CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP041386	Arcobacter butzleri strain ED-1 chromosome, complete genome	1 crisprs	PrimPol,DEDDh,csa3	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041386_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041386_1

996174-996280

Orphan

Consensus_repeat	Method
GTAACTGGAAATAATAATTCTGGTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041386_1

>merge|NZ_CP041386|1|996174-996280|CRISPRCasFinder
GTAACTGGAAATAATAATTCTGGTGGCTTAGTTGGATGGAATCAAAATGGAACAATTAAAAACTCTTATGCATCTGGTTATGTAAATGGAAATAATAATTCTGGTGG

>NZ_CP041386|1|1|996174-996280|CRISPRCasFinder
GTAACTGGAAATAATAATTCTGGTGG	CTTAGTTGGATGGAATCAAAATGGAACAATTAAAAACTCTTATGCATCTGGTTAT
GTAAATGGAAATAATAATTCTGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041386.1\|WP_143262833.1\|976173_977973_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP041386.1\|WP_143262836.1\|986282_987629_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP041386.1\|WP_143262849.1\|1005332_1005872_+\|general-stress-protein	unknown	unknown	gnl\|CDD\|179895
NZ_CP041386.1\|WP_014468649.1\|989785_990268_-\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|223560
NZ_CP041386.1\|WP_143262843.1\|998532_999045_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041386.1\|WP_143262844.1\|999164_999953_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224044
NZ_CP041386.1\|WP_143262847.1\|1001581_1002637_+\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176245
NZ_CP041386.1\|WP_143262840.1\|993641_994313_-\|response-regulator	unknown	unknown	gnl\|CDD\|223816
NZ_CP041386.1\|WP_014468663.1\|1004865_1005207_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP041386.1\|WP_143262845.1\|1000091_1000571_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|171560
NZ_CP041386.1\|WP_143262834.1\|977982_978696_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP041386.1\|WP_004509216.1\|990355_990622_+\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|237656
NZ_CP041386.1\|WP_143262846.1\|1000570_1001506_+\|DUF4974-domain-containing-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP041386.1\|WP_143262838.1\|990633_991728_+\|glycoside-hydrolase-family-3-protein	unknown	unknown	gnl\|CDD\|224389
NZ_CP041386.1\|WP_143262842.1\|996821_998489_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP041386.1\|WP_143262835.1\|978712_986263_+\|DUF4347-domain-containing-protein	unknown	unknown	gnl\|CDD\|372982
NZ_CP041386.1\|WP_046992219.1\|1002661_1003282_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041386.1\|WP_143262839.1\|991731_993639_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|377898
NZ_CP041386.1\|WP_143262837.1\|987628_989749_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|223914
NZ_CP041386.1\|WP_143262848.1\|1003278_1003872_-\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|223736

Protein	Function_ID	Function_description	E-value
NZ_CP041386.1\|WP_143262833.1\|976173_977973_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	6.11909e-19
NZ_CP041386.1\|WP_143262836.1\|986282_987629_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	2.57296e-10
NZ_CP041386.1\|WP_143262849.1\|1005332_1005872_+\|general-stress-protein	gnl\|CDD\|179895	PRK04930, PRK04930, glutathione-regulated potassium-efflux system ancillary protein KefG; Provisional.	5.81852e-50
NZ_CP041386.1\|WP_014468649.1\|989785_990268_-\|DnaJ-domain-containing-protein	gnl\|CDD\|223560	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones].	3.08657e-10
NZ_CP041386.1\|WP_143262844.1\|999164_999953_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	3.65496e-54
NZ_CP041386.1\|WP_143262847.1\|1001581_1002637_+\|zinc-binding-dehydrogenase	gnl\|CDD\|176245	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	0
NZ_CP041386.1\|WP_143262840.1\|993641_994313_-\|response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	8.59615e-28
NZ_CP041386.1\|WP_014468663.1\|1004865_1005207_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.11991e-32
NZ_CP041386.1\|WP_143262845.1\|1000091_1000571_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|171560	PRK12527, PRK12527, RNA polymerase sigma factor; Reviewed.	4.74093e-27
NZ_CP041386.1\|WP_143262834.1\|977982_978696_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	4.34522e-26
NZ_CP041386.1\|WP_004509216.1\|990355_990622_+\|DnaJ-domain-containing-protein	gnl\|CDD\|237656	PRK14280, PRK14280, molecular chaperone DnaJ.	2.22841e-09
NZ_CP041386.1\|WP_143262846.1\|1000570_1001506_+\|DUF4974-domain-containing-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	1.32691e-37
NZ_CP041386.1\|WP_143262838.1\|990633_991728_+\|glycoside-hydrolase-family-3-protein	gnl\|CDD\|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	1.18161e-57
NZ_CP041386.1\|WP_143262842.1\|996821_998489_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	6.53795e-63
NZ_CP041386.1\|WP_143262835.1\|978712_986263_+\|DUF4347-domain-containing-protein	gnl\|CDD\|372982	pfam14252, DUF4347, Domain of unknown function (DUF4347). This domain family is found in bacteria and eukaryotes, and is approximately 160 amino acids in length. There are two completely conserved residues (C and G) that may be functionally important.	5.03851e-55
NZ_CP041386.1\|WP_143262839.1\|991731_993639_-\|histidine-kinase	gnl\|CDD\|377898	pfam07695, 7TMR-DISM_7TM, 7TM diverse intracellular signalling. This entry represents the transmembrane region of the 7TM-DISM (7TM Receptors with Diverse Intracellular Signalling Modules).	7.71906e-27
NZ_CP041386.1\|WP_143262837.1\|987628_989749_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|223914	COG0845, AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane].	2.49045e-08
NZ_CP041386.1\|WP_143262848.1\|1003278_1003872_-\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.58457e-15

>NZ_CP041386.1|WP_143262840.1|993641_994313_-|response-regulator
MFEFKNFSILFVEDDLEIQKNMSKILSLLCNKVYVASNGLEAYEIFTNNVIHIIITDYEMPFINGYDLVLKIREISQNIPIIILSNYTDKEKLLKCIPLNLTSYLEKPIIYEKLLETLQLCKNQIENNATLYLTINDTLKYDFNTKSLIQNGNYIKLTTLEIQIFEYLLNKKNQLVYNDELLSVIFENDYYGNIKNIIYRLRKKVSKDVIVNYKNLGYMLNTK
>NZ_CP041386.1|WP_143262839.1|991731_993639_-|histidine-kinase
MKITLFLLIFTSFLFSNSLIIENDNFGKNSLQKYTQIYTDETSSLNFEEIKNKIFFTNIKNNFTATKNSIWSNFSITNKSNKKIEIFLENEKAGIDIIDVYILKDENFYEKIELGDYRDIKLRELKTKKSTFKLILDENSTYTFFIKYKSYSSISTLWYIYDKESFEKSLNIESIIWGFFIGVVIALCLHNLFVYFSTRDFIFLSYIFVSIFSALYQLSINGIFYQLFENENLKYLSGLNWVFSFTTLIFVIIFHISFLKPRINSFMFKSLFICLLINICVVIFYSFSLEHEELRYAVTYTNFITYLIVIVLFTTTIWAIKDKYIGARFYLFVQLFYFSISFYVFMVLVGYFESFEYFWLVIPIVVLFDIFFLSIALYIKVKEIEKRKKESEQFIISQARFTTMGNNIANMIHQWKNPIAQIGSQIALLESIYKLDKKNFDEAIEQTLPQMKDSILFLNHVMNDIYNFYKNPSSKEYFNIADEIDSLLRILNDEIKVNSITINKNITPLNFYGYKASFLNVLMIILENSIYQLKTFKKQSRKIFIYLEKIDDSQIVLTIEDNGGGIEISHLEKIFDLNYSSKKDKGSGIGLALAKELIEKRLNGKISVENTLVGASFIISLKIGTDILDENTNSY
>NZ_CP041386.1|WP_143262838.1|990633_991728_+|glycoside-hydrolase-family-3-protein
MIKRFLILAILFVSNSLFADENYSKAQIEKMIAKMVILGFNGTSVDKNDEIYKNIQSGLGGVILFDKDPNDKTKIKNIKDKNQLKNLNTQLQAISNQKLLISIDQEGGVVQRLKKDSGFVDTLSAKDIATNGEGFAKQSYKALAKDLKDVGINLDFAPVVDLSINKNNKVIVTRGRSFGESSSEVIKYSSIFVDELRKQNVISVLKHFPGHGSSLADSHLGFVDITKTWNQKELEPYKYFIKNNDVDMIMTAHVFNENLDKNYPATLSYNINTKLLREELGYKGVLVTDDLQMSAISKHYDLKQTLTLAINSGVNMLLFANQLAKPVTLKEIVDTVYLQIQNKQISLQKIIDSNNKIDKLLKKI
>NZ_CP041386.1|WP_004509216.1|990355_990622_+|DnaJ-domain-containing-protein
MDYSEFEKAVDMFGILTTVSKKDIKNKYLKLSKKYHPDMPEGSNEKFTELKKNYDLLLAYMDNYCYSFDEEEFKRQFPAFTNYKNWMK
>NZ_CP041386.1|WP_014468649.1|989785_990268_-|DnaJ-domain-containing-protein
MYNNTIIYIFNRIISVAIFLFILYLIFTNFGTFLIIIAILVSIIAFIIYNFKKKLKQSNFNNFEFKFDNSQFQNGKFDFDFKDFQNFNNSSFQGFSNTARFDEVSKAKEFFGFTQTPTKEEVKKRYKELAKKYHPDLNDGNEEKMKELNHYRDILMNIVE
>NZ_CP041386.1|WP_143262837.1|987628_989749_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MFQQQQEQTILPKIRNDLKLLETSVGEDGSKKWLLFDPIQNKYFDISLDTFELISNWQSDIELEEFIKILEEKNYQIEKESLKTFVDFLINNNLIVCDDSKYTSRMISIQKQSKQNIFKWLIHNYLFIRIPLLKPDKWLERNKTRVDFFYSSLWQNIVLSLGIIGIIFVLRDWDSFISTFMYLFTKEGFFYYFLSLVFVKSFHELGHAFTAKKYGCKVPTMGVAFLVLFPVLYTDTTNAWKLKSKYQRLKIVIAGMKVELYLALIATFLWSFAPEGILKSILFIIATTSWISSLLINISPFLRFDGYYALSDLTDTKNLQPRSFAMARWFLRKNILGLEEVKPESLTKSKEKFFIIYAIGTWIYRFFLFLGIAVLVYYYAFKVLGIILFLVEIVWFLLLPIYKELKVWWSKKSQLEFNKRNKISLAVFLIIVFLIFIPWNTNIKMPAIIESKNYFEFYPSENGYIEEIYFNSGENVKKGQLLLLIKSPELELKISQIEKEIEQMKMEIDKQAGLKENLNKRFILEENLQKKLNEKEGLEKIIKKFEVRANFDGKIYFNDVFKPNQWISKKEVVFTLYDNLDYRIVGFCNENDFKLLKENSQSKFIFSSGDIKDIHSNLTTISKVSIPYLEFPELSSDYKGEIATRLENKKIKTEQAYYKITIDLQKNELDLKSRKVGILVTKGEASSFISRIFKKAVSVVIRESEF
>NZ_CP041386.1|WP_143262836.1|986282_987629_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MESNISKLLQLEHNCRNCENIKELYFQIVNNTRSIVNYSQGILLTPDLKDKYKVVAISDISMVDSTSPYVQWLEEIIDDLQKSEKSKDIFIVDMKNDLKEENSKVSHEYAPPNLVYIPLKNTKEDREVNYVFLLFKEENWDENDILMLKHLSSSLAYFLFAMRRCSLFQSLKRVSFKSRYFKIAAVFLFILMLIPVRLSVLAPLEVDAKNPYVVSSPLNGVIEEVKVFPNDKIEKNQLIVQFDDVDFTNNYLVAKRTLDVTNAELFTTKQSSFLDPKQKSQISSLENQVKLKEAELSYAKDQLDKTKIYSKEDGIAIINNPNDWKGRPVTTGERIFLIANPNSIELKIMLPASDAIFLEENAIVKAFFDNDPINSWSAKVKYVSYKPELTEQNILSYRITAEFEDIKENGYIPSIGLRGTAKIYSKKVTLFFYLFRKPITSVRQWIGW
>NZ_CP041386.1|WP_143262835.1|978712_986263_+|DUF4347-domain-containing-protein
MKRRNLKKPVISVLEQRVLFDGAAVATAVDVLDNSSFSSSTTKDSTTVNDVTNNSAENSVHKAQAVQGFEKDRREVAFVDITVKDYQTLVDGVGQGVETYLVSSMDEIKSILQNQTNIDSIHILSHGKTGEITVGNDILNKNTLQNFDEVLESMKSSLTQDGDILLYGCNVGNDGKGQEFIDLLASETQADIAASNDITGSNNLGGDWDLEAKSGTIETTAIVVNEYNHSLANLTTDNDGGFTSSSEISGSIATTDKINFARGPGSFYNDLYTLSGVANGTQVKLYIAQGTLSDPYIQVTDSNGTVIVQDDDSGDSGAANGYDAYVKFTWNNNYTIRATTYNTGAVGTYTIYTDTGTLIIKPDTAPTFTSSPVTLNISDTPDDNSIPSSSGLLTATDAENDALNFSGGGTNSFGTLSISANGSWTWAPNNAYINSLTSNATTSYTVSVSDGINITNQTFTINITSATNDAPVITSSNSVSFQENTATNVAAYTITATDAENNTLTYSISGTDSQYFNINSTTGQITFKNSPDYETKTSYSLMITALETNGTGLSASKMITISIANVNEPPIIESSNISNYTENGSPVVLSPSLTIDKGETSTLASAQISISSGFISGDILNFVNDGSTMGNIVASYNSATGILTLTSSGATATLAQWQSALRSISYHSTSETLSLTQMTRTISWKVSDGNLESTVDTSTLKVTGVNDAPTISVSTPSGFTETTTMDKQTLSQNGTVTFSDVDNNVNITYSYNNNISWSGGTLNSTLSSALIAGFNTSATNVSSGTTSWSYNVNNVDLNFLAAGETITLSYNVIATDIAGATAMTTITFTITGTNDAPVFGTVITGPTTITAPTAGTTNPNAGIETFNNGLLRFGNGSIDSVNASTGMLEQPFYYKDGNWYQLTFSTYQLNMAIAADYNNGSAKTDVDWNLEGTVNLTPTFTNTTVNNSGFNSSTGTGTIVWTGEIVVGSAYLKVTNVYTLEAGAKYIKANTYIENIGSTSTENLRFWVGTRDDYVAGSDSPAKQKGNIVDGEFQMISNSSEQAKAIKIYTGAGANATAVLFYSTNSNVNTVIAPGYGWTTSNQYAPGIDPLNSVYDQSFDDGGYAMFTNLNNVATGQTVMFDWYYAAGAVSELSDITSSLEQATSTNLQENSSSLVLADDYTITDLDSTDSVNVTVSSVQINTPTGLTLPANYTDDIIKNMLQITSNPVITSGSTTGTVSWNFNSGSDYTFNFLGRGQTLTLLYTLTATDSHGATATTVVTISIDGANDAPRVVVDSQDSDIATISETNSTISTSGTLSIADPDMIDTSFSVSKSSVVVSGMTNGLTANTAALLNMLTVNTQNFDINWAFNSGNQYFNYLSAGETLTITYTIAVSDSSNAVTNKTITINIIGTNDSVSLNTPATIYYTDTDGNDVFSATTSQLTASDLDRNTTFTYGIDNGTISGTTVTKTGAYGVLTLNTTTGVYTYTPNSNAINALTSNSSETFTVTVNDGNGSIDTKSLVIQIESVNDAPLLGGNSSPNTFVENGSAVQVDSNITVTDLEGTSYDEGYVSFDIKTNKGAFDNLSISSIGGISLAGANVKYGNTVIGTVDSILNGQNGKELRIHLNDNAYSLQVQALARAITFSNPSDNFNDSVRSIDIKVNDGGNGGETSARYSIKTVTVNLQSVNDLPTINLGNSTFLVEKIIGQNDNGTLSLGNILSVADLDNNSLTVTIQTTNYGLITINSSILNGVNSSQIIGNGSRTVTITGTIEQINNTLNASNGITYVAGFGNDYITPGADYLKITAKDTLNGESSSQKLVMVLPAIPNIFSDNVVGKEDDVSNIIVNINNLVTDINDNGGTYVFGTGTPDITNSSGNITTNGSLTPFDNSTYIYDNSGKVIGYQLEHGKIILNEGKNRVDNTDFAKFTFIPNENWYGVQTFLYQFTSNDGEVSNIAQIAIFVTPVNDAPVISIVNNNITIDEDNPFVFENSNLITLLDLDVIDNTQILDLTLNVTNGKLELSQMTDLTILEGANNSSIIKIRGSLASLQNAISGLKYTPNQDYNGSDTLSIKLNDNTNIGEGNSLEDIKTINFVINPVNDAPEFTDQTDSVTEGEQISGILPASDIDSSSITFSINGNAPTGFVLHNDGSYSFDSSSYDYIGRGETDTIIIPVTVTDAEGLTKTANFSITITGTNDAPTVSMENIDAKIPFGDTYTKDISNLFDDKDLSNVFTYQASNLPSGLTIDPNTGIISGRVSQSGNFVISITAIDSEGAKVTRTYNMLVVAPAQNQPARPDSLPTIITNNPTGENPNNGTKLNNYADNSNNSAGVINFSSSDGFVIDTGKGFLDTKTSNNQESLSQNNSASDKNLANTNNNNSNDSRTIQANVDLNVSTTGKVLFGEGSQDSFSIVGITIEDINVQSDFIKVKVVDTNIAQSYVVTQIDGTALPVGLSFDPKTGNISGKIPADLDELKISIKAINSDGTTRVLNLKLDLKQLKQKTQAEVNERFVGFKEQIAFENQKLDSYGSHLAKLFA
>NZ_CP041386.1|WP_143262834.1|977982_978696_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MKKFLGLILLISTLYSNENLTARAVIISLDKTVLSSEIAGEIIELSKYEGDSFKKGETLIRLDCSIYKAQKKKIEVEKEIARLELEKNKKLDTYGSIGTFEIQISQENFNKQKAESDIASINVERCDIKAPFDGRIASKKVSKYQSIKPQDELLEIIGTDNLEAKVVVPSSWLIWLKKGIQLDLNIDETGTTVKAQVVQMDSIVDPTSQSITVRAKLLKPFDNITPGMSATANFYEN
>NZ_CP041386.1|WP_143262833.1|976173_977973_+|TolC-family-protein
MVKKTSKVIALSIMTSFVITACSIKPEPILKEEIKEQVKNDLNVLNEVVLPVTKPITLDEAIQRGLKYNLQKKVKVLETALSQQQLDLVYYDMLPSLTASAGYSERNNYAASASTSFLNGNPQPLGSNPSYSVSQEKERTTADIGFSWNILDFGLSYVRAQQQADKFLIAKEKEKKVEHNLTQEIRRAYYQAVSAQDLLKRIQPMMVEVNKALADSKEVQNQRVAKSPMESLSYQRELLDILRSLHTLESSLISAKVELAELMGLKPGINFELADKVEKDYEIPQFSMNLDEMEKIALENRPEVTETRYQERISDKEITAAKLKMLPGINLNTSLSYENSDYLLNNDWHSYGANVSWNLLNVFKGSEMNKLAKTQVEVAKEQKLALSMAVLSQVHLSIVKFNQAKKEYFLAKDYLNVASDIYNLTEVENNLNINSRLILIKEKLNNILATLRYSYAYANVQNSYGTIFASLGVEEKDLEKAEEKIGLISNENQEKPNVEKTVIVPTTQVEVKKEIKKEPTIINNPTKKEIKVADSFYNKNFYNSEISIYQGEKLSINGEDYIVKKSDDIFKIAKKHGVSLKSIVIENFWLIEKNRVKFK
>NZ_CP041386.1|WP_143262842.1|996821_998489_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MKLVKRVVTLSLLSSVVLLGVTPNFNSGNIEKQIQAPKDIPTAQKPSVELKGLKSSSAIKDFDESKKAFIKDFTFSGNSKISSQELNELLKDYKAKELSFKQIQEVLSLVNKYYRTKGYFVSRAYLVSQDLEKNNNILQVSILEGSYGEFKVENSSLVNDSVIQNILDSVKDKDIIDTNSIQRVTNLINDRAGSVVTKAAISPGQKVGTSDFDIGVEATKRVNGYIVADNYGSRYTGYNRLQSLLNINSPFNIGDKISISGLVSNGADLKNGKIAYELPLNSYGLKADFGYSRTNYNLIEEYESLDAKGNSNIYEVGLSYPLLRTTNENLYLKGKYYYKDLNDYMSGDKYEDKSISSFVTSLDYDKNYSIGNLPARIFANLNLTSGHLSSKDSNPNNGNYNKIDTYIANDIYFSDIFSLNSMLTAQKVLGHKNLDGNEDLSLGGVNSVRLYSYSEQSGENGYVLNLEFLTKLPNISSYSHKVGLFYDIGDVYAEKNQDTTFERKRLKDIGLGYYANYEDFFARVQMAWNANSDEIQSEYTNHKNSKLLLQAGWVF
>NZ_CP041386.1|WP_143262843.1|998532_999045_-|hypothetical-protein
MLFALDAQYFIGTNLKKTQAKIEHDIEVYTPFGTVNESLEQTIKDSALELKIGTILNNTYRIYLSGVEYKTNLFKVKMINGNYEYLIPITNDFRLFSGVHMGTFKNNMVYGVQGGFIYDITKSIEFEAGVFYSRYKKEVKVKGEKFGFEFTDNIKIENSKSLFAGFNYKF
>NZ_CP041386.1|WP_143262844.1|999164_999953_-|ATP-binding-cassette-domain-containing-protein
MNIIDFENIDVGYDEKIVLKDVKLKIKEGEHWAILGANGSGKSTLMKLIQSEIHPRHTKEFKKEIFGKSRYSIFELRCELGIITNDLHNYFAKEAGYLTGFEVVLSGHYGSIGIFTHQDFTKEQILKAKEVMQFLEIEDLKDKKVAAMSTGQLRKCIVGRALIHNPKAFVLDEPTVGLDIKAQINFIKMLKKLALRSSIILVTHHLEEVFEEIENVALVYNQTIYKSGKKEDILTSENLSEIFETKLTLKEKNKRYFIEEIL
>NZ_CP041386.1|WP_143262845.1|1000091_1000571_+|sigma-70-family-RNA-polymerase-sigma-factor
MIQYYQELLYYVQKMLGDKEKAKDIIQESYSRMLDIDKISPIENKRAFLYKLAKNIVFDIVRKDKHILSIEYFEEEYNIPEKEQPDELLFEENQQEMLFEILDTIPAKNAQAFILHVFEGFTRKEIASKMGITVSAVEKHIIRATEKIKDKLKDIEGYN
>NZ_CP041386.1|WP_143262846.1|1000570_1001506_+|DUF4974-domain-containing-protein
MKTINEEAIFWLIKEKEGLNETEKIELKQWLEKNPFHQKSYNTNKLLRENFSKISGNMREKLVEKANQGAKKTKFIEQTKKFFVAASLFFCIGFGLDYFFIPVYSQNLVSIQEKENVFILPDSSKIVLDVNSSLNVNYYKSSRNVDFIAGRAVFYVSKNKDKPFIIKTKDEKIEVVGTAFEVSNLNDSFSVKVKEGRVKVFFDKKIAYLNQGEKIFINKNKKIELAKTQIEDIATWEKGFLTFDKTTLKDSLEEFSRYKNIKIEFQDEKVSKTEITGKFDIDHFDKFLMALPKIYSVKVDKSQNTFKFSKK
>NZ_CP041386.1|WP_143262847.1|1001581_1002637_+|zinc-binding-dehydrogenase
MKGFAMLKIGQVGWIEKEKPTCGVMDAIVKPIAVSPCSSDVHTVWAGALGDRHDMILGHEAVGEVVEVGSLVKDFKVGDKVVVPAITPDWNSLEAQAGYSMHSGGMLAGWKFSNFKDGVFAEYFHVNDADGNLALLPDDVDPIEAVMLCDMVPTGVHGAELADIKFGDSVCVIGIGPVGLMAVRASAIRGASRLFAVGSRPNCIEVAKDFGATDIINYKNGDIVEQVMEKTKGKGVDRVIIAGGDVDTFVQATNILKPGGTIGNVNYLGLGDFVKIPRLAWGNGMAHKTIVGGLMPGGRLRIEKLVSLIQSKRINPKKLITHTFNGMEHIEEALLLMKDKPRDLIKPVVIF
>NZ_CP041386.1|WP_046992219.1|1002661_1003282_+|hypothetical-protein
MNIKKLKELEESFFEYYPNGFEDDKLLPIIKRFNSAKFHEETKELFKKENFSQPEIICDNFSKIISKSPLISLFEKPKVRDAIKSMSIYEKDMFCIALDELLYGNFKDGFEDIVDILIQKNLAKWSIITLIPYYFSPTKEFFIKPTTTKNVLKYLEIENLVYKPKPTFEFYNAYKKVLNEMKKQVSKKLTSDNSGFTGFLRMGIEP
>NZ_CP041386.1|WP_143262848.1|1003278_1003872_-|cyclic-nucleotide-binding-domain-containing-protein
MKINNDKIFESLNKTMNSYFPISKTTWEEFKNICKIRTIKKNEYAFDMYDKVNAISFVYSGLFRTFIINEKGEEYTKNFFWETRFYGPMVALLTNTPITSIVQALEDSIVVDIQHDKYREILAKYDDLKMYHILYLEKHWIMQKDDNGYSLVLEDAKQRYERFKKEFGHIISRLSQYQIASYLGISPTHLSRIRKES
>NZ_CP041386.1|WP_014468663.1|1004865_1005207_-|helix-turn-helix-transcriptional-regulator
MISLNGKVYECPSKIPLDLVDDKWKFLILWNLAFKALRISELSEKISDISQRTLSRKLKALEEVSLVKRVVFAEVPPRVEYSLTIHGERLLEVFEMMSKWGEQYAKEVNSVIE
>NZ_CP041386.1|WP_143262849.1|1005332_1005872_+|general-stress-protein
MAQSKKRVLIYLVHPNMNESRVNKVLSEAAQKEDFVTINNLYAKYPDFKIDAKKEQQLLLENDVIVFQFPMYWLSSPALLKEWLDVVLEYNFAFGEHYKLENKTLLIATSVASGQAQYSKTGSNKFTVEEILNSFEATANYIKMNYAKPFVTYETFVISDEKLEESAKNYVEYLKELAK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

407593 : 415361

Indivirus(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014468200.1\|407593_408781_+	exodeoxyribonuclease VII large subunit	A0A1V0SIT1	Klosneuvirus	5.7e-45	38.8
WP_004510490.1\|408854_409334_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_046994004.1\|409361_409895_-	peptidylprolyl isomerase	A0A1V0SCU1	Indivirus	1.2e-29	46.5
WP_143262477.1\|410047_410431_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_012012250.1\|410423_410744_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_012012251.1\|410748_411609_+	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	4.3e-10	26.8
WP_004510495.1\|411744_412002_+	co-chaperone GroES	A0A221S3C8	uncultured_virus	4.7e-13	44.2
WP_143262480.1\|412001_413636_+	chaperonin GroEL	A0A240F779	uncultured_virus	4.0e-174	63.8
WP_143262481.1\|413984_415361_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	1.6e-19	28.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage