAADMTKQSSPYANVGGAKSVTLSVQSWVGAQSNVAVAQYLLEHELGYRVDTVQVDEVPAWDALSQDRVDAILEDWGHPDQEQRYVKDKKTIVPGGGLGVTGHIGWWVPKYFADAHPDVLNWKNLNKYAKTFRTAESGGKGQLLDGSPSYVTNDKALVKNLKLNYQIVFSGSEAAQITQMKQFAKAKKPFLSYWYEPQWLFNQVPMVEVKLPKYTDECANEGAEDPDSFDCAYPTTPLQKYLNADFAKKGGKAAAFLKKFHWTKQDQNEVSELIASRGMSPEDASKKWVEAHPDVWKKWIP
>NZ_CP029823.1|WP_099014060.1|6408643_6410653_+|ABC-transporter-permease-subunit
MSATATRPTTEPGATGTAAPEPRPSPLTAAVHSHAVRKLAVLVVIAAVLIPLAHAKWASGTWPDALTVDVSEPLGKASDWIIDNRDSHWIFLYFFGHISNAVIISVRAVYVVLLTLGWAGVTAASTLVAWRVAGVRVAVTTVVSFVVCGLLGMWVPTMQTLALMAVAVTASVVIGVLLGLAGGLSERAFRALRPVLDTMQVLPAFAYLLPVVLIFGIGVPGAVLATVIYAAPPMARLTALGLRGADAGVLEAVTSLGATWRQRLLSARLPLARKELLLGVNQAIMMALSMAVIASVIGGGGLGDRVYQALSSVDVGKALAAGLPIVLLAVVMDRTTASAGERLGAPPAEGGPRLLRGWPAWAGVAAITVVVTVAGRLAGSQTWPTGWTVAIEEPVNQFKDWMVDHLYTGVPVVGGTAEWASDYVKWILDPLREGLQGLPWYAVLLIVAALAWLIGTWATTLTATAAMAAIGVLGVWEPSMDTLSQVVAAVFVTLVLGFAIGIAAARSTRLERLLRPVLDVCQTMPQFVYLIPVVALFGVGRAPAAAAAIVYALPAVIRITTQGLRNVDPAALESARSLGATQGQQLRQVQLPLARPALLLAVNQGVVLVLAVVIIGGLVGSGALGYDVVFGLAQGDLATGLVAGAAIVCLGLMLDRVTQPTARRARKGA
>NZ_CP029823.1|WP_099014061.1|6407505_6408597_+|betaine/proline/choline-family-ABC-transporter-ATP-binding-protein
MATTVAPETPKSPESGERTPVFSVRDLWKVFGPKADRIPGSAEAKLSARELRARTGCTAAVREVSFDVQPGEVFVVMGLSGSGKSTLVRCLTRLIEPTSGTLKIDGEDVLAMDKARLRHLRRHRAAMVFQHFGLLPHRSVIDNVAYGLEIQGVGKAERRAKAAEVVEKVGLTGLERRRPGQLSGGQQQRVGLARALAVDPEVLLFDEPFSALDPLIRRDMQEEVIRLHHDEGRTMVFITHDLSEALRLGDRIALMRDGGIVQLGTPEEIVGSPADDYVRDFVRDVPREQVLTVRRAMRPAKSDEQDGGPALAPGTTVADAIEAVARSGGLARVMDGGRCLGVVDHACLLSVVAGLDRKEVAAA
>NZ_CP029823.1|WP_069870419.1|6405919_6407506_+|oxidoreductase
MSVPVVYDYVVIGGGTAGSVIASRLTEDPGIRVAVIEGGPSDVDRPDVLTLRRWLGLLGGDLDYDYPTTEQPRGNSHIRHSRARVLGGCSSHNTLISFKPLPGDWDEWAEAGAEGWDAESMDPYFQRLRNNIVPVDEKDRNAIARDFVDAAQAAAGVPRVEGFNKKPFHEGVGFFDLAYHPENNKRSSASVAYLHPFLDRPNLHLMLETWAYRLELDETGRVTGVHVRTKDGAEILVRAETEVLVCAGAVDTPRLLMHSGIGPSSDLEALGIPVVHDLPGVGENLLDHPESVIVWETDGPIPDNSAMDSDAGLFIRRDPESRGPDLMFHFYQIPFTDNPERLGYEKPEHGVSMTPNIPKPRSRGRLFLTSADPSVKPALDFRYFTDEEDYDGRTLVDGIRVAREIAKTEPLASWLKREVCPGPEITSDEEIGEYARKVAHTVYHPAGTCRMGATSDELAVVGPDLRIRGLSGVRIADASVFPTMPAVNPMIGVLMVGEKCAELLFEDRDRERHRPDERAATLAPGGEA
>NZ_CP029823.1|WP_069870421.1|6404211_6405714_+|aldehyde-dehydrogenase-family-protein
MAAAETIHVDGVWQAAASGAQREVLDPADAKTLAVVAEGGVEDTDAAVAAARRAFDQGPWPGTPVAERAALLRRVADLLQRDREAIALTESRDTGKTLEEGRVDVDDVTNAFRYFADLAAGESAGRVIDAGTPDVHSVVVHEPVGVCAMITPWNYPLLQASWKIAPALVAGNTFVIKPSEVTPLSTVHLVRLLAEAGLPSGVANLVTGTGDPVGARLSEHPDVDLVSFTGGLISGTKVAQAAAPTVKKVALELGGKNPNVVFADACATAEGFDTAVDQALNAAFIHSGQVCSAGARLIIEESVRERFVAELARRAEKIKLGRGTEDGVECGPLVSAQQLDKTEAYVASALEEGALLRCGGKQPEPNAVRPATGYFYLPTVLDQCHREMRVVREETFGPILTVESFQTEDEAVTLANDTEYGLAGAVWSADTARARRVAARLRHGTVWINDYHPYLPQAEWGGFGKSGVGRELGPTGLDEYRETKHVYENLRPSPVRWFAG
>NZ_CP029823.1|WP_099014062.1|6403268_6404063_+|serine/arginine-repetitive-matrix-protein-2
MHDGGAPGQDTRRALRALAVTIFLAAGMAFSGWVAFGGDGGSRHQAGPLPWDPKTPTATPSGDASQPSDLYPSPGPETGGPTDLPTDLPTGAPSGSPSATPFGTPSSPSLTGAAPPAGYSTQADPAGYHLAVPDGWQRTTQGPSVYYTSPDDSTMIQVFELRGPESTPYESAQEAERIASTHRDYERIALTRLGSAAMDPAQLEYTYESKGSGHRRILDRRFAAPDATMYAVLVIGPSGDRAKEREVHQAAVDTFCPTASCTAS
>NZ_CP029823.1|WP_069870703.1|6402272_6403016_+|hypothetical-protein
MGQGAEPPAPGRRPPNPHLGTVLLAVLAVVLVGGIGVGAWQLVSGDGDDKPRADGGSPSASASSWSSSAEQPSEAPSGPFSETTSAPPSVSADSTQEPPADYVRTTDPEGFRLDVPRGWQRVKRDTGVFYESSDASSLIQVFALTEPDITPYEALRRAETGLKKNPDYHRYELKRLGPGDDADAELEYGYRSAKYGPRRILDRAFAGPDNVQYAVLVAGPADDWPQQRERQRIVLASFCPTAYCPAT
>NZ_CP029823.1|WP_099016969.1|6401752_6402214_+|hypothetical-protein
MAMADAGDGSGMGGGGADRSADASGGGADPAGGGSKFGNIRFGNVRGSAIGIGDHNRIVNGREGEVPCDPAYQELLEAVRQLTDDLRRVVPSPEVGVLTDELAQTQDEIQRTGRAGAGRLARIRVLLQDASASVGMLASGVAVGQAVGALLGG
>NZ_CP029823.1|WP_079257984.1|6398731_6399721_+|malate-dehydrogenase
MTRTPVTVTVTGAAGQIGYALLFRIASGQLLGADVPVKLRLLEIPQGLKAAEGTAMELDDCAFPLLQGIDISDDPNVGFDGANVALLVGARPRTKGMERGDLLEANGGIFKPQGKAINDHAADDIRVLVVGNPANTNALIAQAAAPDVPAERFTAMTRLDHNRALSQLSKKTGAPVSEIKKLTIWGNHSATQYPDVFHAEVAGKNAAEVVSDEQWLADTFIPTVAKRGAAIIEARGASSAASAANAAIDHVHTWVNGTAADDWTSAGVVSDGSYGVPEGLISSFPVTAKDGKFEIVQGLDINEFSRTRIDASVKELEDEREAVRGLGLI
>NZ_CP029823.1|WP_099014063.1|6397400_6398447_+|XRE-family-transcriptional-regulator
MPRWRDLPEELDPQIREFTGRLRTLVERSGLSVVAVADRTGYSKSSWERYLNGRLLPPQGAVEALAEATGADAHHLTTLWELAERSWSRSEMRHDVTMEAIGVAQARDAIERFDPAERGVGARKNGRPMGKDRPSVELPDPEQPLVATAPVFSAPAASAGRAPDSSEQPPPGSSPPSRSGRKRAALFAGGLVGALLLVAGAVLLIDAVGDGEQRGKQPTTAPATSARQLPEGVKCAGEDCAGQDPQTMGCGAAATTTAHVTVGTAYVEVRYSKTCKAAWARITRAAPGDVIEVEAPGAGGAVRSQRARVGADGDAYTKMIAADPTARATACATLTAGTRACAAPGGRG
>NZ_CP029823.1|WP_099014058.1|6411861_6412629_-|isocitrate-lyase/phosphoenolpyruvate-mutase-family-protein
MTAPATTDGARTLRALHHGREPGDPLVLPGPWDAASARVFADAGFPALATPSAGIAASLGHQDGQTPPQEMFATIARIVRAVDIPVSADVEAGYGLAPEELVERLLETGAVGCNLEDFDRAAGRLVEPGRQADLLAAVRAEAGEGLVINARVDTFVHGGPDIGPEAAATAAIERARLYVAAGADCVYPILAPPELLPRLAAAIDAPLNAAAFDPDGPSPRELGRLGATRITFGPRLLRQTMAAAADLVKRLDPAP
>NZ_CP029823.1|WP_069870412.1|6412640_6413126_-|carboxymuconolactone-decarboxylase-family-protein
MTTTETTHRHAPRMQFAKAAPEVYKAMVALDAAARKDVDPKLAELVKTRASQLNHCAFCIDMHTKDARAAGESEDRLYLLNAWEEAVDLYTEKEQAALALTEAVTVLTDGFVPDEVYERAAKHFEERELAQLIALIFTINAWNRIGVTTRLAPGAYKPSGH
>NZ_CP029823.1|WP_099016968.1|6413394_6414819_+|PLP-dependent-aminotransferase-family-protein
MGTDLHLDLPPGGGTGVRDALIRALRDAVRGGRLAPGTRLPSSRSLAADLGIARNTVADAYGELVAEGWLTARQGSGTRVARRVVPPEPAPPRTPPPAAAAAARPVYDLRPGQPDVSAFPRSAWLSAARRALTAAPNDALGYGHPAGRPELRRVLADYLARARGVRAAPERVVICAGFVQGLALLSRVRQKAGHGEVAVESYGLDIHWNVMRGAGLRTVPLPVDQQGARTAELDRLPGPRTVLLTPAHQFPIGVPLDPDRRAAVVDWASRVGGLVLEDDYDGEFRYDRQPVGALQGLDPEHVVYLGTASKSLAPALRLAWMVVPDHLMDDLLAVKGTGEWQLGGLDQLTLAEFIDSGAYDRHVRGMRMRYRRRRDQLVAALAERAPRVRVTGIAAGLHAVLQLPPGTERSVVQGAAWQGLALEGLSRFRYREEREPGGPGPTPGEGPDALVFAYGTPPDHAFTGALEALCRVLP
>NZ_CP029823.1|WP_069870406.1|6414998_6416219_-|ornithine--oxo-acid-transaminase
MGSGRSAERAIAAAEAHGAHNYHPLPVVVASAEGAWMTDVEGRRYLDLLAGYSALNFGHRNHRLIEAAKAQLDRVTLTSRAFHHDRFGAFCAELAELCGMEMVLPMNTGAEAVETAVKTARKWGYRSKGVPDGRARIIAAENNFHGRTTTLISLSTDPEARAQHGPFTPGFPIVPYGDLAAMEAALDAAPEETVAVLLEPIQGEAGVVVPPPGYLAGVRELTRERNVLFIADEVQSGLGRTGTTFACEHEGVVPDVYVLGKALGGGVMPVSAVVSSREVLGVQRPGEHGSTFGGNPLACAVALEVIAMVRTGEFQRRSATLGELLHRELGPLIGNGVRQVRGRGLWAGVDIEPSHGTGRQISERLMDRGVLVKDTHDATIRIAPPLVIGEEDLMWALDQLRAVLAE
>NZ_CP029823.1|WP_107528509.1|6416375_6416798_+|IS200/IS605-family-transposase
MTRKVRRFSGGVYDLGLHVVWCPKYRRPVLDGRVAERLDELIRHKADERGWEIVALDVMPDHVHLFVKHDPKSSASYVANQFKGSTSRVLREEFPHLKSRMPTLWSSSYFAASVGAVSAATVEKYIDTQWERPGKKGDGS
>NZ_CP029823.1|WP_099014056.1|6416794_6418003_+|transposase
MIRAYTFLLRPTARQTAALGEMLRDHCSLYNGALQERRGAYRHTSKTTVRYGDQSAQLKDIRAFDPERQGRWSFSSQQATLRCLDKAFAAFFRRVKAGQTPGYPRFKGVGHFDTVVFPRDGDGCRWDSTPHDPRTRVRLQGVGHVRVHQHRPVQGRVKTISVKREGSRWYVVLACDEVPAQELPPTGAIVGIDMGLAHFLTTSGGEHVGNPRFLQAMADELAGAQRHLATFPKRTRQRAKKHRAAARKVAKLHGKIRRQRADFHHKTARALITGHDVIAHERLNTAGLTKSPAPKADPGRPGGFLPNGAAAKAGLNRGILDAGWAQFLGILANKAESAGRLVVPVDARNTSRTCPDCGHVAKENRVTQERFQCTACGFAANADHVGATNVLNRAGLVLCAAA
>NZ_CP029823.1|WP_099016967.1|6418217_6419489_+|serine-hydroxymethyltransferase
MSLPLSHPALSAADPELASLVGAEELLQSETLRLIASENYVSAAVLEASGTVLQNKYSEGYPGRRYYEGQQVIDQVETLAINRAKALFGAEHANVQPYSGSPANLAAYLAFARPGDTVMGMALPMGGHLTHGWGVSATGTWFRGVRYGVRQDTGMIDFDQVRELAREERPKLIFCGGTAVPRTIDFAAFAEIAHEVDAVLIADVAHIAGLIAGGAHPSPVPYADVISTTTHKTLRGPRGAMLMSRETHAKAIDKAVFPGLQGGPHNQTTAAIAVALHEAAQPAFHDYAHAVVANAKALAEELLARGFELVSGGTDNHLILMDLTPKEVPGKVAAKAMDQAGIVVNYNTVPYDPRKPFDPSGIRIGTPSLTSRGLSTEHMPAVAEWMDRAVTAAKSGDEGALAKIRAEVSELMAAYPAPGLPTG
>NZ_CP029823.1|WP_099016966.1|6419458_6420511_-|RNA-polymerase-sigma-factor
MIARVRTGDAEAYAELVRAHAPIAHRTARLLGAGADAEDVVQDAFVKAYLALGRFQSEASFRPWLLRIVAHETSNAVRSARRRRTAVDREGALLAGAEPVIPESADPAAVALAGERRARLLAALERLSEPQRRVVIYRYLLDLDEAETAEALGWPRGTVKSRLSRALRRLEQLLGPSERADETADEAGWTAEGTGWTAGGTAGGMADAPEWTADGTEWGGEGDGRGRAARRAAGARAGAGDTAVRRTVAARRVAGGRRGAGSEHAAGGRRGFGGRQGPGGPGGSQGSGGRRPPGRRGDAGRAGARPDRGPSGAGGRRPDPGGAVVAAPARPGGRAGARARRQPVGRPGAG
>NZ_CP029823.1|WP_069870693.1|6420584_6421598_+|tryptophan--tRNA-ligase
MALDRPRALSGIQPTAGSFHLGNYLGAIRQYVALQETHDAFYTVVDLHAITVPQDPAELRANSRLAAAQLLAAGLDPDRCTLFIQSHVPEHAQLGWVMNCLTGFGEASRMTQFKDKSARHGADRATVGLFTYPILQVADILLYQANHVPVGEDQRQHIELTRDLADRFNGRFGEVFTVPEPYIVKETGKIYDLQDPAIKMSKSASTPKGIVSLLDEPKVSAKKIKSAVTDLETEIRYDEEKKPGVSNLLTIYSTLTGTEIPELERRYEGKGYGALKTDLSEVLVEWVTPFRERTQEYLADPATLDGILAKGAEKARAVAAETLAAAYDKVGFLPAAR
>NZ_CP029823.1|WP_079257977.1|6421835_6422435_+|2'-5'-RNA-ligase-family-protein
MGTVTLGVSIAVPEPYGSFLQERRAGFGDPAAHGIPTHVTLLPPTEVDASVLPAVEDHLARVAAEGRPFPMRLEGTGTFRPLSPVVFVRIVEGAEECAVLQERIRMESGPCARELQFPYHPHVTIAHGIDEEAMDRAFVELKEYEAAWTITGFALYEQGADGVWRLDREYPFGADEQPDGASPVVPRQAALSRPAAPSH

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Crispr_ID: NZ_CP029823_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_9

6486225-6486334

Orphan

Consensus_repeat	Method
GCTGCTCAAATGCGCCGAAGGCGCGAGACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP029823_9

>merge|NZ_CP029823|9|6486225-6486334|CRISPRCasFinder
GCTGCTCAAATGCGCCGAAGGCGCGAGACGGCGCCGCACCCGACGACGAACACGGCCCCGCCGCGCCCCACCCCCGCCCTGCTGCTCAAGTGCGCCGAAGGCGCGAGACG

>NZ_CP029823|9|7|6486225-6486334|CRISPRCasFinder
GCTGCTCAAATGCGCCGAAGGCGCGAGACG	GCGCCGCACCCGACGACGAACACGGCCCCGCCGCGCCCCACCCCCGCCCT
GCTGCTCAAGTGCGCCGAAGGCGCGAGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_079153557.1\|6486445_6487210_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224423
NZ_CP029823.1\|WP_099014028.1\|6489914_6490529_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_079257948.1\|6477099_6478824_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226364
NZ_CP029823.1\|WP_069870292.1\|6492209_6492896_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP029823.1\|WP_069870300.1\|6488961_6489165_-\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200
NZ_CP029823.1\|WP_069870317.1\|6478820_6479948_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226962
NZ_CP029823.1\|WP_079257942.1\|6493087_6493870_+\|SigE-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|132028
NZ_CP029823.1\|WP_079257943.1\|6487313_6488480_+\|adenosine-deaminase	unknown	unknown	gnl\|CDD\|236480
NZ_CP029823.1\|WP_099016961.1\|6484145_6485462_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340882
NZ_CP029823.1\|WP_099014027.1\|6494014_6494656_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223645
NZ_CP029823.1\|WP_069870302.1\|6488604_6488835_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235082
NZ_CP029823.1\|WP_099014031.1\|6473026_6474211_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099014029.1\|6489225_6489801_-\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
NZ_CP029823.1\|WP_099014030.1\|6481693_6482971_+\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276
NZ_CP029823.1\|WP_079257946.1\|6481236_6481659_+\|cytidine-deaminase	unknown	unknown	gnl\|CDD\|180142
NZ_CP029823.1\|WP_069870319.1\|6476015_6477050_+\|BMP-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380577
NZ_CP029823.1\|WP_069870325.1\|6471977_6472910_+\|N-acetylneuraminate-synthase	unknown	unknown	gnl\|CDD\|376990
NZ_CP029823.1\|WP_079257947.1\|6479944_6481240_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224005
NZ_CP029823.1\|WP_069870321.1\|6474421_6475642_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349936
NZ_CP029823.1\|WP_099016960.1\|6490525_6492100_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_079153557.1\|6486445_6487210_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	5.34631e-06
NZ_CP029823.1\|WP_079257948.1\|6477099_6478824_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226364	COG3845, COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only].	0
NZ_CP029823.1\|WP_069870292.1\|6492209_6492896_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.21055e-81
NZ_CP029823.1\|WP_069870300.1\|6488961_6489165_-\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	6.22859e-22
NZ_CP029823.1\|WP_069870317.1\|6478820_6479948_+\|ABC-transporter-permease	gnl\|CDD\|226962	COG4603, COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.44305e-79
NZ_CP029823.1\|WP_079257942.1\|6493087_6493870_+\|SigE-family-RNA-polymerase-sigma-factor	gnl\|CDD\|132028	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family. This group of similar sigma-70 factors includes the sigE factor from Streptomyces coelicolor. The family appears to include a paralagous expansion in the Streptomycetes lineage, while related Actinomycetales have at most two representatives.	2.63234e-65
NZ_CP029823.1\|WP_079257943.1\|6487313_6488480_+\|adenosine-deaminase	gnl\|CDD\|236480	PRK09358, PRK09358, adenosine deaminase; Provisional.	1.05246e-154
NZ_CP029823.1\|WP_099016961.1\|6484145_6485462_+\|MFS-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.2627e-71
NZ_CP029823.1\|WP_099014027.1\|6494014_6494656_-\|ATP-binding-protein	gnl\|CDD\|223645	COG0572, Udk, Uridine kinase [Nucleotide transport and metabolism].	1.0771e-21
NZ_CP029823.1\|WP_069870302.1\|6488604_6488835_+\|hypothetical-protein	gnl\|CDD\|235082	PRK02888, PRK02888, nitrous-oxide reductase; Validated.	4.71127e-05
NZ_CP029823.1\|WP_099014029.1\|6489225_6489801_-\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	3.38445e-13
NZ_CP029823.1\|WP_099014030.1\|6481693_6482971_+\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
NZ_CP029823.1\|WP_079257946.1\|6481236_6481659_+\|cytidine-deaminase	gnl\|CDD\|180142	PRK05578, PRK05578, cytidine deaminase; Validated.	3.02494e-68
NZ_CP029823.1\|WP_069870319.1\|6476015_6477050_+\|BMP-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380577	cd06354, PBP1_PrnA-like, periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea. Periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea. The PnrA lipoprotein, also known as Tp0319 or TmpC, represents a novel family of bacterial purine nucleoside receptor encoded within an ATP-binding cassette (ABC) transport system (pnrABCDE). It shows a striking structural similarity to another basic membrane lipoprotein Med which regulates the competence transcription factor gene, comK, in Bacillus subtilis. The members of PnrA-like subgroup are likely to have similar nucleoside-binding functions and a similar type 1 periplasmic sugar-binding protein-like fold.	2.27805e-85
NZ_CP029823.1\|WP_069870325.1\|6471977_6472910_+\|N-acetylneuraminate-synthase	gnl\|CDD\|376990	pfam03102, NeuB, NeuB family. NeuB is the prokaryotic N-acetylneuraminic acid (Neu5Ac) synthase. It catalyzes the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesize the 9-phosphate form, Neu5Ac-9-P, and utilize ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.	1.27511e-114
NZ_CP029823.1\|WP_079257947.1\|6479944_6481240_+\|ABC-transporter-permease	gnl\|CDD\|224005	COG1079, COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only].	1.28689e-78
NZ_CP029823.1\|WP_069870321.1\|6474421_6475642_+\|amidohydrolase	gnl\|CDD\|349936	cd08014, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of uncharacterized bacterial proteins predicted as putative amidohydrolases. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	3.83346e-176
NZ_CP029823.1\|WP_099016960.1\|6490525_6492100_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.00014e-54

>NZ_CP029823.1|WP_099016961.1|6484145_6485462_+|MFS-transporter
MSTNVMSTNSNPSAPSAPSASDAANAPVPERMRPGRPGYSRMRLALFTAGLATFALLYSTQALLPAISDDLRVQADQASWSVSASTFGLALAVIPLSALSERFGRRAMMTVSLTVAVALALLVPFAPDLGWLIALRAVQGAALAGIPASAMAYLSEEVHPKALVGTIGLFVAGNSVGGMSGRILTGWVADAWGWRVALAAVGVMAVVCAVAFRMLLPRPRHFTPAEVSPRALARTLAGHLSDPLLCRLYAIGALFMTVFGGVYTVIGYRLVAQPFGLSQSLIGSIFLIYLVGTFSSAATGKLVGRLGRRGALYAAVSTTAAGLLLSLLNSIPAVLAGLVLITAGFFAGHAAASSAVSRTAKTGRAQAAALYQASYYIGSSVGGALGALAFHAAGWGGTVAMGLVAVVGAAGITLYATRQARAERRAEVARRELCGVPS
>NZ_CP029823.1|WP_099014030.1|6481693_6482971_+|thymidine-phosphorylase
MDAISVIRAKRDGTRLTDAQIDWVIDAYTRGEVADEQMSALAMAIFLNGMDRAEIARWTAAMIASGERMDFSSLPRPTADKHSTGGVGDKITLPLAPLVAACGAAVPQLSGRGLGHTGGTLDKLESIPGWRAQLSGADMLAVLRDVGSVICAAGEGLAPADKKLYALRDVTGTVESIPLIASSIMSKKIAEGTGSLVLDVKVGSGAFMKDIDSARELAATMVGLGNDHGVRTTALLTDMSTPLGLTAGNALEVRESLEVLAGGGPADVVELTLALAREMLDAAGLPDADPAKALADGTAMDHWRRMISAQGGDPDAPLPTAREHHVVTATADGVLTRLDAYAVGLAAWRLGAGRARKEDPVQAGAGVELHAKPGDRVTPGRPLLTLHTDTPSAFAYALEALENAIDYAPENSEFTASPIVLDRIA
>NZ_CP029823.1|WP_079257946.1|6481236_6481659_+|cytidine-deaminase
MTTSAAAAPDWESLRVRARDAMSRAYAPYSGFPVGAAALVDDGRTVSGCNVENAAYGVALCAECGLVSSLVASGGGRLTAFTCCDREGAVLMPCGRCRQLLWEHGGPELQMDTATGIRPLAELLPDAFGPADLRRPAAHG
>NZ_CP029823.1|WP_079257947.1|6479944_6481240_+|ABC-transporter-permease
MSATVTTTKSTSAPGKGNGPASRMSLGKVLLIVAGALIALSVLRTLVDAAQQADFDRVTSAGQIGAALSMAVPIGLAGLGGLWSERAGVVNIGLEGMMILGTFFGAWAGYQTNPWVGVLAGVLGGAVGGLVHAVATVTFGVDHIISGVAMNILALGATTYLAKRWFEPLADIGGSPKNSPQVDPIQTFTVPGLSDWLADLENHHWFLVSDIAGVLGGLVTDISALTIVSVLLVVGSFFALWRTSFGLRLRSCGENPTAAESLGVNVYLYKYAAVVISGALAGLGGVFLALVRSHIYNEGQTGGRGYIGLAAMLFGNWRPGGLAMGAGLFGYSDALQLRNGGATVHALLLLVALGLAALAAWRIVRKSYVAGAVSGAAAVALLLWYALTDTVPNDLVSATPYIVTLLVMGLASQRLRMPKANNRPYRKGQGT
>NZ_CP029823.1|WP_069870317.1|6478820_6479948_+|ABC-transporter-permease
MKKLDKERVLLAVAAPVLALAAAFVLTALVLLATGKEPFNAFGIMFDYGMKADSQVYILNKATTYYLAGLAVAIGFRMNLFNIGVDGQYRLAAFFAAVVGGALGLPGLVQIPLILLVGMLVGAMWASIAGLLKVYRGVSEVISTIMLNSLSGIVISYLLVDGRLADLDKQTNIVATDPLPSSSHFFTIPAGGDLDPIWGFIVVAALAGVGFWFLLGRTRFGFDLRAVGRSESAAQASGVNVKRMVLTSMVLSGAMAGLIGMPTLLNDTHQFTSDFPTGIGFTGIAIALLGRNNPVGIALAAVLWGFLERGANRLEFEGYDKEIVGVMQGVIVLCVVIAYELVRRYGLKRQQQRVGAELAAQARADKGSDKQEVPA
>NZ_CP029823.1|WP_079257948.1|6477099_6478824_+|ABC-transporter-ATP-binding-protein
MAYPGRSGPRPAPPPVAPQECAIKAASPPKGAPAGAVTDVAVELHGITKRFPGVVANHDIDITVRRGTVHALVGENGAGKSTLMKILYGMQRPDEGTIAIDGKTVELHSPADAISRGVGMVHQHFMLADNLTVLENVVLGAEKLHGIGGRARARIKEISDAYGLGVRPDVLVEDLGVADRQRVEILKVLYRGARTLILDEPTAVLVPQEVDALFDNLRELKSEGLTVLFISHKLGEVLSVADDITVIRRGTTVASVVPSETSPRQLAELMVGSELPSPETRESTVTDTDMLVVGALRLTATDVDGVQRAVLDDIDFTIHKGEVLGIAGVEGNGQAELVEAIMGMRDPDAGTITLDGADISHAPTRKRREDGIGYIPEDRHRHGLLLEAPLWENRILGHVTEVPNSKGGLLNPAAARRDTERIVAEYDVRTPGIEVTAASLSGGNQQKLIVGREMSHHPKLLIAAHPTRGVDVGAQAQIWDQIRAARREGLAVLLISADLDELIGLSDTLRVMYRGRLVADADPATITPEQLGSAMTGAASGHLEDSADDGTEAATGTASGTGPAAEAATGGEDR
>NZ_CP029823.1|WP_069870319.1|6476015_6477050_+|BMP-family-ABC-transporter-substrate-binding-protein
MRRVSTIAVAGIATAALALSVTACGSSSEEGSKDAGIGLAYDVGGRGDHSFNDSAAKGYDKALKDFDVKGKELTAKDGDTDADRYDKLASLAEAGYNPVIGVGYAWTPSLTKAAKKYKDTDFAIVDSVVDAKNVASLVSAEHEGSYLAGVAAGLKTKSDKVGFIGGTDSALIKKFAGGFQQGLKETNPKASLDVQWVQVGSPKGFGMPDRGKDIAEGMLSNKVDVIFSAAGGSGAGAIEATAGKKGTWSIGVDGDQYYDKGLAQYKNTILTSMIKTVDGSVYDFIQSVVKDKKPESGVQTYDLKRGGVSLSYSGGFINDIKPKIEAAKKKIIDGQIKVQDTYKD
>NZ_CP029823.1|WP_069870321.1|6474421_6475642_+|amidohydrolase
MSLDATDATPATAPALPGTLPDELRTELIAFRRDLHMHPELGNCEFRTTAAIKARLEQAGLEPRVLPSGTGLICDIGPRDGVAPLLALRADIDGLPIPDTKTVDYRSTVADRAHACGHDVHTTVVLGAGLVLAQLAREGRLARPVRLLFQPAEEVLPGGAADAIEAGVLDGVGRILAVHCDPKVEVGRIGLRIGPITSACDRLEVSLDGPGGHTARPHMTTDLVTAAAKVITEVPALLARRVDARSGLAVTWGRVESGHACNVIPQHAELSATVRCLDLPAWREAPDLVHAAVDEIATLHRAKSEINYIRGVPPVVNEASSAELLRDAMIARRGASAVEDTEQSLGGEDFSWYLERVPGAMARLGVRKVGDTTRRDLHAGDFDVDEGSIAVGVELFTAAVLLDRNA
>NZ_CP029823.1|WP_099014031.1|6473026_6474211_+|hypothetical-protein
MVSAAPLAPQATLAFVESPVQLLNVLEWAYSDVQRARRAGGPAATAPQDLTVVVLSPHDPMTRGQLRRMAELARDEGVIVRWEDARGGAGAPIKTIGGLRGPLRRAARIVIGDPFSRYVQLLLTLTRAKDLVVVDDGTATMEFISQLAKGEPLVRWHRRGSHGPRDLVFAPVSATARRRLTPGDKRRVEVFSSMPVEPPAGVTITANDFAWTRSRFGPPRLTGGTDLVGTSLVETGVVDLERYLEAVGSLTRAHGATRYFAHRRESTEKLSRIAHEVGLEIVRPDLPLELIARRGPIGHTIVSFPSTVVHTLPLALVGTGVEVAVCDVDPAWLTSNASPRAQGFLSGVTGTARDVRRLNSGPTAGSPPPRDAAPPRDPAPPANPGPPAAPVAAS
>NZ_CP029823.1|WP_069870325.1|6471977_6472910_+|N-acetylneuraminate-synthase
MSSNSRLRTLGEKIAGPGHPVYVTGEIGINHNGDLENAFKLIDVAAEAGCDAVKFQKRTPEICTPRDQWDIERDTPWGRMTYIDYRHRVEFGEDEYRAISEHCKKRGIDWFASPWDTEAVAFLEKFDVPAHKVASASLTDDELLRALRATGRTIILSTGMSTPKQIRHAVEVLGSDNILLCHATSTYPAKAEELNLRVINTLQAEYPNVPIGYSGHETGLQTTLAAVALGAAFVERHITLDRAMWGSDQAASVEPQGLQRLVRDIRIIQESLGDGVKKVYESELGPMKKLRRVAGVVAESEAADREPAAV
>NZ_CP029823.1|WP_079153557.1|6486445_6487210_-|alpha/beta-fold-hydrolase
MAQQALPERGARLGRPMGAAAARRTVHGVVLLLPEGEPNGTRRPSRLSVAATLPLARRLVRAGREEGLAAHVVHYRRRGWNGVAADAASDAAWAVEEVVRRYGDVPICLIGHGMGGRAALRAAGHAAVTSVVALAPWLPAPDELLEPEPVKQLVGRQVLIAHGTNDERTDPELSYRLAERAKKANRDVCRFEVHTDGHGLHQHRSEVQALAVDFLLGTLFHSGFSRPVADALAAPPPLGLRMPLASGFGANLGH
>NZ_CP029823.1|WP_079257943.1|6487313_6488480_+|adenosine-deaminase
MTSEHSHEPTPEQIRRAPKVLLHDHLDGGLRPGTIVDLARETGYDALPETEPDKLGVWFREAADSGSLERYLETFSHTVGVMQTRDALVRVAAECAEDLAEDGVVYAEIRYAPEQHLEGGLTLEQVVEAVNEGFREGERRAFENGHRIRVGALLTAMRHAARALEIAELANRYRDLGVVGFDIAGAEAGFPPTRHLDAFEYLKRENNHFTIHAGEAFGLPSIWQALQWCGADRLGHGVRIIDDIEVADDGSLNLGRLASYVRDKRIPLELCPTSNLQTGAASSYAEHPIGLLRRLHFRATVNTDNRLMSGTSMSGEFQHLVSTFHYTLDDMQWFTVNAMKSAFIPFDERLAMINDVIKPGYAELKSEWLFRDVASASAVTRGSAAAGD
>NZ_CP029823.1|WP_069870302.1|6488604_6488835_+|hypothetical-protein
MKQGTLKTLGAIALGAAAVVAAGGAASAAPAPGAGSVGAPGQSAAKPAVPQAKPGQGMLGQLPLSGLPTGNLIKLG
>NZ_CP029823.1|WP_069870300.1|6488961_6489165_-|PspC-domain-containing-protein
MSAPLVRPRHDKKIAGVCAGLARRFGTTPTTMRVLFVVSCLLPGPQFLLYLALWFLLPAEDSYREAW
>NZ_CP029823.1|WP_099014029.1|6489225_6489801_-|VanZ-family-protein
MQGPFGRRAAFRYRAAGFLLLVAHLSFVCWLTLRPVNVPWVSPATLEPLATIRADLALSPWSAARSIGGGLLLLAPLGVLLPLAAGRVEVYPLASLVRTAFTGAMVALGVALLRSEVTGQIMNMDSVLLNTAGVVLAHLLVVPAVRACLRRRAYRRRTAPLPRDDGTQAPTPTIPRVGIAPWSDVSSGTRT
>NZ_CP029823.1|WP_099014028.1|6489914_6490529_-|hypothetical-protein
MSARWKRSAALLLTGAVALLAAGCGIRGTSVPVDAGAAPSRASCRAPASEQTAEGIGRTSVRIYLLCSSRILSVSRAARLGDEKTAPEPVRVAQALLEQLRLPPTAAEAAAGFSTAVEDWVEITGPAKDDPDNALRLNRPPEEIQSLALAQIICTFADTAVAGDDGKVVLGGPDSQRDPLKAYQCTEEMRRNPVIAVNSGVLVS
>NZ_CP029823.1|WP_099016960.1|6490525_6492100_-|HAMP-domain-containing-histidine-kinase
MRWFSLRLRLMLVFGLVALTAAVSASAIAYWLNRDAVLTRTQDAALDEFRKSLKDDTDPLPSLPTCSELRDVAVRMADNTQKYEVLLITRTRDGESCPAASDKKLFTLDAVPAALRRAVDQKRPVSKGNSAPYHLYWQRITLHGTPYLVGGAKVNGGGPTGYMLKSLDTERQDLNSLAWSLGIATGLALIGAALLAQAAAATVLRPVQRLGEAAHRLGEGHLDTRLQVSGSDELANLSHTFNRAAERLQKRVAELSAREASSRRFVADMSHELRTPLTAITAVTEVLEEEADSLDPMIAPAVQLVVSETRRLNDLVENLMEVTRFDAGTARLVLDDVDVADQVTACIDARAWLDAVELDAARSIVARLDPRRLDVILANLIGNALKHGGSPVRVSARTEGDELLIRVRDHGPGIPEDVLPHVFDRFYKASASRPRSEGSGLGLSIAMENAHIHGGDIGAANSPEGGAVFTLRLPMDASRIASDEAADDPDRDRDGAFAGDGDDDGGGGDNGPAKGPGRNEGGRP
>NZ_CP029823.1|WP_069870292.1|6492209_6492896_-|response-regulator-transcription-factor
MTNVPFLLLIEDDDAIRTALELSLSRQGHRVATAATGEDGLKLLREQRPDLIVLDVMLPGIDGFEVCRRIRRTDQLPIILLTARSDDIDVVVGLESGADDYVVKPVQGRVLDARIRAVLRRGEREANDSAAFGNLLIDRAAMTVTKNGEDLQLTPTELRLLLELSRRPGQALSRQQLLRLVWEHDYLGDSRLVDACVQRLRAKVEDVPSSPTLIRTVRGVGYRLDAPQ
>NZ_CP029823.1|WP_079257942.1|6493087_6493870_+|SigE-family-RNA-polymerase-sigma-factor
MSTLHFTNTSAVRTRLHDAGRGNEKSGAVSGRGCARGAGRQRPPYMVAIDAITGDKEAGTGLGGDDGGPGGHGGGSYGEAEGERRTTSEAEFTAYVQERRASLYATAYHLTGDRFEAEDLLQSALFSTYRAWDRISDKAAVGGYLRRTMTNLHISAWRRRKLNEYPTEELPETVGDHDAMRGTELRAVLWQALARLPELQRTMLVLRYYEGRTDPEIADILNISVGTVKSSIWRSLRRLREDEILSFGRDEEESFGELVA
>NZ_CP029823.1|WP_099014027.1|6494014_6494656_-|ATP-binding-protein
MTSQPPSARVVLLSGPSGSGKSSLAARAGLPVLNLDDFYKGGGDPTLPQLADGGGADWDSPLSWDADAAVAAVEALCRTSRTTVPLYDIATSARVGEEALDIGPAPLFIAEGIFAADIIGRCADLGVLADALCLRGRPSTTFRRRLLRDLREGRKPALYLLRRGWRLMRTERGIVARQTALGAYACGKGVALGRIAAAAAGGPVPAPGQKASV

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Crispr_ID: NZ_CP029823_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_10

7192157-7192250

Orphan

Consensus_repeat	Method
GGCAATTCAAGCCGGTCCGGCGTTTGAGGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP029823_10

>merge|NZ_CP029823|10|7192157-7192250|CRISPRCasFinder
GGCAATTCAAGCCGGTCCGGCGTTTGAGGACCAGGGTCTTGGGGCGGAGCCCGTGGCCGGTGGGGCAATTCAAGCCCGTCCGGCGTTTGAGGAC

>NZ_CP029823|10|8|7192157-7192250|CRISPRCasFinder
GGCAATTCAAGCCGGTCCGGCGTTTGAGGAC	CAGGGTCTTGGGGCGGAGCCCGTGGCCGGTGG
GGCAATTCAAGCCCGTCCGGCGTTTGAGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_069864134.1\|7092362_7092929_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099013778.1\|7239876_7240086_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP029823.1\|WP_142881432.1\|7238534_7238873_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099013789.1\|7120019_7130399_+\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|225858
NZ_CP029823.1\|WP_079152982.1\|7090298_7090958_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP029823.1\|WP_099013775.1\|7244396_7247435_+\|lantibiotic-dehydratase	unknown	unknown	gnl\|CDD\|377403
NZ_CP029823.1\|WP_099016938.1\|7247437_7248577_+\|lanthionine-synthetase-C-family-protein	unknown	unknown	gnl\|CDD\|271201
NZ_CP029823.1\|WP_099013786.1\|7161548_7177301_+\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|225858
NZ_CP029823.1\|WP_099013790.1\|7095348_7119972_+\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|225858
NZ_CP029823.1\|WP_079257701.1\|7092998_7093508_+\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|225937
NZ_CP029823.1\|WP_099013779.1\|7239025_7239880_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP029823.1\|WP_099013781.1\|7238319_7238535_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_069864140.1\|7093504_7095049_+\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|225962
NZ_CP029823.1\|WP_079152983.1\|7090950_7092195_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP029823.1\|WP_099013783.1\|7209132_7226481_+\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|225858
NZ_CP029823.1\|WP_099013784.1\|7199455_7209076_+\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|225858
NZ_CP029823.1\|WP_099013776.1\|7244162_7244327_+\|FxLD-family-lantipeptide	unknown	unknown	gnl\|CDD\|275157
NZ_CP029823.1\|WP_099013787.1\|7156289_7161284_+\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|225858
NZ_CP029823.1\|WP_099013777.1\|7241362_7241830_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239217
NZ_CP029823.1\|WP_099013788.1\|7130424_7156224_+\|type-I-polyketide-synthase	unknown	unknown	gnl\|CDD\|225858

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_099013778.1\|7239876_7240086_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	1.12511e-21
NZ_CP029823.1\|WP_099013789.1\|7120019_7130399_+\|type-I-polyketide-synthase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP029823.1\|WP_079152982.1\|7090298_7090958_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.51493e-76
NZ_CP029823.1\|WP_099013775.1\|7244396_7247435_+\|lantibiotic-dehydratase	gnl\|CDD\|377403	pfam04738, Lant_dehydr_N, Lantibiotic dehydratase, C-terminus. Lantibiotics are ribosomally synthesized antimicrobial agents derived from ribosomally synthesized peptides. They are produced by bacteria of the Firmicutes phylum, and include mutacin, subtilin, and nisin. Lantibiotic peptides contain thioether bridges termed lanthionines that are thought to be generated by dehydration of serine and threonine residues followed by addition of cysteine residues. This family constitutes the N-terminus of the enzyme proposed to catalyze the dehydration step, via glutamylation of the substrate during lantibiotic biosynthesis. The enzyme dehydrates Ser/Thr residues in the precursor by glutamylation.	0
NZ_CP029823.1\|WP_099016938.1\|7247437_7248577_+\|lanthionine-synthetase-C-family-protein	gnl\|CDD\|271201	cd04793, LanC, Cyclases involved in the biosynthesis of lantibiotics. LanC is the cyclase enzyme of the lanthionine synthetase. Lanthinoine is a lantibiotic, a unique class of peptide antibiotics. They are ribosomally synthesized as precursor peptides and then post-translationally modified to contain thioether cross-links called lanthionines (Lans) or methyllanthionines (MeLans) in addition to 2,3-didehydroalanine (Dha) and (Z)-2,3-didehydrobutyrine (Dhb). These unusual amino acids are introduced by the dehydration of serine and threonine residues, followed by thioether formation via addition of cysteine thiols, catalysed by LanB and LanC or LanM. LanC, the cyclase component, is a zinc metalloprotein, whose bound metal has been proposed to activate the thiol substrate for nucleophilic addition. Also contains SpaC (the cyclase involved in the biosynthesis of subtilin), NisC, and homologs.	5.65667e-94
NZ_CP029823.1\|WP_099013786.1\|7161548_7177301_+\|type-I-polyketide-synthase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP029823.1\|WP_099013790.1\|7095348_7119972_+\|type-I-polyketide-synthase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP029823.1\|WP_099013783.1\|7209132_7226481_+\|type-I-polyketide-synthase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP029823.1\|WP_099013779.1\|7239025_7239880_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.43763e-11
NZ_CP029823.1\|WP_069864140.1\|7093504_7095049_+\|PH-domain-containing-protein	gnl\|CDD\|225962	COG3428, COG3428, Predicted membrane protein [Function unknown].	4.83881e-47
NZ_CP029823.1\|WP_079152983.1\|7090950_7092195_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.57386e-53
NZ_CP029823.1\|WP_079257701.1\|7092998_7093508_+\|PH-domain-containing-protein	gnl\|CDD\|225937	COG3402, COG3402, Uncharacterized conserved protein [Function unknown].	1.6627e-20
NZ_CP029823.1\|WP_099013784.1\|7199455_7209076_+\|type-I-polyketide-synthase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP029823.1\|WP_099013776.1\|7244162_7244327_+\|FxLD-family-lantipeptide	gnl\|CDD\|275157	TIGR04363, hypothetical_protein, FxLD family lantipeptide. Members of this protein family occur with a cassette of lanthionine-type peptide modification enzymes. Members are small (about 60 amino acids long), rich in Cys, and variable in copy number per genome (from one to three). These features suggest that members of this family are modified to become lantipeptides, although not necessarily a lantibiotic. There is no GlyGly cleavage motif to separate a leader peptide from core region.The considerable abundance in Streptomyces and relatively strong consideration hints at a non-antibiotic function. The motif FxLD in the N-terminal region is nearly invariant.	3.01301e-07
NZ_CP029823.1\|WP_099013787.1\|7156289_7161284_+\|type-I-polyketide-synthase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP029823.1\|WP_099013777.1\|7241362_7241830_-\|NUDIX-hydrolase	gnl\|CDD\|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	2.06392e-15
NZ_CP029823.1\|WP_099013788.1\|7130424_7156224_+\|type-I-polyketide-synthase	gnl\|CDD\|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0

>NZ_CP029823.1|WP_099013786.1|7161548_7177301_+|type-I-polyketide-synthase
MANEETLRDYLKLVTADLHQTRLRLQEAEAKNHDPIAIVGIGCRYPGGVQSPEDLWRIVSEGVDAVSEFPLDRGWNVDTMYHPDPDHPGTSYVHEGGFVDGIADFDPSLFGISPREALGMDPQQRMLLETSWEAFERAGIDPVAVRGRQIGVFVGTSNHDYLGAILSSNENFEGYFGTGNAASVASGRLSYTFGFEGPAVTVDTACSSSLVALHLAVQALRNGECSLALAGGATLMCAPGVFVDYSKMRGLALDGRSKPFAPEADGFCLGEGVGMLLVERLSDAQRKGHPVLAVVRGSAVNQDGASNGLTSPNGPSQQRVILQALANARLSPDQVDAVEAHGTGTALGDPIEAQALLATYGQDRPEGKPLLIGSIKSNIGHAQAGAGVGGIIKMVMAMRHGQLPRTLHLTEPTPHVDWTAGDVELLTATREWVKDPEDATPRRAGVSSFGMSGTNVHTILEEAPAPAAPAENGEPEPERTEPPLVPVVLSGKNEQALRAQALRLRTHLAAHPGHRLADIGYSQAVTRAALDRRAAVVAADHDELLAGLDALAEGRHHPEATEGLAAEGKVAFLFTGQGSQRLGMGRELYETYPVFAEALDAVCAQLDRFLDQPLKGVLFGDDAATLDRTGFTQPALFAVEVALFRLVESWGLRPDFLAGHSIGELTAAHVAGVLSLTHACALVAARSQLMQQLPTGGAMIAVQASEDEVAPLLTERVSIAALNGPTSVVIAGDEDAAVAIAESFQAQGRKTKRLTVSHAFHSPHMDGMLENFRQVAERLTYEAPKIPIVSNLTGTLVSADEITTPDFWVRHVREAVRFLDGVRRLEDHGVTTFVELGPDGVLSAMAQECVTGDKNRTFAFLPALRSGRPEARTLGQALAQAHVRGVPVDWSRYYAGTGARRVELPTYAFQRQRYWPANPFSYGIDSAAAEAAAPALSDARFWEVVHSEDLPALVETLGLDGDQPLSEVLPVLSAWRRRSHVDTTVDSWRYRVTWTPLPQTPDKPLTGTWLVAAPEGRDDDPWVAEPLRLLAERGVSVHRIDVDGTTVDRAALAERIRAALSPDPAAGADTARPDGVLSLLGLDERPHDQHPSLTAGLAGTLALVQALGDAEVDAPLWAATRGAVSVGRSDRLTSPEQAQLWGLGRTAALEHPERWGGLIDLPATADDRALGRLADILAGPEGISGEDHLAIRPQGIHARRLARAPHHETTGDGWTTHGTALITGGTGALGGHVARWLVAHGAQHILLVGRRGPDAPGAAGLRDDITALGAQVTIAACDVADRDALAGLLATVPADLPLTTVVHAAGVLDDGVLDAQTPRRMADVLRAKADAARHLDELTRGLDLSAFVLFSSMAATFGAAGQANYVAANAYLDALAERRRADGLPATSMAWGAWADGGMATDELVAERLRQSGLPALAPEPATAALGAALDLDETFSLVVDIEWDRFAPGLSGHRPNSLLAELSEARHAIEAARTATGGPAIPGRSTTLAQRLTDAGTDEERDQIALDFVRTQVAVVLGHPGPDSVEPSRAFRDLGFDSLTAVEIRNLLSTLTGLKLPATIIFDYPTPIALADHLQAELIGSRPAVTGASSVGVALDDDPIAIVGMSCRFPGGVRSPEELWRLLASGQDAVVDFPADRGWDLETLYDPEGTGEHTSYVREGGFLADAAEFDPVFFGISPREALAMDPQQRMLLETSWEAFERAGIDPTTLRGQQVGVFAGTNGQDYLPVILSAPDGSEGFMGTGNAASVMSGRVSYALGLEGPAVTVDTACSSSLVALHWAIQALRAGECSLALAGGVTVMSTPGSFVDFSRQRGLAADGRIKAFAAGADGTGWGEGVGMLLVERLSDARRNGHEVLAVVRGSAINQDGASNGLTAPNGPSQQRVIRQALAGAGLSPSEVDAVEAHGTGTKLGDPIEAQALLATYGRDRDADQPLWLGSIKSNFGHTQAAAGVAGVMKMVLAIQHGLLPQTLNVDEPTPHVDWSAGAVALLTEAREWPETGRPRRAAVSSFGISGTNAHTIIEQAPGYADEAEDAAPDAAPRSGVPATWVLSAKSPEGLRDQAARLRAHLDERPELDATDVAFTLATRRTAFEERAALVAEDRDGLLSGLAALAEGRTAAGLVRGSVSGGKVAFLFTGQGSQRLGMGRELYDAFPAFADALDEVCAHLDAHVERPLRDVLFGEDAEALDRTGFTQPALFAIEVALFRLVEAWGLKADFLSGHSIGELAAAHVAGVLSLADACTLVAARGRLMQELPAGGAMIAVQASEDEVAPLLTERVSIAALNGPTSVVIAGDEDAALEIAAGFESQGRKTKRLTVSHAFHSPRMDGMLDTFREVAEGLSYEAPRIPIVSNLTGTVVSAEEITTADFWVRHVREAVRFLDGVRTLEAQGVTTYIELGPDGVLTAMAQECVDAESDAAFAAALRKDRPEAEALLSAVARAQVRGVAVDWAAYYAGTGATQVVLPTYAFQRQRYWPKVSSLFLGDVAAVGLGEAEHPLLGASAELPDADGMLFTGRLALSTHPWLAGHTILDTVLLPGTAFVELAIRAGDHVGCDYLEELTLEAPLVLPAQGGVQLRLSVGAADGTGRRPLSLHSRPESLPAEEPWTRHATGVLSSGGRPEASFELSAWPPVDATEVELDGRYEGLLDIGFAYGPAFQGLRRAWQRGGEVFAEVALDEGTAEEAAAFGLHPALLDSALHAIGMGGLGNTGGEGRLPFAWTGVSLYASGASALRVRLTPAGNDGVRLEIADTTGAPVAAVETLGLRPVSAEQLQSARTAYHESLFRLEWTTTAGLADAAGADVPTDGRWAVLGADPFGLGTTAYGDLATLAAAVSAGTAPAPEYVVVSPSAELGEQSARAAHRAAAAALTAVQRWLEEERFGDAPLVVVTHGAVAAEADEPVADLAGAAVWGLLRSAQSENPGRFVLVDTDGREESLRALPAALASDEPQLAIRAGAVSVPRLARVAVEPEGDDARGLDPEGTVLVTGASGSLGGLVARHLVAERGVRHLLLVSRRGEQAPGAAELAAELVGLGAEVAWAACDVADRGALAATLATVPAEHPLTAVVHTAGVLDDGVIGSLTPERVDHVMRPKVDAAWNLHELTRDLDLTDFVLFSSSSGVFGGPGQGNYAASNAFLDALARHRSAQGLPATALAWGLWAGAGMGSTLDEADISRMRRAGLPPLPVAEGLALLDTALTVREASLVPMRVDLAALRNQPAISPLFRGLVRIPARRAVDAVAAGGETGLAGRLAGLSEPEQERLLLDLVRAQVATVLGYAGAETIGSGRAFKELGFDSLTAVELRNQLNTVTGLRLPATLIFDYPDPQVLARHLRTELVGTDSPAAHTPVPVVAVTDDEPIAIVAMSCRYPGGVTTPEELWQLLAAGEDGISRFPDNRGWDLEALYDPDPETQGTSYAREGGFLHDAADFDPAFFGISPREALAMDPQQRLLLETTWEAFERAGIDPLSVRGSRTGVFAGVMYHDYGSRLHAVPNEVEGYLGTGSSSSVVSGRVAYTFGLEGPAVTVDTACSSSLVALHLAAQALRQGECSLALAGGVTVMFTPGTFIDFSRQRGLARDGRCKSFAAAADGTGWGEGAGMLLLERLSDAKKNGHEVLAIVRGSAVNQDGASNGLTAPNGPSQQRVIRQALANARLTTGEVDVVEAHGTGTTLGDPIEAQALLATYGRERDAERPLWLGSVKSNLGHTQAASGVAGIIKMVLAMRHGLLPQTLHVDEPSPHVDWSAGAVSLLTEAREWPETGRPRRAAVSSFGISGTNAHAIIEQPPALEPGEPAVEPEALPYVPVLVSARTEDGVRAQARRLRSRIAAEPRTALTDLGFSLATTRAALEHRVALVAEGHDGADEVLGALDALARGEHPAQALRGVATEGKVAFLFTGQGSQRLGMGRELYGAFPRFAEALDEVCDELDRHLERPLKTVLFGEDAQALDRTAVTQPALFAVEVALFRLVEAWGLTPDYLAGHSIGEIAAAHVAGVFSLADACALVAARGRLMQELPGGGAMFAVQASEDEVAPLLTERVSIAALNGPMSVVIAGDEDAAAGIAAGFEAQGRKTKRLTVSHAFHSPHMDPMLADFRKLAEGLTFNAPKIPLVSCLTGTVAAADEIRLPEFWVRHVRESVRFLDGVRTLRDQGVTTFVELGPDGVLSAMGEDCLAETETETGTDGNTDARAVFVPTLRGGRSEAQALATALAQIHVRGAAPDWAAVYAGRGARRVELPTYAFQRQRYWLDVGISVEDVISAGLGTADHPLLGAAVELPDTGGFVFTGRLSLLTHPWLADHAVMDTVLLPGTAFVELALRAGHEAGCDTVEELTLQAPLVLPEQGAVQLRLELAAADESGRRPLTLHSRREDVPADEPWIRHATGFLAPSATSASSATSTPSASSATSTPSASGEQTVERVDLSVWPPADATALATDVFYEGAAAAGLGYGPVFQGLDAAWRRGDELFAEIRLPQGFEPQAAAYGVHPALLDAALHTLGLDPEGEGSEGARLPFAWTGVRLYAEGAASLRVRLRPGAEGVSLHLADGTGAAVATVDGLVLRPLSAEQLSASRAAYHESLFRPEWTALPGSATDIPLGERWVTLGAATGFTVAGERLDDHADLAALTTALDGGAPAPDVVVVPLTGVASFTATGGGESLTATDGAALLPATDGAAPLTATGGSASIADTARAAARNALDLVQNWLNDQRLADTRLVLVTRGAVAAAPGEDIADLVHTTVWGLVKSAQSENPGRFVLVDTDGTDASQRALPSVLATDEPQLALRSGTGHAYRLARVPALPDTPEPAGLGDPDGTVLLSGATGALGGLFARHLVAERGARRLLLVSRRGGEAPGAAELAAELGELGAEVTWAACDTADRDALAATLSAIPAEHPLTAVVHTAGVLDDGVISSLTGERIDTVLRPKVDAAWNLHELTRDLDLAAFVLFSSAAGAFGSSGQGNYAAANTFLDALAQHRHAQGLPASSLAWGLWAAADGMAGSLDASDVTRISRGGFEALGQDAGLALFDLAGTLSEAVLVPIRIDTGALRGQAAAGLLPPLLRGLVRTPVRRSADTGATGAGAVADSGAGSLAERLSGLSETERDRELLDVVRGHVAAVLGYATPDDVDAGRGFLDLGFDSLTAVDLRNRLGAAAGLRLPVTLIFDYPTPTALAGYLREELGLEGAAGHPPVHAELDKLEAILATIAPDDIERPGITTRLRDLLSKWNETQSATDSTAEDREIQSATADEIFDLLDDELGLS
>NZ_CP029823.1|WP_099013787.1|7156289_7161284_+|type-I-polyketide-synthase
MATANEAKLREYLKKVTTDLTAAHRRLQEVDDQAHEPIAIVGMSCRFPGGVSSPEELWQLMVSGGEAQTEFPADRGWDLQNLFDPDPDTPDTTYTREGGFLDDATRFDAAFFGISPREATAMDPQQRLLLEASWEAFERAGIDPASLRGSRTGVFAGMNASDYLTVAIDAQDDFGGHLGTGNASSVVSGRLSYVFGLEGPAVTVDTACSASLVALHLAVQSLRLGECSLALAGGVHVMSTPGLFIEFSRQRGLSEDGRCKAFSADADGFGPAEGVGVLLLERLSEARRNGHKVLAVVRGSAVNQDGASNGLTAPNGPSQQRVIQQALAGARLSGNDVDVVEAHGTGTSLGDPIEAQALLATYGQDRTEEQPLLLGSVKSNIGHTQGAAGIAGVMKMVLAMEHGVVPESLHIAEPSPHIDWSSGKIALVRSATPWPETGRPRRAGISSFGFSGTNAHTILEQAPAEEPGPVELVSKQPGVLPWVLSGKSEAALRAQAWRLLDRLHDEPALRPVDIGLSLATTRAALDHRGVVQGRDREELMAGLTALAEGGMAAGVERGSVVAGQTAFVFPGQGSQWVRMGVGLMDASPVFAARIEECAGALGEFTDWSLVDVLRGAEGAPSLERVDVVQPVLFAVMVSLAELWRSLGVVPAAVIGHSQGEIAAACVAGALSLKDAARVVALRSQAIGRVLAGKGGMVSVALPVAEVRERIAPWGEERISVAAVNGPSSVVVSGEPTALDELLASCEADEVRARRVPVDYASHSAQVELLREELLELLAPVQPKNAQVPFLSTVTGEWIDGPELDAEYWFTNLRRTVELEGAVRRLLDEGFGVFIESSAHPVLTMGVQETAEDAGVDAAAIGSLRRDEGGLDRFWASVGEAWSRGVNVDWDAVFDGTGARRVELPTYAFQQQRYWPEPAPARAAGEIGHDAVEAKFWAAVEAEDWQALAAELTVEGDQPMSAVLPALASWRKQAREQSAVDGWRYRVTWKPLAEERSPRLSGAWLVVVPGAPATENTDTWTDAVAGVLAERGADVRRIAVDTGVDGREELAERLRAALADADGTPFAGVVSLLAPAEGAHPEHPSLPAGTAAQLALIQALGDAGIGAPLWCLTRGAVSVGGSDRPASPEQALVWGLGRVAALEHLERWGGLIDLPETSDERALTRLVGLLASDGDEDQAAIRAAGVFGPRLVRAPLADTSTVRSWKPTGTTLVTGGTGRLGAQVARWLARNGADHLVLASRRGPEAPGAVELEAELTGLGAKVTLAACDVTDRAALAETLAAIPADQPLTAVVHTAAVIEDGVIEGLTTDQAERVLRLKVDATRHLHELTRDLDLTAFVLCSHFSATFGAPGQGNQAPGNAFLHAFAEQRRADGLPATALTFGPWGDGGTVDGAVGDRMRRHGINEMAPEPATATLQHALDRDETALTVIDMDWRRFTLAFTADRARPLLHDLPEAREVVEEMAAAETEGTGAAAGAALAGQLAALPETERERVLLDLVRSAVAAVLGHSGAQAIEAGRAFKELGFDSLTAVELRNRLGAASGLKLPPSLIFDHPTPAAVAAYLRAGIAPDEAADGTAVLDELDKLETALTGTAPDNITRARITMRLQSLLAKWNESDGTAVTAEPAAAAAAPERPAKDTVDAEQLQSASDEELFAFINKGLGRA
>NZ_CP029823.1|WP_099013788.1|7130424_7156224_+|type-I-polyketide-synthase
MTTPNEKLVDALRASLKETERLRKQNQQLTDASREPIAIVGMSCRFPGGVGSPEELWRLVADGQDAISGFPTDRGWDIESLYDPDPEREGTFYARGGGFLYDASRFDPGFFGISPREALAMDPQQRLLLETSWEAFERAGIDPASARGSRTGVFVGASTQAYGAGEYDLPEGVEGHLLTGTASSVASGRLSYAFGLEGPAATIDTACSSSSVALHLAVQALRQSECSLALAAGATVLSSPDVFVEFSRQRGLSADGRCKSFAASADGTGWSEGVAVLLVERLSDARRNGHPVLAIVRGSAVNQDGASNGLTAPNGPSQRRVIRQALENARLTPADVDAVEAHGTGTTLGDPIEAQALISTYGQERPEGRPLWLGSLKSNIGHTQNVAGIGGVIKMVMAMRHGVLPRTLHVDEPTPHVDWSAGEVSLLTEARPWPETGGPRRAGVSSFGVSGTNVHTIIEQAPESEPAETSVAPAVTPAVLPWVLSGRGAAALRAQAERLVAHVEAHDELRPVDVGYALATSRAAFEHRAVMVAEDRAGLLTGLGALARDESAPGLVEGSVAGGKVAFLFTGQGSQRLGMGRELYDAYPVFAEALDAVCAELDAHLERPLRDVLFGSDAEALDRTGFTQPALFAVEVALFRLVEAWGLKADFLSGHSIGELAAAHVAGVLSLADAAKLVAARGRLMQELPAGGAMIAVQASEDEVAPLLTERVSIAALNGPTSVVIAGDEDAAVAIAAGFEAQGRKTKRLTVSHAFHSPRMDGMLDAFREVAQGLSYEAPRIPIVSNLTGGVVSAEEITTADFWVRHVREAVRFLDGIRTLEAQNVSTFIELGPDGVLTAMAQDCVTGEDAGFISALRKDRPEAEALTTAVARAHVRGVAPDWAAYFAGTGAHGVDLPTYAFQRERFWLEPGAASVGDVASVGLELAGHPLLGAAVPLAESDGLVFTGRLGLDTHPWLAEHTVRDAVVVPGSAFVELAVRAGDQVGCDLLDELTLHAPLVLPARGGVRLQVTVGAPDGDGRRSFTVSSRAEDAAADTVWLRNAGGVLASGAPGPSFDLAQWPPTAAEAIEAEALYARLAEAGLRYGPLFQGVMAAWRRGDELFAEVRLDDDAKPGAEEFAVHPALLDAALHALHGREGARLTDVWQGVSLYAEGASALRVRIAPAGADTVSVALADATGEPVAAVDALRCRPLPDDLAGDADVVRRSLFQLDWVAPQTSSAGPDAATRRIVLGDDPFGLVTAGVAATSAPDLAALGASVEAGETAAPELVLASFAPVPSTPVSGGSDEGVAEAAHRAARRALALVQGWLADERFGDARLVIVTRGAMAADAEEGVTDLVHAPLWGLVRSAETENPGRFVLVDVAEAAEAAEAAGAAEAAGGVGAAEAAGTAGAAEVPGTFADALSDALATGEPELALRAGRPLAPRLTRATAPAAGSGSAPAAGSAAALGSTPTSDSAAAPNANSRPDATAFDADGTVLITGGTGALGRLLARHLVAEHGVRHLLLTSRRGADADGATELAAELRERGAEITLAACDAADRDALAATLAAIPAEHPLTAVVHTAGVLDDATAAALTPEQLERVLRPKVDAAWNLHELTRDLDLSAFVLFSAIAGTLGGAGQANYAAANVFLDALAAHRHAAGLPATSLVWGLWAQSGGITGDLTETDLLRLARSGMGALGDDEGMALFDAARRTGRTLLIPARLDLAALRSAAGSGPVPALLRGLIRTTGRRTAAGALGAGSSLAQRLRALSPNERRRTLLELVRGHVATALGHASADAIEARRAFKELGFDSLTAVELRNRLSAATGLKLPSTIVFDHPNPTVLADHLRAELLGPDIDGAGAEAEQADPALPATTASLADDPIAIVAMGCRYPGDVRSPEDLWQLVATGSDAITGFPVNRNWESQWAADGDEAPSEYARAGGFLHDADLFDAAFFGISPREALAMDPQQRLLLETSWEVFERAGIDPDALRGRSVGVFVGAAYSGYDAGLEQAGAEVAGHVMTGNAGSVMSGRIAYALGLEGPAVTVDTACSSSLVALHWAIQALRQGECTMALAGGVTVMTTPGHFAEFGRQGGLAADGRCKAFAAGADGTGWGEGVGMLLVERLSDARRNGHQVLAVVRGSAVNQDGASNGLTAPNGPSQQRVIRKALASAGLTSGDVDAVEAHGTGTTLGDPIEAQALLATYGQERDAERPLWLGSIKSNIGHAQAAAGVAGIIKMVMAMRHGVLPRTLHVDQPSPHVDWTTGDIALLTERVEWPETGRARRAAVSSFGISGTNAHTIIEQAPATTAEPAVAEAGRDGAGVLPYALSAKGADALRAQAERLYAHLTARPDLEPADVAHTLATGRAALDHRAVLVADGRGDLLRGLDALARGESAPGLVEGTVAEGETAFLFTGQGSQRLGMGRELYDAYPVFAEALDAVCDELDAHLERPLKTVVFGDDAEALDRTGFTQPALFAIEVALFRLVEAWGLKADYLSGHSIGELAAAHVAGVLSLADAAKLVAARGRLMQELPAGGAMIAVQASEDEVLPLLTDRVSIAALNGPTSVVIAGDEDAALEIAASFEAQGRKTKRLTVSHAFHSPRMDGMLDTFREVAEGLTYDAPRIPIVSNLTGAVVSAEEVTTADFWVRHVREAVRFLDGVRTLEAQGVTTYIELGPDGVLTAMAQECVTGGNAAFAAALRKDRPEAEALTTAVARAYVRGVAPDWAAYFAGTGAHRVDLPTYAFQHRRYWPEEPVASLAAAGVDGWRYQVAWKPLSLGSAARLSGVWLVVTPAGEAAADVWAHGVVRTLTERGAEVRRLDLADGDRAAIAERLRTAADGGAVAGVLSLLATGDDADALLPTAALVQAMGDAAIDAPLWCATRGAVSTGRPGELVDPARAQVWGLGRVAALELPDRWGGLIDLPETMTDRVLSRLAVVLAGAGDEDQIAVRASGVFGRRLARATARQVAESEGWRAHGTVLVTGGTGALGGQVARWLIDRGAGHVVLAGRRGLDAPGAAELRDELAASGARITVAACDVADREALAGLLADLPAEFPLTAVVHAAGVLDDGVLESLTPERFASVLHAKADAALALDELTRDLDLSAFVLFSSTSGTVGAAGQGNYAAANAFLDALAERRHAQGLPATSIAWGPWAAGGMAADEALEQRMRRAGMPPMDADLAIDALQRALDLGDAAVTVADVEWDRFAAGFTAGRPSPLLADLPEVRQAAARSAATAGEAAVVETASALARRLLGLPEAERHRALLDLVRTHVAEVLGHADVSDISAERAFREIGFDSLTAVELRNGLNAATDLRLPATLIYDYPTPLALADHLFAELLGGQAVATGGASPVAGAADGDDPIAIVAMSCRFPGGVRTPEELWRLLVSGTDVISDMPADRGWDLRTLYNPDPDVEGTSYVREGGFLHDAADFDPAFFGISPREALAMDPQQRLLLETSWEAFERAGIDPATLRGSTAGVFVGTNGQDYLSLLLGDSQGLEGHMGTGNAASVISGRLAYTFGLEGPAVTIDTACSSSLVALHSAIQALRGGECSIALAGGVTVMSTPGVFVDFSRQRGLAEDGRIKAFAAEADGTGWGEGVGMLLVERLSDARRNGHPVLALVRGTAVNQDGASNGLTAPNGPSQQRVIRQALAGAGLAPSEVDAVEAHGTGTRLGDPIEAQALLATYGRDRAEGQPLLLGSIKSNIGHTQAAAGVAGIMKMVLAMRHGVLPRTLHVDQPTPHVDWSAGDIELLTEAREWPETGHPRRAGISSFGFSGTNAHAVLEEAPAADTVEAADEGGAALPVLLSARTADGLRAQAEQLHGHLTARADLRPADLGYALAVGRSAFEERAALVAEDRDGLLSGLVALAEGRQAAGLVQGSVAGGRVAFLFTGQGSQRLGMGRELYYAYPAFAEALDAVCDELDAHLERPLKTVVFGEDAEALDRTGFTQPALFAVEVALFRLVEAWGLRPDFLSGHSIGELAAAHVAGVLSLADACRLVAARGRLMQELPAGGAMVAVQASEDEVAPLLGERVSIAALNGPTSVVIAGDEDAAVEIAASFEAQGRKTKRLTVSHAFHSPRMDGMLDAFREVAEGLTYEAPRIPIVSNLTGGVVSAEEITTADFWVRHVREAVRFLDGIRTLEARNVTTFIELGPDGVLTAMAQECVTDAASDAAFVSVLRKDRPEAEALTTAVARAHVRGVAVDWAAFYAGTGAVRLAPDELAELPTYAFQRQRYWPKVSSLFLGDVAAVGLGEAEHPLLGASAELPSADGMLFTGRLALSTHPWLADHTIMDTVLLPGTAFVELAVRAGDQVGCELLEELTLEAPLVLSQDGGVQLRLWVGAADDTGRRPLELHSRAEHLSAEEPWTRHASGVLASAGAPEASFELSAWPPADAAEVEIGDRYAELRDVGFAYGPAFQGLRRAWRRGGEVFAEVALDEGTAEEADAFGLHPALLDAALHALGLAGLGGTENEGRLPFAWTGVSLYASGAATLRVRMAAVGGDGVRLEIADATGAPVAAVDSLVLRPVSAKRLQSARTAYHESLYRVEWTTAGPVDAAVDAQWAVLGTDAYGLGATAYADLAALGEAVDSGAALPEYVVVPLANQARPGPFSDGAVLEGPGAANQACPAIEDTPEGRPGVHADGAVLEGPGAANQACPAIEDTPEGRPHPHADGAALEGPGAASPARPALEDRGLGAEPQVGGRGGIGENPTQAAHDATTQALHLLQTWLADDRFTDSRLVLLTSGAVATEAGEPVTDLAGAAVRGLLRSAQSENPDRLLLIDVDGDDSQAALPALPALSAALASGEAEVAVRQGVLKTPRLARAASAAESEPPEWNPDGTVLVTGASGSLGGLFARHLVAERGVKHLLLVSRRGDQAAGAAELTAELAELGATVSWSACDVADRDALAATLATVPAEHPLTAVVHTAGVLDDGVIGSLTPERVDHVMRPKVDAAWNLHELTRDLDLSAFLLFSSAAGVFGGPGQGNYAAANVFLDALAQHRAAQGLPATALAWGLWAGGGMGDTLDEADITRMRRAGVPPLPVAEGLRLFDAALTVDEASLVPMRLDLAALRNQPASSPLLRGLVRGPARRAVDAVAAGGETGLAGRLAGLSTAEQERLLLDLVRAQVATVLGYAGAETIGSGRAFKELGFDSLTAVELRNQLNTVTGLRLPATLIFDYPDPQVLARYLRTELVGEESAEVHTPVPVAAVTEDEPIAIVGMSCRYPGGVTTPEELWQLVIGATDAVSEFPVDRGWDLDALYSDDPDQVGTSYTREGGFLHDAADFDSDFFGINPREAMAMDPQQRLLLETSWEAFERAGIDPAAVRGSRTGVFAGVMYHDYLTRLTAVPEGLEGYLGTGGAGSIASGRVAYTFGLEGPAVTIDTACSSSLVALHLAAQALRNGECSMALAGGVTVMATPDTFIDFSRQQGLSTDGRCKSFAASADGTGWAEGAGMLLVERLSDARRNGHRVLAVVRGSAINQDGASNGLTAPNGPSQQRVIREALTSARLTTADVDVVEAHGTGTTLGDPIEAQALLATYGRNRPEGQPLWLGSLKSNIGHTQAASGVAGIIKMIMAMRHGVLPQTLHIDEPTPHVDWSAGDIELLTEARPWPELGRPRRAAISSFGVSGTNAHTIIEQLPAAEEIPATGPAAELPTVPWVLSGKSEAAVRGQAERLLTHLGTHPELNTMDIGYSLATGRAALERRAVVIGEDRDGLLSGLAALARGESAAGLVQGTAAEGKVAFLFTGQGSQRLGMGRELYDAYPVFAEALDAVCDELDAHLERPLKTVLFGEDAEALDRTGFTQPALFAIEVALFRLVAAWGLRADFLSGHSIGELAAAHVAGVLSLADAAKLVAARGRLMQELPAGGAMVAVQASEDEVLPLLGERVSIAALNGPTSVVIAGDEDEAVAIATSFEAQGRKTKRLTVSHAFHSPRMDGMLDAFREVAEGLSYEAPRIPIVSNLTGTVVSAEEITAADFWVRHVREAVRFLDGVRTLEAQGVTTYVELGPDGVLTAMAQECVTGDAAAFVSALRKGRTEPGALTAALAALHTRGLALDWSAYFAGTGARGVELPTYAFQRQRFWVENPEEVREAVAAMDSVDARFWEAVEREDLEALAGTLQSEDADADALSSLGAVLPMLSSWRRRQGERSTVDAWRYQVTWKPVAARAEGTLTGRWLVVAPADASAGGAYGVLAEGVVRTLSARGAEVQLVEPTAEDRTGLAELLREAVADAPVAGVFRLPSLTEGADGLLRTAALAQALGDVGVDAPLWVATRGAVSTGRADGPVDPWQARVWGLGRVAALELAERWGGLVDLPETVDDRALSRLVGVLAGGAGEDQVAVRASGVFGRRLTRAAETAATTERGRDWRPGAGSVLVTGGTGALGGHVARWLIDKGAEHVVLTSRRGLDAPGAAELRDELAASGARVTVAACDAADREALAALVAGLPAELPLTAVVHAAGVLDDGVLESLTPERFASVLRAKADAAANLHELTRDLDLTAFVLFSSFAGSIGAAGQANYAAANAFLDALAERRRADGLPATSVAWGPWAEGGMAADDALEQRMRRAGVPPMAADLAIAALQRALDLDETAVTVADIDWERLAPGFTASRPSPLLLELPEVRTALEAEGLRTATNGGGADESSLVQRLAGVPATERERMLLDLVRSAVADVLGHSDAEAVEADRAFRDLGFDSLTAVELRNRLNTVTGLRLPPTLVYDYPSSSALAAHLRTEILGDESAGTGAEAAAGVPSTTAAVADDPIAIVGMSCRFPGGVRSPEELWRLLVSGQDAVTGFPADRGWDLEALYDPDSATDNTTYVREGGFLADVGDFDAAFFGISPREALAMDPQQRMLLETSWEAFERAGIDPTTLRGQQVGVFTGTNGQDYMSLVLHSPDGGDGFMGTGNAASVMSGRVSYALGLEGPAVTVDTACSSSLVALHWAIQALRAGECSLALAGGVTVMSTPGSFVDFSRQRGLAADGRIKAFAAGADGTGWGEGVGMLLVERLSDARRHGHEVLAVVRGSAINQDGASNGLTAPNGPSQQRVIRQALAGAGLSPSEVDALEAHGTGTTLGDPIEAQALLATYGQDRPEGRPLWLGSIKSNIGHTQAAAGVAGVMKMVLALRHGVLPPTLHVDEPTPHVDWSAGELELLTEAREWPETGRPRRAAVSAFGISGTNAHTLLEQAPEPEESPATAPAVELPTVPWVLSGKSPAAVRGQAERLLAHLGGGTAPAATDVAYSLATTRAALDHRAVLTADSGDGLLAGLAALARGESEVPGLVEGSVSSGKVAFLFTGQGSQRLGMGRELYDAFPAFADALDEVCAHLDAHLERPLRDVLFGEDAEALDRTGFTQPALFAVEVALFRLVEAWGLKADFLSGHSIGELAAAHVAGVLSLADAAKLVAARGRLMQELPAGGAMIAVQASEDEVAPLLTERVSIAALNGPTSVVVAGDEDEAVAIATSFEAQGRKTKRLTVSHAFHSPRMDGMLEAFREVAEGLTYDAPLIPIVSNLTGEVVSAEEITTADFWVRHVREAVRFLDGVRTLEARGVTTFVELGPDGVLTAMAQDCLAEPEAAELLPALRKGRPEAEALTGALARLYVRGPAPDWAAFFAGTGARKVALPTYAFQRSRYWVDAQLSLDEVASAGLGSADHPLLGAAVELPDADAYVFSGRLSLASHTWLADHTVADTAVLPGSAFVELAVRAGDHVGCALLEELTLDEPLILPERGGVRLRVSVSEPDGDGRRPLAVYSRDERSDTDRPWTRHAAGVLGSAEAPAGGGAEPLAVWPPADAEAVDTDELYASMARAGLLHGPAFQSLGRVWRRGEEVFAEVRIAPERQPEAARFALHPALLDGALQPLALGADGAAVARSWRGVKLYAVGAEALRVRLALTEDGAVSMLAADETGALVASVDALVTGALEVDRIAGATASDRHESLFRIDWAPVAAPSEAASAGIAVIGGDELKLSVALETAGFRATVHDDLGSLNAAIEAGGPVPDTVLVPFPPEPGAAEGGLAAGAHTATHRVLGLLQEWLNGGRPGAARLVVVTRGAVAAAGDPAVTDLVNAPVWGLLRSAQTENPDQFVLLDVDGEVSYPAIAAALGSGEPELALRAGAAYAPRLARVEAAPVITKAIDTPEAAKAIDATGSAGQAIDPDGTVLITGATGGLGRLFARHLATAYGARHLLLTSRSGPAADGMAELVAELAELGARATVVACDAADREALAGLLAGIPADRPLTAVVHTAGVLDDGVIDMLTPERVDTVLRPKVDAAVNLHELTRDLDLSAFVLFSAAAGTLGGAGQGGYAAANVFLDALAGHRRATGRTAQSLVWGMWAEERGMGGRLGEADQQRAARGGVLPLAAEEGLALFDAAHAVADEPVLVPVRLEMATLRAAAATGGLLPLYRGLVRTPVRRAATGGPAAPEAVAEAGEGTLAQRLAGQSEAQQQRTLLDLVRRQVAGVLGYASKDQVGAEQAFKELGFDSLTAVELRNRLNAATGLKLTATLVYDYPTPVALARHLRQEVAPEADGPGVSVLEELERLENSLSSLTSEDLESVMEDEAAHANIAVRLQTLLAKWNDVRRTADDAGAEAEAEAFEEVSDDELFDFIDKRFGNG
>NZ_CP029823.1|WP_099013789.1|7120019_7130399_+|type-I-polyketide-synthase
MASANEEKLLDNLKWMTTELRRTRRRLTEVEADAQEPIAITAMSCRFPGGVGSPEDLWQLVAEGGDAISGFPADRGWDIEGLADPDPDRKGTFYNSGGGFLDGVAEFDPGFFGISPREALAMDPQQRLLLETSWEAFERAGIDPTSVKGSRTGVYVGAAAMGYGSDVQGAPQELEGLLLTGGATSVLSGRIAYTFGLEGPAATIDTACSSSLVALHWATQALRQRECSLALVGGVTVMPNPDVFVEFSRQRGLAPDGRCKSFAASADGTGWSEGVGVLLVERLSDARKNGHPVLAVVRGSAVNQDGASNGLTAPNGPSQRRVIRQALENARLSAAEIDVVEAHGTGTTLGDPIEAQALLATYGQERPEGRPLWLGSLKSNLGHAQAAAGVAGIIKMVMAIRHGVLPKTLHVDQPSPTVDWTAGEVSLLTEARPWDETGRPRRAGVSAFGVSGTNAHTILEQAPAPEDFPAPDGDTTPAANAAKVTAAVLPWTLSARNAAALRDNARRLASHLDREPALSTADVGHSLATGRAALERRAVIVGEDRAGLTAALEALARGESAPGLVEGTVAEGETAFLFTGQGSQRLGMGRELYDAYPVFAEALDAVCAELDAHLERPLRDVLFGEDAEALDRTGFTQPALFAVEVALFRLVEAWGLKADYLSGHSIGELAAAHVAGVLSLADAAKLVAARGRLMQELPAGGAMIAVQAAEDEVLPLLTERVSIAALNGPTSVVIAGDEDAALEIAAGFEARGRKTKRLTVSHAFHSPRMDGMLDAFREVARGLSYEAPKIPIVSNLTGGVVSAEEITSPDFWVRHVREAVRFLDGVRTLEAKGVTTFIELGPDGVLTAMAQECVTGEDAGFIAALRKDRPEAEALTTAVARAHVRGVAVDWAAYFAGTGANRVDLPTYAFQHERFWLEPGAASVGDVASVGLELAGHPLLGATVPLAESDGLVFTGRLGLDTHPWLADHVVRDAVVLPGTAFVELAVRAGDQVGCDLLDELTLHAPLVLPAHGGIRLQLTVGAPDGAGRRSLTVLSRAEDAPAEEPWTRHADGVLASGAPRPSFALTAWPPQGAEAARTEELYAALADGGLRYGPVFRGLTAAWRRGDELFAEVRLDESIASEAQAYGLHPALLDSALHALGLGDGDDQGRLPFAWSGVALYASGASALRVRLVLRGADGVRLEIADSAGAPVAAVDSLVLRAVSAEQVRAARAAYHESLFRVEWIELPAGVGAGASGGGRWAVLGTDAFGLGATAYADLAELGEAVDSGMALPEYVVVCPALERPGAAIQARPALEDRGPGRSPGGVQGAEPLHAAEPHIDAAGRGRVGESPSLATTAHQATTQVLGLLHQWLADERFATSRLVFMTLGEGEPVRDPAQSAVWGLLRTAQAENPDRFVLLDIDGQDTSLAALPAALAAGEEQLAVRAGVVRIPRLARVPVAEEAGMAADFGAAGTVLVTGASGSLGGLVARHLVAERGVRHLLLVSRRGERAPGAVELAAELTELGAEVAWAACDVADRGALAATLATVPAEHPLTAVVHTAGVLDDGVIGSLTPERVDHVMRPKVDAAWNLHELTRDLDLTAFVLFSSASGVFGTPGQGNYAAANAFLDALAAHRRAEGRPAVSLAWGPWAGAGMAGGLDEADISRMRRAGLPPLSPAEGLALLDTALTTDEVAPVPMRVDAVALRAQAAAGALAPLLRGLVRVPVRRAVDAAAGGGSALAERLAGLSEAERDRLLLDLVRTQVAAVLGYAGPQAVEEGRAFKDLGFDSLTAVELRNLLREATGLRLPPTLVFDYPTSTALAGHLREEIVGDTAAAIVPDRVLSAVDREDPIAIVAMSCRFPGGVRSPEELWQLLLAGEDAITPFPADRGWDLATLYSDDPDREGTSYTREGGFLHDVADFDASFFGISPREALAMDPQQRLLMETSWEAFERAGIDPATLRGTSTGVYIGSNDRDYLTLWLNEPQGLEGHLGTGNSSSVASGRLSYAFGLEGPAVTIDTACSSSVVALHLAAQALRGGECSLALAGGVSVMSTPGAFLEFSRQRGLAADGRIKAFSGDADGTNWAEGAGVFLVERLSDARRNGHPVLAVLRSTAINQDGASNGLTAPNGPSQQRVIRQALANAGLSPADIDVVEAHGTGTALGDPIEAQALLATYGQDRPEGRPLWLGSAKSNIGHTQAAAGAAAIMKMVMAMRHGVLPRTLHVSEPTPHVDWSAGDIELLTEARPWPETGRPRRAGVSSFGFSGTNSHAIIEQAPAANAVSAPAPERSLPVLAWPVSARTEDALRAQAARLRPSVDADAGAGTPRPLDLAYSLATSRAALEHRAVLLGRDGDLLGEQLAALAEGRGATGLVEGSVAGGKLAFLFTGQGSQRLGMGRELYDAYPVFAEALDAVCAELDAHVERPLREVLFGEDAEALDRTGFTQPALFAVEVALFRLVEAWGLKADFLSGHSIGELAAAHVAGVLSLADACTLVAARGRLMQELPAGGAMIAVQASEDEVAPLLTERVSIAALNGPNSVVIAGDEDEALAIAAGFEAQGRKTKRLTVSHAFHSPRMDGMLEAFREVAEGLTYEAPRIPIVSNLTGTVVRAEEITTPDFWVRHVREAVRFLDGVRTLEAQGVTTYVELGPDGVLTAMAQECVTDADAAGFAAALRKDRAEAETVTAALAQAYVRGAEVNWAGYFAGTGAHRVDLPTYAFQRRRYWPDALETGARAEGAVDTVDARFWEAVESEDWESLATELRVEGDQPLSAVLPALSSWRRAQRERSAADGHLYNVVWKPRPQGPSGSPAPSGTWLTVVPASHADDPRIAAVADDLTRRGARVVRVELDAADTDPATVADRLAAATADGPVAGVLSLLALDERPHPEHPAVPVGLALTGALAEALARRGDDAPARLWCATRGAVSTGGADRLDSATQAQVWGYGRVVALEQPERWGGLIDLPETVDERALDRLAAVLAGSGDEDQVAIRATGVFVRRLAPAPRTAATSAAEPWTPRGTVLVTGGTGALGRHVARWLARNGAERVVLLSRRGPDAPGAAEIVAELSGTDTAVSVEACDVADRDALAVLVEKLAVGGTPVRAVVHSAGISQEPGTGTELPEFARIVAAKTTGAVHLDALFGEDADPLDAFVLFSSIAGVWGSGGQGAYAAGNAFLDALAEQRRARGLTATSVAWGPWAEGGMAAEGDAEEQLRRRGLPPMAPELNMVAFQRVLSREETAVTVADVDWERFAPAFTAARPRPLIDDVPQVATVLRGGDEGESADTAAKDGASALRERLAGLSGADREDAVLEVVRSHVASALGHASADEVEARRAFNELGFDSLTAVELRTRLGAATGLKLPASLVYDYPTPAALAEHLLTELIPDGPGHGPGHGHGYTPAYADTDPQDAELRRTLATIPMSRIREAGLLDTLLRLADPQATTSDPSRVEDDAESIDEMDVQHLIDMALDLDSLDGNES
>NZ_CP029823.1|WP_099013790.1|7095348_7119972_+|type-I-polyketide-synthase
MVSESVDFTPEHTEMGDASPRGASPWRDRLAALPEAERAEALTAWVGEIVEQALKDKAPDVLDPERPFLDLGFDSLATVDLHARLTAATGLRLPVTLAFDHPTPADLARHVRTELLGGNDDSDVSPADAGMGPIAADEPIAIVGMSCRFPGAVGSPEELWEIVAGGKDVISEFPGTRGWDLAGLYDPDPDRPGSSYTREGGFLHDADEFDPAFFGISPREALAMDPQQRLLMETSWEVFERAGIDPAILRGGRTGVFVGAETQDYGPRLHEAEQGFEGYLVTGNAASVASGRIAYTFGFEGPTVTVDTACSSSLVALHLAVQALRSGECTMALAGGAAVMANPGSFIAFSRQRGLAADGRCKPFAAAADGTAWGEGVGMLLVERLSDAQRNGHRILAVVRGTAINQDGASNGLTAPSGPAQQRVIRQALANAGLTAGEVDAVEAHGTGTTLGDPIEAQALLATYGQNREADRPLWLGSLKSNIGHTQSAAGVGGIIKMVMAMRHGVLPRSLHIDEPTPHVDWTGGDVELLTEARPWPESDRPRRAGVSSFGMSGTNAHAIIEQPPAPAEERADAEDPDDEAAAAPALLPWTLSAKTTDALRGQAERLYALLEADPGLALTDIGHSLATTRATFEQRAVLLAGDRDGFRSALRTLADGGDAPSVVRGAPAAGKLALLFTGQGSQRLGMGRELYGAYPVFAEALDDACWYLEEQLERPLLDVLFAEEGTPEADLLDRTDYTQPALFAVEVALYRLLESWGLRPELLAGHSIGELAAAHVAGVLSLEDAAALVAARGRLMQELPAGGAMIAVQASEDEVAPLLTERVSIAALNGPTSVVIAGDEGVALEIAASFEAQGRKTKRLTVSHAFHSPLMDGMLAEFRRVAQVLDYAPPRIPVVSTVTGRVATAEELCSPEYWVRHVREAVRFLDGVRTLADKGATTFLELGPDAVLTAMAQDCLPDAEGTAYAPALRGGRPEDETLTAALALAYVRGKKADWAAPYAATNARPIDLPTYAFQRQRYWLNAPAPAGSAAEAAPGSAVDGRFWDVVERGDVAALAAELAVDPGVSLGEVLPALSLWRRQESVRSAVDGWRYRVLWRPVTDRLSAAGVLGGSWVVVVPSGEAGGVWAGGVVRLLAGRGVDVRVVESDAVDRAGLADELRTAVVGGSVAGVFSLLAVGGESGLLRTAALTQALGDVGVGAPLWVATRGAVSVGRSDGVVDPGQASVWGLGRVAALELPERWGGLVDLPETADERALGRLAGVLAGASGEDQVAVRASGVFGRRLVRAATPGSATGAASDGSWTPGAGSVLVTGGTGALGAQLARWLVECGAEHLVLTSRRGLEAPGAVELRDELAASGARVTVAACDVADRDALAELLGGIPAELPLTAVVHAAGVLDDGVLDSLTPERFASVLRAKADAARHLDELTRDLDLSAFVLFSSITGSVGAAGQGNYAAANAYLDALAELRRAEGLPATSIAWGPWAEGGMAGDDAMERRMRREGMPPMVPESALAALRQALELDDTAVTVADIDWEHYTGTLTAVRPSPLIAELAAEAGQRAATGADTAKVVTDADAATPLGERLSGLPKAEQDRALLELVRAQVASVLGHGGTDAVEAGRAFKELGFDSLAAIELRNRLNAATGLRLSATLIYDYPNATALADHLRTELLGADVAVDGGVVAPSAVAVADDPIAIVAMSCRFPGGVRSPEELWELLTAGGDAVAEFPSDRGWDLAGLYDPDPDRQGTTYTREGGFLYDAGDFDASFFGISPREALAMDPQQRLLLETSWEAFERAGIDPATLRGSRTGVFAGTNGQDYAGLVATPPEGLEGHLGTGNAASVVSGRLSYTFGLEGPAVTVDTACSSSLVALHMAVQSLRSGECTMALAGGVTVMSTPDAFVDFSRQRGLAEDGRIKAFAAGADGTGWGEGVGMLLVERLSDAEKNGHPVLAVVRGSAINQDGASNGLTAPNGPSQQRVIRQALAGAGLSAGDVDAVEAHGTGTTLGDPIEAQALLATYGRERDADQPLWLGSIKSNIGHTQAAAGVAGIIKMVLAMRHGVLPRTLHVDEPSPHVDWSTGAVSLLTEQVEWPETGRPRRVGVSSFGLSGTNAHTIIEQAPALPAASAEEPEPREPAVLPWLLSAKDGQALHAQAAQLATHLRTHPELSATDIAFSLATSRAALERRAALVTTDREAFLAGLDALARGESVPDVVEGTAAEGKVAFLFTGQGSQRLGMGRELYDAYPVFADALDEVCAHLDLYLERPLRDVLFGEDAAVLDQTAFTQPALFAVEVALFRLVEAWGLTPDFLSGHSIGELAAAHVAGVLSLADAAKLVAARGRLMQELPAGGAMVAVQASEDEVAPLLTERVSIAALNGPTAVVIAGDEDVALEIAASFEAQGRKTKRLTVSHAFHSPRMDGMLDAFREVAEGLTYEAPRIPIVSNLTGGVVSAEELTSPEFWVRHVREAVRFLDGVRTLEAQGVTTFVELGPDGVLSAMAQECVTGDGAAFAAALRKGRAEAESVTAALALPHVRGQAPDWREYFEGTGARRVELPTYAFQRTRYWWEEAPAAETALGGAVDGRFWDVVERGDVAALAAELAVDPGVSLGEVLPALSLWRRQESVRSAVDGWRYRVLWRPVTDRLSAGVLGGSWVVVVPSGEAGGVWAGGVVRLLAGRGVDVRVVESDAVDRAGLADELRTAVAGGSVAGVFSLLAVGGESGVLRTAALAQALGDVGVGARLWVATRGAVSVGRSDGVVDPGQASVWGLGRVAALELPERWGGLVDLPESVDERVLGRLAGVLAGAGGEDQVAVRASGVFGRRLTEASGARTSGDEDWRASGSVLVTGGTGALGAQLARWLVECGAEHLVLTSRRGLDAPGAVELRDELAASGARVTVAACDVADRDALAELLASIPAEFPLTAVVHAAGVLDDGLVDTLDAERLERVVRAKATSARNLHELTRDLDLTAFVLFSSFAGSVGAAGQGNYAAANAYLDALAELRRAEGLPATSIAWGPWAEGGMAADEALERRMRRDGVPPMAPESALAALRQALELDDTAVTVADIDWDRFLAEFTAARPSALFGEVRAARPAPAVEGVPRPAATGGTGTLAERLSGLTENERAQTLLELVRAQVASVLGHGGADAVGAGRAFKELGFDSLTAVELRNRLNAATGLRLPATLIYDYPNATALADHLRTELLGADAAVTGGVAAPTVAVADDPIAIVAMSCRFPGGVRSPEELWELLTAGGDAVAEFPSDRGWDLAGLYDPDPDRQGTTYTREGGFLYDVADFDASFFGISPREALAMDPQQRLLLETSWEAFERAGIDPDALRGQQVGVFAGTNGQDYLSLLMQAPEGLEGHLGTGNAASVVSGRLSYTFGLEGPAVTVDTACSSSLVALHLAVQALRQGECTMALAGGVTVMSTPENFIDFSRQRGLAADGRIKAFAAGADGTGWGEGVGMLLVERLSDARRNGHPVLALVRGSAINQDGASNGLTAPNGPSQQRVIRQALTSAGLTTGDVDVVEAHGTGTTLGDPIEAQALLATYGRERDADQPLWLGSIKSNIGHTQAAAGVAGIIKMVLAMRHGVLPRTLHVDAPSPHVDWSTGAVSLLTEQVEWPETGRPRRAGISSFGISGTNAHTIVEQAPAVDTPAEAPERNGLGGLLPFVLSAKNAEALREQAARLRTHIAARPESAPLDIAHALATGRAALERRAVLTVGDRDELLRSLDALARGESVPSVVEGTVAEGKVAFLFTGQGSQRLGMGRELYDAYPVFADALDEVCAHLDLYLERPLRDVLFGEDTEALDRTGFTQPALFAVEVALFRLVEAWGLKADFLSGHSIGELAAAHVAGVLSLADAAKLVAARGRLMQELPAGGAMVAVQASEDEVSPLLTERVSIAALNGPNSVVIAGDEDDAVAIAAGFEAQGRKTKRLTVSHAFHSPRMDGMLEAFREVAEGLTYEAPRIPIVSNLTGAVVSAEEIATADFWVRHVREAVRFLDGVRTLEAQGVTTYLELGPDGVLSAMAQECVTGEDTAFAAALRKDRPEAEALMTALARAHVRGVTPDWAAVFAGTGAAPVDPADLPTYAFQRQRYWPSAAALAAGDPESIGLGDIDHPLLGAAVALADADGLLLTGVLSLRTHPWLADHAVMDTVLLPGTAFVELAGAAGAQVGCERLDELTLEAPLVLPEHTGVRVQLVVDGPDESGRRSFSLHSRRQDALGTEPWTRHATGVLAPGTRISGEPDELAVWPPRGATPIPVEGLYEELAGAGLGYGPVFQGLKGAWRLGENLYAEVGFPEDAPLTSGAEAERFGLHPALLDAALHIIGLDSADREAALAEGALLPFAWNGVQLHAAGAGALRVRLSERSANAVSLLVADGTGRAVATVESVALRAASADQVRAARGGLHESLFRLDWTAVPAPATGAATGDWAVLGADGAQLAVLEGAFGTGIRLAAYRDLAVLRTAVEAGAPAPDTVLLAGIGGGGDASAVHEATQAVLSLLQEWLADERFTASRLVLLTRGAVATEPGADVADLPYAAVRGLFRSAQSENPGRLVLLDVDAQEDSYRTVPAALGVDEAELALRAGVALAPRLARVPLTESTGGTENTRGTENTGGTEAIDGAGNTDGTESLDGAENTHRTENTDAVGTRAESGAPSYDPNGTVLITGATGNLGGLFARHLVSAHGVRRLLLVSRRGAEADGAEELGAELTAAGATVTWAACDVADRDALAATLAAIPAEHPLTAVVHTAGVLDDGILGSLTPERVTHVMRPKVDAALNLHELTRDQELSAFVLFSGAAAVFGAPGQASYAAANSFLEALAQHRVAQGLPATALAWGLWAGAGMGSGLDEVDLRRIARGGVAPIAADEGLALFDAARADGAPVLFPMRLDHAGLRTEATATGTVPALFRGLVRTPVRRAAAVAATADGSSLAQRLAGLARSEQDRELLELVCGRVAAVLGYAGPEAVEAGRAFKELGFDSLTAVELRNDLKTVTGLRLPATLVFDYPTPSALAGHLREELLGAEEEVAAPLVPVRAGATPAVDDDPIVIVGMSCRYPGGVRTPEELWELVATGGDGISGFPVDRGWDLDGLYHPDPDHTGTSYTREGGFLHDAADFDPDFFGISPREALAMDPQQRLLLETSWEAFERAGIDPSTVRGSRTGVFAGVMYHDYVTGLDGIPDGVEGYIGTGNAGSIASGRVAYTFGLEGPAVTVDTACSSSLVALHWAIQALRAGECTMALAGGVAVMATPETFIDFSRQRGLATDGRCKSFAASADGTGWGEGAGMLLVERLSDARKNGHPVLAVVRGSAINQDGASNGLTAPNGPSQQRVIRQALAAAGLSAGEVDVVEAHGTGTTLGDPIEAQALLATYGRERDADQPLWLGSIKSNIGHTQAAAGVAGIIKMVLAMRHGVLPQTLHVDEPSPNVEWEDGAVSLLTERMEWPDTGRPRRAGVSSFGISGTNAHTIIEQPPAAEDHDGAVARPSAVPPVLPWPLSAVGQDALRDQARRLRDRLRSADEDTDLAAIGYTLAAGRAAFEDRAVLVADGREGFLRTLEALASGEPANGLVQGSPVAGKLAFLFTGQGSQRLGMGRELYDAYPVFAEALDAVCDELDVHLERPLKTVVFADDSAALDRTGFTQPALFAVEVALFRLVEAWGLRPDFLSGHSIGELAAAHVAGVLSLADAAKLVAARGRLMQALPAGGAMVAVQASEDEVAPLLTERVSIAALNGPTSVVIAGDEDAALEIAASFEARGRKTKQLAVSHAFHSPRMDGMLDAFREVAQGLSYEAPRIPIVSNLTGTIVSPDEIATPDFWVRHVREAVRFLDGVRALEAQGVTTYLELGPDGVLSALAQECVTGGDAAFAAALRKDRPEAETVTTALAALHVRGVALDWEAFYGGTAVRRVELPTYAFQRRRYWLDVRSAATATPGATAQDAVDARFWEAVEREDLASLAETLNLGTESNGALEALLPSLSSWRRQQSERSTVDGWRYRVSWKPVTDRATASPSGGWLVVVPAEAAEDAWVEGAVRMLNDRGADVHRVELPAGDDRAALAERLAAAIGDKAVTGGVLSLLALADGDGEGLPRTAALTQALGDMGVGAPLWVATRGAVAVGRSDGMVSPAQARLWGLGRVAALEVPERWGGLVDLPAAADERALGRLAEVLAGAGGEDQVAVRASGVFGRRLVRASGPGSDGGSWTPGAGTTLVTGGTGALGAQVARWLVANGAGHVLLTSRRGLDAPGAVELRDELAASGARVTVAACDVADRDALARLLDAIPAELPLTGVVHTAGVLDDGVLDSLTPERFTAVLRAKAVAAAHLDELTRDRELSAFVLFSSTSGTFGAPGQGNYAAANAYVDALAERRRAEGLPATSIAWGPWAEGGMATDGALEQRLRRGGLPPMDAELAIGALQRALDLDDTVVTVADIDWDRFAPDFTAARPSRLLADLPEIRAAAEDTAAEPAADGSSLAARLAGLGEAERDRLLLDLVRTQVAAVLGHDGSESIGADRAFGELGFDSLTAVELRNRLGAASGVQLPATLVFDYPTASALAGYLRGELIGTDTGASADTAAESTRSTAVTTAADDDPIAIVAMSCRFPGGVRSPEELWQLLTAGGDAIAEFPADRGWDLDALYDPDPDHRGTFYAREGGFLYDAGHFDAGFFGISPREALAMDPQQRLLLETSWEAFERAGIDPATLRGTSAGVFVGSNGQDYDASLHTVPEGVEGYLGTGNAASVVSGRLAYTFGLEGPAVTVDTACSSSLVALHWAIQALRQGECSLALAGGVTVMSSPGAYIEFSRQRGLAADGRCKAFAAGADGTGWGEGVGMLLVERLSDARENGHPVLAIVRGSAINQDGASNGLTAPNGPAQQRVIRQALAGAGLTTGDVDAVEAHGTGTRLGDPIEAQALLATYGRDRDAERPLWLGAIKSNIGHTQAASGVAGVIKMVLAMRHGVLPRTLHVDEPSPHVDWSTGAVSLLTEQVEWPETGRPRRAGVSSFGFSGTNAHTVLEQAPAHDEPAESTPRRPLMRPDVVAWPLSAKGEDALRAQAERLRAHVEAEAGLDAVDVAYSLATTRSALEHRAVVLGPDRDRLLAGLTALARGESAAQLIRGVPAEGRTAVLFTGQGSQRLGMGRELYEASPVFAEALDAVCAELDRHLERPLYDVLFGDDKAPLDRTGFTQPALFAVEVALFRLAEAAGLRPDLLAGHSIGELAAAHVAGVLSLEDAAALVAARGRLMQELPAGGAMIAVQAAEDEVEPLLTDRVGIAALNGPTSVVIAGDEDAALEVAASFEARGRKTKRLAVSHAFHSPLMDGMLAEFRKVAEGLRYGAPRIPIVSTVTGQPVTDELGMAADYWVRHVRHAVRFLDGVRTLEAQGVTTYVELGPDGVLSAMAQDCVTAGAEGAEEVAFVPVLRAGRPEPETLTGALATLHVRGAALDWAALFAGTGAHRVDLPTYAFQRRRYWLEGTPRHTSGEEAAAVDTAGARFWEAVESDDLASLSDAVGIDVDQPLSALLPALSAWRRREREQSALDGRRYRVTWKPLEEPRLAAAPGVWLVAEPAAAAGHAEAVRRVLDALADRGADIRRLTPADGTADGADLDRDALADRIRRAAAEEPVHGVLSLLALDERAHPDHPAVPTGLLRTGVLVQALGDAGLDAPLWCATTGAVSTAASEPVGSAAQAQIWGLGRVVALEHPERWGGLLDLPATLDERAADRLAGVLGGHGDGHEDQLAIRTAGILARRIAHAESTPATGAPWRPRGTVLVTGGTGALGAHVARWLVDNGAEQVVLTSRRGPDAPGADQLTAELTEKGAQVTVVTCDVTDRDAVAGLLTRIRDAHPHHPLTAVVHTAGAGQFAPLAETTPADVADVVAAKVAGAAHLDALLGDTELDAFVLFSSIAGVWGSGGQGAYAAGNAFLDALAEQRRARGLTATSVAWGPWADGGLVADDEAAEQLRRRGLPVMAPHSAIAALQQALDRNETAVAVADVDWGRFAPAFTAARPRPLIADLPEVRAALAPDPAEGADGGTAEAPAESLRQRLAGLTGPEAERALLDLVRTEVAAVLGHDDTTAVQAGRAFKELGFDSLTAVELRNRLNAATGLQLTATLVFDHPTPGVLAGVLRADLLGEDTTPELPALAEIDKLEFALSHVSDDATERERVTARLEALLRTWNETGNAAGADGADDDELDLDAASAEDIFDIINNEFGRS
>NZ_CP029823.1|WP_069864140.1|7093504_7095049_+|PH-domain-containing-protein
MRSETTVRPSSHAAGDWGRLNGRLLLVNLSILAAPVAMFLATLAISGGKTNLQVIITLGSLFVTFLVISGIGLMRLFTTRYRLTEERFELHTGLLFRSERSIQIGRIRGVDLTANPVHRIFGLTTLRIDSGDQSDAAARRLALDGITKAEALELRSRIIALRDAGQSRPVADSDGVLSRLDWSWLRYGPLTVWGVGGVFIAVASTYRTLSELQVDPLELGVIKDLENRFGTIPLWYGILLAAVVIVVLGMIGSTATFIENWAGYELRREDGGILRIRRGLLATRSVSIEERHLRGLELVEPVPLRWAKGAKLNAVASGLGNQEDNRRRRGMTPPTPRGEALRVAAEALPVGPGLIERKGLLPHPKAALRRRINRALIWSVLIAAVPVGLGLWLGSWLVVTGVITGVVLVPVLVAFAMGAYRSLGHGLRGRFLVACSGAFARRTVALERDGIIGWKLSRTPFQRRVGLITLGATTAAGEGVYHVHDLTEGQGIALAETAVPGLLAPFIERAPDRG
>NZ_CP029823.1|WP_079257701.1|7092998_7093508_+|PH-domain-containing-protein
MEAVERHDNLRLRPPRHRVDRRAIGWWTVQSAVFALPLPLVFGILWASIPPTREFFMWATLISLVPGLLYMAVMPAWRYRVHRWEATDEAVYAASGWLWQQWRVVPLSRVQTVDTLRGPIQQMFGLSGITVTTASAAGAVKIKGIDHKLAGDLVEYLAKCTQAVPGDAT
>NZ_CP029823.1|WP_069864134.1|7092362_7092929_+|hypothetical-protein
MPQMSQFMSALIASGTILIIILATDIGRRRITTMRMVRSVIAVAIVIAIFVESFPTKGNDLSLQLVGVGTGVICGLIAGVLLPAYKDATSGELYTIGGIGYALVWIVLSGGRILFAYGAEHWFTMDLIKFSIDYKISGQDTYANAFVFMSLAMVLTRTAVLLAKMRKLKGQDAGSGQLPQQTATGASV
>NZ_CP029823.1|WP_079152983.1|7090950_7092195_-|sensor-histidine-kinase
MRNHSPGEGSQTGAYYGPESGTRWFGLWDGFFAVSYLVTAILLFLSSGSQVSHSIPIAALTLTVPWYAAVGRTLMIEDTYGPRNLVFAAGLVALFCVTTAFNLIGAFALFAVIPMLIMSLPMGWAVVLATVANLCPVLVVAFIGEDLGLSVLGVLPISLLSIALSVLLGLWIKRVVRQSKGRGQLIEELRRSRERVARLSHEAGISAERERLAREIHDTLAQGLTSIISLVQAAESEVREAPDQAVHHLSLAGRVAKESLAEARDFVAALTPPALRGGSLSQAVRRQAEGLIAETGLEVRCSVMGEEKSLPMAVSVVLLRTVQEAIANVRKHAKQARTVDVIVVFDQGGVRLLVRDDGEGFTPDGTQEGYGLRGMQARVAEIDGVASVTSSPGRGTTVEVSVPMTALTGEAVSG
>NZ_CP029823.1|WP_079152982.1|7090298_7090958_-|response-regulator-transcription-factor
MAEGTPGGPSGPGSPIRVLLADDHPVVREGLSAMLDSAEGITVVGQAGSGEEAVVQAVALRPDITLLDLRMGGMDGVEATGQILRQVPGCKVVIVTTYEDDSDILRAVEAGAAGYLLKGSSRQELIDAVQTAARGETVLTPSLAGKLFRSRAPEPSPLSGREREVLRLVGRGLTNAEIGAELFVSEATIKTHLLRSYRKLGVSDRTAAVLKAMEHGLLT
>NZ_CP029823.1|WP_099013784.1|7199455_7209076_+|type-I-polyketide-synthase
MVNNEDKLRDYLKRATADLRQARRQLREVEERHQEPIAIVAMSCRYPGGVTTPEELWRLVLDGQDAISGFPTDRGWDVESLYDADPDQAGASYVDEGGFLYDAGGFDPAVFGISPREAMAMDPQQRLLLEASWEAFERAGIDPTGLRGHRTGVFAGVMYHDYTSRLDSVPEGVEGFLGTGSSGSIASGRVSYTFGLEGPAVTVDTACSSSLVTLHMAVQALRNGECSLALAGGVTVMATPSTFTEFSRQRGLAADGRCKPFAAAADGTGWGEGVGMLLVERLSDARKNGHPVLAVVRGSAINQDGASNGLTAPNGPSQQRVIHQALTNGRLSAADVDAVEAHGTGTTLGDPIEAQALLATYGQEHTEDQPLLLGSIKSNIGHTQAAAGVAGIIKMVKAIEHGVLPRTLHIDEPTPHVDWSAGAVSLLAETTPWPETGRPRRAAVSSFGFSGTNAHTILEQAPAEEPAEDATEEPAPAKPLDVVPWALSGKSAAALRAQAERLLAHLEADPSLSPLDVALSLTTTRAQLDHRAVVRGQDRDTLMAGLTALAEGGMAAGVAQGSAVGGRTAFVFPGQGSQWAGMAVGLMDASPVFAAWIEECAGALGEFTDWSLVDVLRGAEGAPSLERVDVVQPVLFAVMVSLAELWRSLGVVPAAVIGHSQGEIAAACVAGALSLRDAARVVALRSQAIGRVLAGKGGMVSVALPVVEVRERIALWGEERISVAAVNGPSSVVVSGEPEALDELIASCEADEVRARRVPVDYASHSAQVELLREELLELLAPVEPKTAEVPFLSTVTGEWVEGPELDAEYWFTNLRRTVELEGAVRRLLDEGFGAFIESSAHPVLTMGVQETAEDAGREAAAIGSLRRDEGGLDRFWASVGEAWTRGVTVDWDGVFDGTGAVRVELPTYAFQHQHYWLESGTPTADATPAADPVEARFWEAVEREDWQSLAAELDVDGDERVSALLPALASWRKQAREQSTVDGWRYRVTWKPLADGQSARLTGVWLVVAPATENTDTWTDAVAGVLAERGADVRRIAVDTGVDGREELTERLRAALAETDGIPFTGVLSLLALDGHPHPRHPSVPAGVAAQLALVQALGDAEIGAPLWSATRGAVSVGRAEPLESPEQALVWGLGRVAALEHGERWGGLVDLPGAPDERALARLVTALAGAEEEDQVAIRATGLLVRRLVRAPLAATPAVRTWEPTGTTLVTGGTGALGAHVARWLAGNGAEHLVLTSRRGLDAPGAADLRSELTELGAKVTIAACDVADRAQVEALLADIPAEHPLTAVVHTAAVLDDGVIEGLTPDQVDRVLKVKVDATRHLHELTRDLDLSAFVLFSSFAATFGAPGQGNYAPGNAFLDAFAEYRRAQGLPATSLAWGPWGEGGMAEGGVGDRMRRHGVIEMAPRSAVTALQHALDRDESVLTVVDMEWKRFVLAFTSGRSRPLLHDLPEARDVIQDMAGDADADGAGAVALTQQLAGVPEAEQERLVLELVRTAVAAVLGYAGADDVEAGRAFKELGFDSLTAVELRNRLSSASGLKLPPTLIFDYPTPTVLARHLRGEIAGERSAAVAALPTAAALADDEPIAIVSMSCRFPGGVRTPEELWQLLVSGGDALSEFPGDRGWDTEALYNPDPDAQGTSYTREGGFLTGAGEFDPTFFGISPREAMAMDPQQRLLLEASWEAFERAGIDPATLHGSPSGVFVGTNGSDYSILMRSNTEGYEGHLATGSAASVVSGRLSYTFGLEGPAVTVDTACSASLVALHLAVQSLRQGECSIALAGGVTVMATPGTFIEFSRQRGLSSDGRSKAFSADADGFSPAEGVGMLLVERLSDARKNGHPVLAIVRGSAINQDGASNGLTAPNGPSQQRVIRQALANARLSAAEVDVVEAHGTGTTLGDPIEAQALLATYGQERPEGQPLLLGSIKSNIGHAQAAAGVAGVMKLVLALRHGVLPESLHIVEPTPHVDWSAGEVELLTEAREWPETGRPRRAAVSSFGFSGTNAHAIIEQAPAEEPDGAEPVTRRPGALPWTVSGKSEAALRAQAGKLLAHLDADPAPRPLDIGHALATTRAAFDRRAVLVGTDRDDFARGLDALARGQVVPNLVQGDSIGGKAAFVFPGQGSQWVGMAVELLDASPVFAARIDECAAALAEFTDWSLVDVLREAEGAPSLERVDVVQPVLFSVMVSLAELWRSLGVRPSAVVGHSQGEIAAACVAGILPLQDAARVVTLRSQAIGRVLAGKGGMVSVALPVAEVRERIEPWGEERISVAAVNGPSSVVVSGEPEALDELVASCEADEVRARRVPVDYASHSAQVELLRDELMELLAPVRPKAAEVPFLSTVTGEWVDGTELDAEYWFTNLRRTVELEGAIRRLLDEGFGMFIESSAHPVLTMGVQETAEDAGREAAAIGSLRRDEGGLDRFWVSLGEAWTRGVNVDWEAVYEGTGAVRVELPTYAFQHQTYWPRAADVPADESGTPSDAVDARFWEAVEREDLESLADTLAFGDDGERSSLGAVLPALASWRKQAREQSTVDGWRYRVTWTSLTERQAPRLSGTWLLAVPESAATDDWTLGAIRMLAERGAEVRQITPTAVESDRASLTRLVREELADAGTVSGVLSLLAFDEGTAPGTDGVNAGLTGTAVLTQALGDAGVDAPLWCATRGAVAVGRTDTVDSPEQALVWGLGRTAALEYPERWGGLVDLPGAPDERALARLAGVLAGTDGEDQLAVRTAGVFARRLVHAPLAGAPAAGAWKPAGTTLVTGGTGALGAHVARWLAANGAEHLVLTSRRGLEAPGAAELRDELTGLGSEVTVAACDVADRKAVETLLATIPADQPLTAVMHAAGVLDDGVLDALTPERFATVLGPKADAARHLHELTRELDLSAFVLFSGIAGTLGDAGQGNYAAANAYLDALAERRRADGLPATSVAWGRWGETGLAADGAIGERLDRGGVPAMAPHAAITALQRALDHADTVVAVADIQWDRFAYGYTAVRPSPLIGELPEVKRLRETGGPAAGEPGAGPDGSPAEALRKRLAGISRAEQSLVVLEVVRSGAAAALGHSSTDEVGAGRAFKELGFDSLIALELRNRLTAATGQKLPATLVFDYPTPTALAEFLCARIVGDGGTAAAPGVAELDALESALSVLDPDSEARETIAARLRDLAAKWAEPRTADAEAAEGDGGTVTEKLQEATPDEVFAFIDKELGI
>NZ_CP029823.1|WP_099013783.1|7209132_7226481_+|type-I-polyketide-synthase
MSDQDKILDYLKRVTADLHQTRQRLREVESQEPEPIAIVGMSCRFPGGVTSPEELWELVAAGGDAIADFPTDRGWDVESLFADDPDEQGTSYTDKGGFLDGAGEFDAAFFGISPRETLGMDPQQRLLLETSWEAFERAGIDPATLRGSKAGVFVGTNGQDYPELMHTLPQGVEQYLLTGNAASVISGRISYTFGLEGPALTVDTACSASLVALHLAIQSLRNGECSLALTGGVTVMNSPRAFINFSRQRGLAPDGRCKAFADGADGTGWGEGVGMLLVERLSDARRHGHNVLAIVRGSAINQDGASNGLTAPNGPSQQRVIRQALTDARLTPAQVDAVEAHGTGTSLGDPIEAQALLATYGQNRPDGRPLWLGSIKSNFGHTQAAAGVAGIIKMVKAIEHGVLPRTLHVDAPSRDVDWDAGAVSLLTENTPWPETGQPRRAGISSFGVSGTNAHTVIEQAPAEDREPRAAGGDATPSRWSGIGGLVPVLVSAQSAPALRAQAERLTARVQGDPDLGLTDLAHSLATTRAALDQRAVVLAGEGGREELLRGLAELAEDAPAGSVVRGEVAEGKLAFLFTGQGSQRAGMGRELYAAVPAFARALDEVCAELDQHLQRPLREVMFGDDSAQLDRTGHTQPALFALEVALFRLLETWGVKPDFLVGHSIGELAAAHVAGVLSLADAAKLVAARGRLMEELPTGGAMIAIQASEDEVAPLLTERVSIAALNGPTSVVIAGDEDAAVAIAESFRARDRKTKRLTVSHAFHSPRMDGMLDAFREVARQVTYGPPVIPIISNLTGGSVSADEICSPDYWVRHVREAVRFTDGIRRLEEYDVATYVELGPDGVLSAMAQDCVTSDGAVFVPVLRGDRPEATALAGALARAHVHGVAVDWAAVFEGSGAHRVELPTYAFQRELFWPEPPGPWTGDVTAAGLGSADHPLLGAAVSLADGAGFLFTGRLSLQTHPWLADHAVMDTVLLPGTAFVELAIRAGDHVGADVLEELTLEAPLVLPPQGGVQLQVSVGAPDETGRRSLTLHSRLEDAADGTWGEGEWTRHATGVLAGGATTPDENLTAWPPAGATEVPVDGLYDWLAETGFAYGPVFQGLQGAWQHGNQVYAEVRLPESARAEAELFGLHPALLDAALHAVGIGSLLEDTEHGRLPFSWSGVRLHAVGAATLRVRLSPAGQDAVAVLVTDESGAPVASVDSLLLRPVSPDQVHAARGAFHEALFRVEWTPAPVPAATTVVAGQWAVLGAEHPELAAALPTAVGYADLAALGAAVDAGAPLPQAVVAPFFADDTGLPVRAAVRDALHRALELTQNWLADARFEGSRLVIATRGAVATSADADTEDLAHAPLWGLLRSAQSENPDRFVLVDIDGDDASYLALAPALATGESQLAVRTGTVVVPRLAKVASADRTAPALDPEGTALVTGATGTLGGLVARHLVAEHGVRRLLLLSRRGADAHGAAELVAELRESGAEVTLTACDVADRDALAGVLAAIPAEHPLTAVVHTAGVLDDGVIGSLTAERVDRVLPPKVDAAWNLHELTRDNPDLSAFVLFSAAAGTLGGPGQANYAAANAFLDALAHRRHAQGLPATALAWGLWAERSGMTGDLDDTDIQRISRAGVAALSSEEGLALLDTALAVGDPTLVPMHLDLAPLRHADATMVPALLRGLVRAPGRRVVETSGGAAPGGLADRLLGLSVPERDRLLLEIVCGQVAAVLGYAGPEAVGAGRAFKELGFDSLTAVELRNRLGAVTGVRLPATLVFDYPTPTSLAGFLRTEILGDQADEAAAAPAATVAVADDEPIAIVGMSCRYPGGVTSPEELWQLVTGSVDAISGFPTDRGWQLEGLLGDDPEQTGTSATIEGGFLYDAGEFDPDFFGINPREALAMDPHQRLLLETSWEAFERAGIDPATVRGSKTGVFAGVMYHDYLSRLTALPDGLEGYLGTGTAGSVASGRVSYTFGLEGPAVTIDTACSSSLVALHLAAQALRNGECTMALAGGVTVMSTPDTFIDFSRQGGLSASGRCKSFSADADGTGWAEGVGMLLVERLSDAKKNGHKVLAVVRGTAVNQDGASNGLTAPNGPSQQRVIRQALANAGLSASEVDAVEAHGTGTTLGDPIEAQALLATYGREKSEDQPLWLGSIKSNFGHTQAAAGVAGIIKMVQAMHHGVLPRSLHLDEPSPHVDWAAGAISLLSEAREWPQTGRPRRAGISSFGVSGTNAHAIIEQAPESEPAEVSALPAARPSVLPWALSGKNADALRAQAERLLADLERRPELSPTDLAYSLATTRAALDHRAVVVGGDRAALVVGLEALARGESAAGLVQGSVADGKVAFLFTGQGSQRPGMGRELYDAYPVFAEALDAVCDELDAYLERPLKTVMFGDDAQELDQTGFTQPALFAIEVALFRLVEAWGLRPDFLSGHSIGELAAAHVAGVLSLADAAKLVAARGRLMQALPAGGAMIAVQAAEDEVLPLLTDRVSIAALNGPTSVVIAGDEDAALEIAAAFEARGRKTKRLTVSHAFHSPRMDEMLEAFREVAQGLSYEAPRIPIVSNLTGNVVSGEEITSPDFWVRHVREAVRFLDGIRTLAAQGVTTYLELGPDGVLSAMGQDCLAESDADVAGFAATLRKDRDEAETVATALAALHVRGVTPDWSAYFAGTGAHRVDLPTYAFQHRRFWLTSPAGFVGDVESAGLDRADHPLLGAAVPLADSDGFLFTGRLSLESHPWLADHAVMGTVLLPGTAFVELAIRAGDQVGCDRLDELTIEAPLVLPERGAVQLQIVVGAPQQAGHRTLELYSRAQDAPAEMPWIRHASGVLVAGAPRPSFDLTAWPPQGAEPAEVEGLYEHLAQGGFAYGPMFQGLTAAWLRGDEVFAEVRLPEDRKADAATFGLHPALLDAALHSTFARAGGDEQGRLPFSWSGVSLHAVGADALRVRLTPAGADGVSLELADGTGAPVASVEQLALRPVSAGQLAEGRSAAYHESLYRLDWATVPLSTESPAVSWTVLGEGAPAPLTSGAEIHADLDALAAAGDAPAYVLAYLDPRGATGDEVTAAVHTATQRALALVRAWLADDRFAASRLVMVTRGAVATAGDAGTHDLPHAPVWGLVRSAQSENPDRLVLVDLDGTDASYEALGAALASGEPQFVLRRGAVHAPRLARTAASGPMVPPPGEPAWRLDIQDKGTLENLTLLPSPEAAAPLETGQVRVAVRAAGVNFRDVLNALGMYPGDAGLMGSEGAGVVLETGPGVTDLAPGDRVMGMLPGGFGPLVVVDRRMIAPMPEGWSFAQAASVPIVFMTAYYALRDLAGLRGGEALLVHAAAGGVGMAAVQLARHWGVDVYATASQGKWGTLRSLGLADDRIASSRDLAFEEKFREASGGRGVDVVLDSLAREFVDASLRLLPRGGRFVEMGKTDVRAPEEVAAAYPGVSYQAFDLTEAGLDRIQEMLCELLELFRQGALRALPITAWDLRQAPDAFRYLSQARHIGKVVLTVPAPWNPDGTVLITGGTGTLGGLVARHAVTERGARRLVLTSRRGEQAAGAAELAAELRELGAEVTIAACDAADRDALAAVLAGIPAGHPLTAVVHTAGVLDDGVIDSLTPERLEKVLRPKVDAAVNLHELTRDQDLAAFVLFSSAAGTFGGPGQANYAAANSFLDALARHRQAQGLAATSLAWGLWAEASGMTGALEATDKSRMNRSGVLGLSSAEGLALFDAAQEVGDAFLVPMQLDLAPLTGAPIEMVPPLLRGLVRGGTTRRTAESGAAGDGSSLVERLVRLDAAERERTLLDLVRAQVAVVLGHDSPDAVEASRAFKDLGFDSLTAVEFRNRLGAAAGLRLPATLVFDYPSPTALAGYLLEELLGSEAAAAVPARAEGPSGSVTDEDDPIAIIAMSCRFPGDVRTPEDLWELLAEGRDGIARLPEDRGWDLEAFYDPDPDRPGTSYAREGGFYYDAHHFDPAFFGINPREALAMDPQQRLLLETSWESFERAGLDPGALRGKQVGVFVGQMHNDYVSRLHTVPEGVEGYLGTGGSSSIASGRVSYTFGFEGPAVTVDTACSSSLVALHLAAQALRGGECTMALAGGVTIITTPDVFTEFSRQRGLARNGRCKPFAAGADGTAWGEGVGMLLVERLSDARKNGHKVLAVVRGTAVNQDGASNGLTAPNGPSQQRVIRQALANAGLSASEVDAVEAHGTGTTLGDPIEAQALLATYGREKSEDQPLWLGSIKSNFGHTQAAAGVAGIIKMVLAMHHGVLPKSLHIDEPSPHVDWESGAVSLLSEAREWPRTGRPRRAGISSFGMSGTNAHTIIEQAPESEPAEAPALPAARPPVLPWVLSAKTPEALRAQGARLRAHVADHPELPLAGIGHSLAASRVPFEHRATLVAADQDGFLAGLDALAEGRSATGLVEGSVAEGGKLAVLFTGQGSQRLGMGRELYDAYPAFAEALDTVCDALDPHLERPLKTVVFGDDAEELDRTGFTQPALFAIEVALFRLVETWGVRPDFLSGHSIGELAAAHVAGVLSLADAAKLVAARGRLMQRLPAGGAMIAVQASEDEVTPRLGKRVSIAAVNGPTSVVVAGDEDAALEVAAAFEAEGRKTKRLTVSHAFHSPHMDGMLDAFREVAQGLSYEAPRIPIVSNLTGAVVSAEEIATADFWVRHVREAVRFLDGVRILEAQGVTAYVELGPDGVLTAMAQDCVTEDGGSFAAALRGGRPEAETLLTAVGTAHVRGAAVDFTALFAPYGPGLVDLPTYAFQRRSFWLDAGPVGGDATAIGLHAAGHPLLGAAVELPDSDGIAFTGRLSLQTQPWLADHAVMGTVLLPGTAFVELALRAGDHAGCDRLDELTLEAPLIVPDQGAVQLRLSLAAPDDTGRRALTLHSRAEGAPADEPWLRHATGALAAGMVESSFDLSAWPPAEAEKIEVEGLYEGLADSGFAYGPVFQGLTAAWRRDDEVFAEVRLPEDRKSDAGAFGLHPALLDAALHALGLSAAEEGNGQGRLPFSWTGVSLHAVGASALRVRLGGTATGTVTLELADTTGAPVASVEGLALRTISPDQLATPRPGTPSDSLFRLDWTPVPAQSTEVTPNRWAAVGPDTLDLPAYADLDALAEAIASGTRHPEYVVADLANQARPVLEDGAIQARPAIEDTPEGRQASVDGAASEARPVAGNPARPALEDRGPGAEPMAGAANQARPAFEDTPEGRQGSWGLPQVSGRGGIGESSSPAETAHQATTHVLDLLQKWLTDDRFTDSRLVLLTSGAVSTGTDAPATDPAQAAIWGLARSAQAENPDRIVLVDTDRKDDPQQTLATALATGEPQLAVRDGAVKAPRLARATVATDQETPALDPEGTVLVTGASGTLGALFARHLVAERGVRHLLLLSRRGETAPGAVELTTELRELGADPRWAACDAADRKTLAETLAAIPTDHPLTAVVHTAGVLDDGVIASLTPERMATVARPKAHAAWNLHELTQDADLSAFILFSSASGVFGGPGQGNYAAANAFLDALAQHRRANGLPATSLAWGLWSVAGGMGGELDEAEIARIRRGGVGVLTAESGLELFDAAQGSDEPLLVPLPLDMAALRAQAGSGMLPALFRGLVRAPARRAAESAAAAAAGAEALRERLAGLSDPERAEVLLELVCTQVAAVLGYPGPETVDPARSFSEVGFDSLTAVELRNRLNATTGVRLPATLVFDYPTPNALVEYLRGEILPDDASAVTSLLAELDGLEKSLAGATPDDEDRSRITARLQALLAQWNDNRGPEDGAGVAEELESATDDDLFDFIGKEFGIS
>NZ_CP029823.1|WP_099013781.1|7238319_7238535_-|hypothetical-protein
MAANRPDRDEHPKMTMRVYTMAHNGIVTARRAIVAVLDGEKGDAYSLGQAWPPCQCPRHRDHNNPDRFKRS
>NZ_CP029823.1|WP_142881432.1|7238534_7238873_-|hypothetical-protein
MEVGDPVIADGRATPVLSPGCALCAAPGDFGPHNPTEPRSGLCPACVAAGKPTRDGLEQAVLIVAGQTLAGAEALDLAGATPEELTYHLGAMKRSLRGLLQLLAPVTGEEGR
>NZ_CP029823.1|WP_099013779.1|7239025_7239880_+|helix-turn-helix-domain-containing-protein
MDGERPLNRKELHPDSSPLAAFGARLRSLREGRGWTQEDLAERTGYSSVHVSAIETARKPPTLRLVRSIDRAFGTEGTADSFEREWREIRHGSLLVGFPEYVGHEGRAAEIRLYEVGVIPGLLQTPEYATALAEGAVKRGAITAEQAQERVAFVAERQAALVRTSPPLVFVVLDESCLRRPVGEPAIMNAQLEQLIEFAGRPNTVLQVAPFDMGTRRPFDLPLYILTMSDRSLMSYAESAQRGHFERDSTSVVPLLTAYHQLQAEAPSQAQSVAMIRQLRKGTP
>NZ_CP029823.1|WP_099013778.1|7239876_7240086_+|DUF397-domain-containing-protein
MTTESPRWFKSSYSNNGGACIEVAANLVASRGVVPVRDSKDPHGPALMFEPTAWSSFVSAVRHGEFPIT
>NZ_CP029823.1|WP_099013777.1|7241362_7241830_-|NUDIX-hydrolase
MTYTPPLWPVSVKGVALDAQDRVVLLKNERDEWELPGGRLEIGSPDGAVPPDASPEAALEREIQEETGWEVKAGPLIDGGVWIYQPIPGRRVLIVTYGCTVLTPDRPPVVSHEHKQLGMFTADEVPELTMPDGYKQAIAAWYGRRDVGLDDYERM
>NZ_CP029823.1|WP_099013776.1|7244162_7244327_+|FxLD-family-lantipeptide
MPKAGTSYAAEATSDFDLNIEVLASAPVVPGLLNDTGDGCTATCQSACSNSTCG
>NZ_CP029823.1|WP_099013775.1|7244396_7247435_+|lantibiotic-dehydratase
MYHAVDAVLIRAAAHSLSAELPPWPDLNGNLADDVDRWRKWIEQVCANETTAAAIEFASPLLAEAVNGILSGHSQRPRTVRRAAVSLVRYLLRMRHRATPFGLFAGPAPVRLGDTAEARWRTNHHVTVRADDAWLTAIVTTLETVPGLLWRLPVMADPTRIVRGTSIVISHQPGKDGPVEVTMRRTPAVETVLRLAQSPITVGDIVAKLSADYPDTPSSVIGDMVGGLVANRVLLTSLRAPMTVDDSLGHLVSQLDAIGADADSETAAALRQIHQLLTQHDTAPTGEQPTIRTEATRRMTSLRSVPDRPLVANLRPDCDVTLPSAVAEEAEHALAVIARISPYPAGYPAWQDYRARFLERYSIGALVPVRDLVDPDIGLGFPAGYRGSVLKRPVVATTRRDEYLLALAQEAAVNSAREIVLTEEDCAALTVAGVARVPAHVEMCFTVLADSLDALQSGRFALSLAGLSLGAGRTTGRFLTMLEQPDQDRMRAAYAAMPTLDADAAVAQISSPPLRLRTQNVSRAPAVAPHLLSLGEHNPTGTLDLDDLAVSADTQRLHLVSLSTGRHIEPTVMNAVELTNATHPLVRFLTEVHRSHAAALTPFAWGAATRLPFLPEIRVGRAILSPACWRLRQRDMGNESRPGWIHRFTDWRCRYGVTRTVHLGADDQRLRLDLDNPIHLQLLRSELARADAVTLHEAPDEDALGWLGHAHEITMPFASVLLPSPSTAGTRAVVRRSSGRIPGTSRWAYLKIYCHADRAREILTTHLPALFQEWGDEPPLWWFTRYSDPGTHVRLRLLLPGPYVFGAAAQRVGPWAATLRNDGLISRIQWDTDEPETGRYGTGCALDAAERYFAADSAAAVAQMALNLPVDLRPAVIAASFADIATVFVGNPVAGRCWLIENLLKADGPAPARDLQAQATRMSAPDTNLAALRTLPGGEAVVTAWVDRRVALKAYRTALIDEGAAPATVLPSLLHMHHNRTAGIDPDGEATCRRLARAAALSWTVRAKGALR
>NZ_CP029823.1|WP_099016938.1|7247437_7248577_+|lanthionine-synthetase-C-family-protein
MTPLALDKATATRQSLAHGLLGTTLLHIERAHRGTGSWQTVHLQLAAVGPLIDGDDANLFLGTPAMAYTLHLASAGSERYAGTLHALDAIVAAHTRRRLRAAHARIDQGKPTSFAEYDLLRGLTGLGALLLRRAPDSKETKGILEYLVRLTEPIPGPDGEALPGWWVWHAPTHLGAPIPGGHANAGLAHGITGPLALLALANRHGMTVKGQEDAMARICHWLDRIRHRDHHGMGWPRWVGKATAMPTSPAAPSWCYGTPGLVRAQQLAAIALGDPDRKRMAERALLSCLADPHQLDQLTNPGLCHGLGGLIRVVQRVAQDAEEPSLFTDRLPQLSARLPSLDLPAEMGFLEGAAGAALASQSAAEANPLSDWEACLLLI

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Crispr_ID: NZ_CP029823_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_11

7721192-7721271

Orphan

Consensus_repeat	Method
GCCCACGGGCCCGCCGCCCGGCGACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP029823_11

>merge|NZ_CP029823|11|7721192-7721271|CRISPRCasFinder
GCCCACGGGCCCGCCGCCCGGCGACGGACCGCCCCACCGACCACCGGCCCGTCAGCCCACGCGCCCGCCGCCCGGCGACG

>NZ_CP029823|11|9|7721192-7721271|CRISPRCasFinder
GCCCACGGGCCCGCCGCCCGGCGACG	GACCGCCCCACCGACCACCGGCCCGTCA
GCCCACGCGCCCGCCGCCCGGCGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_069869156.1\|7714377_7715037_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|377857
NZ_CP029823.1\|WP_099016903.1\|7732165_7733362_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262
NZ_CP029823.1\|WP_069869153.1\|7709667_7710153_-\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP029823.1\|WP_099013573.1\|7733471_7733660_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099013574.1\|7728999_7729734_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP029823.1\|WP_099013583.1\|7715773_7716355_+\|TMEM165/GDT1-family-protein	unknown	unknown	gnl\|CDD\|225030
NZ_CP029823.1\|WP_099013587.1\|7707972_7708674_-\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381602
NZ_CP029823.1\|WP_099013584.1\|7712433_7714212_-\|alkaline-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|277335
NZ_CP029823.1\|WP_099013581.1\|7717846_7718860_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NZ_CP029823.1\|WP_099013586.1\|7708758_7709448_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP029823.1\|WP_099013579.1\|7721752_7722319_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP029823.1\|WP_093702301.1\|7726630_7726828_-\|ferredoxin	unknown	unknown	gnl\|CDD\|379145
NZ_CP029823.1\|WP_099013578.1\|7722445_7723135_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099013585.1\|7710292_7712275_-\|FAD/NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|379196
NZ_CP029823.1\|WP_099013582.1\|7717057_7717708_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|319829
NZ_CP029823.1\|WP_099013577.1\|7723792_7725025_-\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237050
NZ_CP029823.1\|WP_099016904.1\|7725443_7726622_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|369639
NZ_CP029823.1\|WP_099013575.1\|7728241_7728988_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP029823.1\|WP_099013580.1\|7719021_7721112_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP029823.1\|WP_099013576.1\|7726875_7728120_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_069869156.1\|7714377_7715037_-\|HNH-endonuclease	gnl\|CDD\|377857	pfam07510, DUF1524, Protein of unknown function (DUF1524). This family of uncharacterized proteins contain a conserved HXXP motif. A similar motif is seen in protein families in the His-Me finger endonuclease superfamily which suggests this family of proteins may also act as endonucleases.	9.80036e-13
NZ_CP029823.1\|WP_099016903.1\|7732165_7733362_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	0.000161181
NZ_CP029823.1\|WP_069869153.1\|7709667_7710153_-\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	2.31672e-13
NZ_CP029823.1\|WP_099013574.1\|7728999_7729734_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.37332e-73
NZ_CP029823.1\|WP_099013583.1\|7715773_7716355_+\|TMEM165/GDT1-family-protein	gnl\|CDD\|225030	COG2119, COG2119, Predicted membrane protein [Function unknown].	8.00418e-22
NZ_CP029823.1\|WP_099013587.1\|7707972_7708674_-\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381602	cd13399, Slt35-like, Slt35-like lytic transglycosylase. Lytic transglycosylase similar to Escherichia coli lytic transglycosylase Slt35 and Pseudomonas aeruginosa Sltb1. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).	3.9448e-30
NZ_CP029823.1\|WP_099013584.1\|7712433_7714212_-\|alkaline-phosphatase-family-protein	gnl\|CDD\|277335	cd07389, MPP_PhoD, Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.03514e-21
NZ_CP029823.1\|WP_099013581.1\|7717846_7718860_-\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	6.26483e-11
NZ_CP029823.1\|WP_099013586.1\|7708758_7709448_-\|hypothetical-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.76781e-13
NZ_CP029823.1\|WP_099013579.1\|7721752_7722319_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.81558e-14
NZ_CP029823.1\|WP_093702301.1\|7726630_7726828_-\|ferredoxin	gnl\|CDD\|379145	pfam13370, Fer4_13, 4Fe-4S single cluster domain of Ferredoxin I. Fer4_13 is a ferredoxin I from sulfate-reducing bacteria. Chemical sequence analysis suggests that this characteristic [4Fe-4S] cluster sulfur environment is widely distributed among ferredoxins.	2.53179e-10
NZ_CP029823.1\|WP_099013585.1\|7710292_7712275_-\|FAD/NAD(P)-binding-protein	gnl\|CDD\|379196	pfam13454, NAD_binding_9, FAD-NAD(P)-binding.	1.4181e-48
NZ_CP029823.1\|WP_099013582.1\|7717057_7717708_-\|HAD-IA-family-hydrolase	gnl\|CDD\|319829	cd07527, HAD_ScGPP-like, subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p). This subfamily includes Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p). GPP1p and GPP2p are involved in glycerol biosynthesis, GPP1 is induced in response to both anaerobic and hyperosmotic stress, GPP2 is induced in response to hyperosmotic or oxidative stress, and during diauxic shift; overexpression of DOG1 or DOG2 confers 2-deoxyglucose resistance. These belong to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	7.96715e-63
NZ_CP029823.1\|WP_099013577.1\|7723792_7725025_-\|threonine--tRNA-ligase	gnl\|CDD\|237050	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP029823.1\|WP_099016904.1\|7725443_7726622_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|369639	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.	1.05549e-57
NZ_CP029823.1\|WP_099013575.1\|7728241_7728988_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	9.4911e-40
NZ_CP029823.1\|WP_099013580.1\|7719021_7721112_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.40964e-80
NZ_CP029823.1\|WP_099013576.1\|7726875_7728120_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	6.71127e-84

>NZ_CP029823.1|WP_099013580.1|7719021_7721112_+|MFS-transporter
MARDAGSPAPPPGAPGAVTRGPEEGRPRRSVLVAIGALLLGMLLAALDQTIVSTALPTIVSDLGGLEHLSWVVTAYLLASTAATPLWGKLGDQYGRKKLFQTAIVLFLIGSALCGLSRNMAELIAFRAVQGLGGGGLIVLSMAIVGDIVPPRERGRYQGLFGAVFSAASVLGPLLGGVFVDHLSWRWVFYVNLPIGIVALLVVASVLHIPVRRAAHTIDYFGTFLIAVVAAALVLMTSLGGVTFGWGSWQIVGLAVAGLLLLAAFVRVETRAAEPVLPLALFRSRTFTICAVIGFIVGFAMFGSMTYLPTFLQIVQGVSPTMSGLHLLPLVFGTLLASTVSGHLVSRTGRYKVFPVLGTAVTAVGLLLLHQLRESSGLVEMSAYFFVFGCGLGLVIQVLVLIVQNSVRYQDLGVATSGATFFRSIGASFGVSVFGTIFANNLGPQIATALAGRRLPAGITPGSLTSDPRTLGRLPPADQAAVRHAFSVSITDVFLYAVPVVLVAFLLAWYLREEPLRGSVTAPDGSEILASNPVQRTSRDECARALSLLGSREGRRKIYVDITRRADLDIRPAASWMLLRIHHYGSVEPALLAARSSVPLREITEAARQIEERGLGRRYGLELILTDDGRDAATRLYRAREASLAELLGDWWSPDRPTDLTKLVNELTHELCGSDAEQPREGNPRPDHRRPPPPRT
>NZ_CP029823.1|WP_099013581.1|7717846_7718860_-|peptidoglycan-binding-protein
MTAESCPHCFAPARANGRPGCTCAERAAASVATAGETDDQTHTQPIATLSEQRPDGPDPRDLRLFEEAERAEREKAEKGGTEETRVIDRVEERPRGDEDQGGDEVEDGDEAAAGDADGHGPGHARHRKSKRKVVATVLAGAAAVAVAGSLAIGTGLLGGDQKDDGGSGASEHTLADSTVSPPAEEELPAEEAGAPSGTPSASATPHPSVSGSARASASPREGGPPATARSSASASATSEATKPGPSASGGPTADPSESPEPPGPPVLREGDSGPEVAELQKRLTQLLLYIGVADGEYDAGLRRVVSSYQNQHDITDDPDGVYGENTRRDLESRTDEP
>NZ_CP029823.1|WP_099013582.1|7717057_7717708_-|HAD-IA-family-hydrolase
MSLTARALLLDMDGTLVNSDAVVERCWRRWAAEQGLDAERVLAIAHGRQAHATIAALLPDRPVEQNLADNQRMLEAETTDLDGVVPVPGAPAFMASLTGLPHALVTSADEALARARMGAAGLPLPEIRVTAEHVGASKPDPEGFLKGAAELGFTPADCIAFEDSEAGIAAGRAAGMRVIGVGPRAATHAPDVHVQDLEQVHVEALPDGTLRVHVQD
>NZ_CP029823.1|WP_099013583.1|7715773_7716355_+|TMEM165/GDT1-family-protein
MFSITVAAVVFGVVFLAELPDKTALAGLMLGTRYRASYVFVGVAAAFAIHVGLAIAAGSVLTLLPHRLLEAIVGALFLGGAAVLLLKKDDGEEEVRKPADQSFWKVSGAGFMLILVAEFGDLTQIMTANLAARYDDPLSVGVGAVLALWAVAGLGILGGRTLMRYVPLRLITKIAALVMLALGAFSLYEAITA
>NZ_CP029823.1|WP_069869156.1|7714377_7715037_-|HNH-endonuclease
MQCHPTRRRVYARRASVFGGFVALLGTLVLSGPTAQASPPAPPSAATARTQLASLTVKAEGSSDGYSRDKFPHWITQSGSCNTREEVLKRDGKNVQTDSSCAATSGTWYSEYDGATWSAASDVDIDHVVPLSEAWKSGANSWTTAQRQAFANDLTHSQLIAVTDNVNQSKGDQDPAEWLPPRSAYHCMYARMWVSVKYTYKLTLDSSEKSALSGILNGC
>NZ_CP029823.1|WP_099013584.1|7712433_7714212_-|alkaline-phosphatase-family-protein
MAGLRLGPLLRHVDWETGTGATVWVEADRPCEAEVRCADGAGGTARTWRIAGHHYALIPVAGLRPGGETAYRVLLDGEQVWPLPDSPFPDSTIRTPAPGTDSPGPAPVRVAFGSCRWAAPPSDASHDPVGPDALDTLAQALARAPELPRPDVLVLLGDQVYADETSAETRAWLAERRDLSEPPGEQVADYEEYTRLYYESWLDPEVRWLLSTVPSCMIFDDHDVIDDWNTSEAWQRRMRATPWWRERILSGLMSYWVHQHLGNLSPAELAADPLYAEVRAAEDGTEALREFAARADADPAYTRWSYRRDFGRTRLLMVDTRAARVLEEGRRAMLTDKELIWVREQAMDGLGGASGFPGPGPEGPGATGPEGPGVRGPEEPGVHGGYDHLLLGTSLPWLLPHFVHDVETWNASVCGGRRGGRWARIGEDLRQRGDLEHWAAFPESFDALTDTIAAVGGAPGAPATINVLSGDVHHAYVATPDWSRWPSRPPRSQVRQLTCSPVHNSIYASIRLGFRFGWSAAGRALGRVFKRHGRVPHSHLSWHKTGGPWFGNQLMTLTLQGRSAHLRLDQAQSDPAGGGARLVAALETDWAG
>NZ_CP029823.1|WP_099013585.1|7710292_7712275_-|FAD/NAD(P)-binding-protein
MAGDLHAIAVVGAGPRGTSVLERLCASAPELASGTPLTVHMVDPSPPGAGRVWRTAQPDELLMNTVASQVTLFTDASVECGGPVRTGPSLYEWVTARGLAPGLGPDDYPSRALYGRYLEWVFGEVVRGAPDTVTVRAHRARAVRLEERADGEQVLTLDDGSRLTGLCAVVLAQGHLPAAADPTERRYAAHAERHGLRYYPPANPADIDLSPIAPGEPVLLRGLGLNFFDHMALLTSGRGGTFAPNGQGGLVYRPSGREPRLYAGSRRGIPYHARGDNAKGPCGRHTPLLLTPDVLDHFRKRADSGDPPDFLTEIWPLVAKEAETVYYEALLALRAPDTRAPAAPEAPEAPGAGSGTPVSFTPARFRGHFLATGHGSPEEAAVLSEYGIPEAERWSWDAVAQPLRGRRFTGRDDFRRWLLAYARQDVAHARLGNVEGPVKAALDVLRDVRNEVRLIVDHGGLTGASRRAHLDRWYTPLNAFLSIGPPRRRIEEMAALIEAGVLDVLGPRLEVTLESPDQGAAMAGFAARSAEVPGAPVAATTLIEARLPEPDVRRTADELLNHLLETGQCRPHRVEGYETGGLDVTTAPYRLVDAHGRPHPRRFAIGVPTEGVHWVTAAGARPGVNSVTLCDTDAVARAALRVVTTGEPRQEGAPMCAVGL
>NZ_CP029823.1|WP_069869153.1|7709667_7710153_-|DoxX-family-protein
MSSSTPRNLGEALDNAKPYVLSLFRIVVGLLFFCHGASSLLGWFGGIMGTGKTIDAGTWPSWYAAVIQLIGGALVMLGLGSRSAAFISSGSMAYAYFHEHQPEKLWPIQNGGEPAAMFCWTLLLLVFTGPGPWALDRIFGSGPARESEAAPEARREPSIVR
>NZ_CP029823.1|WP_099013586.1|7708758_7709448_-|hypothetical-protein
MLEHLGSLTNTPWIYAVIGASVLLDVFLPVLPSGVLVITAATAAAGTTVDAVGVVRQAGAADFPAMFGLMLCAATASVLGDMVAYRLAWRGSDRLDRAIARSRRLTSAQEKLGTALVRGGGPLVVIARFAPAGRSVVSLSAGAAHRRVKEFLPWSAVAGLAWAAYSVALGYVGGQWLGATWLGTAVSVLALFAAGAGAAYVMKRPAEGGSGPLPATPAGPPMPPAHQAR
>NZ_CP029823.1|WP_099013587.1|7707972_7708674_-|lytic-transglycosylase-domain-containing-protein
MLTRAAGMAAAFVAGLALVVAAVLVVRHLTEPSEPELPVVPDTRRPVLEAAVRGACSPLSVPLLAAQIDAESGWRPDADSGHAQGISQFSPVTWKEWGKDGNGDGKADVWEPRDAIPSQARYMCHLYEVVKAVPGSGTRLGSTRLALAAYNAGPNAVLRARGIPKILETQEYVDKILTDLLPKYEESEERYQRSEAKHRRTDRASAAPSTPSSPSTDPSATASGVSPSATRQP
>NZ_CP029823.1|WP_099013579.1|7721752_7722319_-|GNAT-family-N-acetyltransferase
MTSTPFAQAGSSGDAYPTYPPYPASPAWTVAARPVDDPVSAVLLREYLVDVADRYYQLHEGRDSTREEIEQAHAEMPSDDLAPPGGVFLLAHHDGELAGCAGLRLLDARTAELKRVFVRPAKRGLGGGAALLTAVEAAAGALGAGRIVLDTRRDLVEARALYARHGYREVPAFTEGPYAEVWMGKELG
>NZ_CP029823.1|WP_099013578.1|7722445_7723135_+|hypothetical-protein
MSTGAISIVVVVAVVLAAALIVRVVRAGAGRRERALRRRFGPEYELNVAQHAGDTKAAQRELEERLRLYGELRTQPLPGELRERYVAEWAGIQELFIESPERSVTGADRLLARLAHDRGYPSDRYEEQIAALSVHHADHIQGYRQIHDSAARAREGRADTEELREAVVHARPFFEDLVRPPHHATTRPETARQHHHGERHSGNRLQRWLAGGGAGTGTRFGHTRKGGAW
>NZ_CP029823.1|WP_099013577.1|7723792_7725025_-|threonine--tRNA-ligase
MPDHRKLGRELGLFDTDPLIGAGLPYWLPDGATVRHTLEEYIRDAERRAGYRHVYSPVLGKRELYELSGHWSHYSDDMFPPMELGTEPGAEQVVLRPSLCPHHAVIYRSRAHSYRELPLRMAELGGMYRSELSGVLGGLTRVRAIQLNDAHIFCTLDQVADEAGAALELIRRAYEALGIAPARYRLSLPGPGGKYVAAPGMWRRSTALLTDVLDRSGLPYEAEEGEAAFYGPKIDVQVADGAGRESTLSTVQVDFHQPERFDLHYIGPDGARHRPVMVHRSIIGSVERAVAHLIEEHGGAFPAWLAPTQLVVLPISVAELEQAEEVVRRCEGLGLRAELAGPERGSLGARIREYRLVPYQAVIGAREAGEGQVALRLRDGRRLGPQPAGEALARIGALVGAHGTELWDAA
>NZ_CP029823.1|WP_099016904.1|7725443_7726622_-|FAD-dependent-oxidoreductase
MVVGASAAGLAAVETLRREGYEGTLTLIGDEPYHPYDRPPLSKQILGGQWEPDRVPLRSPADLDALGLDLRLGVTATGLDLAGRTVALADGARVPYDGLVIATGVRPRRLPGDGAERAHVLRTLDDALALRDRLGPGRRLVVVGAGFLGAEAAAVASGLGTEVTLLEPAPVPLAPAVGERVGRMLTRAHHDHGVDLRTGVMVAEVADGGVRLSDGTLVEADEVLVAIGSVPNTGWLEGSGLTLGDGLECDEYSAAAPDVYGAGDVARWHNPLFGTAMRIEHRTNATEQGMAVARNLLRPDARKPFAPVPYFWSDQYDFRIQAHGWLRGHEEVAVVEGALEDRKFLAAYRSGDRVAGVLAVGMPPKAVRTWRQAVATRAAWRDAVGELVREGA
>NZ_CP029823.1|WP_093702301.1|7726630_7726828_-|ferredoxin
MRVEVDVPKCVASGQCVMIAPDVFDQREEDGIVVLLDERPASELHADVRESAVVCPAAAIRVVEK
>NZ_CP029823.1|WP_099013576.1|7726875_7728120_-|cytochrome-P450
MTETLAETTAEAEEPLPEFPMPRAAGCPFDPPPATRALHTERPVTRVRLWDGSAPWLVTRYADQRALLGDPRVSSEATLPGFPHASAGFRENAGRRRSFITMDDPEHARIRRMVTGPFAIKRIEALRPEIQKITDDLIDTMLAGPTPVDLVRALALPLPSLVICKLLGVPYEDHDFFQRNSSLLINRHSSVEDVVGANEALTDYLEGLVVAKLADPADDMLSELAGRVRAGELTQRDAANMGVLLLVAGHETTANMIALGTVALLENPDQLAVLRETDDPKAIARAVEELLRYLTIVHNGRRRVALEDIEIGGETIRAGDGIIVYTGTGNWDAEVFPEPERLDIGRDARRHIAFGFGIHQCLGQPLARVELQVVYGTLYRRIPTLRLATGIDQLPFKEDGLVYGVYELPVTWTS
>NZ_CP029823.1|WP_099013575.1|7728241_7728988_-|HAMP-domain-containing-histidine-kinase
MGEGHEDGQARGEDAYERQQRLEVLLHELRTSLTTIRGWAELPLQGLSDDPELMVRALRRIQDEADHMHQAVQQVFPPTDSSWVRPLDPEPVDLRDVADEAVADLGLLDPERPIARENCGRATVVADNRMLRHAIRNLLGNALRHTPAGSPVTVAVRGPVAGAGGRPCVELSVSDQGPGMSPRDIARLTSPRAEDGRVELGGGLGLTIVRRVVERHGGEVSVRSAPDRGTTVTVAFPTVGTVSDSSGN
>NZ_CP029823.1|WP_099013574.1|7728999_7729734_-|response-regulator-transcription-factor
MYGSVSEKPAPARGNGQRILVVDDESRIAELLSTTLELAGYRVGTAATGGEALDRVGRDRPDLVILDVMLPDLDGFTVCRRLVAADENHPPVLFLTARDSLDSLVTGLGIGGNDYVTKPFRIAEVLARVQALLRTRNQRCEEPSPSYADLVLDDTTRQALRGRRALELTPAEFRLLRYLLVNAGQVLSKEQIGEHLWVADHGRYGDNAIEKLVSRLRHKVDETGPALIHTRRGFGYWLGRLASA
>NZ_CP029823.1|WP_099016903.1|7732165_7733362_-|helix-turn-helix-domain-containing-protein
MDSGEFSQRVRDLLSDRGMSVRAVARHLNYDHAYLSRVLSGKQRPSTQLVTELDQLLRANGKLAEIAARVTPPTVSPEVAESPAITDRILKLNEARGADFAHAIRETSHRLVVLDNELSGVSIAEPAGRAFKVVHRRLGVGDYEPRYERDIQSAAAELAEVAGWALFDAERDGAARRFNQEALFLANLSGDRSIALLTLQNMAMHSEWRGRNQEALSIARSVLNRRRLSPRVEAMFRMREAKGLVGTGRTSDAIESLQRARSLIEDGNDVGEPDWAWWVTHGEVDGHWGHTLQIAGDVEKAIELLLQSVQPGRGVATGYASLSSARLAQCLLDVRAWRDAEAIIKSLVIAAPGVSSGRTFRIISHVAKQHERLNGAPPSLTDTLAHLTEKLSEDPFTL
>NZ_CP029823.1|WP_099013573.1|7733471_7733660_+|hypothetical-protein
MSDTVNGRAMMTMRVSRDSGKTYGPTRVVRSTEPLRPLETSVWPPCRCPRCVSAHVADRHPR

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Crispr_ID: NZ_CP029823_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_12

7927947-7928050

Orphan

Consensus_repeat	Method
GGCGACTTCGGCGGTGGCTACGG	CRISPRCasFinder

2 spacers

csa3

The CRISPR arrays of NZ_CP029823_12

>merge|NZ_CP029823|12|7927947-7928050|CRISPRCasFinder
GGCGACTTCGGCGGTGGCTACGGCGACTCCGGGAACGGCGGCGACTTCGGCGGTGGCTTCGGGAACGGTGGCGACTTCGGCGGTGGCTTCGGGGGAGGCTTCGG

>NZ_CP029823|12|10|7927947-7928050|CRISPRCasFinder
GGCGACTTCGGCGGTGGCTACGG	CGACTCCGGGAACGGC
GGCGACTTCGGCGGTGGCTTCGG	GAACGGTGGCGACTTCGGC
GGTGGCTTCGGGGGAGGCTTCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_099013481.1\|7928236_7929025_+\|Ig-like-domain-repeat-protein	unknown	unknown	gnl\|CDD\|379864
NZ_CP029823.1\|WP_099013485.1\|7919620_7920676_-\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176234
NZ_CP029823.1\|WP_069869301.1\|7932672_7933623_-\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
NZ_CP029823.1\|WP_069869288.1\|7915996_7917355_+\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP029823.1\|WP_069869289.1\|7917634_7918444_+\|carbon-nitrogen-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|143605
NZ_CP029823.1\|WP_069869300.1\|7931447_7932128_-\|DUF4191-domain-containing-protein	unknown	unknown	gnl\|CDD\|379389
NZ_CP029823.1\|WP_069869294.1\|7921583_7922093_+\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|376376
NZ_CP029823.1\|WP_099013483.1\|7925348_7926566_+\|Ig-like-domain-repeat-protein	unknown	unknown	gnl\|CDD\|379864
NZ_CP029823.1\|WP_099013487.1\|7918440_7918830_+\|cupin	unknown	unknown	gnl\|CDD\|380437
NZ_CP029823.1\|WP_099013480.1\|7930783_7931251_+\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP029823.1\|WP_099013477.1\|7937686_7939030_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|366721
NZ_CP029823.1\|WP_069869298.1\|7929119_7930529_-\|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl\|CDD\|273198
NZ_CP029823.1\|WP_069869392.1\|7933929_7934745_-\|lipoyl(octanoyl)-transferase-LipB	unknown	unknown	gnl\|CDD\|184638
NZ_CP029823.1\|WP_099013484.1\|7920795_7921500_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379115
NZ_CP029823.1\|WP_069869305.1\|7939238_7940147_-\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|273800
NZ_CP029823.1\|WP_099016890.1\|7922151_7923984_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP029823.1\|WP_079260419.1\|7924325_7924964_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP029823.1\|WP_099013478.1\|7936667_7937432_-\|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|197713
NZ_CP029823.1\|WP_020871972.1\|7932138_7932336_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099013486.1\|7918831_7919464_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_099013481.1\|7928236_7929025_+\|Ig-like-domain-repeat-protein	gnl\|CDD\|379864	pfam16640, Big_3_5, Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold.	1.29305e-10
NZ_CP029823.1\|WP_099013485.1\|7919620_7920676_-\|zinc-binding-dehydrogenase	gnl\|CDD\|176234	cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	4.3328e-138
NZ_CP029823.1\|WP_069869301.1\|7932672_7933623_-\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
NZ_CP029823.1\|WP_069869288.1\|7915996_7917355_+\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.59459e-163
NZ_CP029823.1\|WP_069869289.1\|7917634_7918444_+\|carbon-nitrogen-hydrolase-family-protein	gnl\|CDD\|143605	cd07581, nitrilase_3, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	9.04294e-113
NZ_CP029823.1\|WP_069869300.1\|7931447_7932128_-\|DUF4191-domain-containing-protein	gnl\|CDD\|379389	pfam13829, DUF4191, Domain of unknown function (DUF4191).	1.32889e-105
NZ_CP029823.1\|WP_069869294.1\|7921583_7922093_+\|inorganic-diphosphatase	gnl\|CDD\|376376	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase.	1.78388e-79
NZ_CP029823.1\|WP_099013483.1\|7925348_7926566_+\|Ig-like-domain-repeat-protein	gnl\|CDD\|379864	pfam16640, Big_3_5, Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold.	1.09624e-09
NZ_CP029823.1\|WP_099013487.1\|7918440_7918830_+\|cupin	gnl\|CDD\|380437	cd20303, cupin_ChrR_1, Marinobacter hydrocarbonoclasticus anti-ECFsigma factor ChrR, and similar proteins; 2 heterologous tandem repeats of cupin domain. This family contains bacterial anti-sigma factor such as ChrR from Marinobacter hydrocarbonoclasticus. Anti-sigma factor ChrR is a member of the ZAS (Zn2+ anti-sigma) subfamily of group IV anti-sigmas. It inhibits transcriptional activity by binding to the ECF sigma factor E (sigmaE), an essential factor to mount a transcriptional response to a singlet oxygen and for viability when carotenoids are limiting. This protein family likely contains two distinct homologous functional domains belonging to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	3.35845e-09
NZ_CP029823.1\|WP_099013480.1\|7930783_7931251_+\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	1.40991e-10
NZ_CP029823.1\|WP_099013477.1\|7937686_7939030_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|366721	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase. This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.	8.99008e-40
NZ_CP029823.1\|WP_069869298.1\|7929119_7930529_-\|type-I-glutamate--ammonia-ligase	gnl\|CDD\|273198	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I. Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation. [Amino acid biosynthesis, Glutamate family].	0
NZ_CP029823.1\|WP_069869392.1\|7933929_7934745_-\|lipoyl(octanoyl)-transferase-LipB	gnl\|CDD\|184638	PRK14345, PRK14345, lipoyl(octanoyl) transferase LipB.	7.09059e-114
NZ_CP029823.1\|WP_099013484.1\|7920795_7921500_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379115	pfam13305, WHG, WHG domain. This presumed domain is around 80 amino acids in length. It is found to the C-terminus of a DNA-binding helix-turn-helix domain. This domain may be involved in binding to an as yet unknown ligand that allows a transcriptional regulation response to that molecule. The domain is named WHG after three conserved residues near the C-terminus of the domain.	1.75523e-11
NZ_CP029823.1\|WP_069869305.1\|7939238_7940147_-\|TIGR01777-family-protein	gnl\|CDD\|273800	TIGR01777, Hypothetical_UPF0105_protein_Rv2216/MT2273/Mb2239., TIGR01777 family protein. This model represents a clade of proteins of unknown function including the E. coli yfcH protein. [Hypothetical proteins, Conserved].	1.48174e-128
NZ_CP029823.1\|WP_099016890.1\|7922151_7923984_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.95479e-86
NZ_CP029823.1\|WP_079260419.1\|7924325_7924964_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	8.97895e-38
NZ_CP029823.1\|WP_099013478.1\|7936667_7937432_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197713	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor.	1.56152e-14
NZ_CP029823.1\|WP_099013486.1\|7918831_7919464_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	6.10235e-34

>NZ_CP029823.1|WP_099013483.1|7925348_7926566_+|Ig-like-domain-repeat-protein
MASPTVTLVTAAPNPAVAGQSVTLTATVIPLGAGTPTGTVTFVVGGGPTLTGTLSGGTTSVTVPNLTLGTHIVTATYNGDVNFTSSTGTTAVVVIQASTTTSVISAPDPSTLGQPVTFTATVTPVAPGAGVPTGSVTFIIGGSGGGTFVQPLSAGTATLSLSTLGVGTHTVVALYGGSADFLASSGTDTHTVNPGPAATTTTLASSVNPSVFGQPVTFTATVTPNLPTTGTPTGSVTFVISGTGGGTFTEPLSGGTATFITSGLGTGSHTVTATYSGDADFATSTSAPLTQTVDTANSITSLSSNPNPAEEGTPIDFVAFVAAMAPGDGTPTGTVAFTLVMGTTTVEMSVPVDAFGFAFLSDQILAAGTWDVSAVYSGDANFGASGVSDYTQVVTGAVSGVQAAI
>NZ_CP029823.1|WP_079260419.1|7924325_7924964_+|LysE-family-translocator
MVSIDRLLAFAAMSFLLIVIPGPSVLFVVGRALAQGRRAALTTVVGNTLGAYVLVVAVALGVGSVVERSAVVFTTLKLVGAAYLVHLGVKAVRQRRSLHAAFTGDGPAHGGLRTLWEGFAVGVANPKTIVFFAAVLPQFVDREQGHVAWQMLLLGLIFNAIAVISDSVWGLAAATARTWFARSPRRLAMVGGVGGLSMIGLGVTVAATGRAD
>NZ_CP029823.1|WP_099016890.1|7922151_7923984_-|ABC-transporter-ATP-binding-protein
MTAWERNPVTTRAMARRLPQLVRRSLALAWKVDRKAVVALLVCQALSGFFEAFGLLATTGTITALISSGQITDRLREALPSIAVLAGAAGLRALLGIAVGNISSRLSPRISREAETQMLDAAINAELAAYDNPGFNDKWDAADRGAEVARDLITESQQLMACLSSLIAAAGVVTVLHPALLPLLLLAALPQGIAGMKAARVQYETSRAMSADRRTLGLLRWYMMDKDIADQLRSGTMAEFLLKRYRAIGARVDAATDKAVHRGARYAVLGAVAGGVASGLVWVSLALLLGAGRMSVASAGTAVFALRTVGASLQGMVGYGTRLFRTGLYLDDWAEFIEEAGGHRMVRGTRVPAPPRVIRTEGLTYAYPESDAPALDDVTLEVRQGEVLALVGENGSGKTTLSKLLTGLYLPTKGAVTWDGVGVEELDPQAMWRHTAVVPQDYAHWPLSARDNITLGQPHGGDERVREAAVRSGAHEVVDGLRSGLDTLLARQWWGGVELSGGQWQRIALARAFHRPAGLLVMDEPTSALDARAEHRIFAGLRRMAEDRAVVLVTHRLANVAVADRIVVLERGRVIQQGTFAELTGSPGLFRELWELQNDRGVPAPRGETP
>NZ_CP029823.1|WP_069869294.1|7921583_7922093_+|inorganic-diphosphatase
MEHGEFDVVVEIPEGSRNKYEMDHETGRIRLDRMLFTSTKYPADYGYVDHTLGRDGDPLDALVTVAEPTFPGCVILCRAIGMYCMRDEQGPDEKILCVPAHDPRYVGVQDIEDVPEFDRKEITHFFEVYKDLEPGKSVEGSHWEGRDRAYAEIAASRARAAETGRFQSP
>NZ_CP029823.1|WP_099013484.1|7920795_7921500_+|TetR/AcrR-family-transcriptional-regulator
MATARRERYRKQTREEAKAVALAQLSESGTAGISVNAIAKAMGMTGPALYRYFASRDELLTELITDTYRDLAETLARAVADAAPADRFRALARALRDWAKRQPDRYLLIYGTPVPGYHAPPETTEIAAGLMRTIFDACATVGEAGEAGGGGVGADGSRQQPLTELEAELARHLEGTGPWGPGEEPGGEMKGRALRTWTRLHGVISLDVQGQFTGMGFDPSVLFEAEIDALVRGG
>NZ_CP029823.1|WP_099013485.1|7919620_7920676_-|zinc-binding-dehydrogenase
MITEVVLPGQVEPEGLELRTRPLPEPGAGQALVAVEASGVSFAEQQMRRGKYYDQPPFPFVPGYDLVGTVVSTGPGVDPALRGRRFAALTKIGGWASHTLVDAGDLVEVPEGVDAAEAETVVVNGITAWQMLHRVAKVRPGMTVLVHGANGGVGTTLVQLARHAGIKVIGTASPRHHDAVRALGATPLDYRDPDLPGRVRALAPGGVDAVFDHVGGEGIVDSFRLLARGGTLVSYGTAATRDVPGSSRAPVLKLFARLFLWNLLPNGRGAHFFNLWAGRRRKAAYQARIRADLGQVLALLASGDFTAMVAARIPLSDAAEAMRLAESGTVTGKVVLVADQDARQGGEEGAR
>NZ_CP029823.1|WP_099013486.1|7918831_7919464_-|GntR-family-transcriptional-regulator
MPAQSGREKAYAFLKETVLTDPDMQGSFLTEQEIADRIGISRTPIREALLLLAAEDLVQLVPKRGAHIAPLSGREITELMELRGIVERYAAEHAIETGTVPVGKLTELLERQRELMGPEQAKEFIAIDHLFHATMIAAVGNELLNRHYEGLRSRQIRAGVVALYNQTGRQKEVLGEHRAILEAVAAGDTEAARTAISAHLESTLKVLLAG
>NZ_CP029823.1|WP_099013487.1|7918440_7918830_+|cupin
MSGTGGAKPEREFHLPSGPWRRPPGAAAGVSEQILAVDGSGTHTTALVCWEPGTDTSSSGVARHDGWEEVYLLEGSMRDLTLGETFSRGFYACRPPGMPHGPWVSEEGVTMLVITYPEAVPVPGGGAGR
>NZ_CP029823.1|WP_069869289.1|7917634_7918444_+|carbon-nitrogen-hydrolase-family-protein
MPLRIALSQITTGPDPASNLALLRRETQRAAEAGARLVAFPEAAMACFGTRLGPIAEPLDGPWATEVRQIAKDAGLVVVAGMFTPAPDGRVTNTLLATGPGVETSYDKIHLYDAFGFAESKTVAPGSEVVTFDLDGVRIGLATCYDVRFPELFRAHADAGAVLSLLPASWGAGPGKREQWELLTRARALDATVWLAAVGQADPAASGLTAATSAPTGIGHSALIGPDGTVRERLDAGPGLLVGEVDTEEVTAVRRTVSVLANRRLGVQP
>NZ_CP029823.1|WP_069869288.1|7915996_7917355_+|MHS-family-MFS-transporter
MQPTASSAPQPRADRSGVRRAFVASLTGTALEWYDFAVYSAAAALVFGDLFFPSKDPFTGTLLAFSTYAVGYLSRPLGGFVFGRLGDVIGRKKVLIATLVLIGGATLLIGLLPTYATVGVAAPAALVLLRFAQGVGVGGEWGGAVLLSSEFGDPRRRGFYASAAQVGPPAGNLLANGVLAALGAALTEDQFLSWGWRVAFLLSGALVAFGLWVRAKLEETPVFKAMEAAQDRPEAPLREVFTTQPKALTAAILSRVAPDVLYAMFTVFVLTYATEELDMSRGSALTAVLIGSSLQIVLIPLAGALSDRVNRRLLYGGAAVAAGVWPFLFFPLVADGSWALLTLGVVGALVIHSLMYGPQAAFVAEQFSPRLRYTGSSLAYTLAGLIGGAIAPLLFTALLGTYHAWVPLAIYIAITAVVTVIGLWLGRDPGSAEDEEPLPLPVGQTASSTTVS
>NZ_CP029823.1|WP_099013481.1|7928236_7929025_+|Ig-like-domain-repeat-protein
MAVAASRAPTGATDRWVPQLPGTATRDVPVWIAVGAHPLAADAPPRLVSACVASNGPPPHTTWRANMATPTITLVTVSPNPITVGQSVTLTATVIPLGPGTPTGDVTFVITGGPTVTGTLSGGTTSVTVPGLGVGAHAVLGNYNGDTNFSPSTGANVILVVQAATTTAVSSAPDPSTQGEPVTFTATVTPVAPGAGVPTGTVTFIIGAVGGGAFVQPLTAGTATLTLDTLGTGTAPVVAIYNGDTSFLPSSGTDTQTVNPAA
>NZ_CP029823.1|WP_069869298.1|7929119_7930529_-|type-I-glutamate--ammonia-ligase
MFQNADDARKFISDEDVKFVDVRFCDLPGVMQHFTVPAEAFDPNEELAFDGSSIRGFQAIHESDMALRADLSTARVDPFRRDKTLNINFFIHDPITGEQYSRDPRNIAKKAEAYLASTGIADTAYFGPEAEFYVFDSVRFDTKANESFYHIDSEAGAWNTGALQDNRGYKVRYKGGYFPVPPVDHFADLRAEISLELNRAGLQVERQHHEVGTAGQAEINYKFNTLLAAADDLMLFKYIVKNVAWKNGKTATFMPKPIFGDNGSGMHVHQSLWQGGSPLFYDEQGYAGLSDTARYYIGGILKHAPSLLAFTNPTVNSYHRLVPGFEAPVNLVYSQRNRSAAMRIPITGSNPKAKRVEFRAPDSSGNPYLAFSALLLAGLDGIKNKIEPAEPIDKDLYELAPEEHAGVPQVPTSLPAVLDSLEADHEFLLQGGVFTSDLIETWIDYKRTNEIAPLQLRPHPHEFELYFDV
>NZ_CP029823.1|WP_099013480.1|7930783_7931251_+|RDD-family-protein
MDKRQAIGSWLSGPRAAAEEMGVDFGYRGQGLGLPESGPGSIAPLGRRFGALFIDWGLCLLVSYALLSGRDAQAAGNWALLVFLGLSLVTVGTVGATPGKLLLRLRVIGEGGMRLSLPKAVLRSVLLVLVIPAVVWDRDTRGLHDRLSRAVQIRV
>NZ_CP029823.1|WP_069869300.1|7931447_7932128_-|DUF4191-domain-containing-protein
MARKETSENPGRLKQIALTYKMTKRVDPKVTLVVAGVGIVTFGVLLAIGFWIGHPIFLGILGFVLAFLAMAIIFGRRAERAAFGQMEGQPGAAAAVLENVGRGWSVTPAVAMNRNQDVIHRAVGKAGIVLVAEGNPNRVKSMLAAEKKKMARIVAEVPVHDVIVGSGEGQVEIKKLRTTLLKLPRVLPGAQVTVVNDRLRALGDLMSNMPIPKGPMPKGMRMPKGR
>NZ_CP029823.1|WP_020871972.1|7932138_7932336_-|hypothetical-protein
MPAAPVRPSVTDALLVLEGLLLRGGQRTARRNAWTAVLEDRRRAKDRDEAEHVLEAVSTGASQAT
>NZ_CP029823.1|WP_069869301.1|7932672_7933623_-|lipoyl-synthase
MSAVAPDGRKMLRLEVRNSQTPIERKPEWIKTRAKMGPEYTELHGLVKREGLHTVCQEAGCPNIYECWEDREATFLIGGDQCTRRCDFCQIDTGKPQALDRDEPRRVAESVRTMELKYATITGVARDDLEDGGAWLYAETVRQIHSLMPDTGVELLIPDFNAVPEQLAEVFSARPEVLAHNVETVPRIFKRIRPGFRYERSLEVITKAREAGLVTKSNLILGMGEERAEISQALQDLHDAGCELITITQYLRPSARHHPVERWVKPQEFVELKEEAEEIGYAGVMSGPLVRSSYRAGRLYQQAVERRNVAVASQAV
>NZ_CP029823.1|WP_069869392.1|7933929_7934745_-|lipoyl(octanoyl)-transferase-LipB
MTTASPGAAPGSSALRYVHLGFGADAVDYEEAWQEQRRVHAARFADEIPDTCLLLEHPPVYTAGRRTADNERPLDGTPVVDVDRGGKITWHGPGQLVGYPILKLPRPVDVIAHVRRLEEALLRTCAEFGLETTRVEGRSGVWVLGDPVEQRPALGGLKLDFDPRLADEEFDARLNGPEYAPSNAGQRREDRKLAAIGVRIAKGVTMHGFSLNCDPDNTWFDRIVPCGIRDAGVTSLSEELGRDVPIAEVLPVIERHLREVLESAVPLPRAV
>NZ_CP029823.1|WP_099013478.1|7936667_7937432_-|helix-turn-helix-transcriptional-regulator
MATTTGARDADIARAAAAIADPSRARVLTALLEGRALPASVLATEAGVSASTVSGHLAKLLEAGVVRVERHGRHRYYRLTGPAVGEALEALARIAPPLPVTSLRQSSHAHALRRARTCYDHVAGALGVALLAALLERGVLEGGDGRFHPEAAESDRLSAPGNDTTYRLTEPGRAALAAFGVDADGLVAGRRPLIRYCVDWTEQRHHLAGALGAALTDRLFALDWIRRGGRRRVVHLTDAGRTGLERTFGVVLDN
>NZ_CP029823.1|WP_099013477.1|7937686_7939030_-|FAD-dependent-oxidoreductase
MLKRAHRTDVVIVGAGLAGLAAAHRLTGAGVAVTVLEAAPRVGGRMTTDTVDGFRLDRNGHLMNTSFPELRRTPGLGALALRPLAQGVLVHSEGRTHRVDTPRSMRGAFTTARALANAARAPLGSGLDQARLGAALGRLAALPADRLLARPDRPVSETLGGRGLPARTVEGVLRPLLVSLLSDPDLTTSSRCADLALRGYARGRLCLPAGGASTVPELLAAALPPGTVRTGVRAVSASTTAVATAEHGEFGCRAVLVATGAHDAAGLLPGLRVPAFHPVTVVHHTADRPPLREPALILAAGGRGPVAHTMVASEVDPSRTPPGRVLITSTVLGTPAALPTAELDRSVRAQLAAVYGTSTAGWQLLAAHHDPYAVPAMPAPHDPRRPVRLLSGLYVCGDHRDSSTVQGALASGRRAARAVLSDFGAPPDSGSGTTPDTGPDPFPAAAA
>NZ_CP029823.1|WP_069869305.1|7939238_7940147_-|TIGR01777-family-protein
MVTMRIAVTGSSGLIGTALVRSLREDGHQVVRLVRRSPRAEDEAEWDPRRQWVDTAGLMGCEAVFHLAGAGVGDRRWTDAYKKEIRDSRVLGTAAIAEAIASLDTPPRVLVSGSAIGFYGDTGERAVDESAPPGHGFLPDVCQDWEEAAGAAQEAGVRTAFARTGLVISAEGGAWGRLFPLFKLGLGGRMGSGHQYWSFIALRDHIAALRHILDTPELTGPVNLTAPTPVTNREITAAMGRVLRRPTLFSVPAPALRIALGEMSGDVLGSVRAVPRRLLDSGFTFAYPHVDEAIKAALTQEG

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Crispr_ID: NZ_CP029823_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_13

8350025-8350096

Orphan

Consensus_repeat	Method
CATGACGGGGCCGACCCCGGGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP029823_13

>merge|NZ_CP029823|13|8350025-8350096|CRISPRCasFinder
CATGACGGGGCCGACCCCGGGACGAGCCCGGTTCCAGGAGGGCCGGCTTCATGACGGAGCCGACCCCGGGAC

>NZ_CP029823|13|11|8350025-8350096|CRISPRCasFinder
CATGACGGGGCCGACCCCGGGAC	GAGCCCGGTTCCAGGAGGGCCGGCTT
CATGACGGAGCCGACCCCGGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_099013315.1\|8354197_8354737_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|182339
NZ_CP029823.1\|WP_069874698.1\|8356257_8356920_+\|DNA-3-methyladenine-glycosylase	unknown	unknown	gnl\|CDD\|376746
NZ_CP029823.1\|WP_069874683.1\|8350152_8350956_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_069874695.1\|8355306_8356089_-\|sporulation-protein	unknown	unknown	gnl\|CDD\|369195
NZ_CP029823.1\|WP_099013319.1\|8343768_8346420_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP029823.1\|WP_069874688.1\|8352533_8353493_+\|SPFH/Band-7/PHB-domain-protein	unknown	unknown	gnl\|CDD\|223407
NZ_CP029823.1\|WP_099013321.1\|8340704_8341937_-\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP029823.1\|WP_093702244.1\|8340012_8340531_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|224973
NZ_CP029823.1\|WP_099013318.1\|8346544_8347315_-\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381605
NZ_CP029823.1\|WP_099013317.1\|8348912_8349554_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP029823.1\|WP_099013314.1\|8357087_8357336_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_069874708.1\|8353588_8354092_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NZ_CP029823.1\|WP_099013316.1\|8349692_8349932_+\|chaplin	unknown	unknown	gnl\|CDD\|367652
NZ_CP029823.1\|WP_099013323.1\|8337949_8339374_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340897
NZ_CP029823.1\|WP_079257139.1\|8354814_8355150_+\|barnase-inhibitor	unknown	unknown	gnl\|CDD\|376530
NZ_CP029823.1\|WP_099013322.1\|8339677_8339896_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_069874685.1\|8351907_8352381_+\|NfeD-family-protein	unknown	unknown	gnl\|CDD\|224501
NZ_CP029823.1\|WP_069874706.1\|8351066_8351858_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044
NZ_CP029823.1\|WP_099016869.1\|8347762_8348920_+\|GAF-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP029823.1\|WP_099013324.1\|8337137_8337812_-\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_099013315.1\|8354197_8354737_-\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	1.04852e-60
NZ_CP029823.1\|WP_069874698.1\|8356257_8356920_+\|DNA-3-methyladenine-glycosylase	gnl\|CDD\|376746	pfam02245, Pur_DNA_glyco, Methylpurine-DNA glycosylase (MPG). Methylpurine-DNA glycosylase is a base excision-repair protein. It is responsible for the hydrolysis of the deoxyribose N-glycosidic bond, excising 3-methyladenine and 3-methylguanine from damaged DNA.	1.32718e-89
NZ_CP029823.1\|WP_069874695.1\|8355306_8356089_-\|sporulation-protein	gnl\|CDD\|369195	pfam07070, Spo0M, SpoOM protein. This family consists of several bacterial SpoOM proteins which are thought to control sporulation in Bacillus subtilis.Spo0M exerts certain negative effects on sporulation and its gene expression is controlled by sigmaH.	8.15185e-110
NZ_CP029823.1\|WP_099013319.1\|8343768_8346420_+\|FHA-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.44078e-74
NZ_CP029823.1\|WP_069874688.1\|8352533_8353493_+\|SPFH/Band-7/PHB-domain-protein	gnl\|CDD\|223407	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones].	3.32567e-68
NZ_CP029823.1\|WP_099013321.1\|8340704_8341937_-\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.08583e-92
NZ_CP029823.1\|WP_093702244.1\|8340012_8340531_+\|histidine-phosphatase-family-protein	gnl\|CDD\|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	2.29576e-45
NZ_CP029823.1\|WP_099013318.1\|8346544_8347315_-\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381605	cd13402, LT_TF-like, lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	3.29533e-28
NZ_CP029823.1\|WP_099013317.1\|8348912_8349554_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.78715e-80
NZ_CP029823.1\|WP_069874708.1\|8353588_8354092_-\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	5.55424e-20
NZ_CP029823.1\|WP_099013316.1\|8349692_8349932_+\|chaplin	gnl\|CDD\|367652	pfam03777, DUF320, Small secreted domain (DUF320). Small domain found in a family of secreted streptomyces proteins. It occurs singly or as a pair. Many of the domains have two cysteines that may form a disulphide bridge.	2.76883e-15
NZ_CP029823.1\|WP_069874706.1\|8351066_8351858_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	2.52906e-91
NZ_CP029823.1\|WP_079257139.1\|8354814_8355150_+\|barnase-inhibitor	gnl\|CDD\|376530	pfam01337, Barstar, Barstar (barnase inhibitor).	2.15527e-25
NZ_CP029823.1\|WP_069874685.1\|8351907_8352381_+\|NfeD-family-protein	gnl\|CDD\|224501	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	1.92214e-18
NZ_CP029823.1\|WP_099013323.1\|8337949_8339374_+\|MFS-transporter	gnl\|CDD\|340897	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.04676e-120
NZ_CP029823.1\|WP_099016869.1\|8347762_8348920_+\|GAF-domain-containing-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.68967e-55
NZ_CP029823.1\|WP_099013324.1\|8337137_8337812_-\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	9.81855e-52

>NZ_CP029823.1|WP_099013316.1|8349692_8349932_+|chaplin
MKNIKRFAAITIAAGGLAVAGAGVASAQGPQADGGATMSPGVVAGNNIQAPVHVPVNFCSNTISVIGSMNPAFGVPCGR
>NZ_CP029823.1|WP_099013317.1|8348912_8349554_+|response-regulator-transcription-factor
MADPGRIRVLLVDDHQVVRRGLRTFLQVQDDIEVVGEAADGEEGVARAEELRPDVVLMDVKMPGLDGIEALRALRDLDNPARVLVVTSFTEKRTVVPALRAGAAGYVYKDVDPEALARAIRSVHSGHVLLQPEVALALLSQEEGGGQGRGSLTEREREVLALIADGRSNREIARALVLSEKTVKTHVSNILMKLDLSDRTQAALWAVRHGIGA
>NZ_CP029823.1|WP_099016869.1|8347762_8348920_+|GAF-domain-containing-sensor-histidine-kinase
MTKGRAGGPEAGLSRVSGALLAMSRHLEVRDVLKTIVVSARELLDAEYAALGVPDDHGGFAQFVVDGVSEEQWKAIGPLPRQHGILAAMLKDATPQRLADVRLDARFEGWPSAHPVMSDFLGLPIADGDEVLGAVFLANKRCPKPEGGCGFTAEDEELLSILAQHAAIALTNARLYERSRELTIAGERARLAHELHDAVSQKLFSLRLTAQAAAALVDRDPARAKEELQQIALLAAEAADELRSAVVELRPAALDEDGLVATLRTQVQVLDRAHSAHVTFASRGVRALPAAQEEAVLRVAQEALHNALRHAGARQVDVTLARRGQGARLRVADDGRGFDPSAVRRAGRHLGLVSMRDRAGGVGGGLTVESAPGKGTVIEMEVPGG
>NZ_CP029823.1|WP_099013318.1|8346544_8347315_-|transglycosylase-SLT-domain-containing-protein
MPLPSIPGYNRLTKTHKYSAAGIAAAGAAAIAFAVVPGGDAGAKTTAQDLPNKPVALTSQKADAQAHHEALVKQSALADKQAKEEAAEKKAAAEAAKKKAAEEAAKKKAAEEAAAAKAAEAKAAKERAVKQAASRSAARIETVADTKKTYRDNLDGWIRESLDIMKAKGIPGSYQGIHRNIIRESGGNPRAINLWDINARNGVPSKGLLQVIAPTFKTYHVEGTSWDPYDPVANITAACNYAAARYGSMDNVNGPY
>NZ_CP029823.1|WP_099013319.1|8343768_8346420_+|FHA-domain-containing-protein
MGHGVPELVLELNGQTWTLDPSRSYSLGRDPQGDMVLDDARVSWRHATVRWGGRSWIIEDQGSTNGTYVQGQRIQQVEIGPGSAVHLGNATDGPRLSVSGSGASMGAAGAYGQQGAMGMPQQAQQPQQPPAQQQPQQPGPGGWPQPGGQPPQAQPQGWQQQPQAFIPQQQAPHQQPQQAPPQQQPQAPQGNLAQNVPGAGPSGSSGPAGAAPGQGDRSPTTFHQLAAGRVMRIGRALENDLVVSDLQVSRHHAEFQALPDGRFEIRDLGSHNGTYVNGQPVRQQIIGPSDTVGVGHSTFRLVGDRLEEFVDTGEVSFSARHLTVTVDGGKQILKDVSFGVPEKSLVAVIGPSGSGKSTLLKALTGYRPANQGDVLYDNRNLYKQFAELRQRIGLVPQDDILHKELTVQKALRYAAKLRFPGDTAETEREARIDEVLRELKLDIHREKKVTALSGGQRKRVSVALELLTKPSLIFLDEPTSGLDPGMDRDVMQLLRGLADDGRTVLVVTHSVAELALCDKLLVMAPGGSVAYFGPPDEALNFFGYDSWADVFSAFENYRDYDWAGRWRGSQHYQMYAADLDSVAPQSVHVQAPPTRMQKPQSWGSQLWTLIRRYLSVIGSDRGFMGLMVILPAVLGAVSVVIPAKFGLQFAPKGSFNQAAGTILLILVVGMCFTGAANSVRELIKERVIYERERAVGLSRSAYLMSKVIVLGVITALQGVIICAIGLSTRKLPEEGLLMPPAAELCLAVIAIGFTSMMFGLVISSLVKTAEKTMPLLVMFAIVQVVFTGVLFKIFGSPGVEQFAWLMPSRWAVGAAGATLDLGPGSGHMMAPWDSKQPLDTDPLWEHTTTQWGIDMVALVVLGIVCGFVVARLLRRHEPEVMRK
>NZ_CP029823.1|WP_099013321.1|8340704_8341937_-|phosphoserine-phosphatase-SerB
MSASRIPPVTAVPDDDVPTLLVKIFGKDRPGITAGLCDTLAAYGVHIVDIEQVVTRGRIVLCVLVTAPKADGTEGDLRATVHSWAESMRLQAEIISGRGDNRPRGTGRSHVTVLGNPLTAESTAAIASRITGTGGNIDRIFRLAKYPVTAVEFEVSGAETEPLRTALAIEAADIGVDVAVVASGLQRRAQRLVVMDVDSTLIQDEVIELFAAHAGCQAEVAEVTARAMRGELDFEQSLHARVALLAGIDESVVEKVRAEVRLTPGARTLIRTLKRLGYQVGVVSGGFTQVTDDLKERLGLDFASANTLEIVDGKLTGRVIGEVVDRAGKARLLRRFAAEAGVPLVQTVAIGDGANDLDMLNAAGLGVAFNAKPVVREAAHTAVNVPFLDTVLYLLGVTRDEVEAADAHED
>NZ_CP029823.1|WP_093702244.1|8340012_8340531_+|histidine-phosphatase-family-protein
MSVDVPRRIVLLRHAKADWPQVADHERPLAERGRKDAPIAGRRIAEAGLTPELTLCSTALRTRETWKLVVHELPRRPKTVYEERLYDAPVGQLIEVINETPDDITDLMVLGHNPGMHGLADALAGEADEGAKERMDRGAFPTSAFAVVTFSGSWKSVELGCGRLTSFWAPHE
>NZ_CP029823.1|WP_099013322.1|8339677_8339896_+|hypothetical-protein
MSARTRTRSVHPSVSGVDARLPWWAVALPAVAFGALLLLLTGPTAAHAESGGSGPVSQVVELVHRAFKDAVG
>NZ_CP029823.1|WP_099013323.1|8337949_8339374_+|MFS-transporter
MVGMHTSPSDDLATLDTAASAPSPAEPGGPRRAASPWRGRVMAAGLLLAALNLRPAVTTLGPLLEEVRDGLGMSGTVAGVLTSVPPACFALFGFTAPRLARRWGPGAVVCAGLAAIAAGLLLRPFAGGTVVFLAASALALAGIAVSNVLMPVIVKRWFPDRVGAMTGLYSMGLSLGTAVAAAVTVPMTDALGGSWRAGLGVWALLAAVALVPWLFLARDRTSGAESGPEANGPGANGPVASASDAGGSETGGGTGTRTGTDTDTGAPAAVAETAAAPADGPAIRIARSPLAWAMAVFFGFQATAAYISMGWMPQIFRDAGVSASTSGLLLAVMMAMGVPLAFVLPRIAARLRHQGVLVVILGVLGLIGYGGLWLAPAEGAWLWALLLGVANCAFPLALTMIGMRTRTHAGVVRLSAFAQSVGYLLSIPGPLLVGVLYQHSGGWGQPLALMAGFMVPQIVAGVLAGRDRTLEDEG
>NZ_CP029823.1|WP_099013324.1|8337137_8337812_-|FadR-family-transcriptional-regulator
MPLTSPRRSALADQVIAQLRAQITSGEWPVGSRIPTEPELVEQLGVARNTVREAVRALAHNGLLDIRQGSGTYVLATSELAGVMHRRFAAADPRHVAELRSALETKAARLAAERRTEQDLKQLDAQLDRRERAWEGGDPDAFVEADATLHMAVVAASHNDVLEELYADLGAVVRDFLRADVGGGMGPDAYVDHGRLVEAIREGDGERAAAEASTHPFGCRFGGC
>NZ_CP029823.1|WP_069874683.1|8350152_8350956_-|hypothetical-protein
MLDEPRSGRLAAWGNALLAGLVSPDEAAHRIADEDASHRVAGLPGESGPVGLTLALGRLRALGAKGLRVALPIAGHPLGLSGPPEFNAQALDAGEAVIATGAALGLVPEVSAVGPEGDQHVEVVWRCQGVREAPPADVPSLSEAERELAEALREATEVLSRLNVAGSGPVAQAALDAYRARAERGREVLAPGYPPRALRVLELAQRVGALVDIAYTAGGDGREHGGAVSASEITARAEALRPVERTSRRAQVAAYNAYVEERERGGL
>NZ_CP029823.1|WP_069874706.1|8351066_8351858_+|ABC-transporter-ATP-binding-protein
MSEVLELLDVSVVRDGRALVDEVSWSIKEGERWVILGPNGAGKTTLLNLASSYLFPSAGSARILGEHLGRVDVFELRPRIGVAGIAMAEKLPRSQTVLQTVLTAAYGMTAHWQEDYDAVDETRARAFLDRLGMTEYLNRKFGTLSEGERKRTLIARAMMTDPELLLLDEPAAGLDLGGREDLVRRLGRLARDPLAPSMIMVTHHVEEIPPGFTHVLMIRQGKVLTAGPVETELTSRNLSRCFGLPLVVERNGDRWTAQGLPLT
>NZ_CP029823.1|WP_069874685.1|8351907_8352381_+|NfeD-family-protein
MIRALSPTTGANYHDHVDPWVWWLIAAVGLGIPLVLTAMPEFGMVAVGAVAGAITDALGGGIVLQVVVFCVVSVALVAVVRPMAVRSRRQQPELRSGIEALKGRQAVVLERVDHGGGGRIKLAGEIWSARSLDPGQSYEPGQQVDVVEIDGATAVVM
>NZ_CP029823.1|WP_069874688.1|8352533_8353493_+|SPFH/Band-7/PHB-domain-protein
MEPIIIVLIILVVLVFIALIKTIQVIPQASAAIVERFGRYTRTLNAGLNIVVPFIDSIRNRVDLREQVVPFPPQPVITQDNLVVNIDTVIYYQVTDARAATYEVASYIQAIEQLTVTTLRNIIGGMDLERTLTSREEINAALRGVLDEATGKWGIRVNRVELKAIEPPTSIQDSMEKQMRADRDKRAAILQAEGVRQSEILRAEGEKQSAILRAEGESKAAALRAEGEAQAIRTVFESIHAGDPDQKLLSYQYLQMLPKIAEGDANKLWIVPSEIGDALKGLGGAMGNFGPLTGGGNGGGTPAATGKEPAPRREQPRID
>NZ_CP029823.1|WP_069874708.1|8353588_8354092_-|HNH-endonuclease
MRETLVLNASFEPLATVTLRRAVVLVLQDKAVVEHAHPGLRVRAADVDLPLPRVIRLCRYVRVPFRRRAPWSRRGVLVRDQHRCAYCGRRATTVDHVVPRSRGGGDTWLNTVASCAEDNHRKADRTPEQAGMRLLKAPFEPTPSDALVLALGAAERDGLPEWLALPA
>NZ_CP029823.1|WP_099013315.1|8354197_8354737_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MSEQNRPPLPHDFHPPVPSFTVVSDDVEPGGTLNSAQVYAEGNTSPQLRWEGFPDGTKSFAVTCYDPDAPTGSGFWHWVLFDIPATVTELPAGAGSGGFAGLPDGAVQARNDYGTRDFGGAAPPPGDGSHRYVFTVYAVDSEKLGPDADASPAVVGFNLRFHTLGRAQLIGEYEAPAAG
>NZ_CP029823.1|WP_079257139.1|8354814_8355150_+|barnase-inhibitor
MSPMTGPTLALHLRLDGVTDKDGFLDRCARDLRFPHWYGRNWDALADCVTDLSWWAEGREPSGCLLDIQGWPAFRDADPDAAAIAADILADAEAYWATQGRPLVVRYDDGP
>NZ_CP029823.1|WP_069874695.1|8355306_8356089_-|sporulation-protein
MGFKKLLASLGAGGASVETVLTEENVVPGGIVQGEVRIQGGSVAQRIEGLSVGLQARVEVEGNDQEYKQDVEFTRQQLGGAFEVQPGAVHAVQFGLEIPWETPITMFLGRHLSGMNVGVTTELAIARAVDSGDLDPVHVHPLPAQQAILDAFGTLGFRFKSADLERGHIRGTRQRLPFYQEIEFYAPEQYRGLNQVELSFVADDREMDVVLEMDKKPGLFTEGSDTYRSFTMNLASFQDTDWAAYLNQWLAQVGGKRNWF
>NZ_CP029823.1|WP_069874698.1|8356257_8356920_+|DNA-3-methyladenine-glycosylase
MTAGPDREPLDRSFFDRPVLEVAPDLLGRVLVRSTPDGPIELRLTEVEAYAGPADPGSHAYRGRTERNAVMFGPPGHAYVYFTYGMWHCLNLVCGPEGHPSGVLLRAGEVLHGHARAHQRRPKARNDHELAKGPARLATALGVDRRLDGTDVCAGPDAALAILTGHPARPAQVLSGPRTGVGGEGATHPWRFWIDGEPSVSPYRAHTPRRRNSTRRQVGT
>NZ_CP029823.1|WP_099013314.1|8357087_8357336_-|hypothetical-protein
MDGVSTYLALTFGTLLSSQGTDASFETVSPASPGASLRCFQPYQIRFPVRFRSEFRFRPPAGAGSFAPSGVSTTLANFPLSS

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Crispr_ID: NZ_CP029823_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_14

8692729-8692835

Orphan

Consensus_repeat	Method
AACGCCCCCGGGCGCGCGTGGACCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP029823_14

>merge|NZ_CP029823|14|8692729-8692835|CRISPRCasFinder
AACGCCCCCGGGCGCGCGTGGACCGCCCCCGGGCGCGCGCGAACCGGCGGGTGGCCATGGGTTTCCTTCCGAGGTGATGGGCAACGCCCCCGGGCGCGCGCGGACCG

>NZ_CP029823|14|12|8692729-8692835|CRISPRCasFinder
AACGCCCCCGGGCGCGCGTGGACCG	CCCCCGGGCGCGCGCGAACCGGCGGGTGGCCATGGGTTTCCTTCCGAGGTGATGGGC
AACGCCCCCGGGCGCGCGCGGACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_069869006.1\|8690365_8691415_+\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274647
NZ_CP029823.1\|WP_079257036.1\|8685656_8686331_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099013154.1\|8696492_8697722_+\|cysteine--1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside-ligase	unknown	unknown	gnl\|CDD\|183518
NZ_CP029823.1\|WP_099013151.1\|8700630_8701407_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP029823.1\|WP_099013149.1\|8702567_8704163_+\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP029823.1\|WP_099013150.1\|8701530_8702565_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380478
NZ_CP029823.1\|WP_069869001.1\|8682650_8683988_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|181163
NZ_CP029823.1\|WP_099013156.1\|8684315_8685209_+\|chaplin	unknown	unknown	gnl\|CDD\|367652
NZ_CP029823.1\|WP_099013152.1\|8699206_8700634_+\|fuconate-dehydratase	unknown	unknown	gnl\|CDD\|239440
NZ_CP029823.1\|WP_069869007.1\|8692849_8693842_-\|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213364
NZ_CP029823.1\|WP_093702684.1\|8693940_8694636_+\|MSMEG_4193-family-putative-phosphomutase	unknown	unknown	gnl\|CDD\|163560
NZ_CP029823.1\|WP_069869009.1\|8694759_8695350_+\|DUF3090-domain-containing-protein	unknown	unknown	gnl\|CDD\|213872
NZ_CP029823.1\|WP_099013157.1\|8680683_8682369_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|238206
NZ_CP029823.1\|WP_069869005.1\|8689257_8690238_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381313
NZ_CP029823.1\|WP_014059547.1\|8685420_8685609_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099013158.1\|8679406_8680348_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|334588
NZ_CP029823.1\|WP_099016850.1\|8691912_8692719_+\|ferritin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|153097
NZ_CP029823.1\|WP_099013155.1\|8695448_8696297_+\|SCO1664-family-protein	unknown	unknown	gnl\|CDD\|274813
NZ_CP029823.1\|WP_099013153.1\|8697839_8698988_-\|PAC2-family-protein	unknown	unknown	gnl\|CDD\|378251
NZ_CP029823.1\|WP_142881464.1\|8688581_8688896_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_069869006.1\|8690365_8691415_+\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274647	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family. Members of this protein family are predicted to be oxidoreductases dependent on coenzyme F420. The family includes a single member in Mycobacterium tuberculosis (Rv3520c/MT3621) but four in Mycobacterium smegmatis. Prediction that this family is F420-dependent is based primarily on Partial Phylogenetic Profiling vs. F420 biosynthesis. [Unknown function, Enzymes of unknown specificity].	1.45431e-136
NZ_CP029823.1\|WP_099013154.1\|8696492_8697722_+\|cysteine--1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside-ligase	gnl\|CDD\|183518	PRK12418, PRK12418, cysteinyl-tRNA synthetase; Provisional.	0
NZ_CP029823.1\|WP_099013151.1\|8700630_8701407_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	3.8793e-58
NZ_CP029823.1\|WP_099013150.1\|8701530_8702565_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380478	cd01536, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of active transport systems that are members of the type 1 periplasmic binding protein (PBP1) superfamily. Periplasmic sugar-binding domain of active transport systems that are members of the type 1 periplasmic binding protein (PBP1) superfamily. The members of this family function as the primary receptors for chemotaxis and transport of many sugar based solutes in bacteria and archaea. The sugar binding domain is also homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR. Moreover, this periplasmic binding domain, also known as Venus flytrap domain, undergoes transition from an open to a closed conformational state upon the binding of ligands such as lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars. This family also includes the periplasmic binding domain of autoinducer-2 (AI-2) receptors such as LsrB and LuxP which are highly homologous to periplasmic pentose/hexose sugar-binding proteins.	2.53387e-55
NZ_CP029823.1\|WP_069869001.1\|8682650_8683988_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|181163	PRK07906, PRK07906, hypothetical protein; Provisional.	0
NZ_CP029823.1\|WP_099013156.1\|8684315_8685209_+\|chaplin	gnl\|CDD\|367652	pfam03777, DUF320, Small secreted domain (DUF320). Small domain found in a family of secreted streptomyces proteins. It occurs singly or as a pair. Many of the domains have two cysteines that may form a disulphide bridge.	1.9579e-13
NZ_CP029823.1\|WP_099013152.1\|8699206_8700634_+\|fuconate-dehydratase	gnl\|CDD\|239440	cd03324, rTSbeta_L-fuconate_dehydratase, Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA. rTS beta expression is associated with the production of small molecules that appear to mediate the down-regulation of thymidylate synthase protein by a novel intercellular signaling mechanism. A member of this family, from Xanthomonas, has been characterized to be a L-fuconate dehydratase. rTS beta belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	0
NZ_CP029823.1\|WP_069869007.1\|8692849_8693842_-\|magnesium/cobalt-transporter-CorA	gnl\|CDD\|213364	cd12830, MtCorA-like, Mycobacterium tuberculosis CorA-like subfamily. This bacterial subfamily belongs to the Thermotoga maritima CorA (TmCorA)-like family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subfamily includes the Mg2+ transporter Mycobacterium tuberculosis CorA (which also transports Co2+). Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.71747e-165
NZ_CP029823.1\|WP_093702684.1\|8693940_8694636_+\|MSMEG_4193-family-putative-phosphomutase	gnl\|CDD\|163560	TIGR03848, MSMEG_4193, probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.	6.8716e-112
NZ_CP029823.1\|WP_069869009.1\|8694759_8695350_+\|DUF3090-domain-containing-protein	gnl\|CDD\|213872	TIGR03847, TIGR03847, conserved hypothetical protein. The conserved hypothetical protein described here occurs as part of the trio of uncharacterized proteins common in the Actinobacteria.	3.83161e-88
NZ_CP029823.1\|WP_099013157.1\|8680683_8682369_+\|recombinase-family-protein	gnl\|CDD\|238206	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain. These enzymes perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase. Serine recombinases demonstrate functional versatility and include resolvases, invertases, integrases, and transposases. Resolvases and invertases (i.e. Tn3, gamma-delta, Tn5044 resolvases, Gin and Hin invertases) in this family contain a C-terminal DNA binding domain and comprise a major phylogenic group. Also included are phage- and bacterial-encoded recombinases such as phiC31 integrase, SpoIVCA excisionase, and Tn4451 TnpX transposase. These integrases and transposases have larger C-terminal domains compared to resolvases/invertases and are referred to as large serine recombinases. Also belonging to this family are proteins with N-terminal DNA binding domains similar to IS607- and IS1535-transposases from Helicobacter and Mycobacterium.	2.74991e-18
NZ_CP029823.1\|WP_069869005.1\|8689257_8690238_-\|aldo/keto-reductase	gnl\|CDD\|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	3.28073e-104
NZ_CP029823.1\|WP_099013149.1\|8702567_8704163_+\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP029823.1\|WP_099013158.1\|8679406_8680348_+\|RNA-methyltransferase	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	5.18867e-13
NZ_CP029823.1\|WP_099016850.1\|8691912_8692719_+\|ferritin-like-domain-containing-protein	gnl\|CDD\|153097	cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyubiquinone hydroxylases (DMQH), DNA protecting proteins (DPS), and ubiquinol oxidases (AOX), and the aerobic cyclase system, Fe-containing subunit (ACSF).	0.000947112
NZ_CP029823.1\|WP_099013153.1\|8697839_8698988_-\|PAC2-family-protein	gnl\|CDD\|378251	pfam09754, PAC2, PAC2 family. This PAC2 (Proteasome assembly chaperone) family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 247 and 307 amino acids in length. These proteins function as a chaperone for the 26S proteasome. The 26S proteasome mediates ubiquitin-dependent proteolysis in eukaryotic cells. A number of studies including very recent ones have revealed that assembly of its 20S catalytic core particle is an ordered process that involves several conserved proteasome assembly chaperones (PACs). Two heterodimeric chaperones, PAC1-PAC2 and PAC3-PAC4, promote the assembly of rings composed of seven alpha subunits.	2.31637e-51
NZ_CP029823.1\|WP_099013155.1\|8695448_8696297_+\|SCO1664-family-protein	gnl\|CDD\|274813	TIGR03843, Phosphatidylinositol_3-_and_4-kinase, conserved hypothetical protein. This model represents a protein family largely restricted to the Actinobacteria (high-GC Gram-positives), although it is also found in the Chloroflexi. Distant similarity to the phosphatidylinositol 3- and 4-kinase is suggested by the matching of some members to pfam00454.	2.95869e-120

>NZ_CP029823.1|WP_099016850.1|8691912_8692719_+|ferritin-like-domain-containing-protein
MLSAKSVFQEILDNDESFRLFCSVAASGEAQGGWENGRIAALVPESRRDLAPKIARHGIDEDKHGRIFNALLRKRGLEPMEVPRETDYTMLLEARGIGLAHDKLRRDEPLTDHDIVIYLAHSRVTEQRAAAQMTMLCRYFGDHPDLGRAVRMIADDEDNHLAYCHEELLRMAAAGYGRTIQRTLRESALVEMGVYRDVSLAVMARMGRVLGWSRAKSAPLAAGIRALYAYERLGGWRRMVSLRMPERRNALGGPEQSASGAPEAPELV
>NZ_CP029823.1|WP_069869006.1|8690365_8691415_+|LLM-class-F420-dependent-oxidoreductase
MRLGINLGYWGAGMDADNLAVAREADRLGYAVCWAAEAYGSDAATVLAWVAAQTERIDVGSAIFQIPARTPAMTAMTAATLDTLSGGRFRLGLGVSGPQVSEGWYGVRFDKPLARTREYVEIIRKAMSRERLSHEGQNWTLPLPDGPGKPLKLTVHPVREYIPLYIAAIGPKNLEQTGEIADGALVLFYAPEHAEATTLGSLRAGRAKVGKDLEGFDVVPTVPMALGDDVRALADQFRPYTALYVGGMGSAKQNFYNKLAQRLGYEKEAAEIQEKYLSGDKEGAAAAVPHDLIDSTALLGPVERIADRMQAYAEAGVTTLSLTPSGFTLEERLAGLRAGVEALERAGLA
>NZ_CP029823.1|WP_069869005.1|8689257_8690238_-|aldo/keto-reductase
MELRHLGRTGLRVSRLGLGTLTWGRDTDEHDAADQIKAFWEAGGTLVDTADVYADGGAEYLLGQLLEGLLPRRDLQIATKAGSVPDPDRRFDTSRGHLLAALDASLERLGTDYVDLWQVHAFDPFTPIEETLQALDIAVSSGRARYVGVSNFSGWQLAKAATWQLASSGAHTRLASTQMEYSLLQRGVEREVLPAALDLGVGLLPSSPLGRGVLTGKYRHTTPADSRGASELAAFVAPYLDEEASRIVEAVAIAADGLATTALNVALAWVRDRPGVTAPIVGARNAQQLRAALSAESLSLPDEICQALDDVSAPVHRYPDQDWSTL
>NZ_CP029823.1|WP_142881464.1|8688581_8688896_+|hypothetical-protein
MRGAAPPDAVPGVVEERRRRPLAALHGPHGRGQRLGRRRPPPLPTLNAAGARLGGGLGVARLTWCGRRGTTGAHAGARLGRVLFRVSGAARIHPWAAGCAAVPG
>NZ_CP029823.1|WP_079257036.1|8685656_8686331_+|hypothetical-protein
MSDAAQPSAAEVRAAAEAVKAALDRHLDAVERRSGEGDPAVYAAFNELAAAAEVYDELLYDAYDEVTPFEIPGDDRLPAYAGPEEPSALSVLIRRDYVVAEPQRLLSQAQRIADLDPDIDTGNGREGGGAAAGESVHTALGVVFGEFEPDEIASRHKEFGLEEGDSTLWVVAAEEPPEPGEWLSAPFDQADPHMVVCRFDMSSVFDEELEDEDEDDLEVLEPGS
>NZ_CP029823.1|WP_014059547.1|8685420_8685609_-|hypothetical-protein
MPEYEFCDVYVPRGVSRKATTRLLTDHAEYGHWELDRLRLNPDGSRRVRLRRRIIRQLRATW
>NZ_CP029823.1|WP_099013156.1|8684315_8685209_+|chaplin
MRQVAKKGLITVAAASGVLAVTGGYAQAAGSGADGGAMYSPGIVSGNNIQAPVHVPVNLCGNTVSVIGVLNGAGGGQCGGGSGDSSGGGAQSGGSQAQGVASGSSGIGSGNNIQAPIGVPVNVCGNNISAVGFGNSSDGGECGETVPAVPENPSEPGEPGEPGNPGEPGNPGEPGEPGNPGNPGQPGNPGNPGNPGNPGEPGNPGNPGNPGNPGQPGNPGNPGGSNPGGGSNQPGHSSPGHQTEHTGVHGVDPSANLGGKEQLAQTGAGPVALAIPAAAGMLLAGTVLYRRARAAQH
>NZ_CP029823.1|WP_069869001.1|8682650_8683988_+|M20/M25/M40-family-metallo-hydrolase
MSESLSGATTTGTVRGEDEVVDLCRDLIRIDTSNYGDHSGPGERAAAEYVAEKLAEVGLEPKIFESHKGRASTVARIEGEDPSRPALLIHGHTDVVPANAEDWTHHPFSGEIADDCVWGRGAVDMKDMDAMTLAVVRDRLRSGRKPPRDIVLAFLADEEAGGVYGARHLVDNHPGLFEGVTEAIGEVGGFSFTVNEQLRLYLIETAQKGMHWMRLTVDGTAGHGSMTNNDNAITELSEAVGRLGRHKFPVRVTKTVRSFLDELSDALGTPLDPENMDETLAKLGGIAKIIGATLQNTAAPTMLNAGYKVNVIPGQATAHVDGRFLPGLEDEFLADLDRILGPRVKREDVHADKALETSFDGALVDAMQSALKAEDPIARAVPYCLSGGTDAKSFDDLGIRCFGFAPLRLPPELDFAGMFHGVDERVPVDGLKFGVRVLDRFLDAC
>NZ_CP029823.1|WP_099013157.1|8680683_8682369_+|recombinase-family-protein
MPRFAFAGRCSTEDLQDPETSRNWQLTRARALIEPAGGEIVAEYFDSGHSRALPWKRRPQAAALLTALRDPHRGFDAVVIGEPQRTFYGNQFGNTFPLFTHFNVPLWVPEIGGPIDPDNEAHDLVMSVFGGMSKGERNRIKIRVRTAMGSQAKIEGRFLGGRPPYGYRLTDAGPHPNPAKAADGKRLHRLEPDPDTAWVVVRTFTEYLEGKGYYAIAEGLTRDGIPCPSAYDRDRNRHRKGHAWCKGAVRAILVNPRYTGHEVWSKQRKDEVLLDIDDVTLGHRTKMAWNTPEQWIWSAQPVHQPLISPTTFAHAQAKRHARSTQTHLERKPRPTTRGYALRGLIRCAICQRKMQGTFNNGKPHYRCRYNAEYAKNAALDHPLTVYVREEVILPELDKWIAKAFAPGQLTATLQAMRQAQSAESPTTTAAAAARRTMAECDRRIVQYRAALDAGTDPKLATEWINQAQSEKASARQDLLTATAIQPEILTEDQIKHMVSGLGSMTDRLLTTASEHKRPLYESFGLALTLDMQKRVVIVESQPAHTCTYGKCPRGDLNPHAR
>NZ_CP029823.1|WP_099013158.1|8679406_8680348_+|RNA-methyltransferase
MSDRESVWNTAPTSAHAQRADRYVSGSNAHPAKMLPAIAAHAIRTYTKPGELVLDPMCGIGTTLVEAIHHRRHALGIEYESRWARIARANIAHNIRHVEQCSGRVVCGDARQLTQLIDADLHGKVALVVTSPPYGPSAHGRVHCTSETGERGVVKTDYRYGRDPHNLAHVSTDQLLDGFSKILTQCRTVLRPGGTVVVTTRPWRTHGELIDLPSAVLATGQAAGLVPTERCVALLAGIRDGRLIARPSFFQLKNVRDARRQGIPLHLVQHEDVLIFTRPEKPSAMSQPLCTRHERQAGTSRCGYPRSHRKTRL
>NZ_CP029823.1|WP_069869007.1|8692849_8693842_-|magnesium/cobalt-transporter-CorA
MRSVIVDCAIYRDGCRTEGPADFSDALDEARARGDAFLWIGLHEPTEKEFELVTSEFGLHPLAVEDALGAHQRPKLEVYDDSLFLVLKPVQYDDKAGTVTTGELMVFVGDSFVVTVRHGEANPLGSVRDRLEKMPEVLQHGPTAVMYAVSDAVVDHYLDVADDLHGDLEVLETEVFAPNAGGGQNTAGRIYAFKREVMEFRRSAGPLAEPMERLTGAGVPFVHEGSRPFFRDVSDHLTRVNEHVEGLDRLLSDILSAHLAQMGVRQNDDMRKISAWAAMAAVPTMIAGIYGMNFTHMPELEQPWGYPGVIVLMGGVIALLYRYFKRRGWL
>NZ_CP029823.1|WP_093702684.1|8693940_8694636_+|MSMEG_4193-family-putative-phosphomutase
MPMLILVRHGRSTANTAGVLAGWTPGVALDERGTAQAAALPDRLARLPLAAAVTSPLQRCRETLAPLLAARPELPLHPDDRIGECHYGDWSGRKLAELADEPLMNIVQQHPSAAAFPGGESLRAMNARAVEAVRDWNARIEREHGADAAYLMCSHGDIIKALVADALGLHLDLFQRISVEPCSITAIRYTPTRPFLVRLGDTGDFAGLAPREETTGDRGGDAAVGGDAGAP
>NZ_CP029823.1|WP_069869009.1|8694759_8695350_+|DUF3090-domain-containing-protein
MSRQVFLYDPPDRFVAGTVGLPGRRTFFLQASAGSRTTSVALEKTQVAALAERIDELLDEVVRRTGGNAPVPAVAPTELSDTAPLEAPVEEEFRVGTMALAWDGEEQRMIVEAQALVELEAESEEDLAEAEERLLQDDVNGPPMLRVRLTGTQARAFAKRALEVVNAGRPPCPLCSLPLDPEGHVCPRQNGYRRGA
>NZ_CP029823.1|WP_099013155.1|8695448_8696297_+|SCO1664-family-protein
MAPSELLALGELTVRGRVREASNAVLYCTVEYEGHSAPCVYKPVAGERPLWDFPDGTLAQREVAAYEISEATGWGLVPPTVLRDGPYGQGMCQLWIEVEVTTGAADGDADGADGDGSGEAGGGELLALVEGDEPGPGWKAVGYAEVGEGRTALLVHADDVRLRRLAVLDAVINNGDRKGGHLLPAAGGRLYAIDHGVTFNADDKLRTLLWGWAGDPLPDDVLEVLRGLADQLADGGPLSARLAKLITEAEIEALRARVATLLRTGTHPEPSGQWPAIPWPPV
>NZ_CP029823.1|WP_099013154.1|8696492_8697722_+|cysteine--1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside-ligase
MYAWPASEVPALPGSGRDLSIHDTATGGRITLTPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVWLDTKRQVHYVQNVTDVDDPLLERAQENGDDWTALAERETALFREDMTALRMLPPRHYIGAVEAIPGIVPLVERLRDLGAAYELEGDVYFSVESDPSFGSVSRLDAEAMRLLSAERGGDPERPGKKNPLDPMLWMAARAGEPSWDGGSLGSGRPGWHIECVAIALDHLGMGFDVQGGGSDLAFPHHEMGASHAQVLTGERPFAKTYVHAGMVALDGEKMSKSKGNLVFVSALRRDGVDPAAIRLALLAHHYRSDWEWTDEVLREAEERLGRWRAAVSRPDGLPADALVEEIRKALADDLDSPAALAAVDRWAAAQTATGGTDEGAPGLVSRAVDALLGVAL
>NZ_CP029823.1|WP_099013153.1|8697839_8698988_-|PAC2-family-protein
MIELEGVPELIDPVMICAFEGWNDAGDAASTAVGHLDREWKGEVFASLDAEDYYDFQVNRPTVALEGGVRKITWPTTRLSVVRADTGEQSRDLVLVRGIEPSMRWRSFCNEILGYAHELGVEMVVILGALLGDTPHTRPVPVSGVTSDPDLARSLDLEETRYEGPTGIVGVLQEACAHAGVPAVSLWAAVPHYVSQPPNPKATLALLNRLEDLIGVRIPLGELTEDSRAWQLGVDQLAAEDSEVAEYVQSLEEARDTAELPEASGEAIAREFERYLRRRDGQPGPGGHATESGGLAEGREGGTSGGPGTPYLRDPSTGHGRPRKPSARDEMAKDDAEDTGGAEDETKGPDDAQEGEGQDASHREDGGTDRGGDGDEGSGSGR
>NZ_CP029823.1|WP_099013152.1|8699206_8700634_+|fuconate-dehydratase
MFSLAHRFREPPLSQRPSVTELEVHDIRFPTSEQLDGSDAMNPDPDYSAAYVVLRTDAGEGPAAEGHGFVFTIGRGNDVTAAAIRSLLPHVVGRPAPLTAADLAALHRELTHDSQLRWLGPEKGVMHMAAGAVVNAAWDLAARQAGKPLWRFLADMSPEELVGLVDFRYLSDALTRDEALAILRAAEPGRAERAALLRERGYPAYTTSPGWLGYSDEKMIKLAQEAVAEGFGQIKLKVGGDLDEDLRRMRLAREAVGPDVRIAVDANQRWDVAEAVRWMSALAPYDPHWIEEPTSPDDILAHAAIRAGQPVKVATGEHVANRVVFKQLLQAEAVDFVQIDAARVAGVNENLAILLLAAKYGLPVCPHAGGVGLCELVQHLAMFDFVAVSGSWEDRVIEYVDHLHEHFADPVVIESGRYRAPTAPGFSARMYPESIAAYRYPDGPEWRARIARPVPAPSASAPAPFTPAQPQEDHQ
>NZ_CP029823.1|WP_099013151.1|8700630_8701407_+|SDR-family-oxidoreductase
MTTGDFEGLAALVTGGASGIGAAIATTLRDRGARVAVLDRDPSGVPDGTLPLKADVTSDEAIRGAVAAAVAEFGALHTVVGNAGIGAIGSVEDNSDEEWHRLLDINVLGLVRTARAALPHLRAAAADRPGAVSITHTCSIAATAGLPQRAAYSASKGAVLSLTLAMAADHIREGVRVNCVNPGTVDTPWVGRLLGQAPDPAAERAALEARQPTGRLVSADEVAAAVAYLASPAAAAVTGTALAVDGGMQGLRPRPASS
>NZ_CP029823.1|WP_099013150.1|8701530_8702565_+|sugar-ABC-transporter-substrate-binding-protein
MTRLRTTGTAACAVLLAVAALTGCNRESNGAGGGKVGIDMPRTDTDFWNSYQQYLEKGIDKGTVSALPLSNSQNDISKLVANVQAFTDQGAKAIVMAPQDTGAISSTLEQLAEKKIPVVSVDTRPDSGKVYMVVRADNRAYGTKACEYLGEKLGGKGRVAELQGDLSSINGRDRSQAFASCMKKKYPGIKVHELPTDWKGDVASAKLQSLLAQHKDVNGIYMQAGGAFLQPTLALLEQKRLLKPAGSDKHITIISNDGIPEELDAIRSGKIDATLSQPADLYAQWALNYAKAALDGKSFKPGPTDHGSTIVKIENGLEDQLPAPLVTKENVDDKKLWANQLEKK
>NZ_CP029823.1|WP_099013149.1|8702567_8704163_+|sugar-ABC-transporter-ATP-binding-protein
MPAVDQPAVVRAQGIVKRFGPTVALDRARLAVRPGEAHALVGRNGAGKSTLVSVLTGMERPDEGEVTFGDEPAPGYGDTAAWQRKVACVYQKSMVVPDLTVAENLYLNRFPGAGRIRWRALRADARALLAEYGVEVDPQTRAKDLSVEQRQFVEIARALSFGARLIILDEPTAQLDAGGIDRLFAKLLELRRQGVAFLFISHHLQEVYELCDTVTVFRDARHVLTAPVAGLAKEDLVAAMTGDGGGAPGGDSGAAVHAPVARKAADPEGEPVLRTEGLALEGEFDPLDLVVRPGEVLGLAGATASGNTAVGETLVGLRKPAGGRLSVRGRPVRPGSVPHAIDAGIGYVPEDRHHQGLVLGRSVAENATLTVTDQLGPYGTVLPSRTRAFAQRMINSLDIKTSGPSQPVSGLSGGNQQKVVIARALAREPSVLVAIRPTAGVDVKSKDALLGVVREVAEAGSGAVIVSDELDDLRVCDRILAFFHGRVVAEFGGGWSDRQLVAAMEGITEPGTTGADGTAEDTEDRTEGRQP

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Crispr_ID: NZ_CP029823_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP029823_15

9583967-9584133

Orphan

Consensus_repeat	Method
CTCGGACTCGGCCGCGGGCCCGG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP029823_15

>merge|NZ_CP029823|15|9583967-9584133|CRISPRCasFinder
CTCGGACTCGGCCGCGGGCCCGGCCTTGGCGGCGGACTCGGCCTTGGTCGCGAGCGCAGGCTCGGTGACGGACTCGGTCTCGGCCGCGGGCCCGGGCTCGGTGGCGGGCCCGGACGTGGCCGTGTGCTCGGACGAGGTGGTCGGCCCCGGCTTCGCCGCGGGCCCGG

>NZ_CP029823|15|13|9583967-9584133|CRISPRCasFinder
CTCGGACTCGGCCGCGGGCCCGG	CCTTGGCGGCGGACTCGGC
CTTGGTCGCGAGCGCAGGCTCGG	TGACGGACTCGGTCTCGGCCGCGGG
CCCGGGCTCGGTGGCGGGCCCGG	ACGTGGCCGTGTGCTCGGACGAGGTGGTCGG
CCCCGGCTTCGCCGCGGGCCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029823.1\|WP_099012758.1\|9586915_9587212_+\|SHOCT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378276
NZ_CP029823.1\|WP_069871282.1\|9576596_9577802_+\|geranylgeranyl-reductase-family-protein	unknown	unknown	gnl\|CDD\|273936
NZ_CP029823.1\|WP_079256595.1\|9571832_9572747_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP029823.1\|WP_069871304.1\|9588383_9588719_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_069871309.1\|9590565_9591411_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP029823.1\|WP_099012762.1\|9582554_9583289_-\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	unknown	unknown	gnl\|CDD\|274422
NZ_CP029823.1\|WP_099012763.1\|9581976_9582486_-\|DUF4442-domain-containing-protein	unknown	unknown	gnl\|CDD\|373120
NZ_CP029823.1\|WP_142881481.1\|9587481_9588198_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP029823.1\|WP_069871306.1\|9588898_9590020_+\|PLP-dependent-cysteine-synthase-family-protein	unknown	unknown	gnl\|CDD\|223110
NZ_CP029823.1\|WP_099012760.1\|9584784_9586014_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP029823.1\|WP_099012765.1\|9575065_9576427_-\|dipeptidase	unknown	unknown	gnl\|CDD\|236127
NZ_CP029823.1\|WP_079260325.1\|9580119_9580785_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP029823.1\|WP_079256585.1\|9590067_9590541_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP029823.1\|WP_079256594.1\|9572743_9573661_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP029823.1\|WP_069871289.1\|9581727_9581970_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP029823.1\|WP_099012759.1\|9586107_9586695_-\|DUF4865-family-protein	unknown	unknown	gnl\|CDD\|379781
NZ_CP029823.1\|WP_069871277.1\|9573892_9574927_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|239217
NZ_CP029823.1\|WP_099012756.1\|9591547_9593995_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378390
NZ_CP029823.1\|WP_099012764.1\|9580819_9581728_-\|DUF2797-domain-containing-protein	unknown	unknown	gnl\|CDD\|378524
NZ_CP029823.1\|WP_099012755.1\|9593964_9596403_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|163057

Protein	Function_ID	Function_description	E-value
NZ_CP029823.1\|WP_099012758.1\|9586915_9587212_+\|SHOCT-domain-containing-protein	gnl\|CDD\|378276	pfam09851, SHOCT, Short C-terminal domain.	0.000218891
NZ_CP029823.1\|WP_069871306.1\|9588898_9590020_+\|PLP-dependent-cysteine-synthase-family-protein	gnl\|CDD\|223110	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism].	7.30616e-93
NZ_CP029823.1\|WP_079256595.1\|9571832_9572747_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.97134e-64
NZ_CP029823.1\|WP_099012755.1\|9593964_9596403_-\|AAA-family-ATPase	gnl\|CDD\|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	8.48222e-92
NZ_CP029823.1\|WP_069871309.1\|9590565_9591411_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	7.09932e-76
NZ_CP029823.1\|WP_099012762.1\|9582554_9583289_-\|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme	gnl\|CDD\|274422	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083. This protein family pulls together several groups of proteins, each very different from the others. They share in common three conserved regions. The first is a region of about 38 amino acids, nearly always at the N-terminus of a protein. This region has a bulky hydrophobic residue, usually Trp, at position 29, and a His residue at position 37 that is invariant, so far, in over 150 instances. The second conserved region has a motif [DE]xxxHxxD. The third conserved region contains a hydrophobic patch and a well-conserved Arg residue. Most examples are found in the Actinobacteria, including the genera Mycobacterium, Corynebacterium, Streptomyces, Nocardia, Frankia, etc. The pattern of near-invariant residues against a backdrop of extreme sequence divergence suggests enzymatic activity and conservation of active site residues.	2.12662e-17
NZ_CP029823.1\|WP_079256594.1\|9572743_9573661_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.5105e-76
NZ_CP029823.1\|WP_142881481.1\|9587481_9588198_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	1.15925e-17
NZ_CP029823.1\|WP_099012760.1\|9584784_9586014_+\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	6.58684e-34
NZ_CP029823.1\|WP_099012765.1\|9575065_9576427_-\|dipeptidase	gnl\|CDD\|236127	PRK07907, PRK07907, hypothetical protein; Provisional.	0
NZ_CP029823.1\|WP_079260325.1\|9580119_9580785_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.24868e-67
NZ_CP029823.1\|WP_099012763.1\|9581976_9582486_-\|DUF4442-domain-containing-protein	gnl\|CDD\|373120	pfam14539, DUF4442, Domain of unknown function (DUF4442). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 139 and 165 amino acids in length. There is a conserved PYF sequence motif. There is a single completely conserved residue N that may be functionally important.	3.81186e-18
NZ_CP029823.1\|WP_079256585.1\|9590067_9590541_-\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	7.02809e-20
NZ_CP029823.1\|WP_069871282.1\|9576596_9577802_+\|geranylgeranyl-reductase-family-protein	gnl\|CDD\|273936	TIGR02032, Uncharacterized_protein_MJ1520, geranylgeranyl reductase family. This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll].	2.39104e-87
NZ_CP029823.1\|WP_099012759.1\|9586107_9586695_-\|DUF4865-family-protein	gnl\|CDD\|379781	pfam16157, DUF4865, Domain of unknown function (DUF4865). This family consists of uncharacterized proteins around 180 residues in length and is mainly found in various Bacillus species. Distant homology and fold prediction suggests proteins from this family would have a ferrodoxin dimeric fold and specifically be related to the putative mono-oxygenase ydhR family PF08803, however this prediction has not been verified by experiment.	2.80978e-105
NZ_CP029823.1\|WP_069871277.1\|9573892_9574927_+\|NUDIX-domain-containing-protein	gnl\|CDD\|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	2.22239e-16
NZ_CP029823.1\|WP_099012756.1\|9591547_9593995_+\|hypothetical-protein	gnl\|CDD\|378390	pfam10101, DUF2339, Predicted membrane protein (DUF2339). This domain, found in various hypothetical bacterial proteins, has no known function.	0.000548582
NZ_CP029823.1\|WP_099012764.1\|9580819_9581728_-\|DUF2797-domain-containing-protein	gnl\|CDD\|378524	pfam10977, DUF2797, Protein of unknown function (DUF2797). This family of proteins has no known function.	1.15052e-23

>NZ_CP029823.1|WP_099012762.1|9582554_9583289_-|maleylpyruvate-isomerase-family-mycothiol-dependent-enzyme
METVELIEILDREGRLLADAAAEAGVDAPVPTCPDWRVRDLLSHIGRVHGWASRIVGEGLTEPVRPAVGPAPPDAELVAWYREVHGRLVDTLTQADPELKCFTFLPTSSSLAFWARRQAHEAAIHRVDAESARGGELSPFTPEFAADGVDELLAGFHGLDRSKVRTETPGTLRVRAMDQDAVWTIRLSQDAPRTERHGEGAADCELGGPARDLYLALWNRLPITALSTEGDGKLAELWRERSGI
>NZ_CP029823.1|WP_099012763.1|9581976_9582486_-|DUF4442-domain-containing-protein
MSPHGLRRAMNWWPPYLFAGVRVVHLAEDWSSARVRLRLRRFNTNYVGTHFGGSLFSMSDPFWMLLVMNRLGRDYIVWDKAGEIDFISPGRGDVFAEFKVTEERLEEIREATADGGKALPWFENEVVAADGTVVARVRKQLYVRRKHRAGRPEPERTEPAAATGHPTEG
>NZ_CP029823.1|WP_069871289.1|9581727_9581970_-|hypothetical-protein
MTGPRSQDERDALTVEIVFALVTAGLLAAVLYVAVASPALFGDLGRTQETVWQGAAVAVAAVGFAVRLVRALWLFSRQRR
>NZ_CP029823.1|WP_099012764.1|9580819_9581728_-|DUF2797-domain-containing-protein
MTRGPRPAPLWQCAGARWDRHGPALVWRHPAQGERLSPLTPDRPLSFTTGPRRDCVGVRRGARHTPCPTGAEVPASAVSAQCPDCARLDRSYSVAADTRTDDPRPYDVYLAWFGPDLVKVGITAAEREGARLLEQAALSYCLLGRGPLMAARRAEAVLGAALGVPDRFPYAAKRTAREAPPPPERRAADLAALHQRARGLGGLPESLALAPFEPVHHDLVFHLDRVRPEPGLIRLVPETTVAGRIDAVAGPDLHLTGTDGRALLLDTRQLAGWPLAPAAADAPTTAPVAARERAAEAPEGLF
>NZ_CP029823.1|WP_079260325.1|9580119_9580785_+|response-regulator-transcription-factor
MIRVALADDQSLVRAGFHALLAAQPDIEVVGQAADGEQALALVREQRPDVVLMDIRMPVLDGLAATRGITGDPALGEVKVVMLTTFELDEYVFEAIRSGASGFLVKDTEPEELLRAVRAVVGGDALLSPGVTRRLIAEFAARSREPAPAEALAELTEREREVMALVGMGLSNQEIARRLVVSPLTAKTHVSRTMVKLGARDRAQLVVLAYESGLVRPGWLG
>NZ_CP029823.1|WP_069871282.1|9576596_9577802_+|geranylgeranyl-reductase-family-protein
MSSDNAAPDNETVWDVVVVGAGPGGASAAHAAACAGRRVLLLEKAELPRYKTCGGGIIGPTRDALPPGFELPLRERVHAVTFSLNGKLSRTRRSKQALFGLINRPEFDAALVEAAKDAGAQIRTGVAVSRVEQHGPAVPDRRTVAVVLADGETVLARAVVGADGSASRIGAHVGVKLDQVDLGLEAEIPVPETVAEDWAGRVLIDWGPMPGSYGWVFPKGDTLTVGVISARGEGAGTKRYLEDFIARLGLAGFEPSISSGHLTRCRSDDSPLSRGRVLVCGDAAGLLEPWTREGISYALRSGRLAGEWAVRVAEAHDAVDARRQALNYAFAIKAGLGVEMGVGRRLHTVFSRRPGMVHAALTGFRPAWRAFTKITRGTTTLGDLVRTHPAARRALAAMDRG
>NZ_CP029823.1|WP_099012765.1|9575065_9576427_-|dipeptidase
MEKAPLAATVAALQPRARAELAELVAFKSVADPAQFPRSECEAAAGWVADALRAEGFEEVALLDTPDGTQSVYGFLPGPAGAPTVLLYAHYDVQPPLDEDAWHTPPFELTERDGRWYGRGAADCKGGVIMHLTALRALKENGGVPVNVKMIVEGSEEQGTGGLERYAEAHPELLTADTIVIGDAGNFRVGLPTVTATLRGMTLLRVSVDTLEGNLHSGQFGGAAPDALAALIRALDSLRAEDGSTTVKGLDPDAEWDGLQYPEEEFRKDAKVLDRVGLIGSGTVADRIWARPSVTVLGIDCPPVIGATPSVQASARALVSLRVPPGVDAEEANRLLAEHLRSSVPWGARLSVEQIGQGQPFRADTTSPAYAAMREAMRLAYDGQEMAIAGQGGSIPLCNTLASLYPEAELLLIGLSEPEAQIHAVNESVSPEELEKLSLTEALFLGMYAESKG
>NZ_CP029823.1|WP_069871277.1|9573892_9574927_+|NUDIX-domain-containing-protein
MIVWLNGAFGAGKTAAARELVDFMPGSTFYDPELVGNGLRMMLPRKRLEQVSDYQDLPSWRRLVVDTGAALIAEVGGPLVVPMTVLRQEYRDEIFGGFAARRIPVRHVLLHTDETILRERIAEREEIPGDADASESVRQWCLAHLAPYQAALTWLTTDAHVVDTTGLTPRQTAQHIADAVREGAGHCDIVQTPEPRAETLAAGVLLFDEEDRVLLVDPTYKPGWEFPGGVVEPGEPPMCAGLREVTEELGVRLDEPLRLLVADWERPQPPGYGGLRLLFDGGKLSSAAAREVLLPGSELRGWRFVTESEAAALLPPVRLSRLRWALRARERGRPLYLEAGVPTD
>NZ_CP029823.1|WP_079256594.1|9572743_9573661_+|carbohydrate-ABC-transporter-permease
MSTTRTAPVRTVAPVTGPGKRRVTRGRLGLHAFLMVVSLAFLAPLLLAVYASLRPYEETAKYGYFSLPRHLSFDYYAKAFNDSGMGKYFVNSLIIAVPGVLLTLFLASFVAFCVTRLKIRGGLVLLMVFTAGNLLPQQVIVTPLYVLFTKIDLPYWMSDSMTMYDSYWAVLAVQVAFQVGFCVFVLANFMRTIPDEIVEAARVDGAGVWTQYWNITLPLCRPALAALATLQFTWMYNDFLWALVFISDGEKLPITSALNNLRGQFFTDYNLLAAGSVIVALPTVLVFLLLQRHFIAGLTLGASKG
>NZ_CP029823.1|WP_079256595.1|9571832_9572747_+|sugar-ABC-transporter-permease
MPLINARRAKRRGPRRFTSRDLAVIGVLLGIPVLLDLALIWGPTLASIGLSFTNWDGIGDIHWVGIDNYKTLFTDYPPFWPAVRNNVLWVAFLGCVATPFGLLLAVLLDKGVRFSRFYQSTLYMPVVLSLAIVGFIAQLIFSRDQGALNAILSNENDPVDWLGNPDLNIWMVLLAAAWRHTGYVMILYLAGLKSVDPSLKEAAAIDGASETQTFFRVVLPTLRPVNIIVGVITVIEALRAFDIVYAINHGRNGLELLSVLVTDNIIGEASRIGFGSAIAVVLLTVSLGFIVTYLVQELRGGKKG
>NZ_CP029823.1|WP_099012760.1|9584784_9586014_+|ROK-family-protein
MTQTRTRLERGRSALGPALALVHTGRAPTRAVLTAELGVTRATAGAVAAELEALGLIQVDSRPLGAAGAQGRPSHRLSIAPHGPVALAAQVHADGFRAALVGLGGRTVATAPGCMTVPADPAHVIDAVVEAGAQLLRGTGRRCVGAGLAVPSAVAEPEGTALNPLHVAWPAGAPVRELFNRSLAAAGIRGEDGEPVTGFAGNDVNLAALAEHRHGAGGGAQHLLCVATGHRGVGGALVLDGRLHTGSAGLALEVGHLTVNPEGPPCHCGSRGCLDIEADPLAFLTAAGRDPGPEVSLLQQARDLLREEYATEPSVRAATGQLIDRLGLGLAGLVNILNPDRIILGGLHRELLEADPERLRAVVAERSLWGRSGGVPILPCTLDHNSLVGAAELAWQPVLDDPLAALGVG
>NZ_CP029823.1|WP_099012759.1|9586107_9586695_-|DUF4865-family-protein
MLAMQYRITLPADYDMRIIRRRVETKGPLLDDFSGLGLKAYGIRERGVDGSPVHQYAPFYLWTAPEAMNRFLWGPGFQGVVRDFGRPSVEHWQGLAFERGPSAGAVPRTATRHATPVPVTADPAAAVEDALARLAERTRKDGVHTTALGIDPRGWELIHFTLWEGSAPPSEPGDRYQVLHLSTPDLDGLPRGRQW
>NZ_CP029823.1|WP_099012758.1|9586915_9587212_+|SHOCT-domain-containing-protein
MNILAHGFADGDGPGPWILLFPLMWALVVGGTVFLLRRAGWRRRAPWRQGPVDFGERSPIAVLGRRFAAGEIDEDEYWRRLSVLDEQFGRHATKGGAL
>NZ_CP029823.1|WP_142881481.1|9587481_9588198_-|ATP-binding-protein
MISRPSRHCTVELQALPSRIGQVRRIVSAQLRYWHLDPLIDPAALGVTELLTNVHRHAEPDKQCTVEIALMLDRLTVSVRDQDPRLPRLRTCDPFATHGRGLALVASVSQSWGMHARDDGSGKVVWFTLAVPRPSATAKSPLTAHGAGRTAPPHRTDASRPAPAPTAPGTGPRPPGARHGTGACTCRPGAQSRTRRPASPVAPAPAPPPRLRHRHRPPPLRRPRCASGPAAARSAASR
>NZ_CP029823.1|WP_069871304.1|9588383_9588719_-|hypothetical-protein
MADNEFNARGVRIERFLRSVTRAGQVMIKDGRLQLLTSYGSEIDSAPVQSVRASKPWFVDGDQAMATVNGTRYRLTLGSQDAKSTSAKSGSGAASRFLDAVRSARGHSPKR
>NZ_CP029823.1|WP_069871306.1|9588898_9590020_+|PLP-dependent-cysteine-synthase-family-protein
MDGEARGIIGTIDVDRSDHGYREWLKEAVRKVQADAQRSADTHLLSFPLPERWGIDLYLKDESTHPTGSLKHRLARSLFLYGLCNGWIRPDKPVIEASSGSTAVSEAYFAKLIGVPFIAVMPRTTSREKCRLIEFHGGRCHFVDDPRTMYEESAALAAESGGHYMDQFTYAERATDWRGNNNIAESIYQQLRLERYPEPAWVVATAGTGGTSATIARYVHYMQYDTRVCVADPENSCFFDGWVHQDAHAFSDRGSRIEGIGRPRMEPSFVPGAIDRMMKVPDAASVAAVRALERAIGRKAGGSTGTGLWSALRIVAEMVAAGRTGSVVTLLCDPGERYLDKYYSDVWLEEQGLDIEPYVKTLDVFLTTGDWTD
>NZ_CP029823.1|WP_079256585.1|9590067_9590541_-|SRPBCC-family-protein
MTHRLRSVGLEYAETAPVRLVFVAEISAPPEAVFEAFADVEGWPRWYRQVKRARATDGGKRREIRLVGGTRFHETVMASDPHERYAYRVDETNAPGLRALLEEWTLRPSGSGGTVVRYVFAVDGTVLLRGAVRALRPGLRRAFHQAVRNLDRMVAAG
>NZ_CP029823.1|WP_069871309.1|9590565_9591411_-|DeoR/GlpR-transcriptional-regulator
MSDNQNLLAEQRRALILDEVRRRGGVRVNELTRKLNVSDMTVRRDLDALARLGVVEKVHGGAVPIAEASTYEPGFEAKSGLELSAKEDIAKAAAAMVTPGTAIALAGGTTAFALAQQLLEVPDLTVVTNSVRVADVFYNAQRSAALGGVGPRPGAATVVLTGGVRTPSDTLVGPVADAAVRSLHFDVLFLGVHGISVEAGLSTPNLAEAETNRHFVRAARRVVVVADHTKWGTVGLSSFASLEQVNALVTDPGLPEEARAEISEYLPELVVAGEPSRTADI
>NZ_CP029823.1|WP_099012756.1|9591547_9593995_+|hypothetical-protein
MGTILEPNDRTTPESGETVPATMPKDTPPDAAEATTARKGGAPPPDLELLVHGVGGTTPEEMLGDPRTSLVTGDETAAVYRRTVDLDAERRPPEEREGPDREGPIREAYVWCNLTSGNSSRALWLLLLPFMVANLAHWMRPPADRRERTVRTYGLFVRLVALTLTVLLIAGACEVGLDLFAWQCAGSADCAGGKSWLGFLSPENHGWWSQPGRRLALAAVLPGALTGLLWYLSNRTWSAYESSPPLERPVDESAPEAGNRPALCLPGFWYGRRIVARLRAAHTAAGFLTVAAGLTLPTTAYDRGPGGSGLQDAVGWALLTLLVMGAVAVVAVVCFRGRSETKVDGELDRITITALPGAALGVLALSVLYAGWSRPDWASSGKLSGNQAFIVIVIGEGALIVAMAVCALVLHRAAPGRTPLYGLAGPAVAVLACGLGAVLSGGVAQRIADWLDGGATPGEGPGIAPPVLLTWLATAIPALLLALVGLLVIFTVRVWRTRDRLLPTIMDGYPGERPDAVRTRRIASTIARAGLTDSAPWIVGPFALLTLLFGACAVTGAWATHQVPGRAADSAPGVVDAAAQTAQALGSWLMGVACLMLVTWARRAYRSPSARRTIGILWDVGTFWPRAAHPFAPPCYAERAVPDLTWRMETWTRRHGGRLVISGHSQGSVLAAAAVWQVDHRTRGRVALLTYGSPLERLYGRWFPAYFGPAQLLSLHGEVRCWRNLWRYTDPIGGPMLLPDGSGPEVDCDALKDPLVYGRTPEHPLPAPILGHGDYQADPVFDRERAGLLARLPEQTPPPPQEGATGQMSSGRSSG
>NZ_CP029823.1|WP_099012755.1|9593964_9596403_-|AAA-family-ATPase
MAQGSVVQVTHSGTSRWRRRTGEYASLSAALEAAGDGDVLSISPGTYRENLVVGRAVTLRGPEGSARGSVRIAPVDGVALTIRASAVVQDLHVEGQDSAAPALLIEDATPELTDVRVATRSAVGIEVRGGARPTVRRCTVDNPAGVGLSVLDGAGGVFEECEVVAAGQSGVAVRGGARPRLDRCRVHHASGSGFSLTGEGSSLEAVGCEVYEIRGAGVQVSGRATGNLTDCRVHRTTADGVNLDTDAVLTLADCEIHDIPENAIDLRSRSVLTLTRSTVRRFGRNGLSVWDPGTRVDANQCELHESTGDYPAVWVSDGATAVLDSCRVREVPDALFVLDRGSRVDVVDSDLSQVRSTAVSVSDGAIVQLDDCRIREAATGAWFRDHGSGGTLANCTIDGAATGVIVTKGADPTVERTTVTGPTEAGFYVSAEGRGTFTGCRVTGSGGYGFHIIDGCRTTLTRCRTERCARGGYEFSEAGPIVEDCTSDESATTALGSPTTPAHPPVTAPAVETAASTGGLLGGVPAQRSAQTPAPAAEPPVDIRPSSAVLGELDALVGLESVKREVRALTDMIEVGRRRQEAGLKAASVRRHLVFTGSPGTGKTTVARLYGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQEAFDRARGGVLFIDEAYALSPEDSGRDFGREAIDTLVKLMEDHREAVVVIVAGYTAEMERFLSVNPGVASRFSRTITFGDYAPEELLRIVEQQAEEHEYRIGDGASEALLKYFTALPKGPAFGNGRTARQTFEAMVERHAGRVAQMSDPTTEDLTLLYPEDLPELI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP029823_15	15.1\|9583990\|19\|NZ_CP029823\|CRISPRCasFinder	9583990-9584008	19	NZ_CP029823.1	5257588-5257606	1	0.947
NZ_CP029823_15	15.1\|9583990\|19\|NZ_CP029823\|CRISPRCasFinder	9583990-9584008	19	NZ_CP029823.1	7229752-7229770	1	0.947
NZ_CP029823_5	5.1\|4426121\|46\|NZ_CP029823\|CRISPRCasFinder	4426121-4426166	46	NZ_CP029823.1	1805763-1805808	2	0.957
NZ_CP029823_5	5.1\|4426121\|46\|NZ_CP029823\|CRISPRCasFinder	4426121-4426166	46	NZ_CP029823.1	2223585-2223630	2	0.957
NZ_CP029823_5	5.1\|4426121\|46\|NZ_CP029823\|CRISPRCasFinder	4426121-4426166	46	NZ_CP029823.1	2320134-2320179	2	0.957
NZ_CP029823_5	5.1\|4426121\|46\|NZ_CP029823\|CRISPRCasFinder	4426121-4426166	46	NZ_CP029823.1	2423225-2423270	2	0.957
NZ_CP029823_5	5.1\|4426121\|46\|NZ_CP029823\|CRISPRCasFinder	4426121-4426166	46	NZ_CP029823.1	4057913-4057958	2	0.957
NZ_CP029823_5	5.1\|4426121\|46\|NZ_CP029823\|CRISPRCasFinder	4426121-4426166	46	NZ_CP029823.1	4265412-4265457	2	0.957
NZ_CP029823_5	5.1\|4426121\|46\|NZ_CP029823\|CRISPRCasFinder	4426121-4426166	46	NZ_CP029823.1	6801061-6801106	2	0.957
NZ_CP029823_5	5.1\|4426121\|46\|NZ_CP029823\|CRISPRCasFinder	4426121-4426166	46	NZ_CP029823.1	9411925-9411970	2	0.957
NZ_CP029823_5	5.1\|4426121\|46\|NZ_CP029823\|CRISPRCasFinder	4426121-4426166	46	NZ_CP029823.1	9641490-9641535	2	0.957
NZ_CP029823_5	5.1\|4426121\|46\|NZ_CP029823\|CRISPRCasFinder	4426121-4426166	46	NZ_CP029823.1	9779548-9779593	2	0.957
NZ_CP029823_8	8.1\|6411746\|35\|NZ_CP029823\|CRISPRCasFinder	6411746-6411780	35	NZ_CP029823.1	6411791-6411825	2	0.943
NZ_CP029823_8	8.1\|6411746\|35\|NZ_CP029823\|CRISPRCasFinder	6411746-6411780	35	NZ_CP029823.1	6411836-6411870	2	0.943
NZ_CP029823_12	12.2\|7928009\|19\|NZ_CP029823\|CRISPRCasFinder	7928009-7928027	19	NZ_CP029823.1	674954-674972	2	0.895
NZ_CP029823_12	12.2\|7928009\|19\|NZ_CP029823\|CRISPRCasFinder	7928009-7928027	19	NZ_CP029823.1	3764799-3764817	2	0.895
NZ_CP029823_15	15.1\|9583990\|19\|NZ_CP029823\|CRISPRCasFinder	9583990-9584008	19	NZ_CP029823.1	4017424-4017442	2	0.895
NZ_CP029823_15	15.1\|9583990\|19\|NZ_CP029823\|CRISPRCasFinder	9583990-9584008	19	NZ_CP029823.1	4669145-4669163	2	0.895
NZ_CP029823_15	15.1\|9583990\|19\|NZ_CP029823\|CRISPRCasFinder	9583990-9584008	19	NZ_CP029823.1	4720682-4720700	2	0.895
NZ_CP029823_15	15.1\|9583990\|19\|NZ_CP029823\|CRISPRCasFinder	9583990-9584008	19	NZ_CP029823.1	5534967-5534985	2	0.895
NZ_CP029823_15	15.1\|9583990\|19\|NZ_CP029823\|CRISPRCasFinder	9583990-9584008	19	NZ_CP029823.1	8501595-8501613	2	0.895
NZ_CP029823_15	15.1\|9583990\|19\|NZ_CP029823\|CRISPRCasFinder	9583990-9584008	19	NZ_CP029823.1	9115818-9115836	2	0.895
NZ_CP029823_15	15.1\|9583990\|19\|NZ_CP029823\|CRISPRCasFinder	9583990-9584008	19	NZ_CP029823.1	9845805-9845823	2	0.895

1. spacer 15.1|9583990|19|NZ_CP029823|CRISPRCasFinder matches to position: 5257588-5257606, mismatch: 1, identity: 0.947

ccttggcggcggactcggc	CRISPR spacer
ccttggcggcggacttggc	Protospacer
***************.***

2. spacer 15.1|9583990|19|NZ_CP029823|CRISPRCasFinder matches to position: 7229752-7229770, mismatch: 1, identity: 0.947

ccttggcggcggactcggc	CRISPR spacer
ccttggcggcggacgcggc	Protospacer
************** ****

3. spacer 5.1|4426121|46|NZ_CP029823|CRISPRCasFinder matches to position: 1805763-1805808, mismatch: 2, identity: 0.957

gtcgtggctggtcgcgcccacgcggcggagccgcatatcggcacag	CRISPR spacer
gtcgtggctggtcgcgcccacgcggcggagccgcacatcgacacag	Protospacer
***********************************.****.*****

4. spacer 5.1|4426121|46|NZ_CP029823|CRISPRCasFinder matches to position: 2223585-2223630, mismatch: 2, identity: 0.957

gtcgtggctggtcgcgcccacgcggcggagccgcatatcggcacag	CRISPR spacer
gtcgtggctggtcgcgcccacgcggcggagccgcacatcgacacag	Protospacer
***********************************.****.*****

5. spacer 5.1|4426121|46|NZ_CP029823|CRISPRCasFinder matches to position: 2320134-2320179, mismatch: 2, identity: 0.957

gtcgtggctggtcgcgcccacgcggcggagccgcatatcggcacag	CRISPR spacer
gtcgtggctggtcgcgcccgcgcggcggagccgcacatcggcacag	Protospacer
*******************.***************.**********

6. spacer 5.1|4426121|46|NZ_CP029823|CRISPRCasFinder matches to position: 2423225-2423270, mismatch: 2, identity: 0.957

gtcgtggctggtcgcgcccacgcggcggagccgcatatcggcacag	CRISPR spacer
gtcgtggctggtcgcgcccgcgcggcggagccgcatatcgacacag	Protospacer
*******************.********************.*****

7. spacer 5.1|4426121|46|NZ_CP029823|CRISPRCasFinder matches to position: 4057913-4057958, mismatch: 2, identity: 0.957

gtcgtggctggtcgcgcccacgcggcggagccgcatatcggcacag	CRISPR spacer
gtcgtggctggtcgcgcccacgcggcggagccgcacatcgacacag	Protospacer
***********************************.****.*****

8. spacer 5.1|4426121|46|NZ_CP029823|CRISPRCasFinder matches to position: 4265412-4265457, mismatch: 2, identity: 0.957

gtcgtggctggtcgcgcccacgcggcggagccgcatatcggcacag	CRISPR spacer
gtcgtggctggtcgcgcccgcgcggcggagccgcatatcgacacag	Protospacer
*******************.********************.*****

9. spacer 5.1|4426121|46|NZ_CP029823|CRISPRCasFinder matches to position: 6801061-6801106, mismatch: 2, identity: 0.957

gtcgtggctggtcgcgcccacgcggcggagccgcatatcggcacag	CRISPR spacer
gtcgtggccggccgcgcccacgcggcggagccgcatatcggcacag	Protospacer
********.**.**********************************

10. spacer 5.1|4426121|46|NZ_CP029823|CRISPRCasFinder matches to position: 9411925-9411970, mismatch: 2, identity: 0.957

gtcgtggctggtcgcgcccacgcggcggagccgcatatcggcacag	CRISPR spacer
gtcgtggctggtcgcgcccacgcggcggagccgcacatcgacacag	Protospacer
***********************************.****.*****

11. spacer 5.1|4426121|46|NZ_CP029823|CRISPRCasFinder matches to position: 9641490-9641535, mismatch: 2, identity: 0.957

gtcgtggctggtcgcgcccacgcggcggagccgcatatcggcacag	CRISPR spacer
gtcgtggctggtcgcgcccacgcggcggagccgcacatcgacacag	Protospacer
***********************************.****.*****

12. spacer 5.1|4426121|46|NZ_CP029823|CRISPRCasFinder matches to position: 9779548-9779593, mismatch: 2, identity: 0.957

gtcgtggctggtcgcgcccacgcggcggagccgcatatcggcacag	CRISPR spacer
gtcgtggctggtcgcgcccgcgcggcggagccgcatatcgacacag	Protospacer
*******************.********************.*****

13. spacer 8.1|6411746|35|NZ_CP029823|CRISPRCasFinder matches to position: 6411791-6411825, mismatch: 2, identity: 0.943

tgtctcacggcgggggtccggctgttctacggtgc	CRISPR spacer
tgtctcatggcgggggtccggccgttctacggtgc	Protospacer
*******.**************.************

14. spacer 8.1|6411746|35|NZ_CP029823|CRISPRCasFinder matches to position: 6411836-6411870, mismatch: 2, identity: 0.943

tgtctcacggcgggggtccggctgttctacggtgc	CRISPR spacer
tgtctcacggcgggcgtccggccgttctacggtgc	Protospacer
************** *******.************

15. spacer 12.2|7928009|19|NZ_CP029823|CRISPRCasFinder matches to position: 674954-674972, mismatch: 2, identity: 0.895

gaacggtggcgacttcggc	CRISPR spacer
gaccggtgtcgacttcggc	Protospacer
** ***** **********

16. spacer 12.2|7928009|19|NZ_CP029823|CRISPRCasFinder matches to position: 3764799-3764817, mismatch: 2, identity: 0.895

gaacggtggcgacttcggc	CRISPR spacer
gaacggtgccgaattcggc	Protospacer
******** *** ******

17. spacer 15.1|9583990|19|NZ_CP029823|CRISPRCasFinder matches to position: 4017424-4017442, mismatch: 2, identity: 0.895

ccttggcggcggactcggc	CRISPR spacer
ccttgcccgcggactcggc	Protospacer
***** * ***********

18. spacer 15.1|9583990|19|NZ_CP029823|CRISPRCasFinder matches to position: 4669145-4669163, mismatch: 2, identity: 0.895

ccttggcggcggactcggc	CRISPR spacer
ccttggcgggggacgcggc	Protospacer
********* **** ****

19. spacer 15.1|9583990|19|NZ_CP029823|CRISPRCasFinder matches to position: 4720682-4720700, mismatch: 2, identity: 0.895

ccttggcggcggactcggc	CRISPR spacer
cctcggcggcgggctcggc	Protospacer
***.********.******

20. spacer 15.1|9583990|19|NZ_CP029823|CRISPRCasFinder matches to position: 5534967-5534985, mismatch: 2, identity: 0.895

ccttggcggcggactcggc	CRISPR spacer
ccttgtcggcggacccggc	Protospacer
***** ********.****

21. spacer 15.1|9583990|19|NZ_CP029823|CRISPRCasFinder matches to position: 8501595-8501613, mismatch: 2, identity: 0.895

ccttggcggcggactcggc	CRISPR spacer
cctcggcggcgggctcggc	Protospacer
***.********.******

22. spacer 15.1|9583990|19|NZ_CP029823|CRISPRCasFinder matches to position: 9115818-9115836, mismatch: 2, identity: 0.895

ccttggcggcggactcggc	CRISPR spacer
ccttggcgacggcctcggc	Protospacer
********.*** ******

23. spacer 15.1|9583990|19|NZ_CP029823|CRISPRCasFinder matches to position: 9845805-9845823, mismatch: 2, identity: 0.895

ccttggcggcggactcggc	CRISPR spacer
ccttggcgacggcctcggc	Protospacer
********.*** ******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP029823_1	1.1\|2947959\|27\|NZ_CP029823\|CRISPRCasFinder	2947959-2947985	27	MH622939	Siphoviridae sp. isolate ctbf_3, complete genome	6723-6749	4	0.852
NZ_CP029823_15	15.2\|9584032\|25\|NZ_CP029823\|CRISPRCasFinder	9584032-9584056	25	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	144764-144788	4	0.84
NZ_CP029823_15	15.2\|9584032\|25\|NZ_CP029823\|CRISPRCasFinder	9584032-9584056	25	MN813686	Mycobacterium phage BirdsNest, complete genome	32820-32844	4	0.84
NZ_CP029823_15	15.2\|9584032\|25\|NZ_CP029823\|CRISPRCasFinder	9584032-9584056	25	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	763871-763895	4	0.84
NZ_CP029823_15	15.2\|9584032\|25\|NZ_CP029823\|CRISPRCasFinder	9584032-9584056	25	MT723933	Streptomyces phage Keanu, complete genome	33078-33102	4	0.84
NZ_CP029823_1	1.1\|2947959\|27\|NZ_CP029823\|CRISPRCasFinder	2947959-2947985	27	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	17319-17345	5	0.815
NZ_CP029823_1	1.1\|2947959\|27\|NZ_CP029823\|CRISPRCasFinder	2947959-2947985	27	JF974315	Rhizobium phage RR1-B genomic sequence	32269-32295	5	0.815
NZ_CP029823_11	11.1\|7721218\|28\|NZ_CP029823\|CRISPRCasFinder	7721218-7721245	28	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1436885-1436912	5	0.821
NZ_CP029823_11	11.1\|7721218\|28\|NZ_CP029823\|CRISPRCasFinder	7721218-7721245	28	NZ_LR134451	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence	116059-116086	5	0.821
NZ_CP029823_13	13.1\|8350048\|26\|NZ_CP029823\|CRISPRCasFinder	8350048-8350073	26	NZ_CP049731	Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence	286992-287017	5	0.808
NZ_CP029823_13	13.1\|8350048\|26\|NZ_CP029823\|CRISPRCasFinder	8350048-8350073	26	NZ_CP053440	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence	207436-207461	5	0.808
NZ_CP029823_13	13.1\|8350048\|26\|NZ_CP029823\|CRISPRCasFinder	8350048-8350073	26	NZ_CP053206	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence	287324-287349	5	0.808
NZ_CP029823_15	15.2\|9584032\|25\|NZ_CP029823\|CRISPRCasFinder	9584032-9584056	25	NZ_LR134452	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence	356753-356777	5	0.8
NZ_CP029823_15	15.2\|9584032\|25\|NZ_CP029823\|CRISPRCasFinder	9584032-9584056	25	NZ_CP046475	Janibacter melonis strain M714 plasmid unnamed, complete sequence	1585-1609	5	0.8
NZ_CP029823_11	11.1\|7721218\|28\|NZ_CP029823\|CRISPRCasFinder	7721218-7721245	28	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	29223-29250	6	0.786
NZ_CP029823_11	11.1\|7721218\|28\|NZ_CP029823\|CRISPRCasFinder	7721218-7721245	28	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5782586-5782613	6	0.786
NZ_CP029823_1	1.1\|2947959\|27\|NZ_CP029823\|CRISPRCasFinder	2947959-2947985	27	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	656996-657022	7	0.741
NZ_CP029823_1	1.1\|2947959\|27\|NZ_CP029823\|CRISPRCasFinder	2947959-2947985	27	HM486077	Tsukamurella phage TPA2, complete sequence	28286-28312	7	0.741
NZ_CP029823_1	1.1\|2947959\|27\|NZ_CP029823\|CRISPRCasFinder	2947959-2947985	27	NC_015210	Tsukamurella phage TPA2, complete genome	28286-28312	7	0.741
NZ_CP029823_11	11.1\|7721218\|28\|NZ_CP029823\|CRISPRCasFinder	7721218-7721245	28	NZ_CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	144701-144728	7	0.75
NZ_CP029823_11	11.1\|7721218\|28\|NZ_CP029823\|CRISPRCasFinder	7721218-7721245	28	NZ_CP039643	Azospirillum sp. TSA2s plasmid p3	21180-21207	7	0.75
NZ_CP029823_15	15.3\|9584080\|31\|NZ_CP029823\|CRISPRCasFinder	9584080-9584110	31	CP040041	Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence	513241-513271	7	0.774
NZ_CP029823_10	10.1\|7192188\|32\|NZ_CP029823\|CRISPRCasFinder	7192188-7192219	32	NZ_CP034999	Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence	440214-440245	9	0.719

1. spacer 1.1|2947959|27|NZ_CP029823|CRISPRCasFinder matches to MH622939 (Siphoviridae sp. isolate ctbf_3, complete genome) position: , mismatch: 4, identity: 0.852

gccacatccggcccgagcccggtcaca	CRISPR spacer
gccgtctctggcccgagcccggtcaca	Protospacer
***.. **.******************

2. spacer 15.2|9584032|25|NZ_CP029823|CRISPRCasFinder matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 4, identity: 0.84

tgacggactcggtctcggccgcggg	CRISPR spacer
tgacggcctcgatctcggccgcgac	Protospacer
****** ****.***********.

3. spacer 15.2|9584032|25|NZ_CP029823|CRISPRCasFinder matches to MN813686 (Mycobacterium phage BirdsNest, complete genome) position: , mismatch: 4, identity: 0.84

tgacggactcggtctcggccgcggg	CRISPR spacer
ccacggtctcggtctcggccacggg	Protospacer
. **** *************.****

4. spacer 15.2|9584032|25|NZ_CP029823|CRISPRCasFinder matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 4, identity: 0.84

tgacggactcggtctcggccgcggg	CRISPR spacer
tgacggcctcgatctcggccgcgac	Protospacer
****** ****.***********.

5. spacer 15.2|9584032|25|NZ_CP029823|CRISPRCasFinder matches to MT723933 (Streptomyces phage Keanu, complete genome) position: , mismatch: 4, identity: 0.84

tgacggactcggtctcggccgcggg	CRISPR spacer
ccacggactcggtctcggccttggg	Protospacer
. ****************** .***

6. spacer 1.1|2947959|27|NZ_CP029823|CRISPRCasFinder matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 5, identity: 0.815

gccacatccggcccgagcccggtcaca	CRISPR spacer
gccgcatccggctcgagcccggtgaac	Protospacer
***.********.********** *

7. spacer 1.1|2947959|27|NZ_CP029823|CRISPRCasFinder matches to JF974315 (Rhizobium phage RR1-B genomic sequence) position: , mismatch: 5, identity: 0.815

gccacatccggcccgagcccggtcaca	CRISPR spacer
ccgtcatccggccggaacccggtcaca	Protospacer
 *  ********* **.**********

8. spacer 11.1|7721218|28|NZ_CP029823|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 5, identity: 0.821

gaccgccccaccgaccaccggcccgtca	CRISPR spacer
gaccgccccatagaccaccggcccgatc	Protospacer
**********. ************* .

9. spacer 11.1|7721218|28|NZ_CP029823|CRISPRCasFinder matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 5, identity: 0.821

gaccgccccaccgaccaccggcccgtca	CRISPR spacer
ggccgccacaccgaccacaggcccgcga	Protospacer
*.***** ********** ******. *

10. spacer 13.1|8350048|26|NZ_CP029823|CRISPRCasFinder matches to NZ_CP049731 (Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence) position: , mismatch: 5, identity: 0.808

gagcccggttccaggagggccggctt	CRISPR spacer
aagcccggttccaggcgggacggcaa	Protospacer
.************** *** ****

11. spacer 13.1|8350048|26|NZ_CP029823|CRISPRCasFinder matches to NZ_CP053440 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence) position: , mismatch: 5, identity: 0.808

gagcccggttccaggagggccggctt	CRISPR spacer
aagcccggttccaggcgggacggcaa	Protospacer
.************** *** ****

12. spacer 13.1|8350048|26|NZ_CP029823|CRISPRCasFinder matches to NZ_CP053206 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence) position: , mismatch: 5, identity: 0.808

gagcccggttccaggagggccggctt	CRISPR spacer
aagcccggttccaggcgggacggcaa	Protospacer
.************** *** ****

13. spacer 15.2|9584032|25|NZ_CP029823|CRISPRCasFinder matches to NZ_LR134452 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence) position: , mismatch: 5, identity: 0.8

tgacggactcggtctcggccgcggg	CRISPR spacer
ccgcggactcgttctcggccgcggc	Protospacer
. .******** ************

14. spacer 15.2|9584032|25|NZ_CP029823|CRISPRCasFinder matches to NZ_CP046475 (Janibacter melonis strain M714 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

tgacggactcggtctcggccgcggg	CRISPR spacer
gatcggtctcggtctcggccgcggc	Protospacer
 . *** *****************

15. spacer 11.1|7721218|28|NZ_CP029823|CRISPRCasFinder matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 6, identity: 0.786

gaccgccccaccgaccaccggcccgtca	CRISPR spacer
ggagttcccaccgaccaccggaccgtca	Protospacer
*.   .*************** ******

16. spacer 11.1|7721218|28|NZ_CP029823|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.786

gaccgccccaccgaccaccggcccgtca	CRISPR spacer
gccgctcccaccgaccaccggccggtcg	Protospacer
* *  .***************** ***.

17. spacer 1.1|2947959|27|NZ_CP029823|CRISPRCasFinder matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 7, identity: 0.741

gccacatccggcccgagcccggtcaca	CRISPR spacer
acggtgaccggcccgagcccggtcacc	Protospacer
.* ... *******************

18. spacer 1.1|2947959|27|NZ_CP029823|CRISPRCasFinder matches to HM486077 (Tsukamurella phage TPA2, complete sequence) position: , mismatch: 7, identity: 0.741

gccacatccggcccgagcccggtcaca	CRISPR spacer
atcggggtcggcccgagcccggtcaca	Protospacer
..*. . .*******************

19. spacer 1.1|2947959|27|NZ_CP029823|CRISPRCasFinder matches to NC_015210 (Tsukamurella phage TPA2, complete genome) position: , mismatch: 7, identity: 0.741

gccacatccggcccgagcccggtcaca	CRISPR spacer
atcggggtcggcccgagcccggtcaca	Protospacer
..*. . .*******************

20. spacer 11.1|7721218|28|NZ_CP029823|CRISPRCasFinder matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 7, identity: 0.75

gaccgccccaccgaccaccggcccgtca	CRISPR spacer
caccgtcccatcgaccaccggcccaagc	Protospacer
 ****.****.*************.

21. spacer 11.1|7721218|28|NZ_CP029823|CRISPRCasFinder matches to NZ_CP039643 (Azospirillum sp. TSA2s plasmid p3) position: , mismatch: 7, identity: 0.75

gaccgccccaccgaccaccggcccgtca	CRISPR spacer
cagcgccgcaccgaccaccggccccagc	Protospacer
 * **** ****************

22. spacer 15.3|9584080|31|NZ_CP029823|CRISPRCasFinder matches to CP040041 (Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

acgtggccgtgtgctcggacgaggtggtcgg	CRISPR spacer
tggtggcggtgtgcttggacgaggtggcatg	Protospacer
  ***** *******.***********.  *

23. spacer 10.1|7192188|32|NZ_CP029823|CRISPRCasFinder matches to NZ_CP034999 (Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence) position: , mismatch: 9, identity: 0.719

cagggtcttggggcggagcccgtggccggtgg	CRISPR spacer
cttgccgagggtgcggagccggtggccggtgg	Protospacer
*  * .   ** ******** ***********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1428230 : 1442315

uncultured_phage(33.33%)

tail,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099016045.1\|1428230_1430264_-\|tail	phage tail protein I	NA	NA	NA	NA
WP_099016044.1\|1430260_1432348_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_099016043.1\|1432344_1434294_-	hypothetical protein	NA	NA	NA	NA
WP_069860743.1\|1434290_1434704_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_079260195.1\|1434700_1435402_-	type IV secretion protein Rhs	NA	NA	NA	NA
WP_069860741.1\|1435398_1436580_-	phage late control D family protein	NA	NA	NA	NA
WP_069860740.1\|1436590_1437262_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_093701969.1\|1437374_1437569_-	hypothetical protein	NA	NA	NA	NA
WP_069860738.1\|1437565_1438084_-\|tail	phage tail protein	T2KT02	uncultured_phage	1.4e-08	37.8
WP_099016042.1\|1438080_1439574_-\|tail	phage tail protein	H6WFT7	Cyanophage	5.4e-16	31.8
WP_069860736.1\|1439575_1440031_-\|tail	phage tail protein	NA	NA	NA	NA
WP_099016041.1\|1440050_1442315_-\|tail	phage tail protein	J9PVC2	Bacillus_phage	9.0e-47	31.4

DBSCAN-SWA_2

1598771 : 1621881

Bacillus_phage(33.33%)

tail,integrase,plate

attL 1595186:1595202|attR 1622943:1622959

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1595186:1595202	attL	NA	NA	NA	NA
WP_099015968.1\|1598771_1600334_+\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	2.0e-69	34.2
WP_069860626.1\|1600369_1600813_+\|tail	phage tail protein	NA	NA	NA	NA
WP_069860625.1\|1600812_1601244_+	hypothetical protein	NA	NA	NA	NA
WP_069860622.1\|1603109_1603541_+\|tail	phage tail protein	NA	NA	NA	NA
WP_069860621.1\|1603544_1604348_+	peptidase M23	NA	NA	NA	NA
WP_099015966.1\|1604351_1606271_+	VgrG-related protein	NA	NA	NA	NA
WP_069860619.1\|1606393_1606669_+	PaaR repeat-containing protein	NA	NA	NA	NA
WP_020866084.1\|1606671_1607079_+	GPW/gp25 family protein	NA	NA	NA	NA
WP_069860618.1\|1607075_1609064_+\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_099015965.1\|1609065_1609626_+\|tail	phage tail protein I	NA	NA	NA	NA
WP_069860821.1\|1610285_1610810_+	discoidin domain-containing protein	NA	NA	NA	NA
WP_099015964.1\|1610928_1611687_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_099015963.1\|1611794_1613012_+	D-galactonate dehydratase family protein	Q6A202	Oenococcus_phage	1.3e-44	27.5
WP_099015962.1\|1613008_1614442_+	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	5.0e-35	30.7
WP_099015961.1\|1614475_1615861_+	MFS transporter	NA	NA	NA	NA
WP_099015960.1\|1615899_1616907_+	NAD(P)-dependent alcohol dehydrogenase	NA	NA	NA	NA
WP_099017240.1\|1617156_1617579_+	hypothetical protein	NA	NA	NA	NA
WP_099015959.1\|1617738_1621245_+	multidrug transporter	NA	NA	NA	NA
WP_099017239.1\|1621314_1621881_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
1622943:1622959	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2768687 : 2781741

Streptomyces_phage(100.0%)

capsid,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099015520.1\|2768687_2769944_+\|terminase	PBSX family phage terminase large subunit	A0A1J0MCH4	Streptomyces_phage	9.8e-221	90.5
WP_099015519.1\|2769909_2770362_-	hypothetical protein	NA	NA	NA	NA
WP_142881340.1\|2770414_2770840_-	hypothetical protein	NA	NA	NA	NA
WP_099017177.1\|2770955_2772368_+\|portal	phage portal protein	A0A1J0MCN7	Streptomyces_phage	1.5e-238	85.8
WP_099017176.1\|2772716_2774651_+\|capsid	phage capsid protein	A0A1J0MCU0	Streptomyces_phage	2.2e-259	66.8
WP_142881341.1\|2774904_2775522_-	hypothetical protein	NA	NA	NA	NA
WP_107528534.1\|2775542_2776007_+	hypothetical protein	A0A1V0E621	Streptomyces_phage	2.2e-48	77.1
WP_099015518.1\|2776993_2777251_+	hypothetical protein	A0A1V0E647	Streptomyces_phage	2.4e-09	60.9
WP_099015517.1\|2777372_2778602_+	helix-turn-helix transcriptional regulator	A0A0K1Y5U6	Streptomyces_phage	2.1e-18	24.4
WP_099017175.1\|2778888_2779098_+	hypothetical protein	NA	NA	NA	NA
WP_099015516.1\|2779094_2779610_+	hypothetical protein	A0A0K1Y5C7	Streptomyces_phage	1.0e-22	47.6
WP_099015515.1\|2779732_2780605_+	radical SAM protein	NA	NA	NA	NA
WP_099015514.1\|2780601_2781741_+	methyltransferase domain-containing protein	A0A1J0MC37	Streptomyces_phage	5.0e-30	32.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP029823

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection