CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP019630	Enterobacter asburiae strain 17Nkhm-UP2	4 crisprs	DEDDh,csa3,WYL,DinG,cas3	0	0	7	0
NZ_AP019631	Enterobacter asburiae strain 17Nkhm-UP2 plasmid pEAS17Nkhm-UP2-1, complete sequence	0 crisprs	NA	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP019630_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019630_1

295459-295605

Orphan

Consensus_repeat	Method
TGTTTTCTCCCTCTCCCCGTGGGAGAGGGTCGGGGTGAGGGCACCAGACCGCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019630_1

>merge|NZ_AP019630|1|295459-295605|CRISPRCasFinder
TGTTTTCTCCCTCTCCCCGTGGGAGAGGGTCGGGGTGAGGGCACCAGACCGCACGAGGAAAAGCACAAAGGCAACGCAAGTTGCCTTTTTTAATGTTTTCTCCCTCTCCCCGTGGGAGAGGGTCGGGGTGAGGGCACCAGACCGCAC

>NZ_AP019630|1|1|295459-295605|CRISPRCasFinder
TGTTTTCTCCCTCTCCCCGTGGGAGAGGGTCGGGGTGAGGGCACCAGACCGCAC	GAGGAAAAGCACAAAGGCAACGCAAGTTGCCTTTTTTAA
TGTTTTCTCCCTCTCCCCGTGGGAGAGGGTCGGGGTGAGGGCACCAGACCGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019630.1\|WP_008500099.1\|291741_292668_+\|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivH	unknown	unknown	gnl\|CDD\|182689
NZ_AP019630.1\|WP_029741816.1\|287036_288302_+\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|180690
NZ_AP019630.1\|WP_008500102.1\|294707_295421_+\|high-affinity-branched-chain-amino-acid-ABC-transporter-ATP-binding-protein-LivF	unknown	unknown	gnl\|CDD\|183231
NZ_AP019630.1\|WP_032662628.1\|284735_285791_+\|cell-division-protein-FtsX	unknown	unknown	gnl\|CDD\|182910
NZ_AP019630.1\|WP_023310024.1\|293938_294706_+\|high-affinity-branched-chain-amino-acid-ABC-transporter-ATP-binding-protein-LivG	unknown	unknown	gnl\|CDD\|183080
NZ_AP019630.1\|WP_033144397.1\|298099_298945_+\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpE	unknown	unknown	gnl\|CDD\|182875
NZ_AP019630.1\|WP_033144399.1\|300743_301121_-\|DUF2756-family-protein	unknown	unknown	gnl\|CDD\|182398
NZ_AP019630.1\|WP_073001667.1\|301244_302990_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|181992
NZ_AP019630.1\|WP_048976358.1\|298946_300017_+\|sn-glycerol-3-phosphate-import-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
NZ_AP019630.1\|WP_048980862.1\|300013_300760_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236524
NZ_AP019630.1\|WP_048979414.1\|289777_290161_-\|aspartate-1-decarboxylase-autocleavage-activator-PanM	unknown	unknown	gnl\|CDD\|380212
NZ_AP019630.1\|WP_072163886.1\|288499_289600_+\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein-LivJ	unknown	unknown	gnl\|CDD\|237959
NZ_AP019630.1\|WP_048980860.1\|303841_304879_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|182305
NZ_AP019630.1\|WP_023310025.1\|295773_297090_+\|sn-glycerol-3-phosphate-ABC-transporter-substrate-binding-protein-UgpB	unknown	unknown	gnl\|CDD\|182876
NZ_AP019630.1\|WP_023310023.1\|292664_293942_+\|branched-chain-amino-acid-ABC-transporter-permease-LivM	unknown	unknown	gnl\|CDD\|236896
NZ_AP019630.1\|WP_033144400.1\|303096_303585_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|182263
NZ_AP019630.1\|WP_023310018.1\|286042_286900_+\|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl\|CDD\|235838
NZ_AP019630.1\|WP_039264148.1\|290585_291695_+\|high-affinity-branched-chain-amino-acid-ABC-transporter-substrate-binding-protein-LivK	unknown	unknown	gnl\|CDD\|237959
NZ_AP019630.1\|WP_033144396.1\|297215_298103_+\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpA	unknown	unknown	gnl\|CDD\|182550
NZ_AP019630.1\|WP_003861565.1\|305001_305697_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655

Protein	Function_ID	Function_description	E-value
NZ_AP019630.1\|WP_008500099.1\|291741_292668_+\|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivH	gnl\|CDD\|182689	PRK10740, PRK10740, high-affinity branched-chain amino acid ABC transporter permease LivH.	0
NZ_AP019630.1\|WP_029741816.1\|287036_288302_+\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|180690	PRK06777, PRK06777, 4-aminobutyrate--2-oxoglutarate transaminase.	0
NZ_AP019630.1\|WP_008500102.1\|294707_295421_+\|high-affinity-branched-chain-amino-acid-ABC-transporter-ATP-binding-protein-LivF	gnl\|CDD\|183231	PRK11614, livF, high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF.	1.04133e-169
NZ_AP019630.1\|WP_032662628.1\|284735_285791_+\|cell-division-protein-FtsX	gnl\|CDD\|182910	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional.	0
NZ_AP019630.1\|WP_023310024.1\|293938_294706_+\|high-affinity-branched-chain-amino-acid-ABC-transporter-ATP-binding-protein-LivG	gnl\|CDD\|183080	PRK11300, livG, leucine/isoleucine/valine transporter ATP-binding subunit; Provisional.	0
NZ_AP019630.1\|WP_033144397.1\|298099_298945_+\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpE	gnl\|CDD\|182875	PRK10973, PRK10973, sn-glycerol-3-phosphate ABC transporter permease UgpE.	0
NZ_AP019630.1\|WP_033144399.1\|300743_301121_-\|DUF2756-family-protein	gnl\|CDD\|182398	PRK10350, PRK10350, DUF2756 family protein.	2.42543e-23
NZ_AP019630.1\|WP_073001667.1\|301244_302990_+\|gamma-glutamyltransferase	gnl\|CDD\|181992	PRK09615, ggt, gamma-glutamyltranspeptidase; Reviewed.	0
NZ_AP019630.1\|WP_048976358.1\|298946_300017_+\|sn-glycerol-3-phosphate-import-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
NZ_AP019630.1\|WP_048980862.1\|300013_300760_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236524	PRK09454, ugpQ, cytoplasmic glycerophosphodiester phosphodiesterase; Provisional.	2.63696e-170
NZ_AP019630.1\|WP_048979414.1\|289777_290161_-\|aspartate-1-decarboxylase-autocleavage-activator-PanM	gnl\|CDD\|380212	NF033213, matur_PanM, aspartate 1-decarboxylase autocleavage activator PanM. Members of this family, called PanM (or PanZ), although related to the GNAT family N-acetyltransferases, have a different function. Then enzyme PanD, aspartate 1-decarboxylase, has an active site modified Ser residue, created by cleavage of a precursor form. PanM promotes the maturation of the CoA biosynthesis enzyme PanD, but also inhibits its activity in the presence of CoA. Figure 6 in PMID:26276430 identifies residues considered critical to interaction with PanD; seed alignment sequences and cutoff scores were chosen to separate proposed PanM from functionally distinct relatives.	1.54683e-80
NZ_AP019630.1\|WP_072163886.1\|288499_289600_+\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein-LivJ	gnl\|CDD\|237959	PRK15404, PRK15404, high-affinity branched-chain amino acid ABC transporter substrate-binding protein.	0
NZ_AP019630.1\|WP_048980860.1\|303841_304879_+\|oxidoreductase	gnl\|CDD\|182305	PRK10206, PRK10206, putative oxidoreductase; Provisional.	0
NZ_AP019630.1\|WP_023310025.1\|295773_297090_+\|sn-glycerol-3-phosphate-ABC-transporter-substrate-binding-protein-UgpB	gnl\|CDD\|182876	PRK10974, PRK10974, sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB.	0
NZ_AP019630.1\|WP_023310023.1\|292664_293942_+\|branched-chain-amino-acid-ABC-transporter-permease-LivM	gnl\|CDD\|236896	PRK11301, livM, leucine/isoleucine/valine transporter permease subunit; Provisional.	0
NZ_AP019630.1\|WP_033144400.1\|303096_303585_-\|N-acetyltransferase	gnl\|CDD\|182263	PRK10140, PRK10140, N-acetyltransferase.	1.74485e-118
NZ_AP019630.1\|WP_023310018.1\|286042_286900_+\|RNA-polymerase-sigma-factor-RpoH	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	0
NZ_AP019630.1\|WP_039264148.1\|290585_291695_+\|high-affinity-branched-chain-amino-acid-ABC-transporter-substrate-binding-protein-LivK	gnl\|CDD\|237959	PRK15404, PRK15404, high-affinity branched-chain amino acid ABC transporter substrate-binding protein.	0
NZ_AP019630.1\|WP_033144396.1\|297215_298103_+\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpA	gnl\|CDD\|182550	PRK10561, PRK10561, sn-glycerol-3-phosphate ABC transporter permease UgpA.	0
NZ_AP019630.1\|WP_003861565.1\|305001_305697_+\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	3.05333e-83

>NZ_AP019630.1|WP_008500102.1|294707_295421_+|high-affinity-branched-chain-amino-acid-ABC-transporter-ATP-binding-protein-LivF
MEKAMLTFDKVNAHYGKIQALHDVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTARIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAHRDEYQTRIKWVYELFPRLWERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRKEGMTIFLVEQNANQALKLADRGYVLENGRVVLEDTGDALLANEAVRSAYLGG
>NZ_AP019630.1|WP_023310024.1|293938_294706_+|high-affinity-branched-chain-amino-acid-ABC-transporter-ATP-binding-protein-LivG
MSQPLLSVNGLMMRFGGLLAVNNVNLDLHKKEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTIMLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAQDEALDRAATWLDRIGLLQHANRQASNLAYGDQRRLEIVRCMVTQPEILMLDEPAAGLNPKETKELDELIAELRDSHDTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEEIRNNPDVIRAYLGEA
>NZ_AP019630.1|WP_023310023.1|292664_293942_+|branched-chain-amino-acid-ABC-transporter-permease-LivM
MKPMHFAMALLSAAMFFVLASVFMGVQLELNGTKLVVDTAADIRWQWVFIGTAVVFLFQLLRPLFQKTLKNVSGPKFVLPAIDGSTVKQKLFLVALLVAAVAWPFVVSRGTVDIATLTMIYVILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEVTGGPNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIWLYLVALLLVVITLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLKNGQAKGEQA
>NZ_AP019630.1|WP_008500099.1|291741_292668_+|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivH
MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDSSWLLVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWIVGASENFAASITTMQLVIWVVTFIAMLALTLFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSFALLILVLLVMPTGILGRPEVEKV
>NZ_AP019630.1|WP_039264148.1|290585_291695_+|high-affinity-branched-chain-amino-acid-ABC-transporter-substrate-binding-protein-LivK
MKRNAKTLIAGMVALSISHAAMADDIKVAVVGAMSGPVAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIQYVIGHLCSSSTQPASDIYEDEGILMITPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKKGGANIVFFDGITAGEKDFSALIARLQKENIDFVYYGGYYPEMGQMLRQARATGLKTQFMGPEGVGNASLSNIAGDSAEGMLVTMPKRYDQDPANKAIVDALKAQKKDPSGPYVWITYAAVQSLATALDRSGSKEPLDLVKDLKAHGANTVIGPLNWDEKGDLKGFEFGVFKWHADGSSSAAK
>NZ_AP019630.1|WP_048979414.1|289777_290161_-|aspartate-1-decarboxylase-autocleavage-activator-PanM
MKLTIVRLVTFSDQDHIDLGKIWPEYSPSSLRVDETHRIYAARFNERLLAAVRVTLSGTEGALDSLRVRDVTRRRGVGQYLIEEVIRENPSVTSWWMADVGVENRGVMAAFMQALGFTAQESGWEKR
>NZ_AP019630.1|WP_072163886.1|288499_289600_+|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein-LivJ
MNMKGKALLAGCIALAFSTMAQADIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGEKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYKLTLRTTGLDSDQGPTAAKYIVEKVKPKRIAIVHDKQQYGEGLARSVQDNLKKANADVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSADPAEIATWLKANTVETVMGPLSWDAKGDLKGFEFGVFDWHANGTATDAK
>NZ_AP019630.1|WP_029741816.1|287036_288302_+|4-aminobutyrate--2-oxoglutarate-transaminase
MKNNELNDRRLQATPRGIGVMCNFYADKAENATVWDVEGNEYIDFAAGIAVLNTGHRHPKVISAIEKQLHAFTHTAYQIVPYEGYVALAERINQRVPVDGPAKTAFFSTGAEAVENAVKIARAYTKRPGLITFGGAFHGRTFMTMALTGKVAPYKLGFGPFPGSVYHAQYPNELHGVSTAEALKSLERIFKADIAPDQVAAIILEPVQGEGGFNIAPADFMQALRALCDTHGILLIADEVQSGFARTGKLFSMEHHCVKPDLITMAKSLAGGMPLSAVSGRAEVMDAPAPGGLGGTYAGNPLAIAAAHAVLDVIDEEDLCTRSAHLGHHLVEVLNKAKEHCPYIADIRAQGSMVAVEFNDPQTGQPSPEFTRQVQERALQEGLLLLSCGVYGNVIRFLYPLTIPEAQFRKALDIISASLTR
>NZ_AP019630.1|WP_023310018.1|286042_286900_+|RNA-polymerase-sigma-factor-RpoH
MTKEMQTLALAPVGNLESYIRAANTWPMLTAEEEKELAEKLHYQGDLEAAKKLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKAKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDMTFDMSSDDDASDSQPMAPVLYLQDKTSNFADGIEEDNWEDQAANKLTHAMEGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
>NZ_AP019630.1|WP_032662628.1|284735_285791_+|cell-division-protein-FtsX
MNKRDAINQIRQFGNRFDRFRKPQGGGDGNRNAPKRQKAAPKPASRKTNVFNEQVRYAFHGALQDLKSKPLATFLTVMVIAISLTLPSVCYMVYKNVNQAASQYYPSPQITVYMDKALDDNAAAQVVGQIQAEQGVEKVNYLSREDALGEFRNWSGFGGALDMLEENPLPAVAVVIPKLDFQGTDSLNTLRDRITRIKGIDEVRMDDSWFARLAALTGLVGRVAAMIGVLMVAAVFLVIGNSVRLSIFARRDTINVQKLIGATDGFILRPFLYGGALLGFSGAFLSLILSEILVMRLSSAVTEVAQVFGTKFDISGLGFDECLLLLLVCSMIGWVAAWLATVQHLRHFTPD
>NZ_AP019630.1|WP_023310025.1|295773_297090_+|sn-glycerol-3-phosphate-ABC-transporter-substrate-binding-protein-UgpB
MTSLRHTALGLALGLAFATNAMAVTTIPFWHSMEGELGKEVDSLAQRFNDTHPDYKIVPVYKGNYEQSLSAGIAAFRTGNAPALLQVYEVGTATMMASKAIKPVYEVFKEAGINFDESQFVPTVAGYYTDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLAEYTAKLKAAGMKCGYASGWQGWIQIENFSAWHGLPVATKNNGFDGTDAVLEFNKPEQVKHIALLADLNKKGDFSYFGRKDESTEKFYNGDCAITTASSGSLADIRHYAKFNYGVGMMPYDADVKGAPQNAIIGGASLWVMQGKDKGTYKGVAEFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQGFYSKNPGADIATRQMLNKPPLPFTKGLRLGNMPQIRTIVDEELESVWTGKKTPQQALDSAVERGNQLLRRFEQSTKS
>NZ_AP019630.1|WP_033144396.1|297215_298103_+|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpA
MSSSRPVFRSRWLPYLLVAPQLVITVIFFIWPAGEALWYSVQSVDPFGLSSQFVGLDNFTALFHDSYYLDSFWTTMKFSALVTVSGLVASLFFAALVDYVVRGSRIYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFFAALQSIPRSLVEAAAIDGAGPIRRFFRLSLPLIAPVSFFLLVVNLVYAFFDTFPVIDAATAGGPVQATTTLIYKIYREGFAGLDLSASAAQSVVLMFLVIILTVVQFRYVESKVRYQ
>NZ_AP019630.1|WP_033144397.1|298099_298945_+|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpE
MIENRRGLTIFSHTMLILGIIVILFPLYVAFVAATLDTKAVFDTPMTLIPGGHLFENMKTIWTQGVGANSAPFWLMMLNSFIMAFGITVGKITVSMLSAFAIVWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKLLDSYAGLTLPLMASATATFLFRQFFMTLPDELIEAARIDGASPMRFFRDIVLPLSKTNLAALFVITFIYGWNQYLWPLLIIQDVNLGTAVAGIKGMIATGEGTTLWNQVMAAMLLTLIPPVVIVLAMQRAFVRGLVDSEK
>NZ_AP019630.1|WP_048976358.1|298946_300017_+|sn-glycerol-3-phosphate-import-ATP-binding-protein-UgpC
MAGLKLQAVTKSWDGKTQVIQPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTSGDIWIDRQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKGHIDERVKEAARILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQLHRRLKTTSLYVTHDQVEAMTLAQRVMVMNKGIAEQIGTPVEVYEKPATRFVASFIGSPAMNLLEGRISSAGTHFELESGMALPINWYYRGYAGRKMTLGIRPEHIVLTSQADGGVPLVMDTLEMLGADNLAHGRWGEQKMVVRLPHQERPKAGSTLWLHLPENHLHLFDGETGQRV
>NZ_AP019630.1|WP_048980862.1|300013_300760_+|glycerophosphodiester-phosphodiesterase
MSNWPYPHVVAHRGGGKLAPENTLAAIDVGARYGHTMIEFDAKLSKDGEIFLLHDDNLERTSNGWGVAGELPWRDLLKVDAGSWYSGEFKGEPLPLLADVADRCRQHGMMANIEIKPTTGTGPLTGKVIALAARELWEGMTAPLLSSFEIDALEAAQAVVPELPRGLLLDEWREDWRELTTRLACVSIHLNHRLLDEARVKMLKDAGLHILVYTVNKPQRAAELLRWGVDSICTDAIDLIGPDFSSAD
>NZ_AP019630.1|WP_033144399.1|300743_301121_-|DUF2756-family-protein
MKRLWILTALIPFAALAQPLNTMNNPNQQGYVIPSQQRMQTEMMSQQQQQKGMLNQQLKTQTQMQQQSLQNQMNANTQRVQQGQVREQPLPNKNGGMLGGMTSSGSGQQHMLPPQSNGSMLNPQN
>NZ_AP019630.1|WP_073001667.1|301244_302990_+|gamma-glutamyltransferase
MMKPTFLRWVAIAALMAGGTFSVAANPPAAPPVSYGVEEDVFHPVRATHGMVASVDALATKVGVDILRQGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMMLRTKDGKTTAIDFREMAPSQASRDMFLDDQGNPDSKKSLTSHLATGTPGTVAGFSLALEKYGTMPLNKVVQPAIKLARDGFVVNDALADDLKTYGSEVIPNHENSKAIFWKDGEPLKKGDRLVQKNLAKSLELIAEHGPDAFYKGAIADQIAEEMQKNGGLITKADLAEYKAVEREPISGTYRGYEVFSMPPPSSGGIHIVQILNILENFDMHKFGFGSADAMQVMAEAEKRAYADRSEYLGDPDFVKVPWQALTNKAYAKSIADQIDINKAKPSSEIRPGKLAPYESNQTTHFSVVDKDGNAVAVTYTLNTTFGTGIVAGNSGILLNNEMDDFSAKPGVPNVYGLVGGDANAVGPKKRPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDFGMNVAEATNAPRFHHQWLPDELRVEKGFSPDTIKLLEQRGQKVAVKEAMGSTQSIMVGPDGALFGASDPRSVDDLSAGY
>NZ_AP019630.1|WP_033144400.1|303096_303585_-|N-acetyltransferase
MSEIVIRHAEPKDYDAIRQIHAQPEVYHNTLQVPHPSEQMWQERLSDQPGIKQLVACIEGHVAGHLCIVVAQRPRRSHVADFGICVGAQWQNRGVASALMRTMIDMCDNWLRVDRIELTVFVDNEPAIAVYKKHGFEIEGTGKRYALRNGEYVDAYYMARMK
>NZ_AP019630.1|WP_048980860.1|303841_304879_+|oxidoreductase
MTLHCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRRAKPEEQSPQYSHIHFTSDLDEVLNDPQVKLVVVCTHADSHFDYAKRALEAGKNVLVEKPFTPTIAEAKALFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGDIVEIESHFDYYRPVAETQPGLPQDGSFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVKIDYPKFIVHGTKGSFVKYGIDQQETSLKANIMPGEPGFAADNSVGVLEYVNDEGVTVREELKPETGDYGRVYDALYETLTTGTPNYVKESDVLTNLEILERAFEQASPATVTLAK
>NZ_AP019630.1|WP_003861565.1|305001_305697_+|pirin-family-protein
MIYLRKANERGHANHGWLDSWHSFSFADYYDPNFMGFSALRVINDDVIDAGQGFGTHPHKDMEILTYVLEGAVEHQDSMGNKEQVPAGEFQIMSAGTGVRHSEYNPSKTEKLHLYQIWIIPEETGITPRYEQRRFDAKQGKQLVLSPDAREGSLKVHQDMELYRWALAKDEQSVHQIAANRRVWIQVVKGEVSINGTKATTADGLAVWDEQALSVHADSESEILLFDLPPV

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Crispr_ID: NZ_AP019630_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019630_2

981837-981946

Orphan

Consensus_repeat	Method
CCCTCTCCCTGTGGGAGAGGGCCAGGGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019630_2

>merge|NZ_AP019630|2|981837-981946|CRISPRCasFinder
CCCTCTCCCTGTGGGAGAGGGCCAGGGTGGGGCAAGGTAAAAGCAAAACAGCAACGCAATTTGCTGTTTTTGATGTTTTTACCCTCTCCCTGTGGGAGAGGGCTAGGGTG

>NZ_AP019630|2|2|981837-981946|CRISPRCasFinder
CCCTCTCCCTGTGGGAGAGGGCCAGGGTG	GGGCAAGGTAAAAGCAAAACAGCAACGCAATTTGCTGTTTTTGATGTTTTTA
CCCTCTCCCTGTGGGAGAGGGCTAGGGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019630.1\|WP_048978951.1\|993731_996347_+\|DUF2339-domain-containing-protein	unknown	unknown	gnl\|CDD\|378390
NZ_AP019630.1\|WP_008503271.1\|978789_979467_+\|AroM-family-protein	unknown	unknown	gnl\|CDD\|182491
NZ_AP019630.1\|WP_029739758.1\|990312_991686_+\|proline-specific-permease-ProY	unknown	unknown	gnl\|CDD\|182566
NZ_AP019630.1\|WP_014168840.1\|997772_998375_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|184962
NZ_AP019630.1\|WP_048975262.1\|987206_988502_+\|phosphate-regulon-sensor-histidine-kinase-PhoR	unknown	unknown	gnl\|CDD\|182895
NZ_AP019630.1\|WP_008503270.1\|979538_979826_+\|pyrimidine/purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|182565
NZ_AP019630.1\|WP_023310540.1\|979874_980789_-\|recombination-associated-protein-RdgC	unknown	unknown	gnl\|CDD\|234726
NZ_AP019630.1\|WP_047061223.1\|975164_976268_+\|diguanylate-cyclase-AdrA	unknown	unknown	gnl\|CDD\|182329
NZ_AP019630.1\|WP_143345970.1\|976282_977092_-\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
NZ_AP019630.1\|WP_048978954.1\|981974_985106_-\|exonuclease-subunit-SbcC	unknown	unknown	gnl\|CDD\|182330
NZ_AP019630.1\|WP_048978952.1\|991825_993643_+\|maltodextrin-glucosidase	unknown	unknown	gnl\|CDD\|236759
NZ_AP019630.1\|WP_048978955.1\|977189_977648_+\|YaiI/YqxD-family-protein	unknown	unknown	gnl\|CDD\|178882
NZ_AP019630.1\|WP_024906795.1\|988911_990231_+\|branched-chain-amino-acid-transporter-carrier-protein-BrnQ	unknown	unknown	gnl\|CDD\|185331
NZ_AP019630.1\|WP_143345971.1\|996343_997729_+\|DUF3999-domain-containing-protein	unknown	unknown	gnl\|CDD\|372507
NZ_AP019630.1\|WP_032638425.1\|978360_978552_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182421
NZ_AP019630.1\|WP_045400629.1\|980912_981818_+\|fructokinase	unknown	unknown	gnl\|CDD\|236565
NZ_AP019630.1\|WP_032639634.1\|977791_978316_+\|shikimate-kinase-AroL	unknown	unknown	gnl\|CDD\|235153
NZ_AP019630.1\|WP_023334671.1\|974741_975062_+\|phosphate-starvation-inducible-protein-PsiF	unknown	unknown	gnl\|CDD\|183165
NZ_AP019630.1\|WP_008503265.1\|986495_987185_+\|phosphate-response-regulator-transcription-factor-PhoB	unknown	unknown	gnl\|CDD\|182277
NZ_AP019630.1\|WP_048978953.1\|985102_986308_-\|exonuclease-subunit-SbcD	unknown	unknown	gnl\|CDD\|182871

Protein	Function_ID	Function_description	E-value
NZ_AP019630.1\|WP_048978951.1\|993731_996347_+\|DUF2339-domain-containing-protein	gnl\|CDD\|378390	pfam10101, DUF2339, Predicted membrane protein (DUF2339). This domain, found in various hypothetical bacterial proteins, has no known function.	8.28478e-79
NZ_AP019630.1\|WP_008503271.1\|978789_979467_+\|AroM-family-protein	gnl\|CDD\|182491	PRK10481, PRK10481, hypothetical protein; Provisional.	4.5945e-122
NZ_AP019630.1\|WP_029739758.1\|990312_991686_+\|proline-specific-permease-ProY	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_AP019630.1\|WP_014168840.1\|997772_998375_-\|peroxiredoxin	gnl\|CDD\|184962	PRK15000, PRK15000, peroxiredoxin C.	5.99401e-148
NZ_AP019630.1\|WP_048975262.1\|987206_988502_+\|phosphate-regulon-sensor-histidine-kinase-PhoR	gnl\|CDD\|182895	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR.	0
NZ_AP019630.1\|WP_008503270.1\|979538_979826_+\|pyrimidine/purine-nucleoside-phosphorylase	gnl\|CDD\|182565	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase.	5.75461e-64
NZ_AP019630.1\|WP_023310540.1\|979874_980789_-\|recombination-associated-protein-RdgC	gnl\|CDD\|234726	PRK00321, rdgC, recombination associated protein; Reviewed.	0
NZ_AP019630.1\|WP_047061223.1\|975164_976268_+\|diguanylate-cyclase-AdrA	gnl\|CDD\|182329	PRK10245, adrA, diguanylate cyclase AdrA; Provisional.	0
NZ_AP019630.1\|WP_143345970.1\|976282_977092_-\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	5.74718e-130
NZ_AP019630.1\|WP_048978954.1\|981974_985106_-\|exonuclease-subunit-SbcC	gnl\|CDD\|182330	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional.	0
NZ_AP019630.1\|WP_048978952.1\|991825_993643_+\|maltodextrin-glucosidase	gnl\|CDD\|236759	PRK10785, PRK10785, maltodextrin glucosidase; Provisional.	0
NZ_AP019630.1\|WP_048978955.1\|977189_977648_+\|YaiI/YqxD-family-protein	gnl\|CDD\|178882	PRK00124, PRK00124, YaiI/YqxD family protein.	2.14373e-76
NZ_AP019630.1\|WP_024906795.1\|988911_990231_+\|branched-chain-amino-acid-transporter-carrier-protein-BrnQ	gnl\|CDD\|185331	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ.	0
NZ_AP019630.1\|WP_143345971.1\|996343_997729_+\|DUF3999-domain-containing-protein	gnl\|CDD\|372507	pfam13163, DUF3999, Protein of unknown function (DUF3999). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 440 and 470 amino acids in length. There is a single completely conserved residue D that may be functionally important.	3.37941e-78
NZ_AP019630.1\|WP_032638425.1\|978360_978552_+\|hypothetical-protein	gnl\|CDD\|182421	PRK10380, PRK10380, hypothetical protein; Provisional.	7.08366e-31
NZ_AP019630.1\|WP_045400629.1\|980912_981818_+\|fructokinase	gnl\|CDD\|236565	PRK09557, PRK09557, fructokinase; Reviewed.	0
NZ_AP019630.1\|WP_032639634.1\|977791_978316_+\|shikimate-kinase-AroL	gnl\|CDD\|235153	PRK03731, aroL, shikimate kinase AroL.	2.05968e-105
NZ_AP019630.1\|WP_023334671.1\|974741_975062_+\|phosphate-starvation-inducible-protein-PsiF	gnl\|CDD\|183165	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF.	5.90126e-44
NZ_AP019630.1\|WP_008503265.1\|986495_987185_+\|phosphate-response-regulator-transcription-factor-PhoB	gnl\|CDD\|182277	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB.	4.34777e-162
NZ_AP019630.1\|WP_048978953.1\|985102_986308_-\|exonuclease-subunit-SbcD	gnl\|CDD\|182871	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional.	0

>NZ_AP019630.1|WP_045400629.1|980912_981818_+|fructokinase
MRIGIDLGGTKTEVIALSEQGEQLFRHRLPTPRDDYHQTIETIASLVEMAEQATGQTGSVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSQRLNREVRLANDANCLAVSEAIDGAAAGAQTVFAVIIGTGCGAGVAFGGRAHIGGNGTAGEWGHNPLPWMDEDELKYRAEVPCYCGKQGCIETFISGTGFATDYHRLSGQPLKGNEIMRLVEEQDPVAELALSRYEMRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYATVPNLVKQWVFGGECETPIRKAVHGDSSGVRGAAWLWPE
>NZ_AP019630.1|WP_023310540.1|979874_980789_-|recombination-associated-protein-RdgC
MLWFKNLMVYRLSRDVSLRAEEMEKQLAAYTFSPCGSQDMAKTGWVPPMGSQSDALTHASSTGQIIVCARKEEKILPTPVVKQALEAKIFKLEAEQGRKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSIGSLPVVPLALETPIELTLTEWVRSGAAAQGFQILDEAELKALLEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQRIQFVMCDDGSVKRLKFCDELRDQNEDIDREDYAQRFDADFILMTGELAALIQNLVEGLGGEAQR
>NZ_AP019630.1|WP_008503270.1|979538_979826_+|pyrimidine/purine-nucleoside-phosphorylase
MLQSNEYFSGKVKSIGFTSSSTGRASVGVMAEGEYTFGTAEAEEMTVVSGALNVLLPGETEWKVYAAGQVFNVPGHSEFHLQVAEPTSYLCRYLK
>NZ_AP019630.1|WP_008503271.1|978789_979467_+|AroM-family-protein
MKATLAILTIGVVPVSEVLPLLTEHVSEQQITHLSLLGKMSREEVMEDYAVEAGEDPLATLLSDGKLAHVSRQKIERSLQGVIEVLDNQGYDVILLMSTAPIKGLTARNAILLEPMRIIPPLVASIVDGHQVGVIVPIEELMDNQEAKWHVLEKVPLYALANPFWDSEAKLIAAGKELLERGADVLILDCLGFHQHHRDLLQKALDVPVLLSNVLMARLASELLM
>NZ_AP019630.1|WP_032638425.1|978360_978552_+|hypothetical-protein
MPTRPPYPREARIVTVEKGQTGHTVTWYQLRADHPKPDSLISEHETEQEALDAKRRYEDPDKT
>NZ_AP019630.1|WP_032639634.1|977791_978316_+|shikimate-kinase-AroL
MTQPIFLVGPRGCGKTTVGLELARVCHRQFVDTDHWLQTEAGKTIAEIVEQEGWESFRARETAALKAVTTPSAVIATGGGIVLAECNRHFMREKGIVIYLSAPVSALVGRLEAFPEEGQRPALTSRPLNEEVSEVLAERDALYREAAHHVVDASASPEDVVIQIITALRLACAS
>NZ_AP019630.1|WP_048978955.1|977189_977648_+|YaiI/YqxD-family-protein
MAIWVDADACPNVIKEILFRAAERVQMPLTLVANQNIRVPPSRFIRSLRVPAGFDVADNEIVRLCRAEDLVITADIPLAAEVLEKGAAALNPRGERYSPSTIREKLTMRDFMDTMRASGVQTGGPDSLSQRDRQQFAAELDKWLLEVKRRTA
>NZ_AP019630.1|WP_143345970.1|976282_977092_-|pyrroline-5-carboxylate-reductase
MDKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVVELRDQYGINAAESAQEVAQVADIVFGAVKPNIMIKVLSDITSSLNKETLVVSIAAGVTLDQLARALGHDRKIVRAMPNTPSLVNAGMTSVTPNALVTTEEVADVLNIFRCFGEAEVIAESMIHPVVGVSGSAPAYVFMFLEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGKHPGELKDMVCSPGGTTIEAVRVLEERGFRSAVIEAMAKCMEKSEKLSKS
>NZ_AP019630.1|WP_047061223.1|975164_976268_+|diguanylate-cyclase-AdrA
MMNDETYYNKKRIREEWNLTLSQDDPHRAGIQFARRVRLARAVGLAAMFFPVAGMLVTHFLPGGWWLLLVGWSFVWPHFAWQLSCRAASPHQQEIFNLKIDAIIAGLWIGVMGMNALPTAALVMMVGMNMMGSGGCRLFIPGIALTLLSALVTLPLVGKVAVFNPDLVEWGLTLPVLVLYPMLFAWLSHRTAVRLAEHKQRLEMMSTRDGMTGVFNRRHWEMLLRNEFEHCRRDHSTATILLIDIDHFKNINDTWGHDVGDEAIIAITRQLQRSVRSGDAIGRFGGDEFAVIMSQTAAESAIAVMSRLHERLEKLTLPCAPKEALRISVGVAPWGPQFGHYREWLKAADVALYRAKNAGRGRTEVAA
>NZ_AP019630.1|WP_023334671.1|974741_975062_+|phosphate-starvation-inducible-protein-PsiF
MKTTLLVTLLSGLFLVASANAEEKTLTPQQQRMTTCNQQATSQSLKGDARKTYMSDCLKNGAAKPAEKSLTPQQQKMRECNAKATEQSLKGDDRSKFMSACLKKKV
>NZ_AP019630.1|WP_048978954.1|981974_985106_-|exonuclease-subunit-SbcC
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPRLQKVSQAQNDLMTRDTAECLAEVEFEVKGTAYRAFWSQNRARNQPDGNLQAPRVELARCEDGKILADKVTDKLEQTAALTGLDYGRFTRSMLLSQGQFAAFLNARPSDRAELLEELTGTEIYGQISAMVFEKHKAARSVLEKCEAQAAGVVLLSEEQQQQLQQSLQALTDEEKTLLVQQQSQQKDFQWLTRHDELVLEQQRVAAMQQQAQQALTNAAPELAKLQLALPAAQLRPLWEHQQEQTARLTQTQQRIVEVNTRLQAKTALRARIRHTAQRNHEQLQTELKALAQWLVEHERYRLLGQEIAGWRAQFSQLNRDKTQLASLAARMGELRNRLAEMPENALTLTADEVSAAMEQQSRSRTLRQRLTSLHARYQPLQKRLRQSGESVQKAQADQNKLNETLTLRRQQYKEKHQHFLDLKALCEREATIKDLESYRSRLEAGKPCPLCGSSEHPAVAQYQSLELTDNQRRRDALEKEVAALKEEGLLVLGQVNALTQQIQRETDEAQMLSQEEQALTKEWMEACTSLNIALNIQEDITPWMNEQEQYERQLYQLSQRLTLQNQLNEQEVQERQYQQQLTAARQALENTLLSLSLNVPEDGNEAAWLHAREAEFAQWQEKQTQHGVLLERINALKPLLDTLPETNGEEAEPAIPDGWRDVHDECVSLQSQLSAQQQQEKLEQERLQQSQTQFTTALAASCFADRDAFLAALLDDDAIRHLVQLKQSLESQIQQAAALSGQANQQLQAHLSLRPEGLNADAPALQSQLQQLAERLRENTTHQGEIRQQLKQDSDNRQHQLALMQQIEEAARQADDWGYLNALIGSSTGDKFRKFAQGLTLDNLVWLANQQLNRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMKERIPVQIKVKKINGLGYSRLDKEFAVE
>NZ_AP019630.1|WP_048978953.1|985102_986308_-|exonuclease-subunit-SbcD
MRILHTSDWHLGQNFYSKSRAAEHEAFLNWLLETARTHEVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCHLVIVAGNHDSVATLNESRDILAFLNTTVVASAGHAPQILKKRDGTPGAVLCPIPFLRPRDIVQSQAGLSGAEKQQHLLQAITDYYHQQHADACALRGDQPIPVIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIVGGSEHIRYCGSPISLSFDETGKAKSVHLVSFSDGKLHAVETLEVPVTQPLAVLKGDLAAITAQLEQWRGTALNPPVWLDIEITTDDYLHDMQRKIQALTEDLPVEVLLVRRSREQREKILLSAQRETLSELRVEEVFERRLSQEEIDDAKRARLSELFSHTLHALNDEEENA
>NZ_AP019630.1|WP_008503265.1|986495_987185_+|phosphate-response-regulator-transcription-factor-PhoB
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGLQFIKHLKREALTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMTGENPLDMGPTEFKLLHFFMTHPERVYSREQLLNNVWGTNVYVEDRTVDVHIRRLRKALELSGHDRMVQTVRGTGYRFSTRF
>NZ_AP019630.1|WP_048975262.1|987206_988502_+|phosphate-regulon-sensor-histidine-kinase-PhoR
MLERLSWKRLVFELILCCIPAFLLGAFLGHLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPGSGSWEPLLYGLHQMQMRNKKRRRELGSLIKRFRSGAESLPDAVILTTEEGTIFWCNGLAQQLLGLRWPDDNGQNILNLLRYPEFTLYLKKRDFTRPHNLKLNNGRHLEIRVMPYSDKQWLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMQEQTLEGAPREKALHTMREQTHRMEGLVKQLLTLSKIEAAPTLALNETIDVPMMLRVVEREAQTLSHKKHHLTFEVDNTLKVLGSEDELRSAISNLVYNAVNHTPEGTNIVVRWHHAPTGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLDIQSTLGKGTRFSFVIPERLIAKKIA
>NZ_AP019630.1|WP_024906795.1|988911_990231_+|branched-chain-amino-acid-transporter-carrier-protein-BrnQ
MTHHLKSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDGAMPLFIYSLIYFAIVILVSLYPGKLLDTVGNFLAPLKIVALIVLAVAAIVWPAGPISDAMDAYKNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTIWAGLMAGVGLTLLYLALFRLGSDSAMLVDQNANGAAILHAYVQHTFGGAGSMLLAALIFLACLVTAVGLTCACAEFFAQYLPLSYRTLVFILGIFSMAVSNLGLSHLIQVSIPVLTAIYPPCIVLVVLSFTRPWWNNSSRIIAPAMFISLIFGILDGIKASAFAHILPAWTQRLPLSEQGLAWLMPTVVALVLAIIWDRAAGRQVASNAH
>NZ_AP019630.1|WP_029739758.1|990312_991686_+|proline-specific-permease-ProY
MESTNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPSASSFSRYAQENLGPLAGFITGWTYCFEILIVAIADVTAFGIYMGVWFPAVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGIAFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKVFAKTSRRGTPWVTVVVMTVALLFSVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLSPDEAKALKFKVPGGVATTVVGLIFLVFIIALIGYHPDTRISLYVGCAWIVLLLVGWVFKCRRDRQLAEAQ
>NZ_AP019630.1|WP_048978952.1|991825_993643_+|maltodextrin-glucosidase
MLNAWHLPVAPFVKQNKDNLVITLWLAGENQPERVTLRAEIDNEETGLKMHKLRSQPQPGITAWRANIDLNSGQPRRRYSFKLLWNNRQLWFTPQGFSRFPPARLEQFAVDYPDNGPQWVNDQVFYQIFPDRFARSEKRTADQDKIYHHHAAGHDIILKAWDEPLTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDEQFGGDEALLRLRKNTQNEGMRLILDGVFNHSGDSHAWFDRHNQSMGGACHNPDSPQRDWYSFNEEGRALDWLGYASLPKLDFQSPTLVNEIYGSEDSIVRHWLKAPWNMDGWRLDVVHMLGESGGARNNLQHVAGITRSAKAAQPEAFVFGEHFGDARQWLQNDAEDAAMNYRGFTFPLWGFLANTDISYDPNHIDAETCMAWMENYRAGLSHQQQLRMFNQLDSHDTARFKSLLGKDAARLPLAVTWLFTWPGVPCIYYGDEVGLDGNNDPFCRKIFPWEPEKHDKVLFSLYQRLAKLRKQSLALRYGGCQVVYAHDNVVVFARVYNQQRVLVAINRGEACEVVLDDSPLLKVAAWKNKEGKATIQDGVLALPAVSATIWFGS
>NZ_AP019630.1|WP_048978951.1|993731_996347_+|DUF2339-domain-containing-protein
MDELYILGCLFLVFALVVAPVLAVIGFNRSTAARQEIARLRQRIEALEQRDVPESAPEPVQPTAPVAVTAPVVEDAPAPVDPWRSDTPAAVAEPAPAPTPAAKQPSAFGGILTSLARWFMQGNPLAKLGILLLFLGLSFLLRYTVEHSLFPLELRLVATALFAIVLLAVGWRLRHKQRVYALILQGGATGVLYLTVFGAFRLWQMLPMTLAFALLVVICAASVGLAVLQKALSLAMLASLGGYLAPLLLSTGGGSFVALFSFYLLLSIGILAISIWQHWRELNLLGLLFTFGVGGLWGLNDYQPEDYWICQLFLIANTLIFGVLSVALSLRAQEKGKQIIDGVLLFAPPLIGFGMQYGMTRHWEYGPALSALGYGAFYLTLASLALRRYPSLGRPLVMAALAIGGGFATLAIPLALSARWTAMAWALEGLGILWLGVQQHQRRMCYSGTALLVLALGSALWAQTNGVTSLSLLLIFTILSLCWLAAAWLWRTLFLPVSRALLAGGLLFWLVALLGASRLALTKELPILAGVLALTAASVWGWRQAAARLAWRELDASKWLLWPVMLLMVGYQLWHQQIVAAGWSNLAWCVALPAALMLLRRDGERLPPRIAMGLHLSLFWMILLALAAELYWFTRSLPWGMAAWGSGLAMAAGGGVIMGLSAAVRRRGWPFREWPALYACLAPIPAVVALLVLLVVTNFQDGVVYRQTWLPLVNPLEEGAAFALLGLVVFYRAVDRYYPAWLSQARPWPAVAMMAFGFWWLNGALMRALAWYGDVAWNMASLWDSRLIQTSFALFWMLSALVVMIHATRRASRQEWLCGAALLGVVMVKLMLVDSAGGGGLSRAVAFIGVAILVLIVGYFSPLPPKTGDEK
>NZ_AP019630.1|WP_143345971.1|996343_997729_+|DUF3999-domain-containing-protein
MKWMKAVACTALLALSGPAFCDEGQTESPRDYAFGLSLDTSVPSQWYRVMLPLAVYEQSTSPDLHDVRVFNQSGEAVPFSLVSATRPQVPAQSTALRLFPLDASPLAASRGAGDSDKILLRSGSGVEIVLEGQKAAAAGQHYLLTLPEQATGEIAISQLQLLWNTPQTPWQGTASVYYSEDLKRWYTLREDMPLLDVVSGQDRLKLDRIDTDTVLSPDANRYLMVVLNAQSQGITLTGVNAISAPAQAAPEAIDLEGEGEQLSTSEAQWHWARPQPLSAVSLSLNGDGVLPVEIAWRSTEKDAWHPLKKEVLYRLEGKTSPPVSLNGGLVQAVKITTLNSRLPEYLPSVTGHRDRYDLVFNAQGKAPYVLAWGNGAAKPASVEPGMLIPADLRKTYDMANLPQADILDDVALGGQERLTATSAAERESRMNTLLVWGVLIAGVILLAGMAWRIWRETQRKA
>NZ_AP019630.1|WP_014168840.1|997772_998375_-|peroxiredoxin
MVLVTRPAPDFTAAAVLGNGEIVENFNFKQHTNGKATVLFFWPMDFTFVCPSELIAFDKRYEEFQKRGVEVVGVSFDSEFVHNAWRNTPVDKGGIGAVKYAMVADIKREIQQAYGIEHPDAGVALRGSFLIDANGIVRHQVVNDLPLGRNIDEMLRMVDALQFHEEHGEVCPAQWEKGKEGMNASPDGVAKYLSENVSSL

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Crispr_ID: NZ_AP019630_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019630_3

1276334-1276460

Orphan

Consensus_repeat	Method
CCCGTGGGAGAGGGTTGGGGTGAGGGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019630_3

>merge|NZ_AP019630|3|1276334-1276460|CRISPRCasFinder
CCCGTGGGAGAGGGTTGGGGTGAGGGCATCAGGCTGCACATGGTAAAAGCAAAACGGCAACCACGTTGCCGTTTTTAGTGTTTGCCCCCTCTCCCCGTGGGAGAGGGGTGGGGTGAGGGCATCAGGC

>NZ_AP019630|3|3|1276334-1276460|CRISPRCasFinder
CCCGTGGGAGAGGGTTGGGGTGAGGGCATCAGGC	TGCACATGGTAAAAGCAAAACGGCAACCACGTTGCCGTTTTTAGTGTTTGCCCCCTCTC
CCCGTGGGAGAGGGGTGGGGTGAGGGCATCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019630.1\|WP_023310756.1\|1278915_1279656_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_AP019630.1\|WP_014883002.1\|1278241_1278916_-\|glutamate/aspartate-ABC-transporter-permease-GltK	unknown	unknown	gnl\|CDD\|185062
NZ_AP019630.1\|WP_048980735.1\|1281070_1282609_-\|apolipoprotein-N-acyltransferase	unknown	unknown	gnl\|CDD\|234721
NZ_AP019630.1\|WP_029740134.1\|1270753_1271419_-\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NZ_AP019630.1\|WP_039261260.1\|1272442_1273012_-\|LPS-assembly-lipoprotein-LptE	unknown	unknown	gnl\|CDD\|236762
NZ_AP019630.1\|WP_143345992.1\|1265521_1266634_-\|endolytic-peptidoglycan-transglycosylase-RlpA	unknown	unknown	gnl\|CDD\|236733
NZ_AP019630.1\|WP_023310748.1\|1269695_1270163_-\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	unknown	unknown	gnl\|CDD\|129349
NZ_AP019630.1\|WP_014883001.1\|1277516_1278242_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_AP019630.1\|WP_032638848.1\|1267765_1269667_-\|peptidoglycan-DD-transpeptidase-MrdA	unknown	unknown	gnl\|CDD\|236761
NZ_AP019630.1\|WP_008501053.1\|1284046_1285093_-\|PhoH-family-protein	unknown	unknown	gnl\|CDD\|224616
NZ_AP019630.1\|WP_048980733.1\|1283582_1284050_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|234575
NZ_AP019630.1\|WP_008501049.1\|1279812_1280718_-\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236763
NZ_AP019630.1\|WP_048980738.1\|1273026_1275609_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NZ_AP019630.1\|WP_021242574.1\|1282614_1283493_-\|CNNM-family-magnesium/cobalt-transport-protein-CorC	unknown	unknown	gnl\|CDD\|185050
NZ_AP019630.1\|WP_143346205.1\|1271411_1272443_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235511
NZ_AP019630.1\|WP_023334893.1\|1270166_1270484_-\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|183184
NZ_AP019630.1\|WP_048980731.1\|1285256_1286681_-\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl\|CDD\|237673
NZ_AP019630.1\|WP_048980791.1\|1275823_1276306_+\|zinc-ribbon-containing-protein	unknown	unknown	gnl\|CDD\|182915
NZ_AP019630.1\|WP_143345993.1\|1286816_1287992_+\|2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol-hydroxylase	unknown	unknown	gnl\|CDD\|181199
NZ_AP019630.1\|WP_023310746.1\|1266650_1267763_-\|peptidoglycan-glycosyltransferase-MrdB	unknown	unknown	gnl\|CDD\|182737

Protein	Function_ID	Function_description	E-value
NZ_AP019630.1\|WP_023310756.1\|1278915_1279656_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.50884e-66
NZ_AP019630.1\|WP_014883002.1\|1278241_1278916_-\|glutamate/aspartate-ABC-transporter-permease-GltK	gnl\|CDD\|185062	PRK15107, PRK15107, glutamate/aspartate ABC transporter permease GltK.	1.08051e-145
NZ_AP019630.1\|WP_048980735.1\|1281070_1282609_-\|apolipoprotein-N-acyltransferase	gnl\|CDD\|234721	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed.	0
NZ_AP019630.1\|WP_029740134.1\|1270753_1271419_-\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	6.25599e-86
NZ_AP019630.1\|WP_039261260.1\|1272442_1273012_-\|LPS-assembly-lipoprotein-LptE	gnl\|CDD\|236762	PRK10796, PRK10796, LPS-assembly lipoprotein RlpB; Provisional.	1.38198e-110
NZ_AP019630.1\|WP_143345992.1\|1265521_1266634_-\|endolytic-peptidoglycan-transglycosylase-RlpA	gnl\|CDD\|236733	PRK10672, PRK10672, endolytic peptidoglycan transglycosylase RlpA.	0
NZ_AP019630.1\|WP_023310748.1\|1269695_1270163_-\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	gnl\|CDD\|129349	TIGR00246, Ribosomal_RNA_large_subunit_methyltransferase_H, rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA. [Protein synthesis, tRNA and rRNA base modification].	1.15984e-97
NZ_AP019630.1\|WP_014883001.1\|1277516_1278242_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	9.56625e-157
NZ_AP019630.1\|WP_032638848.1\|1267765_1269667_-\|peptidoglycan-DD-transpeptidase-MrdA	gnl\|CDD\|236761	PRK10795, PRK10795, penicillin-binding protein 2; Provisional.	0
NZ_AP019630.1\|WP_008501053.1\|1284046_1285093_-\|PhoH-family-protein	gnl\|CDD\|224616	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms].	3.08069e-174
NZ_AP019630.1\|WP_048980733.1\|1283582_1284050_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|234575	PRK00016, PRK00016, metal-binding heat shock protein; Provisional.	1.98965e-68
NZ_AP019630.1\|WP_008501049.1\|1279812_1280718_-\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236763	PRK10797, PRK10797, glutamate and aspartate transporter subunit; Provisional.	0
NZ_AP019630.1\|WP_048980738.1\|1273026_1275609_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_AP019630.1\|WP_021242574.1\|1282614_1283493_-\|CNNM-family-magnesium/cobalt-transport-protein-CorC	gnl\|CDD\|185050	PRK15094, PRK15094, magnesium/cobalt transporter CorC.	0
NZ_AP019630.1\|WP_143346205.1\|1271411_1272443_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	5.92994e-149
NZ_AP019630.1\|WP_023334893.1\|1270166_1270484_-\|ribosome-silencing-factor	gnl\|CDD\|183184	PRK11538, PRK11538, ribosome silencing factor.	3.4468e-69
NZ_AP019630.1\|WP_048980731.1\|1285256_1286681_-\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl\|CDD\|237673	PRK14325, PRK14325, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NZ_AP019630.1\|WP_048980791.1\|1275823_1276306_+\|zinc-ribbon-containing-protein	gnl\|CDD\|182915	PRK11032, PRK11032, zinc ribbon-containing protein.	1.96533e-112
NZ_AP019630.1\|WP_143345993.1\|1286816_1287992_+\|2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol-hydroxylase	gnl\|CDD\|181199	PRK08020, ubiF, 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed.	0
NZ_AP019630.1\|WP_023310746.1\|1266650_1267763_-\|peptidoglycan-glycosyltransferase-MrdB	gnl\|CDD\|182737	PRK10794, PRK10794, rod shape-determining protein RodA.	0

>NZ_AP019630.1|WP_048980791.1|1275823_1276306_+|zinc-ribbon-containing-protein
MNKVAQFYRELVATLTERLRNGERDIDALVEQARARVTQTGELTRTEVEEVTRAVRRDLEEFARSYQESQEEVTDSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVVGLGNLVCENCHHHFAVYTPDVLPLCPKCGHDQFQRRPFEP
>NZ_AP019630.1|WP_048980738.1|1273026_1275609_-|leucine--tRNA-ligase
MQEQYRPEEIESKVQQHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDNLDHWPDTVKTMQRNWIGRSEGVEITFNVENYDQTLTVYTTRPDTFMGATYLAVAAGHPLAQKAAENNPELAAFIDECRNTKVAEADMATMEKKGVATGFYAKHPLTGEAIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFATKYSLPIKAVILAADGSEPDLSEQALTEKGTLFNSGEFSGLSFEEGFNAIADKLASLGVGERKVNFRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPEDQLPVILPEDVVMDGITSPIKADPEWAKTTVNGQPALRETDTFDTFMESSWYYARYTCPQYQDGMLDSDAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGANGERNWVSPVDAIVERDEKGRIVKAKDAEGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTALGNAPALNAAALTEDQQALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAPQDGEQDRALMREALLAVVRMLNPFTPHVSFTLWQELKGEGDIDNAPWPQADEAAMVENTTLVVVQVNGKVRGKITVAVDATEEQVRERAGQEPLVAKYLEGVTVRKVIYVPGKLLNLVVG
>NZ_AP019630.1|WP_039261260.1|1272442_1273012_-|LPS-assembly-lipoprotein-LptE
MRQLATILLSLAVLVTAGCGWHLRNTTAVPAEMKTMIFDSSDPNGPLSRAVRNQLRLNGVELVEKQTLRQDVPSLRIIGGGLSRDTASIFQDGRTAEYQMVLTVNAAVLIPGKDIYPISTKVFRSFFDNPQTALAKDAEQQIIINEMYDKAAEQLIRKLPGIAASTRQGSDIVEKPVAGTLPAANSLGK
>NZ_AP019630.1|WP_143346205.1|1271411_1272443_-|DNA-polymerase-III-subunit-delta
MIRLYPEQLRAQLKEGLRAAYLLLGNDPLLLQESLDAVRHEAASQGFDEHHTVQLDNNTDWNALFSLCQAMSLFASRQTIQILLPENGPNAAINEQLATLVSLLHSDLLLIVRGNKLTKAQENAAWFTQLAAHAVQVTCQTPEQAHLPKWVAARAKQNNLQLDDAANQLLCYCYEGNLLALAQALDRLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLSAKSKRAMHILQQLRLEGSEPVILLRTLQRELLLLITLKRQSAHTPLRSLFDKHRVWQNRRALITEAVNRLGHEQLRQAVQLLMRAELTLKQDYGQSVWAELESLSLLLCHKALTDVFIDG
>NZ_AP019630.1|WP_029740134.1|1270753_1271419_-|nicotinate-nucleotide-adenylyltransferase
MDSMHSLQALYGGTFDPVHYGHLKPVEILANLIGLQRVTIMPNNVPPHRPQPEATSEQRKEMLALAIADKPLFRLDERELRRDTPSWTSQTLQEWRAEQGPDQPLAFIIGQDSLLNFPTWHQYETILENSHLLVCRRPGYPLTMREEQYQQWLEDHLTDNVEDLHNQPAGKIYLAETPWFDISATLIRERLQQGLACDDLLPTPVLAYIHAHGLYQKSADE
>NZ_AP019630.1|WP_023334893.1|1270166_1270484_-|ribosome-silencing-factor
MQGKALQDFVIDKIDDLKGQDIIAIDVKGKSSITDCMIICTGTSTRHVVSIADHVVQESRAAGLLPLGVEGEATADWVVVDLGDVIVHVMQDESRRLYELEKLWG
>NZ_AP019630.1|WP_023310748.1|1269695_1270163_-|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH
MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELVEIPAGKRGKNADIKRILDKEGELMLAAAGKNRIVTLDIPGKPWDTPQLAQELERWKQDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE
>NZ_AP019630.1|WP_032638848.1|1267765_1269667_-|peptidoglycan-DD-transpeptidase-MrdA
MKLQNSFRDYTAESALFVRRALVAFTGILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGTPLALNRTIYQIEMMPEKVDNVQDTLEALKSVVDLNDDDIAAFKKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVSKINDKDVDRLDKDGKLANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDVYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGILAMVSMPSYDPNLFVDGISSKDYSGLLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVINRNTSLFDPGWWQLPGSDKRYRDWKKWGHGHLNVTKSLEESADTFFYQVAYDMGIDRLSEWMSKFGYGHYTGVDLSEERSGNMPTREWKLKRFKKPWYQGDTIPVGIGQGYWTATPLQMNKAMMILINDGVVKVPHLLQSTVEDGKKVPWNQPHEAPVGDIHSGFWEIAKDGMYGVANRPNGTAHKYFAGTPYKVAAKSGTAQVFGLKANETYNAHRIAERLRDHKLMTAFAPYDNPQVAVAMILENGGAGPAVGTIMRQILDHIMLGDNNTELPAENPAAAAAEDQ
>NZ_AP019630.1|WP_023310746.1|1266650_1267763_-|peptidoglycan-glycosyltransferase-MrdB
MTDNPNKKSLWDKIHIDPAMLLILLALLVYSALVIWSASGQDIGMMERKIGQIAMGLIIMVVMAQIPPRVYEGWAPYLYIFCIILLVAVDAFGAISKGAQRWLDLGVVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTAIALVLIFLPTLLVAAQPDLGTSILIALSGLFVLFLSGLSWRLIGIAVVLIAAFIPILWFFLMHDYQRQRVMMLLDPETDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVGILILLALYVLLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGVPLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV
>NZ_AP019630.1|WP_143345992.1|1265521_1266634_-|endolytic-peptidoglycan-transglycosylase-RlpA
MRKQWLGICIAASLLAACTSDDGQQQATVAPPQPAVCNGPIVEISGADPVYEPLNASANQDYQRDGKSYKIVQDPSRFSQAGFAAIYDAEPGSNLTASGEAFDPMQLTAAHPTLPIPSYARITNLANGRMVVVRINDRGPYGNDRVISLSRASADRLNTSNNTKVRIDPIIVAQDGSLSGPGTACTTVAKQTYALPDRPNLDGGMGSVSSPAEPAQPGGEIRPISNDTLQSEDSTGAPVKSSGFLGAPTTLASGVLEGSEPTPAPAPVAAPATQPAPVTAPAATQSAAVTAPAAASGSYVVQVGAVSDQARARQYQQRLSQQFGVPGRVEQNGAVWRIQMGPFASKSQAASLQQRLQNEAQLQSFIAVAK
>NZ_AP019630.1|WP_014883001.1|1277516_1278242_-|amino-acid-ABC-transporter-ATP-binding-protein
MISLKNVSKWYGHFQVLTDCSTEVKKGDVVVVCGPSGSGKSTLIKTVNGLEPVQQGEIVVNGTKVNDKKTNLAQLRSHVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKKASREKGLKLLERVGLSAHADKFPAQLSGGQQQRVAIARALCMDPVAMLFDEPTSALDPEMINEVLDVMVELAHEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKEEFFANPKSERAKDFLAKILH
>NZ_AP019630.1|WP_014883002.1|1278241_1278916_-|glutamate/aspartate-ABC-transporter-permease-GltK
MYEFDWSSIVPSMPYLLDGLVITLKITVIAIIIGIVWGTLLAVMRLSSFKPLAWFATAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMQLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMVLFAGAVYFVISLSASLLVSWLKKRTV
>NZ_AP019630.1|WP_023310756.1|1278915_1279656_-|amino-acid-ABC-transporter-permease
MSIDWNWGIFLQQAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSTLGTLYVELFRNVPLIVQFFTWYLVIPELLPENIGMWFKSELDPNVQFFVSSMMCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMNLVERKIRLPGNLGGK
>NZ_AP019630.1|WP_008501049.1|1279812_1280718_-|amino-acid-ABC-transporter-substrate-binding-protein
MQLRKLATAMLVMGMSAGVVHAEDAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNTQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQKQAAFSDTIFVVGTRLLTKKGGEIKDFADLKGKAVVVTSGTTSEVLLHKLNDEKKMDMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWDIVGTAQSKEAYGCMLRKDDPQFKKLIDDTIAQVQTSGEAEKWFDKWFKNPIPPKNLNMNFELSDDMKALFKSPNDKALN
>NZ_AP019630.1|WP_048980735.1|1281070_1282609_-|apolipoprotein-N-acyltransferase
MAFAPLLERQRIRLLLALLLGASGTLAFSPYDIWPAAILSLMGLQGLTLNRRPVQAAAIGYFWGLGLFGSGINWVYVSIAQFGGMPGPVNVFLVVLLAAYLSLYTGLFAGILSRLWPKTTWLRVAIAAPVVWQITEFLRGWVLTGFPWLQFGYSQIDGPLKGLAPVMGVEAINFLLMVVCGLLVLALVQRCWKPLAVALVLFALPFPLRYIQWFTPEPERTLQVSMVQGNIPQSMKWDEKELLNTLKIYANATEEVMGKSQLIIWPESAIPDLEINQQPFLNMMNDLLLAHGSTLITGIVDARLNQQNRYDTYNSIITLGKDSEYSYHSTDRYNKNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYVQPQLHAHGLALTAAICYEIILGEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRSLELARPLLRSTNNGITAVIGPQGEIQAMIPQFTREVLTTKVTPTTGLTPYARTGNWPLWILTVLFGFGAVLMSLRQRRK
>NZ_AP019630.1|WP_021242574.1|1282614_1283493_-|CNNM-family-magnesium/cobalt-transport-protein-CorC
MSDDNSHSSDTTTSKKGFFSLILNQLFHGEPKNRDELLELIRDSGQNDLIDEDTREMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMEKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEEDIDFRQLSRHTWTVRALASIEDFNDAFGTHFSDEEVDTIGGLVMQAFGHLPARGETVDIDGYQFKVAMADSRRIIQVHVRTPDDSPVPKLED
>NZ_AP019630.1|WP_048980733.1|1283582_1284050_-|rRNA-maturation-RNase-YbeY
MSQVILDLQLACEDNSGMPDEAQFQKWLDGVIPQFQEESEVTIRLVDEAESHELNLTYRGKDKPTNVLSFPFEAPPGIEMPLLGDLIICRQVVEQEAKEQQKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMESLETEIMLALGYEDPYIAEKE
>NZ_AP019630.1|WP_008501053.1|1284046_1285093_-|PhoH-family-protein
MNIDTREISLEPADNARLLSLCGPFDDNIKQLERRLGIEINRRDNHFKLTGRPICVNAAADILRSLYVDTSPMRGEIQDIEPEQIHLAIKEARVLEQSAESVPDYGKAINIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTGKTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNSKAVITGDVTQIDLPRSTKSGLRHAIEVLAEVDEISFNFFHSEDVVRHPVVARIVNAYEAWEEADQKRKAELAAERKREAQEQEQK
>NZ_AP019630.1|WP_048980731.1|1285256_1286681_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MTKKLHIKTWGCQMNEYDSSKMADLLDSTHGYQLTENAKDADVLLLNTCSIREKAQEKVFHVLGRWKLLKRKNPDLIIGVGGCVASQEGKLIRQRAPYVDIVFGPQTLHRLPEMINQVRGNRSPVVDVSFPEIEKFDRLPEPRADGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPADDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGTTGSFAELLRLVAAIDGIDRIRFTTSHPMEFTDDIIDVYRDTPELVSFLHLPIQCGSDRVLNLMGRPHTVLEYKSTIRKLREARPDIQISSDFIVGFPGETADDFERTMKLIGEVNFDVSYSFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQANAWSRRMLGTVQRILVEGTSRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEIVEVLTNSLRAKLVRTEDEMGLRIAESPESVISRTRKENDSGVGIYQP
>NZ_AP019630.1|WP_143345993.1|1286816_1287992_+|2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol-hydroxylase
MTLLHTEVAVVGGGMVGGALALGLAQQGFEVTVIEQAAPPAFDPASKPDVRISAISAASVDLLRGLGVWEAVLAMRAHPYSRLETWEWENAHVAFDAAELKLPRMGYMVENNVLQQALWQALEAHPKVTLRVPASIKALHPQESGYSLTLDSGDELAVKLVVGADGANSQVRQMAGIGVHAWQYEQSCMLITVECEHAPGESTWQHFTPNGPHAFLPLFDNWASLVWYDKPARIRQLQGLSMEQLQREIRLHFPGRLGNVTPVAAGAFPLTRRHALQYAREGLALVGDAAHTIHPLAGQGVNLGYRDVDALLDVLSSARGHAENWASHQILKRYQTRRMADNFIMQSGMDLFYAGFSNDLAPVRILRNIGLMAAERAGGLKRQALKYALGL

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Crispr_ID: NZ_AP019630_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019630_4

2763854-2763952

Orphan

Consensus_repeat	Method
GGTGAATCTCCTTCACCACCACCTGGTGAATCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019630_4

>merge|NZ_AP019630|4|2763854-2763952|CRISPRCasFinder
GGTGAATCTCCTTCACCACCACCTGGTGAATCTGCTGCACTACCCGGTGAACCACTTTCACCACCTGGTGAATCTCCTTCACCACCACCTGGTGAATCT

>NZ_AP019630|4|4|2763854-2763952|CRISPRCasFinder
GGTGAATCTCCTTCACCACCACCTGGTGAATCT	GCTGCACTACCCGGTGAACCACTTTCACCACCT
GGTGAATCTCCTTCACCACCACCTGGTGAATCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019630.1\|WP_143346064.1\|2759488_2759641_-\|Hok/Gef-family-protein	unknown	unknown	gnl\|CDD\|182063
NZ_AP019630.1\|WP_143346072.1\|2764294_2764720_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368819
NZ_AP019630.1\|WP_172620301.1\|2760859_2761069_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019630.1\|WP_143346076.1\|2765924_2766116_+\|DUF1482-family-protein	unknown	unknown	gnl\|CDD\|369331
NZ_AP019630.1\|WP_143346074.1\|2765080_2765461_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_AP019630.1\|WP_143346065.1\|2760527_2760863_-\|ead/Ea22-like-family-protein	unknown	unknown	gnl\|CDD\|379401
NZ_AP019630.1\|WP_073001981.1\|2769350_2769590_+\|DUF4060-family-protein	unknown	unknown	gnl\|CDD\|372542
NZ_AP019630.1\|WP_143346207.1\|2769758_2770019_+\|excisionase	unknown	unknown	gnl\|CDD\|116439
NZ_AP019630.1\|WP_172620284.1\|2761931_2762627_-\|DUF1627-domain-containing-protein	unknown	unknown	gnl\|CDD\|369520
NZ_AP019630.1\|WP_143346078.1\|2766910_2768857_+\|exodeoxyribonuclease-VIII	unknown	unknown	gnl\|CDD\|236615
NZ_AP019630.1\|WP_143346067.1\|2761086_2761449_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019630.1\|WP_143346070.1\|2762638_2763379_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|183482
NZ_AP019630.1\|WP_143346062.1\|2757845_2758409_-\|DUF1133-family-protein	unknown	unknown	gnl\|CDD\|148278
NZ_AP019630.1\|WP_143346075.1\|2765779_2765974_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019630.1\|WP_143346068.1\|2761445_2761736_-\|DUF977-family-protein	unknown	unknown	gnl\|CDD\|310626
NZ_AP019630.1\|WP_143346073.1\|2764719_2764971_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374243
NZ_AP019630.1\|WP_073001979.1\|2769070_2769373_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019630.1\|WP_143346077.1\|2766181_2766448_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019630.1\|WP_143346063.1\|2758405_2758711_-\|DUF968-domain-containing-protein	unknown	unknown	gnl\|CDD\|374800
NZ_AP019630.1\|WP_172620283.1\|2760351_2760525_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP019630.1\|WP_143346064.1\|2759488_2759641_-\|Hok/Gef-family-protein	gnl\|CDD\|182063	PRK09759, PRK09759, type I toxin-antitoxin system toxin HokA.	3.74355e-13
NZ_AP019630.1\|WP_143346072.1\|2764294_2764720_-\|hypothetical-protein	gnl\|CDD\|368819	pfam06254, YdaT_toxin, Putative bacterial toxin ydaT. YdaT_toxin is a family of putative bacterial toxins that are neutralized by the putative antitoxin YdaS, UniProtKB:P76063, family pfam144549.	1.77295e-08
NZ_AP019630.1\|WP_143346076.1\|2765924_2766116_+\|DUF1482-family-protein	gnl\|CDD\|369331	pfam07358, DUF1482, Protein of unknown function (DUF1482). This family consists of several Enterobacterial proteins of around 60 residues in length. The function of this family is unknown.	4.1337e-13
NZ_AP019630.1\|WP_143346207.1\|2769758_2770019_+\|excisionase	gnl\|CDD\|116439	pfam07825, Exc, Excisionase-like protein. The phage-encoded excisionase protein (Xis) is involved in excisive recombination by regulating the assembly of the excisive intasome and by inhibiting viral integration. It adopts an unusual 'winged'-helix structure in which two alpha helices are packed against two extended strands. Also present in the structure is a two-stranded anti-parallel beta-sheet, whose strands are connected by a four-residue 'wing'. During interaction with DNA, helix alpha2 is thought to insert into the major groove, while the wing contacts the adjacent minor groove or phosphodiester backbone. The C-terminal region of Xis is involved in interaction with phage-encoded integrase (Int), and a putative C-terminal alpha helix may fold upon interaction with Int and/or DNA.	1.04447e-10
NZ_AP019630.1\|WP_143346074.1\|2765080_2765461_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.98564e-08
NZ_AP019630.1\|WP_073001981.1\|2769350_2769590_+\|DUF4060-family-protein	gnl\|CDD\|372542	pfam13269, DUF4060, Protein of unknown function (DUF4060). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length. There are two conserved sequence motifs: VEVV and SYVAT.	4.93349e-23
NZ_AP019630.1\|WP_172620284.1\|2761931_2762627_-\|DUF1627-domain-containing-protein	gnl\|CDD\|369520	pfam07789, DUF1627, Protein of unknown function (DUF1627). This is a group of sequences found in hypothetical proteins predicted to be expressed in a number of bacterial species. The region in question is approximately 150 amino acid residues long.	5.66734e-15
NZ_AP019630.1\|WP_143346070.1\|2762638_2763379_-\|ATP-binding-protein	gnl\|CDD\|183482	PRK12377, PRK12377, putative replication protein; Provisional.	1.5049e-145
NZ_AP019630.1\|WP_143346062.1\|2757845_2758409_-\|DUF1133-family-protein	gnl\|CDD\|148278	pfam06576, DUF1133, Protein of unknown function (DUF1133). This family consists of a number of hypothetical proteins from Escherichia coli O157:H7 and Salmonella typhi. The function of this family is unknown.	4.02118e-87
NZ_AP019630.1\|WP_143346065.1\|2760527_2760863_-\|ead/Ea22-like-family-protein	gnl\|CDD\|379401	pfam13935, Ead_Ea22, Ead/Ea22-like protein. This family contains phage proteins and bacterial proteins that are likely to represent integrated phage proteins. This family includes the Lambda phage Ea22 early protein as well as the Bacteriophage P22 Ead protein.	1.56387e-08
NZ_AP019630.1\|WP_143346068.1\|2761445_2761736_-\|DUF977-family-protein	gnl\|CDD\|310626	pfam06163, DUF977, Bacterial protein of unknown function (DUF977). This family consists of several hypothetical bacterial proteins from Escherichia coli and Salmonella typhi. The function of this family is unknown.	2.36487e-19
NZ_AP019630.1\|WP_143346073.1\|2764719_2764971_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	3.77032e-18
NZ_AP019630.1\|WP_143346063.1\|2758405_2758711_-\|DUF968-domain-containing-protein	gnl\|CDD\|374800	pfam16786, RecA_dep_nuc, Recombination enhancement, RecA-dependent nuclease. REF is a family of P1-like phage RecA-dependent nucleases. It does not appear to act as a positive RecA regulator. It is a new kind of enzyme, a RecA-dependent nuclease.	1.61817e-07
NZ_AP019630.1\|WP_143346078.1\|2766910_2768857_+\|exodeoxyribonuclease-VIII	gnl\|CDD\|236615	PRK09709, PRK09709, exodeoxyribonuclease VIII.	1.43696e-41

>NZ_AP019630.1|WP_143346070.1|2762638_2763379_-|ATP-binding-protein
MKNAGSLIERISRLAPAGVQPKFTSAEELMAWQREEGIKRAAEVDRLNRQARAEKILGRSGIQDLHRNCSFSNYDVACAGQKQALTYAKSYAQNFGIGFASFVFTGNPGTGKNHLAAAIGNYLLKQDRTVLVVTVADLTLRARACYDNGKSEADLLNDLCGVDLLVIDEVGVQRDTRGEKVLLNQIIDRRLAALKPVGILTNLNHQVLTETLGARVIDRLRMDGGLWVNFDWGSYRGNVSHLRVVK
>NZ_AP019630.1|WP_172620284.1|2761931_2762627_-|DUF1627-domain-containing-protein
MENILDALKAMKKATARDVAARLQIEPQAALDMLREHEGRFEAVQSNGYWWATKTDDVPQKAAPQKAVPPVRITPFDLKGLLVEKGPLQADQLAKITGATAKGVATMLTNLVTKGEVSREKVGNKFVYSVPVATDDEPTAAATVDSVPETGAPPVSPVQADPVPAAKTTAEIVQDIPAFTARADDLVIPSSRFISQEIRRTRTKLANLEKLQVTVRELRRHKKLLAGLRDA
>NZ_AP019630.1|WP_143346068.1|2761445_2761736_-|DUF977-family-protein
MPRPKTNEERDMIVSEIIELAKKHGRITTKDVAAMYGLHRTTAEKYMRMATVKGQLVRHGRLGIFRDYQTTIDFDMKRFTHKLSAAMEELRKGVQS
>NZ_AP019630.1|WP_143346067.1|2761086_2761449_-|hypothetical-protein
MKREPKKTVKIKRFRYSLDWFTVDDVECEVGNGFSYEMQFRLGAWYLMGKYYDYKAEQWREDCSKSFQLERPADAVIELGDSLRAFSRLHNCDQLTKHLSKLLKDVAARIAIREEAGAAQ
>NZ_AP019630.1|WP_172620301.1|2760859_2761069_-|hypothetical-protein
MTNRELVDAAIELAGEFYAMQGYSHLPGFKYWQSPHPHERLCFEMACVAFETIRGSDVMDAVSDLEDEE
>NZ_AP019630.1|WP_143346065.1|2760527_2760863_-|ead/Ea22-like-family-protein
MSNIDKRALREAAEKALPAMKRLLMMPNDELFDEALLNVDGDVDAANAFNLLAGPETVLALLDELEVVNELFLRAKALMYQSGGTPIENSLNPIDAWLYDAERAAAAGKGE
>NZ_AP019630.1|WP_172620283.1|2760351_2760525_-|hypothetical-protein
MAERWKIYLLIAFIGITSTPVSMAAAKIDVPIWAMIVGHCGMMIVGFIAAEMGRTNQ
>NZ_AP019630.1|WP_143346064.1|2759488_2759641_-|Hok/Gef-family-protein
MRGSAVLCLVVVCITILIFIWMVRGSLCELHIKQGNTELSAYLAYEVEAR
>NZ_AP019630.1|WP_143346063.1|2758405_2758711_-|DUF968-domain-containing-protein
MSKTKAEKLHLARVAALCCVVCRNEGLGDTPAEIHHCSKGTGLSVRADNFHVIPLCAIHHRQGGYGVAVHAGRQTWEKNFGTEAELLEQVRAELGMSEVEL
>NZ_AP019630.1|WP_143346062.1|2757845_2758409_-|DUF1133-family-protein
MIYPKATGNPGESMRLSTLESIWIQGKLRMWGRWSYIGDGGVGGSFNQLLATKKITKTAIMEIRRRMKKAGITEGELVKFFEEMMAGKQKSHLAFCTDGEALKIDGVITRTLSDNPRLISMLRQRYLGKGTSKRKMAIRLNERHPEWCLRTCENRVDVWLSMAEFILYQPMREAFGRNVSQPDMTVA
>NZ_AP019630.1|WP_143346072.1|2764294_2764720_-|hypothetical-protein
MEIKHSRIHSVLLAMAAEMGQAAAAALITENYHALGGGRLPLVPGNIWNNQQNIFHRWIEGRTAQQREKIRELVPAILESLPDGLAAQLLAAESVEYRALEAAERSVRDAKSAFMRSRKAIFIQQYRADRNSGPAGGSLFH
>NZ_AP019630.1|WP_143346073.1|2764719_2764971_-|helix-turn-helix-domain-containing-protein
MSGLKKAIKCAGGQAQLARDIGLSRSSVNRWIHKFNGRVPPDHLIQIYQLTGVTPHELRPDLHPTPMSGIPENATPPTKGKSD
>NZ_AP019630.1|WP_143346074.1|2765080_2765461_+|helix-turn-helix-transcriptional-regulator
MKEDNGNTAIAERLTALMKNNHLTQSDMARIAGVSRSAAHRWFSRGSISKDSAAKIAAATNTSLSWILTGDEGNSSSLNEEELALLETFRGLPPIERRNMLAAFQMRLQQLKEFYSTYADPVTRQK
>NZ_AP019630.1|WP_143346075.1|2765779_2765974_+|hypothetical-protein
MDKLIQNTAAQLRNKQVIASYIADEFGDEKMLKQLGEQKAQFVFEVCKSDPVIRSRFNYLLQQH
>NZ_AP019630.1|WP_143346076.1|2765924_2766116_+|DUF1482-family-protein
MTQLFALVLTICSSSIDCTEVVKEVYDSQAECNQAIYEDRLFNGACYPVEKIVRQNKADFAVN
>NZ_AP019630.1|WP_143346077.1|2766181_2766448_+|hypothetical-protein
MEVFNVSTTISQVNADLALFKTSDIVSGVVHIHDNGTTTVIFDGGYVFGEFHCPACAIKNLNTLVCNYIIAHRNCGIEYSDYKRLHLN
>NZ_AP019630.1|WP_143346078.1|2766910_2768857_+|exodeoxyribonuclease-VIII
MSVELKVFGGAYFPKNKALKKSPELKPLVTAVKAGTKAIAEAVMFGKLAAEHPEHIEDYFKVNIWEHREGLPCPEFDVFTSDFFETVAVWNKSEPAAKQQPDTEENWQEDERAEVMKSVRLLDQHSRAACLALFGAVEEITAAQYGQVVDLINDDDGCFQRELAQAIVKEPRVLQLSTDRQEELLAWVRKTMLVSTQWPDIKKALTKWLDTPPAQREPATQPAETKTDSGATLGGGNQTDRSHGMVHNLATLRLETAIGILSVAMDFDIYAIPSEIMRRAKEMESKGTDPRFTAWWNKLRATPGILDYSRAAIIALIKTAPEDLYMRPVDLRAYINRELIESDHASPDQKTIAIACGTVKRETTNDETKPPVPVEAELPAVCPARAAQLDKELNEAFAQGADDKQNDQQLERNLAASRGEFVEGISDPADPKWVDGSAQPKIENLGGGVFSVDALIGGGTSNEGEKQEVPPALSEREVEIAIALNDLLAGRTRQLSANEAADSIAISELSVSDLVFSLMEDVVATECLLSPDLDDDEVQLIGAVILDEWSDDKFARQKVALDAIVEYRKPAPPKVQNPGSVNQELVQKPEAVNHAQISAPLNYHQQLTIAALQGLCSNPAFAHKFDELHLMAMELAESVIVEEKNCAD
>NZ_AP019630.1|WP_073001979.1|2769070_2769373_+|hypothetical-protein
MSKAKEVIACGMWAEFPDVLVTLELCRVFAQRDKRSVPASLRGCARVLADRVENDRLRATLQTMSKSPFPETQISQIRDCIRRMEAALVRKLPNAADKQK
>NZ_AP019630.1|WP_073001981.1|2769350_2769590_+|DUF4060-family-protein
MRLINRSKADPDEAAACEAALREHAERFGDYGKQYTQTLYTIKVGGKKITVEVITRRKSYVARAMNGARRLYRLPGIRG
>NZ_AP019630.1|WP_143346207.1|2769758_2770019_+|excisionase
MKLMSLERWAEERYEDPPQIGTLRRWARNGNIYPPPEKEGTQYKVRPDAIYIRPNKCCKTLNLDQSRHPLKGRLIERIIDGEAGKV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1993097 : 2003173

Enterobacteria_phage(63.64%)

holin,lysis,terminase,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048979547.1\|1993097_1993322_+	DinI family protein	K7PM44	Enterobacteria_phage	3.1e-21	62.3
WP_048979550.1\|1993710_1994322_+	DUF1367 family protein	H6WRY7	Salmonella_phage	1.2e-94	83.0
WP_075204790.1\|1994312_1994519_+	hypothetical protein	H6WRY8	Salmonella_phage	2.3e-26	78.5
WP_048979564.1\|1994521_1994884_+	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	2.6e-49	80.5
WP_048979551.1\|1994880_1995714_+	antitermination protein	K7PKS8	Enterobacteria_phage	5.3e-122	77.6
WP_048979552.1\|1996494_1996713_+\|holin	class II holin family protein	M9NZI9	Enterobacteria_phage	1.7e-32	98.6
WP_048979553.1\|1996696_1997191_+	lysozyme	M9P0E5	Enterobacteria_phage	1.2e-84	89.6
WP_048979554.1\|1997187_1997649_+\|lysis	lysis protein	M9NYX9	Enterobacteria_phage	1.7e-45	66.7
WP_065419808.1\|1998592_1998766_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_143346011.1\|1998844_1999846_+\|terminase	terminase small subunit	I6X6R5	Burkholderia_virus	2.9e-42	47.6
WP_096151461.1\|2001204_2002602_+\|tail	phage tail protein	K7PHF0	Enterobacteria_phage	8.0e-139	58.9
WP_048980395.1\|2002753_2003173_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	57.5

DBSCAN-SWA_2

2086208 : 2096282

Oenococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032657497.1\|2086208_2087423_+	D-galactonate dehydratase family protein	Q6A202	Oenococcus_phage	1.1e-46	29.2
WP_048980514.1\|2087437_2088457_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	1.0e-18	27.0
WP_048980516.1\|2088530_2089898_+	MHS family MFS transporter	NA	NA	NA	NA
WP_048980518.1\|2090117_2091581_+	mannitol dehydrogenase family protein	G8DCZ3	Micromonas_pusilla_virus	5.1e-43	31.0
WP_014883679.1\|2091624_2091828_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	3.4e-14	58.2
WP_048980520.1\|2092116_2092548_+	universal stress protein	A0A1W6JNV4	Morganella_phage	9.7e-19	37.2
WP_023311557.1\|2092581_2093268_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_143346014.1\|2093359_2094106_-	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA
WP_048980524.1\|2094248_2096282_+	peptidyl-dipeptidase Dcp	A0A1V0SIU1	Klosneuvirus	2.1e-18	21.5

DBSCAN-SWA_3

2693696 : 2771076

Enterobacteria_phage(17.78%)

protease,integrase,terminase,head,portal,holin,capsid,tRNA,tail

attL 2729923:2729953|attR 2771204:2771234

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048979885.1\|2693696_2694392_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_039263631.1\|2694458_2696369_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	2.7e-89	32.3
WP_023312193.1\|2696502_2696847_+	RidA family protein	NA	NA	NA	NA
WP_048979887.1\|2696853_2697039_-	YoaH family protein	NA	NA	NA	NA
WP_048979889.1\|2697100_2698426_+	aminodeoxychorismate synthase component 1	S4VNU7	Pandoravirus	2.4e-47	44.7
WP_023312196.1\|2698432_2699011_+	CoA pyrophosphatase	NA	NA	NA	NA
WP_023312197.1\|2699195_2700560_+	L-serine ammonia-lyase	NA	NA	NA	NA
WP_048979890.1\|2700690_2702289_+	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
WP_033145827.1\|2702295_2703855_-	CNNM family cation transport protein YoaE	A0A0R6PEZ3	Moraxella_phage	2.3e-41	44.0
WP_032658500.1\|2704318_2705284_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
WP_008500490.1\|2705330_2706131_+	PTS mannose transporter subunit IIC	NA	NA	NA	NA
WP_006810994.1\|2706143_2706995_+	PTS mannose transporter subunit IID	NA	NA	NA	NA
WP_045887985.1\|2707049_2707508_+	DUF986 domain-containing protein	NA	NA	NA	NA
WP_029741998.1\|2707906_2708473_+	manganese efflux pump MntP	NA	NA	NA	NA
WP_048979894.1\|2708469_2709285_-	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA
WP_075204799.1\|2709350_2711057_-	peptidoglycan glycosyltransferase FtsI	NA	NA	NA	NA
WP_001062678.1\|2711288_2711498_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	1.6e-22	78.1
WP_048979897.1\|2712181_2713171_-	MBL fold hydrolase	NA	NA	NA	NA
WP_048979899.1\|2713192_2713483_-	YebO family protein	NA	NA	NA	NA
WP_006175995.1\|2713557_2713701_-	PhoP/PhoQ regulator MgrB	NA	NA	NA	NA
WP_033145832.1\|2713863_2714103_+	membrane protein	NA	NA	NA	NA
WP_023312208.1\|2714171_2714963_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_048979900.1\|2715142_2716516_+	MFS transporter	NA	NA	NA	NA
WP_014884290.1\|2716566_2717448_-\|protease	protease HtpX	NA	NA	NA	NA
WP_029741991.1\|2717641_2719690_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	5.4e-83	32.7
WP_023336085.1\|2719709_2720396_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_013096117.1\|2720492_2720990_-	GAF domain-containing protein	NA	NA	NA	NA
WP_023312213.1\|2721122_2722406_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_048979903.1\|2722374_2725008_+	PqiB family protein	NA	NA	NA	NA
WP_048979905.1\|2725085_2726528_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_008500472.1\|2726634_2726874_+	YebV family protein	NA	NA	NA	NA
WP_048979907.1\|2726908_2727553_-	protein-serine/threonine phosphatase	Q8HA16	Enterobacteria_phage	2.5e-55	48.6
WP_048979909.1\|2727718_2728660_+	DUF535 domain-containing protein	NA	NA	NA	NA
WP_048979915.1\|2728833_2729730_+	benzoate transporter	M1HZA4	Paramecium_bursaria_Chlorella_virus	9.1e-27	33.7
2729923:2729953	attL	NA	NA	NA	NA
WP_143346037.1\|2730370_2731681_-\|tail	phage tail protein	K7PHF0	Enterobacteria_phage	9.5e-142	60.5
WP_143346038.1\|2731812_2732181_+	hypothetical protein	NA	NA	NA	NA
WP_143346039.1\|2732145_2732787_-	hypothetical protein	G8C7R6	Escherichia_phage	8.0e-110	87.8
WP_143346040.1\|2732783_2733092_-	hypothetical protein	G8C7R5	Escherichia_phage	3.9e-38	72.5
WP_143346041.1\|2733085_2736259_-	host specificity protein J	O64335	Escherichia_phage	0.0e+00	86.7
WP_143346042.1\|2736309_2736900_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	1.5e-94	88.8
WP_143346043.1\|2736933_2737164_-	hypothetical protein	NA	NA	NA	NA
WP_143346044.1\|2737181_2737544_-	hypothetical protein	NA	NA	NA	NA
WP_143346045.1\|2737574_2738285_-	C40 family peptidase	K7PGV2	Enterobacterial_phage	5.7e-141	93.2
WP_143346046.1\|2738286_2739042_-\|tail	phage minor tail protein L	K7PKU0	Enterobacteria_phage	4.2e-134	90.4
WP_073000708.1\|2739038_2739377_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	9.5e-46	72.3
WP_143346047.1\|2739379_2742694_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	60.8
WP_073000714.1\|2742926_2743289_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	6.4e-24	50.9
WP_143346048.1\|2743348_2743801_-\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	9.1e-60	77.7
WP_073000719.1\|2743831_2744236_-	HK97 gp10 family phage protein	Q6UAX1	Klebsiella_phage	1.8e-43	71.8
WP_073000721.1\|2744232_2744622_-	hypothetical protein	Q6UAX2	Klebsiella_phage	3.0e-43	62.0
WP_073000723.1\|2744602_2744947_-\|head	phage head closure protein	Q6UAX3	Klebsiella_phage	7.2e-25	52.7
WP_143346049.1\|2744943_2745270_-\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	2.1e-50	86.1
WP_143346050.1\|2745312_2746524_-\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	4.7e-188	83.5
WP_143346051.1\|2746533_2747382_-\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	6.4e-139	92.5
WP_143346052.1\|2747395_2748700_-\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	3.0e-220	87.8
WP_143346053.1\|2748699_2750442_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	4.1e-140	45.2
WP_047174718.1\|2750395_2750860_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	1.3e-48	62.1
WP_143346055.1\|2751333_2751924_-	hypothetical protein	S4TR53	Salmonella_phage	6.3e-85	73.8
WP_143346056.1\|2751905_2753363_-	glycosyltransferase family 2 protein	K7PKP3	Enterobacterial_phage	7.3e-260	86.0
WP_139295520.1\|2753383_2753626_-	hypothetical protein	NA	NA	NA	NA
WP_143346057.1\|2753672_2754089_-	hypothetical protein	NA	NA	NA	NA
WP_143346058.1\|2754123_2754804_-	hypothetical protein	NA	NA	NA	NA
WP_143346059.1\|2754851_2756372_-	hypothetical protein	NA	NA	NA	NA
WP_073001937.1\|2756391_2756592_-	hypothetical protein	A0A2P0PAP7	Pectobacterium_phage	1.4e-09	34.8
WP_143346060.1\|2756662_2757019_-	serine/threonine protein kinase	A0A088FWP5	Lelliottia_phage	9.7e-33	56.5
WP_073001941.1\|2757018_2757342_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	6.8e-25	54.4
WP_143346061.1\|2757338_2757665_-	hypothetical protein	NA	NA	NA	NA
WP_143346062.1\|2757845_2758409_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	7.1e-54	59.0
WP_143346063.1\|2758405_2758711_-	DUF968 domain-containing protein	Q6V7S4	Burkholderia_virus	6.6e-22	54.3
WP_143346064.1\|2759488_2759641_-	Hok/Gef family protein	NA	NA	NA	NA
WP_172620283.1\|2760351_2760525_-	hypothetical protein	NA	NA	NA	NA
WP_143346065.1\|2760527_2760863_-	ead/Ea22-like family protein	A0A077SLK5	Escherichia_phage	1.1e-12	61.8
WP_172620301.1\|2760859_2761069_-	hypothetical protein	A0A0F6TK62	Escherichia_coli_O157_typing_phage	1.0e-26	79.7
WP_143346067.1\|2761086_2761449_-	hypothetical protein	NA	NA	NA	NA
WP_143346068.1\|2761445_2761736_-	DUF977 family protein	H6WRX9	Salmonella_phage	9.1e-21	57.5
WP_172620284.1\|2761931_2762627_-	DUF1627 domain-containing protein	NA	NA	NA	NA
WP_143346070.1\|2762638_2763379_-	ATP-binding protein	S4TNF5	Salmonella_phage	2.6e-96	67.9
WP_143346071.1\|2763381_2764284_-	conserved phage C-terminal domain-containing protein	Q8HA96	Salmonella_phage	4.5e-34	67.3
WP_143346072.1\|2764294_2764720_-	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	5.8e-24	50.7
WP_143346073.1\|2764719_2764971_-	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	1.7e-15	50.7
WP_143346074.1\|2765080_2765461_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_143346075.1\|2765779_2765974_+	hypothetical protein	NA	NA	NA	NA
WP_143346076.1\|2765924_2766116_+	DUF1482 family protein	NA	NA	NA	NA
WP_143346077.1\|2766181_2766448_+	hypothetical protein	NA	NA	NA	NA
WP_143346078.1\|2766910_2768857_+	exodeoxyribonuclease VIII	S4TNL0	Salmonella_phage	2.3e-35	31.8
WP_073001979.1\|2769070_2769373_+	hypothetical protein	A0A248XD88	Klebsiella_phage	5.4e-16	49.4
WP_073001981.1\|2769350_2769590_+	DUF4060 family protein	NA	NA	NA	NA
WP_143346207.1\|2769758_2770019_+	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	3.3e-14	42.9
WP_143346079.1\|2769996_2771076_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	A0A2H4IYC8	uncultured_Caudovirales_phage	2.5e-108	55.6
2771204:2771234	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2822488 : 2896136

Enterobacteria_phage(33.33%)

coat,integrase,plate,terminase,head,portal,capsid,tail

attL 2830139:2830155|attR 2897351:2897367

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033145871.1\|2822488_2823451_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_048979942.1\|2823447_2825832_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_048979944.1\|2825807_2826563_-	molecular chaperone	NA	NA	NA	NA
WP_039263671.1\|2826579_2827128_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_023312260.1\|2827140_2827713_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_143346080.1\|2828142_2829408_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_023312262.1\|2829512_2830016_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_048979946.1\|2830035_2832072_-	chemotaxis protein CheA	NA	NA	NA	NA
2830139:2830155	attL	NA	NA	NA	NA
WP_032658606.1\|2832076_2833006_-	flagellar motor protein MotB	NA	NA	NA	NA
WP_008500417.1\|2833002_2833890_-	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_013096051.1\|2834013_2834592_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_028015873.1\|2834594_2834954_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_033145878.1\|2835739_2836168_+	universal stress protein UspC	NA	NA	NA	NA
WP_048979948.1\|2836183_2837608_-	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
WP_033145880.1\|2837582_2838386_-	trehalose-phosphatase	NA	NA	NA	NA
WP_029742191.1\|2838562_2839549_-	L-arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_029742192.1\|2839563_2841078_-	L-arabinose ABC transporter ATP-binding protein AraG	A0A285PWH2	Cedratvirus	2.4e-11	29.2
WP_003859687.1\|2841149_2842139_-	arabinose ABC transporter substrate-binding protein AraF	NA	NA	NA	NA
WP_023312270.1\|2842926_2843430_+	non-heme ferritin-like protein	NA	NA	NA	NA
WP_023312271.1\|2843585_2844929_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA
WP_008500405.1\|2844971_2845223_-	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_014884364.1\|2845331_2845415_-	stress response protein AzuC	NA	NA	NA	NA
WP_023336145.1\|2845649_2845988_+	lipoprotein	NA	NA	NA	NA
WP_023336146.1\|2846192_2846690_+	non-heme ferritin	NA	NA	NA	NA
WP_033145882.1\|2846726_2847068_-	hypothetical protein	NA	NA	NA	NA
WP_048979950.1\|2847297_2848509_+	tyrosine transporter TyrP	NA	NA	NA	NA
WP_053085579.1\|2848629_2850003_-	hypothetical protein	NA	NA	NA	NA
WP_023333978.1\|2850002_2850260_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_048979952.1\|2850365_2850929_-	hypothetical protein	NA	NA	NA	NA
WP_048979953.1\|2850931_2851639_-	hypothetical protein	A0A077K9W3	Ralstonia_phage	1.5e-05	29.2
WP_101744597.1\|2851642_2852338_-	hypothetical protein	A0A077K9W3	Ralstonia_phage	6.2e-07	27.8
WP_101744598.1\|2852341_2853037_-	hypothetical protein	A0A077K9W3	Ralstonia_phage	3.1e-06	29.7
WP_143346081.1\|2853033_2853666_-	DUF3274 domain-containing protein	NA	NA	NA	NA
WP_143346082.1\|2853611_2854961_-	phage late control D family protein	NA	NA	NA	NA
WP_048980138.1\|2855341_2856010_-	YecA family protein	NA	NA	NA	NA
WP_033145885.1\|2856433_2857555_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_033145886.1\|2857654_2858569_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_048980136.1\|2858580_2859855_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA
WP_048980134.1\|2859851_2860727_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_033145889.1\|2860723_2861440_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.0e-12	26.5
WP_139153138.1\|2861608_2861956_-	hypothetical protein	NA	NA	NA	NA
WP_143346208.1\|2863059_2863524_+	hypothetical protein	NA	NA	NA	NA
WP_143346083.1\|2863790_2864039_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_143346084.1\|2864087_2865239_-	phage late control D family protein	B9A7A9	Serratia_phage	5.0e-171	78.1
WP_008500387.1\|2865390_2866572_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0A7NV69	Enterobacteria_phage	7.2e-157	69.6
WP_010835090.1\|2866572_2867088_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	1.5e-63	67.6
WP_063618078.1\|2867142_2867442_+\|tail	phage tail assembly protein	B9A7B2	Serratia_phage	4.5e-31	73.7
WP_050546702.1\|2867489_2867615_+\|tail	GpE family phage tail protein	O80316	Escherichia_phage	2.1e-06	61.8
WP_143346085.1\|2867604_2870544_+\|tail	phage tail tape measure protein	B9A7B3	Serratia_phage	1.3e-242	81.3
WP_143346086.1\|2870553_2871042_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	6.6e-56	64.8
WP_143346087.1\|2871091_2871691_-\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	3.5e-51	54.3
WP_143346088.1\|2871690_2872953_-\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	7.8e-109	79.4
WP_143346089.1\|2872942_2873557_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	5.9e-70	59.1
WP_143346090.1\|2873549_2874446_-\|plate	baseplate J/gp47 family protein	A0A0A7NPY5	Enterobacteria_phage	2.7e-103	67.1
WP_143346091.1\|2874432_2874801_-	GPW/gp25 family protein	A0A0A7NQ90	Enterobacteria_phage	1.9e-31	59.5
WP_143346092.1\|2874797_2875382_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.3e-61	60.3
WP_143346093.1\|2875381_2876023_-	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	3.8e-43	47.3
WP_032646275.1\|2876019_2876469_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	3.4e-30	46.3
WP_143346094.1\|2876610_2877006_-	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_143346095.1\|2877002_2877554_-	lysozyme	Q1I0Z1	Pasteurella_virus	7.0e-30	40.2
WP_000420349.1\|2877550_2877832_-	hypothetical protein	B9A7B8	Serratia_phage	1.0e-16	50.6
WP_023305073.1\|2877822_2878023_-\|tail	tail protein X	A0A0A7NV57	Enterobacteria_phage	3.9e-15	64.6
WP_023305074.1\|2878022_2878520_-\|head	head completion/stabilization protein	B9A7B7	Serratia_phage	4.2e-58	70.3
WP_143346209.1\|2878623_2879487_-\|terminase	terminase	B9A7B6	Serratia_phage	1.5e-90	72.3
WP_143346096.1\|2879533_2880583_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	3.0e-106	53.6
WP_126533643.1\|2880606_2881440_-\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	2.3e-93	64.4
WP_143346097.1\|2881600_2883322_+	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	8.2e-226	65.5
WP_143346098.1\|2883324_2884377_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	7.9e-139	68.5
WP_143346099.1\|2885098_2885533_+	hypothetical protein	NA	NA	NA	NA
WP_172620286.1\|2885534_2888222_+	ParA family protein	NA	NA	NA	NA
WP_143346210.1\|2888352_2890773_-	replication endonuclease	F1BUS0	Erwinia_phage	1.8e-133	36.8
WP_171860840.1\|2890809_2890983_-	hypothetical protein	NA	NA	NA	NA
WP_143346101.1\|2890982_2891945_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4QWR0	Salmonella_phage	3.5e-61	44.7
WP_155574703.1\|2891937_2892105_-	hypothetical protein	NA	NA	NA	NA
WP_143346102.1\|2892185_2892467_-	hypothetical protein	NA	NA	NA	NA
WP_039268409.1\|2892466_2892649_-	hypothetical protein	NA	NA	NA	NA
WP_126533636.1\|2892678_2892882_-	DNA-binding protein	NA	NA	NA	NA
WP_071530941.1\|2893193_2893586_+	helix-turn-helix domain-containing protein	A0A2H4JFL3	uncultured_Caudovirales_phage	1.5e-10	43.8
WP_143346104.1\|2893595_2894225_+	hypothetical protein	NA	NA	NA	NA
WP_143346105.1\|2894253_2895132_+	hypothetical protein	NA	NA	NA	NA
WP_143346106.1\|2895128_2896136_+\|integrase	tyrosine-type recombinase/integrase	P79671	Haemophilus_phage	8.4e-106	57.9
2897351:2897367	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3016291 : 3024238

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048980183.1\|3016291_3017395_-	DegT/DnrJ/EryC1/StrS family aminotransferase	E5ES42	Bathycoccus_sp._RCC1105_virus	3.0e-40	32.1
WP_048980181.1\|3017850_3018246_-	WxcM-like domain-containing protein	NA	NA	NA	NA
WP_048980180.1\|3018249_3019113_-	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	1.0e-112	68.8
WP_048980178.1\|3019112_3020198_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	5.7e-100	51.8
WP_032641615.1\|3020550_3021447_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	2.0e-42	41.9
WP_048980177.1\|3021662_3022658_-	NAD-dependent epimerase/dehydratase family protein	A0A0K1L6Z1	Scale_drop_disease_virus	2.1e-08	30.7
WP_048980176.1\|3022840_3024238_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.7e-19	32.8

DBSCAN-SWA_6

3527420 : 3604252

Salmonella_phage(73.33%)

lysis,integrase,plate,terminase,head,portal,capsid,tRNA,tail

attL 3541350:3541365|attR 3606574:3606589

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014832949.1\|3527420_3528188_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_029741020.1\|3528219_3528759_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003863133.1\|3528774_3529023_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_014884878.1\|3529139_3530501_-	signal recognition particle protein	NA	NA	NA	NA
WP_014884879.1\|3530667_3531459_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_025759264.1\|3531478_3532765_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_023333122.1\|3532816_3533410_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_008502500.1\|3533532_3534411_+	NAD(+) kinase	NA	NA	NA	NA
WP_039263457.1\|3534496_3536158_+	DNA repair protein RecN	NA	NA	NA	NA
WP_008502502.1\|3536296_3536635_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_048979774.1\|3536738_3537026_-	RnfH family protein	NA	NA	NA	NA
WP_023308885.1\|3537015_3537492_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_008502505.1\|3537609_3538092_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
WP_143346130.1\|3539054_3540176_-	hypothetical protein	NA	NA	NA	NA
WP_143346132.1\|3540168_3541932_-	AAA family ATPase	NA	NA	NA	NA
3541350:3541365	attL	NA	NA	NA	NA
WP_143346133.1\|3541931_3543869_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_143346135.1\|3543865_3546325_-	SAM-dependent DNA methyltransferase	A0A2H4UVB0	Bodo_saltans_virus	2.0e-20	29.8
WP_143346136.1\|3546345_3549075_-	DEAD/DEAH box helicase family protein	A0A097BY72	Enterococcus_phage	1.5e-11	25.2
WP_143346137.1\|3549071_3549275_-	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	9.8e-14	46.8
WP_143346138.1\|3550207_3551446_+\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	8.2e-103	48.1
WP_143346139.1\|3551517_3556488_-	NACHT domain-containing protein	NA	NA	NA	NA
WP_143346140.1\|3556585_3557392_-	hypothetical protein	NA	NA	NA	NA
WP_032708920.1\|3557496_3559446_-	ATP-dependent helicase	NA	NA	NA	NA
WP_143346141.1\|3559438_3561751_-	AAA family ATPase	NA	NA	NA	NA
WP_143346142.1\|3562261_3563503_-	hypothetical protein	NA	NA	NA	NA
WP_021539885.1\|3563663_3563876_+	AlpA family phage regulatory protein	A0A1V0E8E5	Vibrio_phage	7.9e-06	41.7
WP_143346143.1\|3564007_3565570_+	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_109948934.1\|3565948_3566536_-	inovirus Gp2 family protein	NA	NA	NA	NA
WP_109948925.1\|3567190_3567625_+	hypothetical protein	NA	NA	NA	NA
WP_143346144.1\|3567684_3568524_+	hypothetical protein	NA	NA	NA	NA
WP_041412185.1\|3568582_3568774_+	hypothetical protein	NA	NA	NA	NA
WP_143346145.1\|3569187_3570009_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	7.5e-44	36.9
WP_134871855.1\|3570039_3570483_+	antirestriction protein	NA	NA	NA	NA
WP_143346146.1\|3570495_3571038_+	DNA repair protein RadC	NA	NA	NA	NA
WP_109948919.1\|3571034_3571256_+	DUF987 domain-containing protein	NA	NA	NA	NA
WP_143346147.1\|3571281_3571647_+	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_143346148.1\|3571685_3572015_+	toxin	NA	NA	NA	NA
WP_045334934.1\|3572333_3572552_-	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	5.7e-36	94.4
WP_007848866.1\|3573211_3574384_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	9.5e-210	92.8
WP_143346149.1\|3574581_3575628_+	acyltransferase	G9L6E5	Escherichia_phage	6.7e-13	26.3
WP_143346150.1\|3575619_3576222_-\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	8.1e-72	66.5
WP_143346151.1\|3576221_3577613_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	8.1e-91	40.2
WP_143346152.1\|3577609_3578215_-\|tail	phage tail protein I	E5G6N9	Salmonella_phage	8.3e-109	91.0
WP_039263450.1\|3578207_3579116_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	2.0e-143	90.4
WP_039025354.1\|3579102_3579462_-	GPW/gp25 family protein	A0A1S6KZZ4	Salmonella_phage	9.5e-52	87.3
WP_143346153.1\|3579458_3580037_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	5.3e-105	96.4
WP_143346154.1\|3580122_3581328_+	hypothetical protein	NA	NA	NA	NA
WP_143346155.1\|3581383_3581830_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	8.1e-61	81.5
WP_143346156.1\|3581822_3582254_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	1.3e-68	88.1
WP_143346158.1\|3582349_3582778_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	3.4e-56	83.6
WP_143346159.1\|3582774_3583296_-	lysozyme	E5G6N1	Salmonella_phage	2.4e-72	76.5
WP_014884902.1\|3583276_3583492_-	hypothetical protein	E5G6N0	Salmonella_phage	2.0e-20	66.2
WP_094464777.1\|3583495_3583699_-\|tail	tail protein X	E5G6M9	Salmonella_phage	1.1e-33	98.5
WP_143346160.1\|3583698_3584166_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.3e-48	58.7
WP_017441509.1\|3584264_3584918_-\|terminase	terminase	E5G6M7	Salmonella_phage	6.8e-56	55.7
WP_016150809.1\|3584921_3586070_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.2e-132	68.8
WP_143346161.1\|3586086_3586914_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.1e-74	67.4
WP_143346162.1\|3587063_3588827_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	2.9e-311	87.4
WP_143346163.1\|3588826_3589882_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	5.5e-156	78.4
WP_142431654.1\|3589929_3592122_-	S8 family peptidase	NA	NA	NA	NA
WP_142431653.1\|3592114_3593197_-	AAA family ATPase	M4QMW8	Micromonas_pusilla_virus	1.9e-15	32.9
WP_143346164.1\|3593674_3594415_+	DUF4145 domain-containing protein	A0A1S6L018	Salmonella_phage	2.4e-102	72.8
WP_143346165.1\|3594486_3594747_-	hypothetical protein	J9Q7T5	Salmonella_phage	8.1e-21	61.5
WP_017382383.1\|3594820_3595054_-	DinI family protein	A0A1S6L014	Salmonella_phage	5.4e-32	88.3
WP_014884914.1\|3595064_3595253_-	hypothetical protein	A0A1S6L006	Salmonella_phage	3.7e-23	90.0
WP_143346167.1\|3595412_3596108_-	DNA adenine methylase	A0A0M4S5U3	Salmonella_phage	1.3e-94	75.0
WP_143346168.1\|3596259_3598563_-	replication endonuclease	A0A0M4RTM8	Salmonella_phage	8.5e-271	63.0
WP_143346169.1\|3598605_3599463_-	DNA adenine methylase	E5G6L8	Salmonella_phage	1.1e-117	70.9
WP_045334062.1\|3599459_3599687_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	1.2e-28	78.7
WP_014884920.1\|3599686_3599920_-	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	8.1e-20	67.5
WP_014884921.1\|3599989_3600190_-	hypothetical protein	A0A0M5M7U3	Salmonella_phage	3.0e-23	73.8
WP_143346170.1\|3600176_3600404_-	DUF2724 domain-containing protein	A0A0M4RTI3	Salmonella_phage	2.0e-23	70.7
WP_143346171.1\|3600411_3600921_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	7.6e-79	88.2
WP_014884924.1\|3600953_3601196_-	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	6.8e-38	97.5
WP_143346172.1\|3601315_3601948_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	6.3e-67	60.0
WP_143346173.1\|3601950_3602970_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	2.3e-188	92.6
WP_143346174.1\|3602971_3604252_+	hypothetical protein	E5G6K9	Salmonella_phage	8.6e-71	37.4
3606574:3606589	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3991243 : 4051197

Erwinia_phage(38.89%)

lysis,plate,holin,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029741753.1\|3991243_3992257_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.8e-109	58.6
WP_001144069.1\|3992493_3992709_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_023333458.1\|3992824_3994570_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.4e-76	39.0
WP_023309228.1\|3994723_3996571_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_023309229.1\|3996672_3997179_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_029741756.1\|3997461_3997662_-	ogr/Delta-like zinc finger family protein	A0A2I8TV89	Erwinia_phage	6.3e-21	79.6
WP_048979131.1\|3997729_3998884_-	phage late control D family protein	A0A0M5M5V5	Salmonella_phage	1.5e-130	62.0
WP_023309232.1\|3998880_3999345_-\|tail	phage tail protein	O80317	Escherichia_phage	6.9e-55	66.7
WP_023616176.1\|4001628_4001748_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	9.7e-14	89.7
WP_047060341.1\|4001780_4002089_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	4.5e-26	69.0
WP_023309235.1\|4002145_4002664_-\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	7.7e-79	80.8
WP_047060339.1\|4002675_4003863_-\|tail	phage tail sheath protein	S4TRX2	Salmonella_phage	6.1e-188	83.3
WP_033146684.1\|4003921_4004515_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	1.4e-79	75.0
WP_065419813.1\|4004586_4005057_+\|tail	tail fiber protein	K7P7Q7	Enterobacteria_phage	1.2e-49	63.6
WP_048980215.1\|4005056_4005653_+\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	4.7e-64	58.9
WP_029742197.1\|4005636_4006032_-\|tail	tail fiber assembly protein	A0A2P1JUG3	Erwinia_phage	3.6e-12	35.4
WP_143346186.1\|4006040_4007015_-\|tail	phage tail protein	A0A0F7LBW5	Escherichia_phage	3.8e-87	56.7
WP_039260511.1\|4007011_4007620_-\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	9.9e-102	88.6
WP_048981247.1\|4007612_4008521_-\|plate	baseplate assembly protein	A0A218M4K5	Erwinia_phage	1.4e-139	85.8
WP_033146688.1\|4008526_4008877_-	GPW/gp25 family protein	A0A0M4RE59	Salmonella_phage	5.2e-39	69.8
WP_048981246.1\|4008873_4009515_-\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	2.3e-88	76.5
WP_048981245.1\|4009627_4010095_-\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	4.0e-50	61.9
WP_071994440.1\|4010057_4010231_-\|lysis	phage lysis protein	S4TNY4	Salmonella_phage	8.1e-17	74.5
WP_080973640.1\|4010190_4010718_-	protein lysB	A0A218M4K2	Erwinia_phage	7.2e-32	57.5
WP_048981243.1\|4010612_4011122_-	lysozyme	A0A218M4K3	Erwinia_phage	3.3e-74	82.1
WP_029741404.1\|4011105_4011327_-	primosomal protein	A0A218M4L5	Erwinia_phage	4.6e-25	75.0
WP_023309248.1\|4011317_4011521_-\|tail	tail protein X	U5N3E7	Enterobacteria_phage	4.0e-23	71.6
WP_048981242.1\|4011700_4012141_-	DinI-like family protein	A0A218M4I0	Erwinia_phage	5.2e-52	75.2
WP_143346187.1\|4012250_4014440_-	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	73.2
WP_045404086.1\|4014441_4014663_-	TraR/DksA family transcriptional regulator	A0A0M4S5Q7	Salmonella_phage	1.2e-25	76.4
WP_029741400.1\|4014662_4014890_-	DUF2732 domain-containing protein	A0A0M3UL87	Salmonella_phage	9.9e-15	64.0
WP_033146696.1\|4014958_4015297_-	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	5.1e-39	73.9
WP_047060318.1\|4015524_4016100_+	phage repressor protein CI	A0A218M4J1	Erwinia_phage	1.7e-66	62.8
WP_033146698.1\|4016382_4017552_+	DNA repair protein	NA	NA	NA	NA
WP_048981239.1\|4017552_4018317_-	siderophore-interacting protein	NA	NA	NA	NA
WP_029741394.1\|4018463_4018958_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_101744686.1\|4018954_4020514_-	MCP four helix bundle domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-11	29.8
WP_048981235.1\|4020850_4022371_-	PAS domain-containing methyl-accepting chemotaxis protein	A0A1B0V854	Salmonella_phage	1.9e-32	47.8
WP_048981233.1\|4022806_4024186_+	putrescine aminotransferase	A0A1V0SKB7	Klosneuvirus	7.6e-33	27.6
WP_039260488.1\|4024269_4024872_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_033146704.1\|4024914_4025601_+	B3/4 domain-containing protein	NA	NA	NA	NA
WP_048981231.1\|4025613_4026462_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_033146706.1\|4026517_4026811_-	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase	NA	NA	NA	NA
WP_048981229.1\|4026807_4027695_-	3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	NA	NA	NA	NA
WP_143346188.1\|4027706_4028708_-	autoinducer 2 ABC transporter substrate-binding protein LsrB	NA	NA	NA	NA
WP_048981228.1\|4028709_4029687_-	autoinducer 2 import system permease LsrD	NA	NA	NA	NA
WP_048981226.1\|4029687_4030719_-	autoinducer 2 ABC transporter permease LsrC	NA	NA	NA	NA
WP_048981224.1\|4030715_4032203_-	autoinducer 2 ABC transporter ATP-binding protein LsrA	W5SAS9	Pithovirus	5.9e-07	25.9
WP_039260477.1\|4032418_4033390_+	transcriptional regulator LsrR	NA	NA	NA	NA
WP_069303331.1\|4033422_4035021_+	autoinducer-2 kinase	NA	NA	NA	NA
WP_048981220.1\|4035227_4037249_+	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_048981218.1\|4037369_4038506_-	23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG	NA	NA	NA	NA
WP_023333531.1\|4038589_4039093_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_048981216.1\|4039163_4040162_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_029739669.1\|4040413_4041382_+	TerC family protein	A0A291LBC5	Escherichia_phage	1.5e-35	32.8
WP_029739668.1\|4041601_4042843_+	serine/threonine transporter SstT	NA	NA	NA	NA
WP_048981215.1\|4042978_4044466_-	altronate dehydratase	NA	NA	NA	NA
WP_048981213.1\|4044483_4045896_-	glucuronate isomerase	NA	NA	NA	NA
WP_023309287.1\|4046371_4047670_+	MFS transporter	NA	NA	NA	NA
WP_023309288.1\|4047785_4048562_+	transcriptional regulator ExuR	NA	NA	NA	NA
WP_024906405.1\|4048906_4049569_+	DedA family protein	NA	NA	NA	NA
WP_048981211.1\|4049571_4049955_+	EnvZ/OmpR regulon moderator MzrA	NA	NA	NA	NA
WP_023309291.1\|4050097_4050466_+	DUF1090 domain-containing protein	NA	NA	NA	NA
WP_008503141.1\|4050497_4050803_+	DUF883 domain-containing protein	NA	NA	NA	NA
WP_023333540.1\|4050804_4051197_+\|holin	phage holin family protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_AP019631

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

60377 : 106277

Virus_Rctr85(33.33%)

coat,transposase,integrase

attL 43240:43255|attR 69865:69880

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
43240:43255	attL	NA	NA	NA	NA
WP_143346254.1\|60377_61367_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJ76	Virus_Rctr85	1.3e-47	39.7
WP_143346255.1\|61791_62262_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_143346256.1\|63099_64146_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_172620306.1\|64177_65128_+	delta(1)-pyrroline-2-carboxylate reductase family protein	NA	NA	NA	NA
WP_143346258.1\|65339_65783_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
WP_143346259.1\|65789_67286_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
WP_143346260.1\|67484_68345_+	alpha/beta hydrolase	A2RQC8	Archaeal_BJ1_virus	1.4e-08	22.1
WP_143346261.1\|70157_70778_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
69865:69880	attR	NA	NA	NA	NA
WP_143346262.1\|70840_72943_-	hypothetical protein	NA	NA	NA	NA
WP_143346263.1\|73068_75723_-	inverse autotransporter beta domain-containing protein	NA	NA	NA	NA
WP_143346264.1\|76196_77060_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_088245210.1\|77434_78319_+	carbapenem-hydrolyzing class A beta-lactamase FRI-4	A0A1B0VBP7	Salmonella_phage	2.0e-58	43.5
WP_143346265.1\|78556_79495_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_172620307.1\|79517_81770_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_143346267.1\|81877_82621_-	molecular chaperone	NA	NA	NA	NA
WP_143346268.1\|82623_83112_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_143346269.1\|84376_85141_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_143346270.1\|85179_87696_+	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_164850603.1\|87738_88167_+	hypothetical protein	NA	NA	NA	NA
WP_143346271.1\|88270_88777_+	hypothetical protein	NA	NA	NA	NA
WP_143346272.1\|88840_89326_+	hypothetical protein	NA	NA	NA	NA
WP_143346273.1\|89500_90082_+	hypothetical protein	NA	NA	NA	NA
WP_172620305.1\|91160_91679_+	hypothetical protein	NA	NA	NA	NA
WP_143346274.1\|92756_93254_+	hypothetical protein	NA	NA	NA	NA
WP_143346275.1\|93652_94729_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_143346276.1\|96055_97024_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_143346277.1\|97628_98960_-	hypothetical protein	NA	NA	NA	NA
WP_172620308.1\|99525_100005_-	hypothetical protein	NA	NA	NA	NA
WP_172620309.1\|100010_100772_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_143346280.1\|100861_101374_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_143346281.1\|101675_102185_-	hypothetical protein	NA	NA	NA	NA
WP_143346282.1\|102218_102791_-	hypothetical protein	NA	NA	NA	NA
WP_164850603.1\|102894_103323_-	hypothetical protein	NA	NA	NA	NA
WP_172620312.1\|103460_103760_-	hypothetical protein	NA	NA	NA	NA
WP_143346269.1\|103759_104524_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_143346268.1\|105788_106277_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP019630

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_AP019631

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection