CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP019792	Thermus thermophilus strain AA2-20	2 crisprs	cas2,DEDDh,csa3,cas3,Cas9_archaeal	0	1	1	0
NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	3 crisprs	Cas14u_CAS-V,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4	0	47	1	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP019793_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019793_1

29250-30936

TypeI-E

I-E,II-B

Consensus_repeat	Method
CGGTCCATCCCCACGTGCGTGGGGACTAC	PILER-CR
CGGTCCATCCCCACGTGCGTGGGGACTAC	CRISPRCasFinder
CGGTCCATCCCCACGTGCGTGGGGACTAC	CRT

27 spacers

WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2

The CRISPR arrays of NZ_AP019793_1

>merge|NZ_AP019793|1|29250-30936|PILER-CR,CRISPRCasFinder,CRT
CGGTCCATCCCCACGTGCGTGGGGACTACGGCGAACGGGTTCACGCCGTCCTGGGTGAAGAGCGGTCCATCCCCACGTGCGTGGGGACTACGCTTGCGGGACTCCTCCACGGTCTCGGCGCTCGGTCCATCCCCACGTGCGTGGGGACTACTACCTCTTCCCCTACTGGAGGGCCAAGGGCGCCGGTCCATCCCCACGTGCGTGGGGACTACGGCCGGGGCAGAGGCCAAGGAGTGAATAACCTTCGGTCCATCCCCACGTGCGTGGGGACTACTTGTTTTCCACGGCCTTGCGGATGACCTCCATCGGTCCATCCCCACGTGCGTGGGGACTACGTCCCCGGCGGCGGGGATCCCCGCCGCCAGGTCGGTCCATCCCCACGTGCGTGGGGACTACGGTCGTCTGGTCTGCGGGCCCGCTGGAGGTTGCGGTCCATCCCCACGTGCGTGGGGACTACGAAGATGTTGCTCCTTCAGATCGGTCCCTACAGCGGTCCATCCCCACGTGCGTGGGGACTACGCCCTTGGGCCACTCGGGGCGCTCCGCGTGGACCGGTCCATCCCCACGTGCGTGGGGACTACATGATCTCGTTGGTGGAGCTGCGGACGAGCCCCGGTCCATCCCCACGTGCGTGGGGACTACGTGAAGGGGCAGGGGCCCCGGCCGGGAAATCTCGGTCCATCCCCACGTGCGTGGGGACTACCCGAGGGTCACGAAGCCGGCCCAGCGGCCATCCGGTCCATCCCCACGTGCGTGGGGACTACGATGGCTGGTATGGACCTATCGGCCAGATTGAGCGGTCCATCCCCACGTGCGTGGGGACTACGTGGCGGTTCTTTTGACGGCGGCGTTGGCTCAACGGTCCATCCCCACGTGCGTGGGGACTACGATGGTGTGCCGGAGGAGGTTCCTCCAGTCCACCGGTCCATCCCCACGTGCGTGGGGACTACGGCCTCCTCTTTATCGCCACGGGGACGCTGGTCGGTCCATCCCCACGTGCGTGGGGACTACCCTTCCCTTTCTCGTAGAAGGCGCCTTCCCCTCGGTCCATCCCCACGTGCGTGGGGACTACTTGGGCCTCGAGGATGGCCTCCGGGGTCAAGAACGGTCCATCCCCACGTGCGTGGGGACTACCTGGGTGGCGATGACCCCACTCTCCACGTCCCCCGGTCCATCCCCACGTGCGTGGGGACTACGTGGTGGGGCCCGTCCTCGCGGCGGCCATCCGCGGTCCATCCCCACGTGCGTGGGGACTACCCAATCGCCTGGACCGCCGCCGCGTAGCGTCCCGGTCCATCCCCACGTGCGTGGGGACTACCGCGGGGATCTGGTCCAGCGCCTGGAACGGGTCGGTCCATCCCCACGTGCGTGGGGACTACTGAGAGGCGAACGCTGCCGGGAATGTCCATATCGGTCCATCCCCACGTGCGTGGGGACTACGCCAAGACAGCCAACCTACGCATCTTCCATCTCCGGTCCATCCCCACGTGCGTGGGGACTACACTTTTCCCCCTCTGTGGTGAAGAACTGCCTGACGGTCCATCCCCACGTGCGTGGGGACTACTCCTGGGCCCACTGTGGAGGCTGAGGAAACCCCGGTCCATCCCCACGTGCGTGGGGACTACAGCGTCAGCGTGAGTATCGCCAGACGGCACATTCGGTCCATCCCCACGTGCGTGGGGACTAC

>NZ_AP019793|1|1|29250-30936|PILER-CR
CGGTCCATCCCCACGTGCGTGGGGACTAC	GGCGAACGGGTTCACGCCGTCCTGGGTGAAGAG
CGGTCCATCCCCACGTGCGTGGGGACTAC	GCTTGCGGGACTCCTCCACGGTCTCGGCGCT
CGGTCCATCCCCACGTGCGTGGGGACTAC	TACCTCTTCCCCTACTGGAGGGCCAAGGGCGC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GGCCGGGGCAGAGGCCAAGGAGTGAATAACCTT
CGGTCCATCCCCACGTGCGTGGGGACTAC	TTGTTTTCCACGGCCTTGCGGATGACCTCCAT
CGGTCCATCCCCACGTGCGTGGGGACTAC	GTCCCCGGCGGCGGGGATCCCCGCCGCCAGGT
CGGTCCATCCCCACGTGCGTGGGGACTAC	GGTCGTCTGGTCTGCGGGCCCGCTGGAGGTTG
CGGTCCATCCCCACGTGCGTGGGGACTAC	GAAGATGTTGCTCCTTCAGATCGGTCCCTACAG
CGGTCCATCCCCACGTGCGTGGGGACTAC	GCCCTTGGGCCACTCGGGGCGCTCCGCGTGGAC
CGGTCCATCCCCACGTGCGTGGGGACTAC	ATGATCTCGTTGGTGGAGCTGCGGACGAGCCC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GTGAAGGGGCAGGGGCCCCGGCCGGGAAATCT
CGGTCCATCCCCACGTGCGTGGGGACTAC	CCGAGGGTCACGAAGCCGGCCCAGCGGCCATC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GATGGCTGGTATGGACCTATCGGCCAGATTGAG
CGGTCCATCCCCACGTGCGTGGGGACTAC	GTGGCGGTTCTTTTGACGGCGGCGTTGGCTCAA
CGGTCCATCCCCACGTGCGTGGGGACTAC	GATGGTGTGCCGGAGGAGGTTCCTCCAGTCCAC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GGCCTCCTCTTTATCGCCACGGGGACGCTGGT
CGGTCCATCCCCACGTGCGTGGGGACTAC	CCTTCCCTTTCTCGTAGAAGGCGCCTTCCCCT
CGGTCCATCCCCACGTGCGTGGGGACTAC	TTGGGCCTCGAGGATGGCCTCCGGGGTCAAGAA
CGGTCCATCCCCACGTGCGTGGGGACTAC	CTGGGTGGCGATGACCCCACTCTCCACGTCCCC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GTGGTGGGGCCCGTCCTCGCGGCGGCCATCCG
CGGTCCATCCCCACGTGCGTGGGGACTAC	CCAATCGCCTGGACCGCCGCCGCGTAGCGTCC
CGGTCCATCCCCACGTGCGTGGGGACTAC	CGCGGGGATCTGGTCCAGCGCCTGGAACGGGT
CGGTCCATCCCCACGTGCGTGGGGACTAC	TGAGAGGCGAACGCTGCCGGGAATGTCCATAT
CGGTCCATCCCCACGTGCGTGGGGACTAC	GCCAAGACAGCCAACCTACGCATCTTCCATCTC
CGGTCCATCCCCACGTGCGTGGGGACTAC	ACTTTTCCCCCTCTGTGGTGAAGAACTGCCTGA
CGGTCCATCCCCACGTGCGTGGGGACTAC	TCCTGGGCCCACTGTGGAGGCTGAGGAAACCC
CGGTCCATCCCCACGTGCGTGGGGACTAC	AGCGTCAGCGTGAGTATCGCCAGACGGCACATT
CGGTCCATCCCCACGTGCGTGGGGACTAC

>NZ_AP019793|1|1|29250-30936|CRISPRCasFinder
CGGTCCATCCCCACGTGCGTGGGGACTAC	GGCGAACGGGTTCACGCCGTCCTGGGTGAAGAG
CGGTCCATCCCCACGTGCGTGGGGACTAC	GCTTGCGGGACTCCTCCACGGTCTCGGCGCT
CGGTCCATCCCCACGTGCGTGGGGACTAC	TACCTCTTCCCCTACTGGAGGGCCAAGGGCGC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GGCCGGGGCAGAGGCCAAGGAGTGAATAACCTT
CGGTCCATCCCCACGTGCGTGGGGACTAC	TTGTTTTCCACGGCCTTGCGGATGACCTCCAT
CGGTCCATCCCCACGTGCGTGGGGACTAC	GTCCCCGGCGGCGGGGATCCCCGCCGCCAGGT
CGGTCCATCCCCACGTGCGTGGGGACTAC	GGTCGTCTGGTCTGCGGGCCCGCTGGAGGTTG
CGGTCCATCCCCACGTGCGTGGGGACTAC	GAAGATGTTGCTCCTTCAGATCGGTCCCTACAG
CGGTCCATCCCCACGTGCGTGGGGACTAC	GCCCTTGGGCCACTCGGGGCGCTCCGCGTGGAC
CGGTCCATCCCCACGTGCGTGGGGACTAC	ATGATCTCGTTGGTGGAGCTGCGGACGAGCCC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GTGAAGGGGCAGGGGCCCCGGCCGGGAAATCT
CGGTCCATCCCCACGTGCGTGGGGACTAC	CCGAGGGTCACGAAGCCGGCCCAGCGGCCATC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GATGGCTGGTATGGACCTATCGGCCAGATTGAG
CGGTCCATCCCCACGTGCGTGGGGACTAC	GTGGCGGTTCTTTTGACGGCGGCGTTGGCTCAA
CGGTCCATCCCCACGTGCGTGGGGACTAC	GATGGTGTGCCGGAGGAGGTTCCTCCAGTCCAC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GGCCTCCTCTTTATCGCCACGGGGACGCTGGT
CGGTCCATCCCCACGTGCGTGGGGACTAC	CCTTCCCTTTCTCGTAGAAGGCGCCTTCCCCT
CGGTCCATCCCCACGTGCGTGGGGACTAC	TTGGGCCTCGAGGATGGCCTCCGGGGTCAAGAA
CGGTCCATCCCCACGTGCGTGGGGACTAC	CTGGGTGGCGATGACCCCACTCTCCACGTCCCC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GTGGTGGGGCCCGTCCTCGCGGCGGCCATCCG
CGGTCCATCCCCACGTGCGTGGGGACTAC	CCAATCGCCTGGACCGCCGCCGCGTAGCGTCC
CGGTCCATCCCCACGTGCGTGGGGACTAC	CGCGGGGATCTGGTCCAGCGCCTGGAACGGGT
CGGTCCATCCCCACGTGCGTGGGGACTAC	TGAGAGGCGAACGCTGCCGGGAATGTCCATAT
CGGTCCATCCCCACGTGCGTGGGGACTAC	GCCAAGACAGCCAACCTACGCATCTTCCATCTC
CGGTCCATCCCCACGTGCGTGGGGACTAC	ACTTTTCCCCCTCTGTGGTGAAGAACTGCCTGA
CGGTCCATCCCCACGTGCGTGGGGACTAC	TCCTGGGCCCACTGTGGAGGCTGAGGAAACCC
CGGTCCATCCCCACGTGCGTGGGGACTAC	AGCGTCAGCGTGAGTATCGCCAGACGGCACATT
CGGTCCATCCCCACGTGCGTGGGGACTAC

>NZ_AP019793|1|1|29250-30936|CRT
CGGTCCATCCCCACGTGCGTGGGGACTAC	GGCGAACGGGTTCACGCCGTCCTGGGTGAAGAG
CGGTCCATCCCCACGTGCGTGGGGACTAC	GCTTGCGGGACTCCTCCACGGTCTCGGCGCT
CGGTCCATCCCCACGTGCGTGGGGACTAC	TACCTCTTCCCCTACTGGAGGGCCAAGGGCGC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GGCCGGGGCAGAGGCCAAGGAGTGAATAACCTT
CGGTCCATCCCCACGTGCGTGGGGACTAC	TTGTTTTCCACGGCCTTGCGGATGACCTCCAT
CGGTCCATCCCCACGTGCGTGGGGACTAC	GTCCCCGGCGGCGGGGATCCCCGCCGCCAGGT
CGGTCCATCCCCACGTGCGTGGGGACTAC	GGTCGTCTGGTCTGCGGGCCCGCTGGAGGTTG
CGGTCCATCCCCACGTGCGTGGGGACTAC	GAAGATGTTGCTCCTTCAGATCGGTCCCTACAG
CGGTCCATCCCCACGTGCGTGGGGACTAC	GCCCTTGGGCCACTCGGGGCGCTCCGCGTGGAC
CGGTCCATCCCCACGTGCGTGGGGACTAC	ATGATCTCGTTGGTGGAGCTGCGGACGAGCCC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GTGAAGGGGCAGGGGCCCCGGCCGGGAAATCT
CGGTCCATCCCCACGTGCGTGGGGACTAC	CCGAGGGTCACGAAGCCGGCCCAGCGGCCATC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GATGGCTGGTATGGACCTATCGGCCAGATTGAG
CGGTCCATCCCCACGTGCGTGGGGACTAC	GTGGCGGTTCTTTTGACGGCGGCGTTGGCTCAA
CGGTCCATCCCCACGTGCGTGGGGACTAC	GATGGTGTGCCGGAGGAGGTTCCTCCAGTCCAC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GGCCTCCTCTTTATCGCCACGGGGACGCTGGT
CGGTCCATCCCCACGTGCGTGGGGACTAC	CCTTCCCTTTCTCGTAGAAGGCGCCTTCCCCT
CGGTCCATCCCCACGTGCGTGGGGACTAC	TTGGGCCTCGAGGATGGCCTCCGGGGTCAAGAA
CGGTCCATCCCCACGTGCGTGGGGACTAC	CTGGGTGGCGATGACCCCACTCTCCACGTCCCC
CGGTCCATCCCCACGTGCGTGGGGACTAC	GTGGTGGGGCCCGTCCTCGCGGCGGCCATCCG
CGGTCCATCCCCACGTGCGTGGGGACTAC	CCAATCGCCTGGACCGCCGCCGCGTAGCGTCC
CGGTCCATCCCCACGTGCGTGGGGACTAC	CGCGGGGATCTGGTCCAGCGCCTGGAACGGGT
CGGTCCATCCCCACGTGCGTGGGGACTAC	TGAGAGGCGAACGCTGCCGGGAATGTCCATAT
CGGTCCATCCCCACGTGCGTGGGGACTAC	GCCAAGACAGCCAACCTACGCATCTTCCATCTC
CGGTCCATCCCCACGTGCGTGGGGACTAC	ACTTTTCCCCCTCTGTGGTGAAGAACTGCCTGA
CGGTCCATCCCCACGTGCGTGGGGACTAC	TCCTGGGCCCACTGTGGAGGCTGAGGAAACCC
CGGTCCATCCCCACGTGCGTGGGGACTAC	AGCGTCAGCGTGAGTATCGCCAGACGGCACATT
CGGTCCATCCCCACGTGCGTGGGGACTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019793.1\|WP_143587045.1\|25045_26026_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224525
NZ_AP019793.1\|WP_143587058.1\|34918_36400_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_AP019793.1\|WP_143584933.1\|21781_22882_-\|transposase	unknown	unknown	gnl\|CDD\|379252
NZ_AP019793.1\|WP_143587055.1\|32109_34869_+\|CRISPR-associated-endonuclease-Cas3''	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NZ_AP019793.1\|WP_143587061.1\|36891_38007_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_AP019793.1\|WP_143587037.1\|18453_18855_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350249
NZ_AP019793.1\|WP_143587053.1\|31123_32113_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_AP019793.1\|WP_172619236.1\|40245_40623_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NZ_AP019793.1\|WP_143587047.1\|26096_27254_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238742
NZ_AP019793.1\|WP_143587071.1\|41699_42452_-\|5-oxoprolinase-subunit-PxpA	unknown	unknown	gnl\|CDD\|377121
NZ_AP019793.1\|WP_014630430.1\|23745_24978_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_AP019793.1\|WP_172619249.1\|27246_27912_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019793.1\|WP_143587041.1\|19896_20385_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|238357
NZ_AP019793.1\|WP_143587068.1\|39314_40292_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_AP019793.1\|WP_143587059.1\|36396_36888_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|237559
NZ_AP019793.1\|WP_143587043.1\|20391_21717_-\|Rieske-2Fe-2S-domain-containing-protein	unknown	unknown	gnl\|CDD\|132273
NZ_AP019793.1\|WP_143587038.1\|19037_19886_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_AP019793.1\|WP_143587051.1\|28118_29063_-\|DNA-methylase-N-4/N-6-domain-containing-protein	unknown	unknown	gnl\|CDD\|334588
NZ_AP019793.1\|WP_143587063.1\|38008_38683_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|378243
NZ_AP019793.1\|WP_143587065.1\|38669_39305_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795

Protein	Function_ID	Function_description	E-value
NZ_AP019793.1\|WP_143587045.1\|25045_26026_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	3.24503e-92
NZ_AP019793.1\|WP_143587058.1\|34918_36400_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	1.24634e-120
NZ_AP019793.1\|WP_143584933.1\|21781_22882_-\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	0.000249336
NZ_AP019793.1\|WP_143587055.1\|32109_34869_+\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.5398e-105
NZ_AP019793.1\|WP_143587061.1\|36891_38007_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.36921e-155
NZ_AP019793.1\|WP_143587037.1\|18453_18855_+\|PIN-domain-containing-protein	gnl\|CDD\|350249	cd18682, PIN_VapC-like, Uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.3787e-50
NZ_AP019793.1\|WP_143587053.1\|31123_32113_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	4.14342e-34
NZ_AP019793.1\|WP_172619236.1\|40245_40623_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	9.91833e-39
NZ_AP019793.1\|WP_143587047.1\|26096_27254_-\|VWA-domain-containing-protein	gnl\|CDD\|238742	cd01465, vWA_subgroup, VWA subgroup: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the VWA domain in these proteins. The members do have a conserved MIDAS motif. The biochemical function however is not known.	1.73679e-30
NZ_AP019793.1\|WP_143587071.1\|41699_42452_-\|5-oxoprolinase-subunit-PxpA	gnl\|CDD\|377121	pfam03746, LamB_YcsF, LamB/YcsF family. This family includes LamB. The lam locus of Aspergillus nidulans consists of two divergently transcribed genes, lamA and lamB, involved in the utilisation of lactams such as 2-pyrrolidinone. Both genes are under the control of the positive regulatory gene amdR and are subject to carbon and nitrogen metabolite repression. The exact molecular function of the proteins in this family is unknown.	2.94364e-141
NZ_AP019793.1\|WP_014630430.1\|23745_24978_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.55562e-83
NZ_AP019793.1\|WP_143587065.1\|38669_39305_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	1.43154e-70
NZ_AP019793.1\|WP_143587041.1\|19896_20385_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|238357	cd00667, ring_hydroxylating_dioxygenases_beta, Ring hydroxylating dioxygenase beta subunit. This subunit has a similar structure to NTF-2, Ketosteroid isomerase and scytalone dehydratase.The degradation of aromatic compounds by aerobic bacteria frequently begins with the dihydroxylation of the substrate by nonheme iron-containing dioxygenases. These enzymes consist of two or three soluble proteins that interact to form an electron-transport chain that transfers electrons from reduced nucleotides (NADH) via flavin and [2Fe-2S] redox centers to a terminal dioxygenase. Aromatic-ring-hydroxylating dioxygenases oxidize aromatic hydrocarbons and related compounds to cis-arene diols. These enzymes utilize a mononuclear non-heme iron center to catalyze the addition of dioxygen to their respective substrates. The active site of these enzymes however is in the alpha sub-unit. No functional role has been attributed to the beta sub-unit except for a structural role.	4.21065e-38
NZ_AP019793.1\|WP_143587068.1\|39314_40292_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.60459e-144
NZ_AP019793.1\|WP_143587059.1\|36396_36888_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|237559	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional.	3.74784e-69
NZ_AP019793.1\|WP_143587043.1\|20391_21717_-\|Rieske-2Fe-2S-domain-containing-protein	gnl\|CDD\|132273	TIGR03229, benzo_1_2_benA, benzoate 1,2-dioxygenase, large subunit. Benzoate 1,2-dioxygenase (EC 1.14.12.10) belongs to the larger family of aromatic ring-hydroxylating dioxygenases. Members of this family all act on benzoate, but may have additional activities on various benozate analogs. This model describes the large subunit. Between the trusted and noise cutoffs are similar enzymes, likely to act on benzoate but perhaps best identified according to some other activity, such as 2-chlorobenzoate 1,2-dioxygenase (1.14.12.13). [Energy metabolism, Other].	3.58887e-91
NZ_AP019793.1\|WP_143587038.1\|19037_19886_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	3.19641e-60
NZ_AP019793.1\|WP_143587051.1\|28118_29063_-\|DNA-methylase-N-4/N-6-domain-containing-protein	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	5.78509e-08
NZ_AP019793.1\|WP_143587063.1\|38008_38683_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|378243	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum.	7.17638e-54

>NZ_AP019793.1|WP_143587051.1|28118_29063_-|DNA-methylase-N-4/N-6-domain-containing-protein
MKRNAWEVYGEVLKTARELGLEGEEQEVAKALLAWPKERFHAFAARVGLKAKYLRHDLLPIAFLPEPLREALQGGLPLREAHRLHRLLKRGELSLQDLTGKDPKALMALPARPGEVDPRLPVWFFPPEPWEEALPMAVARALVRLYTKEGELVLDPMAGRGTVVEAARALGRRAWGGDIAPRGPLVERAHIRNLPQRFRKEAALVVLHPPTFSTWLREEGYREEAEERYGEYIRHISSFLDLCRPALAPGGKLVLVARPRRALTPKDLEAGHDFFLAPWERALAEADFRPLSYHLAVSQDGRQDWHLFVGEARG
>NZ_AP019793.1|WP_172619249.1|27246_27912_-|hypothetical-protein
MELSPLLFSRYPIFLARRYRLPMGLPPLHALVRVLEEEGRAAPLPLEGAFWKLARSREPAVALVAYAASRPKAPLPFLVEMAVGNPQALALYLGALEAVEGRNLAQDLVAHPLLGPVFAFALEEAGEVFPPAPAEEGLLDLPPPSPKPHRPLFGPPHAGASEEDPAWKALYDALLRGAGPGDPGEALLEWRDYWYWRGSGEALPSDGKETPGEDGNGGAHA
>NZ_AP019793.1|WP_143587047.1|26096_27254_-|VWA-domain-containing-protein
MHRFAKPKQPSELGLRISRGVVRGKDLLRVELTAPERPPLTPDLALVLDRSGSMAGAKLQEAKAAALALLEAFPERGRVAVVAYNHEVEVGGLDRKAARAYLEALKASGRTALHAGWRQGILLLGDRTRPRFLFLLSDGLANEGLTDLEALAREAREAARAGVYTFTLGFGEGYDRALLARMAREGGGVHRYVAEGELQGALAEELAFLKGPVNLGVWVALGGAEVHLAPFAPKEARVLLLPVGEARTLEVEERLPGGAVLYRLPLPGPAPEGSEAWREVELEALLAEAGRLLEREAASAAEAQALAEEAKELALRLQAHPLGESERTLSLLQALEGFRKAMERLAARYEAWASDRVAREGTAYAAHLSFPQRLARLKYRDRTKA
>NZ_AP019793.1|WP_143587045.1|25045_26026_-|substrate-binding-domain-containing-protein
MPSGKPLTIRDLAKAARVSVATVSRALNGRPGVSQATRERILALAREWGFVPNAAAREMVGVATAVGILFAPGVRRHTPYFTLLLEALSEALWREGLRVAEVEVDPKGKPRREALGYILLGAHEGDRRVEALSREGVPFVLVGVGEGIPWVAPEDVEGGYLATRHLVDLGHRTIAHLTGYPEHQAGRERLLGYRKALAEAGIPFREDLVLDGAFDPLTAYRTVRKAWEQGLRFTALFAASDEMALGAWAALEDLGVRVPEEVSLVGYDDLPEFGERLTTVRQDIPTIARKAVALLLEARDGMPPRGLRVPVRLVVRGTTRRREVGA
>NZ_AP019793.1|WP_014630430.1|23745_24978_-|ABC-transporter-substrate-binding-protein
MKKAFLALLALLGLAFAQTQVRISGWGGTDIAIVSGLLKEVVQPKLDKEGIRVVYEPIEGDYTQWLFNALSAGTAPDLFYVDVFWSESLFATGRVEPLDAYFSKQEIAEFLPNLIQAFTYRGKLYGIPKDFNTLALQYNTDLFDEAGVAYPNQQDTWETFEAKLRQVQAKLKDVAGLCVVPDFARFGAFAFATGWKPFDEKGRTVLDQNFRRAFEWYTGLVKRGAARVAQDLGEGWTGGCFGSEKAATALEGAWIAGFLRDKAPNLPYRTTFLPLDPVTKKRGNFIFTVSWSLNAASKNKEAAVKVLKALTSPEAQQWVLERGLAIPSRKALANNPYFQRAGKEPELNRVVFQGSLAQGGHVYPFKFLAYGGDWMRPINDALQAVMTGQKSVDQALKEAQAALDRLTGRR
>NZ_AP019793.1|WP_143584933.1|21781_22882_-|transposase
MNQAALSLLWTILALMPTPHLRESLKALLFLFLTGHGKARPQHSKTKSPSALSRFLNRYPWPTRALIRLAREEAQKALDRARRRKGPKPRLLVVLDLVTLEKRGRFPALPLSFFHGKWGLHLVVLYLVYGDLRVPWAYRLWRGKGEKGLSLLALSLLASLPLWMRRTFRIRVAADAAFGTAWFLFGVRRLGLETVVGMRRDRRLRGGGRLLDLRRQGSRVYLWGLSFPVWVAWYRYPLPQGGWEWRYVVATFPATPRTMLTWGRRRFTVEHFFRAAKSEFSLGQFGQRTALGVHRFLVLSLLAYLLAHWVGVEGKGSWREAREGAARVLLPELVVQVILRELHALGLGPPGGGGEGLCGVCGRCKF
>NZ_AP019793.1|WP_143587043.1|20391_21717_-|Rieske-2Fe-2S-domain-containing-protein
MTILNEHLVLDDPERGIFKVHRLAFTSQEIFDLEREYIFGQCWLYLGHESEIPSPGDYVRRWIGGRPLFMVRDEDGQIRVFYNTCTHRGALVCRRDKGNAKVFQCFYHAWTFDTKGRLIGVPKEERFGPGFAKEELGLRSPRVGTYRGFVFVNFSTNPPPLEAYLAGAKEVLDLVADQAEEGMVVLEGSHRYAIRANWKLMVENSVDSYHVVPTHQTYLEYLEYVKSLRGEGGNHSSAKQMVRHEVGLVLGNGHAAFEYDAKPVGGRPVAEYHPLLGGEEVRQEIEEVKARLLARLGEERGLRIARRARNILLFPNAIIVDSRAVVLRTVEPISPHATAITQWELVPREELGTNRLKGRMAAYLSFFGPGGLATPDDVEAVESCQAGFAAGEVEYNDLSLGYAKEDSGVTELPMRVFWRQWHALIQGKPAPTSWEDPIAAR
>NZ_AP019793.1|WP_143587041.1|19896_20385_-|nuclear-transport-factor-2-family-protein
MSLRAKVEDFLYHEAELLDEWHLDEWLALFTEDARYVVPTTDLPEGDPSRDLVFVDDDIVALRGRVNRLKSRHAHREYPWSRTVRLITNVRVKEEGDEVLVRANFAVYRSRDPSGRWSHTHEYVGEYFYRLVRDGESFRIRYKRATLQMEGLKEHGAVSIVV
>NZ_AP019793.1|WP_143587038.1|19037_19886_-|SDR-family-oxidoreductase
MSSPCGRLKGKVALLTGVSPNILGAIAERFAQEGACVAALSLREDFALGCATYLQKLGHEAMGLVCDVTREEAVQSCVASVIRKWGRIDILVNGAATQVQKGLLETNLSEWSKQLDVILTGTFIFTRIVSSEMVKRGIRGSIINIASTEGHQGVPDNIAYATAKGALLHFTRCAAMDLARYGIRVNSLTPTATDETEAVERAARWGVAWKGALAKTKAPTRLPPEAKTKLIPLGRLPKPSDYAGAAVFLASEEASMITGIDLRIDGGAASKYWQWLPHASTT
>NZ_AP019793.1|WP_143587037.1|18453_18855_+|PIN-domain-containing-protein
MTAVLDASALLALLKGEPGAERVAEALERGAYLSAVNLAEVLSKLADWGEDPAEAQARMEGVGLLGAAVEVLPFTGEDALEVARLRALTRAYGLSFGDRACLALARRLGLPALTAERAWAELDLGIPVEVLRP
>NZ_AP019793.1|WP_143587053.1|31123_32113_+|WYL-domain-containing-protein
MGQEAKSARLLQMAEALKLRPMRVGELARRFGVSERTVERDLEALLDLGFPVERLARGLYRIADRPPSLHPIEALALFAAGRLLYHQAPTRQYRMALDKLARMLPEPLRGLLLRSTQGLEARQGESRTLEMVARALLERRVLAFEYRSGGSKNWRPKELLVYFLEANRANLGLYAIGYERTYHRAVLTFKLARMRHARLLDETYEIPPDFDPNAYLRRAWGVVGVREEGVEVRLRFTPEAAWRVLEGDYPGLHLEEELPDGSLLARLEAAPFKGGVPWEVLAWVQSFGPRVEVLSPPELRRLWLEEAERVLALYGNRQEVSGSPPKVRA
>NZ_AP019793.1|WP_143587055.1|32109_34869_+|CRISPR-associated-endonuclease-Cas3''
MSVEEAALALWAKSGDPFHPLLAHMLDTAAVALAVLRREPPRTRTLYAQDWGLPEEEAVRWVALLVGLHDLGKASPVFQAGWEEGKERVQRAGLPFGELLDWVAHGVFTELFLRRLLKEKGLPERAANDLAAALGAHHGFPANAEEKSRARRHLKAEDPLWKEARRWLLEEVFRRLGAPLPPSEGNGEARPEAVLRVMALASFADWVASDPSLFPYGRDPRRGNYLKEALRLAQEALNRLGWPAFAKAQRREFGELFPYIPKPNALQEKVPALLEGACTPVLLLVEAPMGMGKTEAALYAHHLLQAGLGHRGLYVALPTQATANGLFPRVRGFLERLGEGSRLELQLQHGTALLNPHYAELLERAAPRQVGEEEEGGAVASAWFSARKRAMLAPYGVGTLDQALLGVLRVKHHFVRLWGLMNRVVVLDEVHAYDVYTSGLLQALLRWLRALGSSAVVMTATLPPSRRRALLEAWAGKEVEGQDLGPYPRVVLVGEGVKARSLPPAREVEVALEVLREVDVEPLAQRLKGALPGAVGAMVNTVDRAQALYRALGEGKRLTLGELAQILGKEGGEAWQEVLKALPERKDEVVGKVLPDGTRVFLLHARFPAEERALREGVALALFGKGGPRPKRAILVATQVAEQSLDLDVDLLYTDLAPIDLLFQRSGRLHRHERPRPEEHARPRLLLGVPGDLDFGKPLYWDKVYEDYVLLATWRALSGRDRLRVPGDLEALLEEVYEGEDPGRFPEDLRERAKKSLKALQERRDREANTARRLSLSELGRLLAYWDEGALVAQERLEDDEEKAETQRLLTRLGDPSVAVVPLFRVGEGLFLDREGRRRAPLRGEVSREEAEALFRRAVRLSRFPLPQELLKEEPPPAWRKSGLLRGLRSLEVGRVFGSGERAFRVELDAELGVVYLPV
>NZ_AP019793.1|WP_143587058.1|34918_36400_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MRSLAKFNLIDEPWIPVLKGGRVVEVGIGEALLRAHEFTRIETPSPLEEAALHRLLLAVLHRALRGPRRLEDVLDWWREGGFPQDPIRDYLNRFRDRFFLFHPEAPFLQVADLPEENPLPWSKLLPELASGNNPTLFDHTTEENLPKATYAQAARALLVHQAFAPGGLLRRYGVGSAKDAPVARPALFLPTGRNLLETLLLNLVPYGPEGDAPIWEEPPLRFADLEGGKTAWPLSGRTRVYTWPARGVRFLDEGNGVRFMGYGPGVEPLETPHRDPMVAQRLDAKGNLLVLRLSEERSFWRDFSAMLPRQGGKVAATLEHAENLQGELEESEEVRVNLRVLGQVSDQAKILDVRREVYPLPSGLLTPRAEENLEKALKMAEVLGQGLGRLALRVAQAVVGKRDHKELADFARSLPLERLYWHVLDGAFPGFFARVEEKASLDLWREALRGAALEAWKATRRFLGTGARHLKALAQGEQEFGRLLGELGEEVRT
>NZ_AP019793.1|WP_143587059.1|36396_36888_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSQGERFLDWLRRLQGQKAWTAARAALRRSLAFPPGAYPRAMPYVEPFVAEEGWRREAHYLVAALYALKDGDHQVGRTLARALWEKAQGSASVEKRFLALLEADRDQIAFRLRQAVALVEGGVDFARLLDDLLRWFSPERHVQARWAREFYDAEASEEEKKEV
>NZ_AP019793.1|WP_143587061.1|36891_38007_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MKLLEMHILQTVAPSNLNRDDTGSPKDALFGGFRRARISSQAQKRAVRVAFRDWPLLSEEERAVRTKRLVEELLRRLAGVEEELARRAIENALNALGFGVKEGRTEYLLFLGNRELDALAQGIRENLEALSGEVKGKKKAEVPPELKKALERVLDGGKAVDLALFGRMLADRPELGVDAAAQVAHALSTHKVDREFDFYTAVDDLNPKEDTGAGMMGDVEFYSATLYRYAVVDLDKLVENLQGDKELALKGVLAFLEAFALTLPSGKQNSFAAHNPPLFVAFRAGEGMPRNLATAFEAPLRPKEEVPLSRLSAEALLKEWAKFDRVYGPLEPEWKGALDLTGAEGDGVPRLENLKALKEKAAEAVKVLLGV
>NZ_AP019793.1|WP_143587063.1|38008_38683_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MPTLLLRLQGPLQSWGTRSRFDHRDTWPYPTKSGVVGLLAAALGRDRKEDVSDLAALRMGVRVDRKGVLKVDYQTAQNVLAADLKAKRDVQSWRYFLSDAAFLVGLEGERALLEALHRALKNPRFPLYLGRKSYVPSPPPYLPDGLVEAPLAEALEGYPYLLGGKPPEDLLLALEAEEGRLVYDQPAGPFSERRFAARFVREEVLPKERVPEGPPAWEVARVAH
>NZ_AP019793.1|WP_143587065.1|38669_39305_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MWLTKLVLNPASKAARRDLANPYEMHRTLSKAVSRALEGGEERLLWRLEPTRGLEPPVVLVQTLTEPDWSVLEEGYAQVFPPKPFHPAFRPGQRLRFRLRANPAKRLAATGKRVALKTPAEKVAWLERRLEEGGFRLLEGERGPWVQILQDTFLEVRRKKDGEEAGKLLQVQAVLFEGRLEVVDPERALATLKRGVGPGKALGLGLLSVAP
>NZ_AP019793.1|WP_143587068.1|39314_40292_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MPPVPSARNLKEFPKFRDGLSYLYVEHAVVEREAGGIGIYDQEGLTLAPVAGLGVLFLGPGTRITHAAVRLLAENGCTVAWVGEGMARFYAQGLGDTRSAARLYRQARAWADPALHLEVVMRLYRMRFSEPLPEGLTLEQVRGLEGVRVRNAYARWSRETGVPWYGRSYDRGNWRAADPVNRALSAGASYLYGLAHAAIVSLGFSPALGFIHTGKLLSFVYDIADLYKADYLVPAAFRTVAESEEAVERRVRRALREVIQEGRLLERMAEDLLNLFRGLGLPEEEDPVEEDPTRPGGLWDLEGEVEGGVAYGGDDPGEGAEEPEG
>NZ_AP019793.1|WP_172619236.1|40245_40623_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MVVMILEKVPRSLRGDLTRFLIEVDTGVFVGRISATVRELLWERAVEKAEGGRVALAYRTNNEQGFALRLHGYPDRFLRDFDGIVLVSVRNAEAARKAEKLSRQVERYKKRLAKGSEGDLESQSP
>NZ_AP019793.1|WP_143587071.1|41699_42452_-|5-oxoprolinase-subunit-PxpA
MKVDLNADAGESYGAFAYGHDREIFPLVTSANLACGFHGGSPGRILEAVRLAKAHGVAVGAHPGFPDLVGFGRREMALSPEEVYADVLYQIGALSAFLKAEGLPLHHVKPHGALYLKACRDRETARAIALAVKAFDPGLPLVVLPGTVYEEEARKAGLRVVLEAFPERAYLRNGQLAPRSMPGSWITDPEEAARRALRMVLEGKVETLDGGEVEVRADTLCIHGDNPNAPEVARTVREALEQAGVEVRAF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP019793_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019793_2

40684-41696

TypeI-E

I-E,II-B

Consensus_repeat	Method
GTAGTCCCCACGCGTGTGGGGATGGACCG	PILER-CR
GTAGTCCCCACGCGTGTGGGGATGGACCG	CRISPRCasFinder
GTAGTCCCCACGCGTGTGGGGATGGACCG	CRT

16 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL

The CRISPR arrays of NZ_AP019793_2

>merge|NZ_AP019793|2|40684-41696|PILER-CR,CRISPRCasFinder,CRT
GTAGTCCCCACGCGTGTGGGGATGGACCGGATATGGCTTGGACTTCGTATACGCGTACGTCTCGTAGTCCCCACGCGTGTGGGGATGGACCGTCGCCTGGACCATCAGCGAGCTCGCCGAGGTCGTAGTCCCCACGCGTGTGGGGATGGACCGCTCCTGGGCGAGTTGGACGAGCGCCCGCACGTCGTAGTCCCCACGCGTGTGGGGATGGACCGTCCACCCCGGCGTAGTACCGCCAGAGGATGACCGTAGTCCCCACGCGTGTGGGGATGGACCGGTCTGGATGGTGTGGGCCGTGGTGTACAGCTCGTAGTCCCCACGCGTGTGGGGATGGACCGGCCCTCCGTGTAAGAGGTGCGGATTTTGTGGGCGTAGTCCCCACGCGTGTGGGGATGGACCGCACTGGTGGCATGTGTTGCCCGGGGCGCTCCGCGTAGTCCCCACGCGTGTGGGGATGGACCGAGGCCCTATCCGCCGTGGGGAAGGACTGGAGGCGTAGTCCCCACGCGTGTGGGGATGGACCGTCCTGGGAGGCCCCCCAGGACCTCGCGGACGAGTAGTCCCCACGCGTGTGGGGATGGACCGCTTTCCTCACATTCTGGCGGAAAGCTTTGCTGGTAGTCCCCACGCGTGTGGGGATGGACCGAATCGCCTTGCGGGTAGAGGCGTCCGGCACAAGTAGTCCCCACGCGTGTGGGGATGGACCGCAGGCAGCGTAAGACGCAGCCCGTCACCTGGCGTAGTCCCCACGCGTGTGGGGATGGACCGGAGGGAACCATGAAGCAGGTTAGCACGCAGGCAGTAGTCCTCACGCGTGTGGGGATGGACCGTCCGGGGCCTCCTCCCCACCTTCTAGGGGCTCGTAGTCCCCACGCACGTGGGGGTGGACCGGGGAGCGCCCGGCACCTCGCGGCCTTCAAGGTGTAGTCCCCACGCACGTGGGGATGGACCGATCTCCGATCTAGAGGCTCAGGGGGTGTTCTGGTAGTCCCTACGCCCGTGGGGATGGGCCG

>NZ_AP019793|2|2|40684-41513|PILER-CR
GTAGTCCCCACGCGTGTGGGGATGGACCG	GATATGGCTTGGACTTCGTATACGCGTACGTCTC
GTAGTCCCCACGCGTGTGGGGATGGACCG	TCGCCTGGACCATCAGCGAGCTCGCCGAGGTC
GTAGTCCCCACGCGTGTGGGGATGGACCG	CTCCTGGGCGAGTTGGACGAGCGCCCGCACGTC
GTAGTCCCCACGCGTGTGGGGATGGACCG	TCCACCCCGGCGTAGTACCGCCAGAGGATGACC
GTAGTCCCCACGCGTGTGGGGATGGACCG	GTCTGGATGGTGTGGGCCGTGGTGTACAGCTC
GTAGTCCCCACGCGTGTGGGGATGGACCG	GCCCTCCGTGTAAGAGGTGCGGATTTTGTGGGC
GTAGTCCCCACGCGTGTGGGGATGGACCG	CACTGGTGGCATGTGTTGCCCGGGGCGCTCCGC
GTAGTCCCCACGCGTGTGGGGATGGACCG	AGGCCCTATCCGCCGTGGGGAAGGACTGGAGGC
GTAGTCCCCACGCGTGTGGGGATGGACCG	TCCTGGGAGGCCCCCCAGGACCTCGCGGACGA
GTAGTCCCCACGCGTGTGGGGATGGACCG	CTTTCCTCACATTCTGGCGGAAAGCTTTGCTG
GTAGTCCCCACGCGTGTGGGGATGGACCG	AATCGCCTTGCGGGTAGAGGCGTCCGGCACAA
GTAGTCCCCACGCGTGTGGGGATGGACCG	CAGGCAGCGTAAGACGCAGCCCGTCACCTGGC
GTAGTCCCCACGCGTGTGGGGATGGACCG	GAGGGAACCATGAAGCAGGTTAGCACGCAGGCA
GTAGTCCTCACGCGTGTGGGGATGGACCG

>NZ_AP019793|2|2|40684-41696|CRISPRCasFinder
GTAGTCCCCACGCGTGTGGGGATGGACCG	GATATGGCTTGGACTTCGTATACGCGTACGTCTC
GTAGTCCCCACGCGTGTGGGGATGGACCG	TCGCCTGGACCATCAGCGAGCTCGCCGAGGTC
GTAGTCCCCACGCGTGTGGGGATGGACCG	CTCCTGGGCGAGTTGGACGAGCGCCCGCACGTC
GTAGTCCCCACGCGTGTGGGGATGGACCG	TCCACCCCGGCGTAGTACCGCCAGAGGATGACC
GTAGTCCCCACGCGTGTGGGGATGGACCG	GTCTGGATGGTGTGGGCCGTGGTGTACAGCTC
GTAGTCCCCACGCGTGTGGGGATGGACCG	GCCCTCCGTGTAAGAGGTGCGGATTTTGTGGGC
GTAGTCCCCACGCGTGTGGGGATGGACCG	CACTGGTGGCATGTGTTGCCCGGGGCGCTCCGC
GTAGTCCCCACGCGTGTGGGGATGGACCG	AGGCCCTATCCGCCGTGGGGAAGGACTGGAGGC
GTAGTCCCCACGCGTGTGGGGATGGACCG	TCCTGGGAGGCCCCCCAGGACCTCGCGGACGA
GTAGTCCCCACGCGTGTGGGGATGGACCG	CTTTCCTCACATTCTGGCGGAAAGCTTTGCTG
GTAGTCCCCACGCGTGTGGGGATGGACCG	AATCGCCTTGCGGGTAGAGGCGTCCGGCACAA
GTAGTCCCCACGCGTGTGGGGATGGACCG	CAGGCAGCGTAAGACGCAGCCCGTCACCTGGC
GTAGTCCCCACGCGTGTGGGGATGGACCG	GAGGGAACCATGAAGCAGGTTAGCACGCAGGCA
GTAGTCCTCACGCGTGTGGGGATGGACCG	TCCGGGGCCTCCTCCCCACCTTCTAGGGGCTC
GTAGTCCCCACGCACGTGGGGGTGGACCG	GGGAGCGCCCGGCACCTCGCGGCCTTCAAGGT
GTAGTCCCCACGCACGTGGGGATGGACCG	ATCTCCGATCTAGAGGCTCAGGGGGTGTTCTG
GTAGTCCCTACGCCCGTGGGGATGGGCCG

>NZ_AP019793|2|2|40684-41696|CRT
GTAGTCCCCACGCGTGTGGGGATGGACCG	GATATGGCTTGGACTTCGTATACGCGTACGTCTC
GTAGTCCCCACGCGTGTGGGGATGGACCG	TCGCCTGGACCATCAGCGAGCTCGCCGAGGTC
GTAGTCCCCACGCGTGTGGGGATGGACCG	CTCCTGGGCGAGTTGGACGAGCGCCCGCACGTC
GTAGTCCCCACGCGTGTGGGGATGGACCG	TCCACCCCGGCGTAGTACCGCCAGAGGATGACC
GTAGTCCCCACGCGTGTGGGGATGGACCG	GTCTGGATGGTGTGGGCCGTGGTGTACAGCTC
GTAGTCCCCACGCGTGTGGGGATGGACCG	GCCCTCCGTGTAAGAGGTGCGGATTTTGTGGGC
GTAGTCCCCACGCGTGTGGGGATGGACCG	CACTGGTGGCATGTGTTGCCCGGGGCGCTCCGC
GTAGTCCCCACGCGTGTGGGGATGGACCG	AGGCCCTATCCGCCGTGGGGAAGGACTGGAGGC
GTAGTCCCCACGCGTGTGGGGATGGACCG	TCCTGGGAGGCCCCCCAGGACCTCGCGGACGA
GTAGTCCCCACGCGTGTGGGGATGGACCG	CTTTCCTCACATTCTGGCGGAAAGCTTTGCTG
GTAGTCCCCACGCGTGTGGGGATGGACCG	AATCGCCTTGCGGGTAGAGGCGTCCGGCACAA
GTAGTCCCCACGCGTGTGGGGATGGACCG	CAGGCAGCGTAAGACGCAGCCCGTCACCTGGC
GTAGTCCCCACGCGTGTGGGGATGGACCG	GAGGGAACCATGAAGCAGGTTAGCACGCAGGCA
GTAGTCCTCACGCGTGTGGGGATGGACCG	TCCGGGGCCTCCTCCCCACCTTCTAGGGGCTC
GTAGTCCCCACGCACGTGGGGGTGGACCG	GGGAGCGCCCGGCACCTCGCGGCCTTCAAGGT
GTAGTCCCCACGCACGTGGGGATGGACCG	ATCTCCGATCTAGAGGCTCAGGGGGTGTTCTG
GTAGTCCCTACGCCCGTGGGGATGGGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019793.1\|WP_143587058.1\|34918_36400_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_AP019793.1\|WP_143587065.1\|38669_39305_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795
NZ_AP019793.1\|WP_143587055.1\|32109_34869_+\|CRISPR-associated-endonuclease-Cas3''	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NZ_AP019793.1\|WP_143587061.1\|36891_38007_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_AP019793.1\|WP_172619236.1\|40245_40623_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NZ_AP019793.1\|WP_143587073.1\|44451_44907_-\|TRAP-transporter-small-permease-subunit	unknown	unknown	gnl\|CDD\|377284
NZ_AP019793.1\|WP_143587053.1\|31123_32113_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_AP019793.1\|WP_143587075.1\|44906_45863_-\|TRAP-transporter-substrate-binding-protein-DctP	unknown	unknown	gnl\|CDD\|270320
NZ_AP019793.1\|WP_014630451.1\|46881_47658_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
NZ_AP019793.1\|WP_014630446.1\|42464_43151_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293815
NZ_AP019793.1\|WP_143587077.1\|49624_50458_-\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	unknown	unknown	gnl\|CDD\|234823
NZ_AP019793.1\|WP_143587071.1\|41699_42452_-\|5-oxoprolinase-subunit-PxpA	unknown	unknown	gnl\|CDD\|377121
NZ_AP019793.1\|WP_143587068.1\|39314_40292_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_AP019793.1\|WP_014630452.1\|47644_48418_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224041
NZ_AP019793.1\|WP_014630453.1\|48716_49526_-\|cyclase-family-protein	unknown	unknown	gnl\|CDD\|224790
NZ_AP019793.1\|WP_014630447.1\|43153_44455_-\|TRAP-transporter-large-permease-subunit	unknown	unknown	gnl\|CDD\|129868
NZ_AP019793.1\|WP_143587059.1\|36396_36888_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|237559
NZ_AP019793.1\|WP_143587079.1\|50454_52740_-\|FdhF/YdeP-family-oxidoreductase	unknown	unknown	gnl\|CDD\|239168
NZ_AP019793.1\|WP_143587051.1\|28118_29063_-\|DNA-methylase-N-4/N-6-domain-containing-protein	unknown	unknown	gnl\|CDD\|334588
NZ_AP019793.1\|WP_143587063.1\|38008_38683_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|378243

Protein	Function_ID	Function_description	E-value
NZ_AP019793.1\|WP_143587058.1\|34918_36400_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	1.24634e-120
NZ_AP019793.1\|WP_143587065.1\|38669_39305_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	1.43154e-70
NZ_AP019793.1\|WP_143587055.1\|32109_34869_+\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.5398e-105
NZ_AP019793.1\|WP_143587061.1\|36891_38007_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.36921e-155
NZ_AP019793.1\|WP_172619236.1\|40245_40623_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	9.91833e-39
NZ_AP019793.1\|WP_143587073.1\|44451_44907_-\|TRAP-transporter-small-permease-subunit	gnl\|CDD\|377284	pfam04290, DctQ, Tripartite ATP-independent periplasmic transporters, DctQ component. The function of the members of this family is unknown, but DctQ homologs are invariably found in the tripartite ATP-independent periplasmic transporters.	1.84178e-12
NZ_AP019793.1\|WP_143587053.1\|31123_32113_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	4.14342e-34
NZ_AP019793.1\|WP_143587075.1\|44906_45863_-\|TRAP-transporter-substrate-binding-protein-DctP	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.8074e-136
NZ_AP019793.1\|WP_014630451.1\|46881_47658_-\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	4.73965e-74
NZ_AP019793.1\|WP_014630446.1\|42464_43151_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293815	cd07729, AHL_lactonase_MBL-fold, quorum-quenching N-acyl-homoserine lactonase, MBL-fold metallo-hydrolase domain. Acyl Homoserine Lactones (also known as AHLs) are signal molecules which coordinate gene expression in quorum sensing, in many Gram-negative bacteria. Quorum-quenching N-acyl-homoserine lactonase (also known as AHL lactonase, N-acyl-L-homoserine lactone hydrolase, EC 3.1.1.81) catalyzes the hydrolysis and opening of the homoserine lactone rings of AHLs, a reaction that can block quorum sensing. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	5.07561e-33
NZ_AP019793.1\|WP_143587077.1\|49624_50458_-\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	gnl\|CDD\|234823	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD.	3.88006e-89
NZ_AP019793.1\|WP_143587071.1\|41699_42452_-\|5-oxoprolinase-subunit-PxpA	gnl\|CDD\|377121	pfam03746, LamB_YcsF, LamB/YcsF family. This family includes LamB. The lam locus of Aspergillus nidulans consists of two divergently transcribed genes, lamA and lamB, involved in the utilisation of lactams such as 2-pyrrolidinone. Both genes are under the control of the positive regulatory gene amdR and are subject to carbon and nitrogen metabolite repression. The exact molecular function of the proteins in this family is unknown.	2.94364e-141
NZ_AP019793.1\|WP_143587068.1\|39314_40292_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.60459e-144
NZ_AP019793.1\|WP_014630452.1\|47644_48418_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	4.153e-126
NZ_AP019793.1\|WP_014630453.1\|48716_49526_-\|cyclase-family-protein	gnl\|CDD\|224790	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism].	7.46588e-66
NZ_AP019793.1\|WP_014630447.1\|43153_44455_-\|TRAP-transporter-large-permease-subunit	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	7.26229e-94
NZ_AP019793.1\|WP_143587059.1\|36396_36888_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|237559	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional.	3.74784e-69
NZ_AP019793.1\|WP_143587079.1\|50454_52740_-\|FdhF/YdeP-family-oxidoreductase	gnl\|CDD\|239168	cd02767, MopB_ydeP, The MopB_ydeP CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_AP019793.1\|WP_143587051.1\|28118_29063_-\|DNA-methylase-N-4/N-6-domain-containing-protein	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	5.78509e-08
NZ_AP019793.1\|WP_143587063.1\|38008_38683_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|378243	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum.	7.17638e-54

>NZ_AP019793.1|WP_172619236.1|40245_40623_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MVVMILEKVPRSLRGDLTRFLIEVDTGVFVGRISATVRELLWERAVEKAEGGRVALAYRTNNEQGFALRLHGYPDRFLRDFDGIVLVSVRNAEAARKAEKLSRQVERYKKRLAKGSEGDLESQSP
>NZ_AP019793.1|WP_143587068.1|39314_40292_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MPPVPSARNLKEFPKFRDGLSYLYVEHAVVEREAGGIGIYDQEGLTLAPVAGLGVLFLGPGTRITHAAVRLLAENGCTVAWVGEGMARFYAQGLGDTRSAARLYRQARAWADPALHLEVVMRLYRMRFSEPLPEGLTLEQVRGLEGVRVRNAYARWSRETGVPWYGRSYDRGNWRAADPVNRALSAGASYLYGLAHAAIVSLGFSPALGFIHTGKLLSFVYDIADLYKADYLVPAAFRTVAESEEAVERRVRRALREVIQEGRLLERMAEDLLNLFRGLGLPEEEDPVEEDPTRPGGLWDLEGEVEGGVAYGGDDPGEGAEEPEG
>NZ_AP019793.1|WP_143587065.1|38669_39305_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MWLTKLVLNPASKAARRDLANPYEMHRTLSKAVSRALEGGEERLLWRLEPTRGLEPPVVLVQTLTEPDWSVLEEGYAQVFPPKPFHPAFRPGQRLRFRLRANPAKRLAATGKRVALKTPAEKVAWLERRLEEGGFRLLEGERGPWVQILQDTFLEVRRKKDGEEAGKLLQVQAVLFEGRLEVVDPERALATLKRGVGPGKALGLGLLSVAP
>NZ_AP019793.1|WP_143587063.1|38008_38683_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MPTLLLRLQGPLQSWGTRSRFDHRDTWPYPTKSGVVGLLAAALGRDRKEDVSDLAALRMGVRVDRKGVLKVDYQTAQNVLAADLKAKRDVQSWRYFLSDAAFLVGLEGERALLEALHRALKNPRFPLYLGRKSYVPSPPPYLPDGLVEAPLAEALEGYPYLLGGKPPEDLLLALEAEEGRLVYDQPAGPFSERRFAARFVREEVLPKERVPEGPPAWEVARVAH
>NZ_AP019793.1|WP_143587061.1|36891_38007_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MKLLEMHILQTVAPSNLNRDDTGSPKDALFGGFRRARISSQAQKRAVRVAFRDWPLLSEEERAVRTKRLVEELLRRLAGVEEELARRAIENALNALGFGVKEGRTEYLLFLGNRELDALAQGIRENLEALSGEVKGKKKAEVPPELKKALERVLDGGKAVDLALFGRMLADRPELGVDAAAQVAHALSTHKVDREFDFYTAVDDLNPKEDTGAGMMGDVEFYSATLYRYAVVDLDKLVENLQGDKELALKGVLAFLEAFALTLPSGKQNSFAAHNPPLFVAFRAGEGMPRNLATAFEAPLRPKEEVPLSRLSAEALLKEWAKFDRVYGPLEPEWKGALDLTGAEGDGVPRLENLKALKEKAAEAVKVLLGV
>NZ_AP019793.1|WP_143587059.1|36396_36888_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSQGERFLDWLRRLQGQKAWTAARAALRRSLAFPPGAYPRAMPYVEPFVAEEGWRREAHYLVAALYALKDGDHQVGRTLARALWEKAQGSASVEKRFLALLEADRDQIAFRLRQAVALVEGGVDFARLLDDLLRWFSPERHVQARWAREFYDAEASEEEKKEV
>NZ_AP019793.1|WP_143587058.1|34918_36400_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MRSLAKFNLIDEPWIPVLKGGRVVEVGIGEALLRAHEFTRIETPSPLEEAALHRLLLAVLHRALRGPRRLEDVLDWWREGGFPQDPIRDYLNRFRDRFFLFHPEAPFLQVADLPEENPLPWSKLLPELASGNNPTLFDHTTEENLPKATYAQAARALLVHQAFAPGGLLRRYGVGSAKDAPVARPALFLPTGRNLLETLLLNLVPYGPEGDAPIWEEPPLRFADLEGGKTAWPLSGRTRVYTWPARGVRFLDEGNGVRFMGYGPGVEPLETPHRDPMVAQRLDAKGNLLVLRLSEERSFWRDFSAMLPRQGGKVAATLEHAENLQGELEESEEVRVNLRVLGQVSDQAKILDVRREVYPLPSGLLTPRAEENLEKALKMAEVLGQGLGRLALRVAQAVVGKRDHKELADFARSLPLERLYWHVLDGAFPGFFARVEEKASLDLWREALRGAALEAWKATRRFLGTGARHLKALAQGEQEFGRLLGELGEEVRT
>NZ_AP019793.1|WP_143587055.1|32109_34869_+|CRISPR-associated-endonuclease-Cas3''
MSVEEAALALWAKSGDPFHPLLAHMLDTAAVALAVLRREPPRTRTLYAQDWGLPEEEAVRWVALLVGLHDLGKASPVFQAGWEEGKERVQRAGLPFGELLDWVAHGVFTELFLRRLLKEKGLPERAANDLAAALGAHHGFPANAEEKSRARRHLKAEDPLWKEARRWLLEEVFRRLGAPLPPSEGNGEARPEAVLRVMALASFADWVASDPSLFPYGRDPRRGNYLKEALRLAQEALNRLGWPAFAKAQRREFGELFPYIPKPNALQEKVPALLEGACTPVLLLVEAPMGMGKTEAALYAHHLLQAGLGHRGLYVALPTQATANGLFPRVRGFLERLGEGSRLELQLQHGTALLNPHYAELLERAAPRQVGEEEEGGAVASAWFSARKRAMLAPYGVGTLDQALLGVLRVKHHFVRLWGLMNRVVVLDEVHAYDVYTSGLLQALLRWLRALGSSAVVMTATLPPSRRRALLEAWAGKEVEGQDLGPYPRVVLVGEGVKARSLPPAREVEVALEVLREVDVEPLAQRLKGALPGAVGAMVNTVDRAQALYRALGEGKRLTLGELAQILGKEGGEAWQEVLKALPERKDEVVGKVLPDGTRVFLLHARFPAEERALREGVALALFGKGGPRPKRAILVATQVAEQSLDLDVDLLYTDLAPIDLLFQRSGRLHRHERPRPEEHARPRLLLGVPGDLDFGKPLYWDKVYEDYVLLATWRALSGRDRLRVPGDLEALLEEVYEGEDPGRFPEDLRERAKKSLKALQERRDREANTARRLSLSELGRLLAYWDEGALVAQERLEDDEEKAETQRLLTRLGDPSVAVVPLFRVGEGLFLDREGRRRAPLRGEVSREEAEALFRRAVRLSRFPLPQELLKEEPPPAWRKSGLLRGLRSLEVGRVFGSGERAFRVELDAELGVVYLPV
>NZ_AP019793.1|WP_143587053.1|31123_32113_+|WYL-domain-containing-protein
MGQEAKSARLLQMAEALKLRPMRVGELARRFGVSERTVERDLEALLDLGFPVERLARGLYRIADRPPSLHPIEALALFAAGRLLYHQAPTRQYRMALDKLARMLPEPLRGLLLRSTQGLEARQGESRTLEMVARALLERRVLAFEYRSGGSKNWRPKELLVYFLEANRANLGLYAIGYERTYHRAVLTFKLARMRHARLLDETYEIPPDFDPNAYLRRAWGVVGVREEGVEVRLRFTPEAAWRVLEGDYPGLHLEEELPDGSLLARLEAAPFKGGVPWEVLAWVQSFGPRVEVLSPPELRRLWLEEAERVLALYGNRQEVSGSPPKVRA
>NZ_AP019793.1|WP_143587051.1|28118_29063_-|DNA-methylase-N-4/N-6-domain-containing-protein
MKRNAWEVYGEVLKTARELGLEGEEQEVAKALLAWPKERFHAFAARVGLKAKYLRHDLLPIAFLPEPLREALQGGLPLREAHRLHRLLKRGELSLQDLTGKDPKALMALPARPGEVDPRLPVWFFPPEPWEEALPMAVARALVRLYTKEGELVLDPMAGRGTVVEAARALGRRAWGGDIAPRGPLVERAHIRNLPQRFRKEAALVVLHPPTFSTWLREEGYREEAEERYGEYIRHISSFLDLCRPALAPGGKLVLVARPRRALTPKDLEAGHDFFLAPWERALAEADFRPLSYHLAVSQDGRQDWHLFVGEARG
>NZ_AP019793.1|WP_143587071.1|41699_42452_-|5-oxoprolinase-subunit-PxpA
MKVDLNADAGESYGAFAYGHDREIFPLVTSANLACGFHGGSPGRILEAVRLAKAHGVAVGAHPGFPDLVGFGRREMALSPEEVYADVLYQIGALSAFLKAEGLPLHHVKPHGALYLKACRDRETARAIALAVKAFDPGLPLVVLPGTVYEEEARKAGLRVVLEAFPERAYLRNGQLAPRSMPGSWITDPEEAARRALRMVLEGKVETLDGGEVEVRADTLCIHGDNPNAPEVARTVREALEQAGVEVRAF
>NZ_AP019793.1|WP_014630446.1|42464_43151_-|MBL-fold-metallo-hydrolase
MKVIPVHTGFPGRSHRGYLGLSGAYLVVGSRFLLYDTLGFGEREGLYARLEALGVSPLDVTGVVLSHLHFDHAANADLFPWAEVYVHEAELRHAERVAKDPRLDPACLAHLPKALPRLTAVPEGPLEEGLSLLHLPGHTPGLLGLAVEGVGVLASDAVKSRFDLEGPPAPPCLDPERALKSRERLYRFPRLFPGHDVPLRREGDRFLPEGEACLEVALPHGAKVTLKL
>NZ_AP019793.1|WP_014630447.1|43153_44455_-|TRAP-transporter-large-permease-subunit
MSLLAAGLVLVALLFLLLALGVYVGLALLLVGTAGLALFTTAPPGPNVATALWTSTSSWSLAALPLFVWMGEILYRSRLAQELFQGLAPLLGRLPGGLLHVNVVASALFAAVIGSSAATTATVGRFTLPELLRQGYPKALALGSLAGAGTLGFLIPPSIVMIVYGVMAEVSVARLFMAGVVPGLLLTLLFMLTVALLAHRHRKALPRGPSPASREALKGLLSVLPVLFLILLVLGSIYLGVATPTEAAAIGVAGAFLLTVLRREFGLELFRESLLGAVRTTSMIGLILAGAGVLTLAMGFTGIPRALATWAVEAGITPIALVLFLSLVYILLGWFLDGISIVVLTISVILPVVKAIGLDPLWFGVYLVLMVELAQITPPVGFNLFVLQSLSGEDLFRIARYSLPFMGVLLLMVALLVAFPGLATWLPRTMTGG
>NZ_AP019793.1|WP_143587073.1|44451_44907_-|TRAP-transporter-small-permease-subunit
MLKGLYRLSELLALLLGLFVLLVILAQVVGRFLGFVVPSALELAGFATAGLIFLGLGPTFRAGGHIRVELLLRRLPPKARAPLGRTALGLGAAASLYAAFHLWAKTLESLRFGDLAPGLLPLPLWIPLAVVAFGMSVFAVALLEALLREAP
>NZ_AP019793.1|WP_143587075.1|44906_45863_-|TRAP-transporter-substrate-binding-protein-DctP
MKRLVTALSLLALGALAQTWNMATPYPPGNFHTQNILQFVKEVEEATGGRVKITVHPGGSLFPHPQILPAVRNGQVQMGEVLMSLLANENPLFNLDSIPFVVSGYEDAWRLYQAQRPEVEKWLAQRGVVFLYAVPWPPQGLYTKKPVNSAQDLKGLRFRAYNPATARLAELLGMTPVQVEAADIPQAFATGIVEAMITSPTTGVDSQAWDFARYFYDVKAWIPKNMVVIGRRAFESLSPQDREALLQAAKRAEERGWKMSQEEEAKALKTLAQRGMQVVKPSPQLMADLKKAGETMILEWQRQAGATGIRVYRQYLGR
>NZ_AP019793.1|WP_014630451.1|46881_47658_-|ABC-transporter-permease
MRGLRVRLWQGGLLLGFLLLWEWASRTGRIDPFFFSYPSEIAQRVWRWFATGEVYPHLYVTTVEMLLAFALGTLLGVALGLWLALSPKAAAVLDPYVKALNAIPRVVLAPIFTLWFGLGILSKVALGVTLVFFVAFFNTYQGVKEVPPVVLQNARLLGARPSHLLRHVYLPAAASWIFSSLRTSIGFAVIGAVVGEYLGSAAGLGYLIAQAEGVFDTTGVFAGMVVLMAFVLVLDALVGAVERRLLVWRPKEREGGTA
>NZ_AP019793.1|WP_014630452.1|47644_48418_-|ABC-transporter-ATP-binding-protein
MSFLEFRRLSVAFGDYVAVEGVSLQVAEGEFVSLVGPTGCGKSTLLNAAAGLLSPSEGEVWVAGRPLKGLNPVAGYLFQQDAILPWKTALDNVALPLVFRGTPWGEARERARAWLAKVGLERFAQRFPHQLSGGQRKRVGLAQVLIADPKLLLMDEPFSALDVQTRQLMENELLRLWQEDRKTVLFVTHDLEEAIALSDRVVVMAAGPRSRPIGEFPIPLPRPRDVAEVRLTPEFLRLHREIWELLRGEVMRAHAGA
>NZ_AP019793.1|WP_014630453.1|48716_49526_-|cyclase-family-protein
MCAPLVMEQVARSLSRRSFLASGLAALAGAALAQAQVPGKAFSRAVDLTHELTPEIPLFPGAEPMRITTLVTVRQNGYYGNRLDLWEHSGTHMDAPAHFVEGAPTAEKLPVGVLIAPLAVIHIHEKAAKDPDAQVTPDDLLAYERRYGRLPKGAFVAMHSGWEARWKDPKAFLNQDASGTLHFPGFSPEAAEFLVREREIVGIGVDTLSLDFGPSKDFKTHVTVLGAGKYGLENLANLAQVPPSGALIFVGGPKHQKASGGPVRAVAVW
>NZ_AP019793.1|WP_143587077.1|49624_50458_-|formate-dehydrogenase-accessory-sulfurtransferase-FdhD
MRGKARVRVARLEGGRWREVRDEVAAEAPLEIRLRYRDEVASLGVVLRTPGQDAELAAGLLYTEGLLQDPKEVLAIAPCADGSLPPEAREGVIQVFLRHPLPPPPRRHLALTAACGACGREALPDPGRLGLSPPPPLAVDPDLLLALPERLGEAQRLFRATGGLHAAALFDREGRLVALREDVGRHNALDKLIGWAFLQGKLPLHDHILLVSGRAGYELLVKAVAAGIPVFCAVSAPTSLAVALAQAYGLTLVGFLRPGRMNVYAGRERVGPPRGPT
>NZ_AP019793.1|WP_143587079.1|50454_52740_-|FdhF/YdeP-family-oxidoreductase
MAWLNPFWSSPKAYVRPPKRGLAPELWASRIPFTHLENFYEVFRALWENRDNLPYAWRILKDGVCDGCALGTSGLEDWTLHGVHLCNVRLRLLRLNTLPPLDPKVLEDVEALKGRKSRELRRLGRLPYPMLRRKGERGFRRVSWDEALGLAAEYLRHHLPEGAFFYLTSRGVPNETYYVVQKAVRALGCNHVDNAARICHSPSTVVLKEALGVAATTCSYTDLIGTDLVVFLGSNVANNQPVMMKYLYHAKKAGTKVAVVNPYREPGMERYFVPSDLESALFGTRIADRFFQILPGGDIAFLHGAAKWMLEEGWVDPGFIRAHTAGFEAYKALLEAIPFAELEKAAGVSREEMRAFAEMVGRAERAVFVWGMGITQHTHGEDNVRAIVNLALLKGFVGREGCGLMPIRGHSGVQGGAEMGAYATAFPGGLPVNPENARRLAELWGFPVPDRPGLTTPEALDRALEGKLGVLWAIGGDFREVMPDPEAVEEALRRVPLRVHQDIVLSSQMLLEPGECVLLLPATTRYEVPGGVTETSTERRVIFSPEIPGPRPPEARPEWEVFQELVHRLRPELKDRFRFASTAEIREEIARVIPLYEGIQRLKAKGDQFQYGGRRLCEGWRFPTPDGKAHFRPVPLPQKEVPEGAFRVVTRRGKQFNSIVHEDQDPLTGAFRDAVYMNPKDAARLGLKPGDPVVLENAFGRYAGRVYLAEVKEGTLEVHWPEGNVLVDPKARSPLAHIPAYKEILAHLRRGEAEAPSPLRP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP019793_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019793_3

59957-60297

Unclear

III-A

Consensus_repeat	Method
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	PILER-CR
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	CRISPRCasFinder
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	CRT

4 spacers

The CRISPR arrays of NZ_AP019793_3

>merge|NZ_AP019793|3|59957-60297|PILER-CR,CRISPRCasFinder,CRT
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGACGAGGTGCGAGATGCGTAACTGGCGCGCGGCTTGGTACGAGTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGACTGAGCCTGAGCCTGTACCGAAGTCTTCTTTGCCATAGTGTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGACCCCTTGCCGGAGGCGTAGGCCTTGAGCGTAGCTTTCACCCCTCGTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGACTACCTAAGCCTTACCATGGGTAGCGATCCCAATACTCCTCCGTTGCAAGGGATTGAGCCCCGTAAGGGGATTGATAC

>NZ_AP019793|3|3|59957-60220|PILER-CR
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	GAGGTGCGAGATGCGTAACTGGCGCGCGGCTTGGTACGA
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	TGAGCCTGAGCCTGTACCGAAGTCTTCTTTGCCATAGT
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	CCCTTGCCGGAGGCGTAGGCCTTGAGCGTAGCTTTCACCCCTC
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC

>NZ_AP019793|3|3|59957-60297|CRISPRCasFinder
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	GAGGTGCGAGATGCGTAACTGGCGCGCGGCTTGGTACGA
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	TGAGCCTGAGCCTGTACCGAAGTCTTCTTTGCCATAGT
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	CCCTTGCCGGAGGCGTAGGCCTTGAGCGTAGCTTTCACCCCTC
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	TACCTAAGCCTTACCATGGGTAGCGATCCCAATACTCCTCC
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGATAC

>NZ_AP019793|3|3|59957-60297|CRT
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	GAGGTGCGAGATGCGTAACTGGCGCGCGGCTTGGTACGA
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	TGAGCCTGAGCCTGTACCGAAGTCTTCTTTGCCATAGT
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	CCCTTGCCGGAGGCGTAGGCCTTGAGCGTAGCTTTCACCCCTC
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC	TACCTAAGCCTTACCATGGGTAGCGATCCCAATACTCCTCC
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGATAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019793.1\|WP_143587092.1\|58658_59114_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|379205
NZ_AP019793.1\|WP_143587104.1\|64479_65604_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_AP019793.1\|WP_143587370.1\|70031_70853_+\|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl\|CDD\|110924
NZ_AP019793.1\|WP_143587090.1\|58435_58678_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|273625
NZ_AP019793.1\|WP_143587098.1\|62327_62987_-\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|223816
NZ_AP019793.1\|WP_143587108.1\|67531_68458_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_AP019793.1\|WP_011174466.1\|57873_58104_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NZ_AP019793.1\|WP_143587106.1\|65678_67535_+\|amino-acid-transporter	unknown	unknown	gnl\|CDD\|372624
NZ_AP019793.1\|WP_143587096.1\|61059_62331_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_AP019793.1\|WP_143587083.1\|56721_56982_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|273625
NZ_AP019793.1\|WP_143587366.1\|53611_54943_-\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|349398
NZ_AP019793.1\|WP_143587112.1\|70947_72330_+\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
NZ_AP019793.1\|WP_143587102.1\|63546_64470_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271320
NZ_AP019793.1\|WP_143587085.1\|57472_57877_-\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350220
NZ_AP019793.1\|WP_143587110.1\|68577_68778_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019793.1\|WP_143587079.1\|50454_52740_-\|FdhF/YdeP-family-oxidoreductase	unknown	unknown	gnl\|CDD\|239168
NZ_AP019793.1\|WP_143587100.1\|62987_63440_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|365823
NZ_AP019793.1\|WP_143587081.1\|55064_56285_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_AP019793.1\|WP_172619238.1\|59725_59905_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019793.1\|WP_172619237.1\|56329_56725_-\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350250

Protein	Function_ID	Function_description	E-value
NZ_AP019793.1\|WP_143587104.1\|64479_65604_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	1.47578e-71
NZ_AP019793.1\|WP_143587370.1\|70031_70853_+\|ATP-dependent-Clp-protease-proteolytic-subunit	gnl\|CDD\|110924	pfam01972, SDH_sah, Serine dehydrogenase proteinase. This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan.	1.92006e-130
NZ_AP019793.1\|WP_143587090.1\|58435_58678_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|273625	TIGR01439, Uncharacterized_protein_Mb2626, looped-hinge helix DNA binding domain, AbrB family. This DNA-binding domain family includes AbrB, a transition state regulator in Bacillus subtilis, whose DNA-binding domain structure in solution was determined by NMR. The domain binds DNA as a dimer in what is termed a looped-hinge helix fold. Some members of the family have two copies of the domain in tandem. The domain is found usually at the N-terminus of a small protein. This model excludes members of family TIGR02609. [Regulatory functions, DNA interactions].	0.000433769
NZ_AP019793.1\|WP_143587108.1\|67531_68458_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	7.64772e-35
NZ_AP019793.1\|WP_011174466.1\|57873_58104_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	1.09542e-05
NZ_AP019793.1\|WP_143587106.1\|65678_67535_+\|amino-acid-transporter	gnl\|CDD\|372624	pfam13520, AA_permease_2, Amino acid permease.	3.48777e-06
NZ_AP019793.1\|WP_143587096.1\|61059_62331_-\|HAMP-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	8.74002e-35
NZ_AP019793.1\|WP_143587083.1\|56721_56982_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|273625	TIGR01439, Uncharacterized_protein_Mb2626, looped-hinge helix DNA binding domain, AbrB family. This DNA-binding domain family includes AbrB, a transition state regulator in Bacillus subtilis, whose DNA-binding domain structure in solution was determined by NMR. The domain binds DNA as a dimer in what is termed a looped-hinge helix fold. Some members of the family have two copies of the domain in tandem. The domain is found usually at the N-terminus of a small protein. This model excludes members of family TIGR02609. [Regulatory functions, DNA interactions].	8.48408e-07
NZ_AP019793.1\|WP_143587081.1\|55064_56285_+\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	5.63939e-88
NZ_AP019793.1\|WP_143587366.1\|53611_54943_-\|CAP-domain-containing-protein	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	2.90847e-17
NZ_AP019793.1\|WP_143587102.1\|63546_64470_+\|hypothetical-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	5.30118e-14
NZ_AP019793.1\|WP_143587098.1\|62327_62987_-\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.47548e-69
NZ_AP019793.1\|WP_143587112.1\|70947_72330_+\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	9.84203e-176
NZ_AP019793.1\|WP_143587079.1\|50454_52740_-\|FdhF/YdeP-family-oxidoreductase	gnl\|CDD\|239168	cd02767, MopB_ydeP, The MopB_ydeP CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_AP019793.1\|WP_143587100.1\|62987_63440_-\|c-type-cytochrome	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	3.71003e-11
NZ_AP019793.1\|WP_143587092.1\|58658_59114_+\|PIN-domain-containing-protein	gnl\|CDD\|379205	pfam13470, PIN_3, PIN domain. Members of this family of bacterial domains are predicted to be RNases (from similarities to 5'-exonucleases).	4.5059e-08
NZ_AP019793.1\|WP_143587085.1\|57472_57877_-\|PIN-domain-containing-protein	gnl\|CDD\|350220	cd09872, PIN_Sll0205-like, VapC-like PIN domain of Sll0205 protein and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Synechocystis sp. (strain PCC 6803) Sll0205 protein and other uncharacterized homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	4.81589e-39
NZ_AP019793.1\|WP_172619237.1\|56329_56725_-\|PIN-domain-containing-protein	gnl\|CDD\|350250	cd18683, PIN_VapC-like, Uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.72728e-28

>NZ_AP019793.1|WP_172619238.1|59725_59905_-|hypothetical-protein
MRKMKLGIYTRRITGVFEDLHRCKATRGRGDEKKKCIFAFRKGKTGFQDPRPVVRTRAL
>NZ_AP019793.1|WP_143587092.1|58658_59114_+|PIN-domain-containing-protein
MPPSPVRLHRLFLDANVLFAACWQEGRARALLELAPRAKVLLLTSPHALEEARRNLEAKRPEALECLQRIRERVQTVPEAPMALVRKALAEGLPLKDAPILACAWSAGAEALVTGDRRHFGHLMGRRVRGLWVVSLAEALAGVLDLLEDKG
>NZ_AP019793.1|WP_143587090.1|58435_58678_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MELAKLSRKGQLSIPKRLLKALGVEGEAYFLVELAPEGGLLLRPAAVYPLEVYTEERLQELLAEDTLTEEERARLAALAR
>NZ_AP019793.1|WP_011174466.1|57873_58104_-|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MTLVMKVSKSYFKAHALELLRRVEATGEPLILTDRGRPVLEVRPYREEDPREKLLGTLLRYEDPTEPTGEAWEALG
>NZ_AP019793.1|WP_143587085.1|57472_57877_-|PIN-domain-containing-protein
MKGPLVLDTHAWVWYLASPQVLPKGLVRVLDEARAREALYVSAITPWEVAVLAQKGRIAFSLEPRRWLEEALRVRGIGVVPLDAGIALEAAHLDLPHPDPADRFILATALRLGAVLVTKDERLRRYAKARSLWR
>NZ_AP019793.1|WP_143587083.1|56721_56982_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MPYLVGPKGQVVIAKDIRERLGIRPGWRVIQRLVDDHVELYFLPPPHRASLKGLLRDKIRGTVSEEAWAEARERAWRASWSEEGEG
>NZ_AP019793.1|WP_172619237.1|56329_56725_-|PIN-domain-containing-protein
MKALVDTSLLVRYLTGDPPHLAERAAQVLDGEETLGLTEVALVETAYVLESVYGVPRKEVVDALLALLQKENLKAVGGDKDLWMRALLLCRPSKRVSFGDALIWAAALASGVRRVYTLDACFPREEIQVGP
>NZ_AP019793.1|WP_143587081.1|55064_56285_+|IS256-family-transposase
MFNRGAHLGTRRCPVDQDTLRILLREAVRETVAEVLQTVLELDRTAFLQVHGGRRNGYYPRKLETTFGQVDLKVPRDRESRYYPAFLKPYARRLVDVGEVAVALYAAGVSQRKAAEILSLLLGHRYSHETLSALTDQVLEAAGAFRTRLLPEEMAFVYLDGLSLKVFREGEGIVRESVYVALGIAPNGERRVLGFWLLPTESALGWEGVLGELWQRGLRRVLLFITDGLPGLPEAIRRVYPQAEWQRCVVHGVRWSLSQVRARDRGLLAEDLRRVYGAESREEALGALEEVKAAWGSRYPGVVGLWVQDSGAFLRFYGYPKVLWPYLRSTNLMERFIREVRRGTKVRDHKFPKAEAVYKLLYLESERQEGRWAERKLKGFSEVKEVLEKMLQERYAPRTQTLTHNS
>NZ_AP019793.1|WP_143587366.1|53611_54943_-|CAP-domain-containing-protein
MVGESYQTVAPGETATYTLRLSFQEGAGPVTLRVALADPCAKGTSYCPGWDSTRYPGVEHPRETLTLTPSAPEVSLAFRVASDALPQGPFKYEVVLMGQDASGKTVEEVVPLYLKILNPGERSGMEAWNFWRSYLGLPPVREDPEWSFWAWLHSRYMAMNYPNDLPHDEDLSQPFASSWGQQAGRKGNEWGNLWRINGQPYWPPEESSINWWVAAPFHRFNMVDPGAVNGGFGIYKDVGPVPGYGDGYGRSWANLPNLYGGTASLPYLLFPAPDQELALERYDGGENPTPTAPCMNPDKPSKRPFLTQEGLTWDDGTGIVRTPIGLPLTLQTFPAFPVDTEVLEARLTRLSDGSLNPLCAYGSLQYWEGRDFWRERAVNILKSWGAIIALPHEPLTPGAEYEAYLKVRLGGEVREFTWRFRVASQENLGPLQVEPAHKFLEVR
>NZ_AP019793.1|WP_143587079.1|50454_52740_-|FdhF/YdeP-family-oxidoreductase
MAWLNPFWSSPKAYVRPPKRGLAPELWASRIPFTHLENFYEVFRALWENRDNLPYAWRILKDGVCDGCALGTSGLEDWTLHGVHLCNVRLRLLRLNTLPPLDPKVLEDVEALKGRKSRELRRLGRLPYPMLRRKGERGFRRVSWDEALGLAAEYLRHHLPEGAFFYLTSRGVPNETYYVVQKAVRALGCNHVDNAARICHSPSTVVLKEALGVAATTCSYTDLIGTDLVVFLGSNVANNQPVMMKYLYHAKKAGTKVAVVNPYREPGMERYFVPSDLESALFGTRIADRFFQILPGGDIAFLHGAAKWMLEEGWVDPGFIRAHTAGFEAYKALLEAIPFAELEKAAGVSREEMRAFAEMVGRAERAVFVWGMGITQHTHGEDNVRAIVNLALLKGFVGREGCGLMPIRGHSGVQGGAEMGAYATAFPGGLPVNPENARRLAELWGFPVPDRPGLTTPEALDRALEGKLGVLWAIGGDFREVMPDPEAVEEALRRVPLRVHQDIVLSSQMLLEPGECVLLLPATTRYEVPGGVTETSTERRVIFSPEIPGPRPPEARPEWEVFQELVHRLRPELKDRFRFASTAEIREEIARVIPLYEGIQRLKAKGDQFQYGGRRLCEGWRFPTPDGKAHFRPVPLPQKEVPEGAFRVVTRRGKQFNSIVHEDQDPLTGAFRDAVYMNPKDAARLGLKPGDPVVLENAFGRYAGRVYLAEVKEGTLEVHWPEGNVLVDPKARSPLAHIPAYKEILAHLRRGEAEAPSPLRP
>NZ_AP019793.1|WP_143587096.1|61059_62331_-|HAMP-domain-containing-protein
MSLRTRIALLTGLVAFLGLSLGLFLSSLLLSRLALAEVDHTLHLQAYTLLQEALSEPDHQVPPEEEADLLYGDFPAAAWVYRGERLVWRGGLASAPSLVRGLEAGRPTTVAGWRALALEREGLRAVVAQPLGVVEHLAALYLRLSLPLLLLVGLFSGGVAYLLLGAALRSLRRLADAASRFQPIPPLPGRDEVASLSQAFARLLATLKEERAREQAFLALASHELKTPIAAFRVNLERLLIQDRLDREALRRLKAQAERLEALAENLLALSRAGAQDLRLTEVNLFALVSEVFDRFQPLAVAQGRELLMEGDPVWMVADPRLLERALNNLVQNALLHGRGVVRLRVGREGEDVYLEVEDQGPGPAPRAEPGLGLRVARQVAEALGGKLLLRYGPPFRARLLFRLPSDGGPTVVPGAERSGGEA
>NZ_AP019793.1|WP_143587098.1|62327_62987_-|winged-helix-turn-helix-domain-containing-protein
MPSLLLLEDDASLGQVVAEALEHHGFRVLWAREEEEAWDLLMAQPVDVLVLDVRLPGGEEAGFLFARALREAGIQAPILFLTAKDALEDRLAGLEVGEDYLIKPFHFPELVARVRALLRRGEVRPMRVEAGEVVLEVEHRRVLRDGAPVALTAKEYQVLELLLLNRGRLFSKEEILERVWGPGYETESNLVEVYVKNLRKKLGDGLIETVRGLGYRVPG
>NZ_AP019793.1|WP_143587100.1|62987_63440_-|c-type-cytochrome
MRHKGWAYALAILGLGLSFAQTGQALYGQFCASCHQTNGQGLPKTFPPLAGHVQEILAQKDGRTYLMDVVLFGLQGAIQVKGQAYNGVMPAWGPQLKDDQIAAILNYLAQAFGNKPPKGFKPYTAAEVAKERAKKLTPDKVYALRKALKL
>NZ_AP019793.1|WP_143587102.1|63546_64470_+|hypothetical-protein
MGRFGLLGLLAWIGLLAWAKGPLGQGLVVADAGNHRLVELSGEGRLVRVVPLPSPFRYTDDVFLGPGGKVAYITDPEVDAVAAVAYPEGRLLWVYGTPGRPGKGPGQLDNPDDLVPLPSGLLALADIRNCRVLLLTREGKPFRVLGRTGVCSNAPGFFNKPNGAFPLGKDHLLVTEIVGRDVAIVDLQGHRLKTLPLPARYPSDANLTPWNTILVADWSDPGAVYELDLEGRLLWRYAPTDPEGRLDHPSVAVGLAHGLVALTDDRRHRVLVVDRRSNRVVFQYGKTGVPGSAPGLLRFPDGLDPMR
>NZ_AP019793.1|WP_143587104.1|64479_65604_+|polysaccharide-deacetylase-family-protein
MLGLLLALAPLPYVEGPGPSRPLPQEPLPALHLPLPEAVRAVYLGNGHLEAAHVVLQVPKDTPPSGLLRLAQQAAELAFQARPSLDEVDLSLYPSPYRGPGEFPLFTASVPRERVREFLGLETPSGYDRLWLNPGLAPKRPLEPLLEDRPYLEEPAPFQGRERALQLLQSRAGPRGGVLYHGSPAHPYAALTFDDAPHPLFAPLLLDTLRRLGLKATFFVIGRNAEAYPYFVRDLVAQGHELGNHTYHHVRLPGLPEEAVREEILRCSEVLEALTGAPPRYFRPPGGRYDRTVLRVARELGLTTVFWTDDPGDYKGLAPKALEARLQARLRPGGIVLLHDNLRTTLEVLPAFARAARGRGLALGPLSGLPLARR
>NZ_AP019793.1|WP_143587106.1|65678_67535_+|amino-acid-transporter
MADAGAESEERYPWWQVMCLTGLDYFSTLGYQPGIALLAAGWLSPLATLALVLFTLFGALPLYRRVAEESPHGEGSLGILARLIPGWRGKVLVLVVLGFMATDYTLTITLSAADAAVHLLQNPLVPPRFQGHQVALTLFLIAVLGFIFYLGFREAIGVAVAVTTSYLALNAVVLLAALARVDQGELSGYLRTLSQQYPEPAPLLLAVVLAFPQLALGLSGFETGVAVMPLVRGLPDDDPERPRGRIRNTQRLLTAAASLMGFFLLASSLATTLLIPPGLWTSEEVSGRAISYLAHRYLGEGVGSLYDLASILILWFAGASAMAGLLTLVPRYLPRFGMAPEWARRRRPLVLFFTAVAFAVTLAFRARVEAQAAAYATGVLVVMASAALALYLLERRARSGRARYFGGLGLVFAYVLAANVLERPDGVRIAAFFIATTLLASFVSRGLRALELRVERFLPDEEAERLIARLREGEAPVRLVAHRPEPPSLGAYMEKERRIRRLAHLPPGDPVYFVEVYVPDPSEFSAEARVWGVDHPQYKVFRILGSSAPNALAAFLLYLRDRTGKRPHIYFEWPEESPWHAALDFLLFGEGDVPALTREILRRAEPDPERRPLVHVGG
>NZ_AP019793.1|WP_143587108.1|67531_68458_-|AI-2E-family-transporter
MGREFLSLGLFLLGLWALSRLYPLLLWVFLAFTLAAALDPAVRALGRRLPYPSAVILAYLLVLGTVALGVFLAAPPLAAQFRRLVELLPQTVSWVEENLGLVRNDLTAPLAASVQAAGGLLTRAAEAASELTLALVLAVMISLEPDLVQRAAPYLPGKGWDRVLEDTWRRMGYWARAQFLVALSFAVLFGGWLLILGVPGPLALGAMGGVLEVVPFVGGLATASLAALLALSAKGPVTAFFVLAGYGAIALVEGKVLIPLIYGRTLGFHPALVLLAIFAFGKLFGFLGLFLAVPMAILAAGLLRHWRG
>NZ_AP019793.1|WP_143587110.1|68577_68778_+|hypothetical-protein
MLRRPWPALLGAGLALAQLGQAPDPAQHGFPQVVRVYRLGARHRTGWLSHPLAGAAVGWLIAVPAP
>NZ_AP019793.1|WP_143587370.1|70031_70853_+|ATP-dependent-Clp-protease-proteolytic-subunit
MLNGLFWLFLIFTFLSPYLQRQALEAARTRTLLALERRRKSRVITLIHRQEAINLLGIPVVRYIDVDDSEEVLRAIRLTDPQVPIDLILHTPGGLVLAAEQIALALLKHPAKVTVFVPHYAMSGGTLIALAADEIVMDENAVLGPIDPQIGEYPAASLLALVKTKPLEKIEDATLIKADIAAKAMKQVEAVAEKLLAEHMDPEKARTTAKLLSQGTWTHDYPITVEEARRLGLPVSTEMPREVYLLMELYPQAQMRRPSVQYIPMPYGKGGTP
>NZ_AP019793.1|WP_143587112.1|70947_72330_+|glucose-6-phosphate-dehydrogenase
MKLVILGFTGDLTRRLLVPALLRLLARGEVKDLEVLGLGAEDLGEEEILDRLEAFLKGLPGAELSAWPHLRWRTRYRQAGLTPEGLRRALQGLEGDAVFYLALPPALFAQAAEALGALGLAEEKTGFRRLVVEKPFGTDLASARALNAALHRHFREDQIYRMDHFLGKWATTNLLATRFANRFLEPVWRNCHVAWVEITYAETLGLEGRARYYDKAGALRDMLQNHLMQLFALMAMEPPARLSAESLRARKVEILRAVRPIPEGAKGFAARGQYQGYRDEEGIPKTSRTETYAALKLFVDDWRFQGVPFYLRSGKRLTEDVGYVALALRPAPSGCFGEAEPGYLVFWLKPGVGLYLTLYGQSLEKGGLEPHVLRYRPGREPEASAYEELLLDVIRGNLSHFPSEEEVEAAWAIVDPVLKTWQEGEPEVYPRGTDGPRSAEEILEPGHRWLDLGRMARGWR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4217-4249	0	1.0
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29279-29311	0	1.0
NZ_AP019793_1	1.2\|29341\|31\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29341-29371	31	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4279-4309	0	1.0
NZ_AP019793_1	1.2\|29341\|31\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29341-29371	31	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29341-29371	0	1.0
NZ_AP019793_1	1.3\|29401\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29401-29432	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4339-4370	0	1.0
NZ_AP019793_1	1.3\|29401\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29401-29432	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29401-29432	0	1.0
NZ_AP019793_1	1.4\|29462\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29462-29494	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4400-4432	0	1.0
NZ_AP019793_1	1.4\|29462\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29462-29494	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29462-29494	0	1.0
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4462-4493	0	1.0
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29524-29555	0	1.0
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4523-4554	0	1.0
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29585-29616	0	1.0
NZ_AP019793_1	1.7\|29646\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29646-29677	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4584-4615	0	1.0
NZ_AP019793_1	1.7\|29646\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29646-29677	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29646-29677	0	1.0
NZ_AP019793_1	1.8\|29707\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29707-29739	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4645-4677	0	1.0
NZ_AP019793_1	1.8\|29707\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29707-29739	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29707-29739	0	1.0
NZ_AP019793_1	1.9\|29769\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29769-29801	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4707-4739	0	1.0
NZ_AP019793_1	1.9\|29769\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29769-29801	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29769-29801	0	1.0
NZ_AP019793_1	1.10\|29831\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29831-29862	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4769-4800	0	1.0
NZ_AP019793_1	1.10\|29831\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29831-29862	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29831-29862	0	1.0
NZ_AP019793_1	1.11\|29892\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29892-29923	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4830-4861	0	1.0
NZ_AP019793_1	1.11\|29892\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29892-29923	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29892-29923	0	1.0
NZ_AP019793_1	1.11\|29892\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29892-29923	32	NC_004462	Thermus thermophilus phage IN93, complete genome	8630-8661	0	1.0
NZ_AP019793_1	1.11\|29892\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29892-29923	32	AB063393	Thermus thermophilus phage IN93 DNA, complete genome	8630-8661	0	1.0
NZ_AP019793_1	1.12\|29953\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29953-29984	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29953-29984	0	1.0
NZ_AP019793_1	1.12\|29953\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29953-29984	32	NC_004462	Thermus thermophilus phage IN93, complete genome	15590-15621	0	1.0
NZ_AP019793_1	1.12\|29953\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29953-29984	32	AB063393	Thermus thermophilus phage IN93 DNA, complete genome	15590-15621	0	1.0
NZ_AP019793_1	1.13\|30014\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30014-30046	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4891-4923	0	1.0
NZ_AP019793_1	1.13\|30014\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30014-30046	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30014-30046	0	1.0
NZ_AP019793_1	1.14\|30076\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30076-30108	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4953-4985	0	1.0
NZ_AP019793_1	1.14\|30076\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30076-30108	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30076-30108	0	1.0
NZ_AP019793_1	1.15\|30138\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30138-30170	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	5015-5047	0	1.0
NZ_AP019793_1	1.15\|30138\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30138-30170	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30138-30170	0	1.0
NZ_AP019793_1	1.16\|30200\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30200-30231	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	5077-5108	0	1.0
NZ_AP019793_1	1.16\|30200\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30200-30231	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30200-30231	0	1.0
NZ_AP019793_1	1.17\|30261\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30261-30292	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	5138-5169	0	1.0
NZ_AP019793_1	1.17\|30261\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30261-30292	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30261-30292	0	1.0
NZ_AP019793_1	1.18\|30322\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30322-30354	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	5199-5231	0	1.0
NZ_AP019793_1	1.18\|30322\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30322-30354	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30322-30354	0	1.0
NZ_AP019793_1	1.19\|30384\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30384-30416	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	5261-5293	0	1.0
NZ_AP019793_1	1.19\|30384\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30384-30416	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30384-30416	0	1.0
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	5323-5354	0	1.0
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30446-30477	0	1.0
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	NC_004462	Thermus thermophilus phage IN93, complete genome	9687-9718	0	1.0
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	AB063393	Thermus thermophilus phage IN93 DNA, complete genome	9687-9718	0	1.0
NZ_AP019793_1	1.21\|30507\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30507-30538	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	5384-5415	0	1.0
NZ_AP019793_1	1.21\|30507\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30507-30538	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30507-30538	0	1.0
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	5445-5476	0	1.0
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30568-30599	0	1.0
NZ_AP019793_1	1.23\|30629\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30629-30660	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	5506-5537	0	1.0
NZ_AP019793_1	1.23\|30629\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30629-30660	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30629-30660	0	1.0
NZ_AP019793_1	1.24\|30690\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30690-30722	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	5567-5599	0	1.0
NZ_AP019793_1	1.24\|30690\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30690-30722	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30690-30722	0	1.0
NZ_AP019793_1	1.25\|30752\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30752-30784	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	5629-5661	0	1.0
NZ_AP019793_1	1.25\|30752\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30752-30784	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30752-30784	0	1.0
NZ_AP019793_1	1.26\|30814\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30814-30845	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	5691-5722	0	1.0
NZ_AP019793_1	1.26\|30814\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30814-30845	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30814-30845	0	1.0
NZ_AP019793_1	1.27\|30875\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30875-30907	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	30875-30907	0	1.0
NZ_AP019793_2	2.1\|40713\|34\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40713-40746	34	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	40713-40746	0	1.0
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	15589-15620	0	1.0
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	40776-40807	0	1.0
NZ_AP019793_2	2.3\|40837\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40837-40869	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	15650-15682	0	1.0
NZ_AP019793_2	2.3\|40837\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40837-40869	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	40837-40869	0	1.0
NZ_AP019793_2	2.4\|40899\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40899-40931	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	15712-15744	0	1.0
NZ_AP019793_2	2.4\|40899\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40899-40931	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	40899-40931	0	1.0
NZ_AP019793_2	2.5\|40961\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40961-40992	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	15774-15805	0	1.0
NZ_AP019793_2	2.5\|40961\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40961-40992	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	40961-40992	0	1.0
NZ_AP019793_2	2.6\|41022\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41022-41054	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	15835-15867	0	1.0
NZ_AP019793_2	2.6\|41022\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41022-41054	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	41022-41054	0	1.0
NZ_AP019793_2	2.7\|41084\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41084-41116	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	15897-15929	0	1.0
NZ_AP019793_2	2.7\|41084\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41084-41116	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	41084-41116	0	1.0
NZ_AP019793_2	2.8\|41146\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41146-41178	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	15959-15991	0	1.0
NZ_AP019793_2	2.8\|41146\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41146-41178	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	41146-41178	0	1.0
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	16021-16052	0	1.0
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	41208-41239	0	1.0
NZ_AP019793_2	2.10\|41269\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41269-41300	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	16082-16113	0	1.0
NZ_AP019793_2	2.10\|41269\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41269-41300	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	41269-41300	0	1.0
NZ_AP019793_2	2.11\|41330\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41330-41361	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	16143-16174	0	1.0
NZ_AP019793_2	2.11\|41330\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41330-41361	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	41330-41361	0	1.0
NZ_AP019793_2	2.12\|41391\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41391-41422	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	16204-16235	0	1.0
NZ_AP019793_2	2.12\|41391\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41391-41422	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	41391-41422	0	1.0
NZ_AP019793_2	2.13\|41452\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41452-41484	33	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	16265-16297	0	1.0
NZ_AP019793_2	2.13\|41452\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41452-41484	33	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	41452-41484	0	1.0
NZ_AP019793_2	2.14\|41514\|32\|NZ_AP019793\|CRISPRCasFinder,CRT	41514-41545	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	16327-16358	0	1.0
NZ_AP019793_2	2.14\|41514\|32\|NZ_AP019793\|CRISPRCasFinder,CRT	41514-41545	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	41514-41545	0	1.0
NZ_AP019793_2	2.15\|41575\|32\|NZ_AP019793\|CRISPRCasFinder,CRT	41575-41606	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	16388-16419	0	1.0
NZ_AP019793_2	2.15\|41575\|32\|NZ_AP019793\|CRISPRCasFinder,CRT	41575-41606	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	41575-41606	0	1.0
NZ_AP019793_2	2.16\|41636\|32\|NZ_AP019793\|CRISPRCasFinder,CRT	41636-41667	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	16449-16480	0	1.0
NZ_AP019793_2	2.16\|41636\|32\|NZ_AP019793\|CRISPRCasFinder,CRT	41636-41667	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	41636-41667	0	1.0
NZ_AP019793_3	3.1\|59993\|39\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	59993-60031	39	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	34806-34844	0	1.0
NZ_AP019793_3	3.1\|59993\|39\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	59993-60031	39	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	59993-60031	0	1.0
NZ_AP019793_3	3.2\|60068\|38\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	60068-60105	38	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	34881-34918	0	1.0
NZ_AP019793_3	3.2\|60068\|38\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	60068-60105	38	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	60068-60105	0	1.0
NZ_AP019793_3	3.3\|60142\|43\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	60142-60184	43	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	34955-34997	0	1.0
NZ_AP019793_3	3.3\|60142\|43\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	60142-60184	43	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	60142-60184	0	1.0
NZ_AP019793_3	3.4\|60221\|41\|NZ_AP019793\|CRISPRCasFinder,CRT	60221-60261	41	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	35034-35074	0	1.0
NZ_AP019793_3	3.4\|60221\|41\|NZ_AP019793\|CRISPRCasFinder,CRT	60221-60261	41	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	60221-60261	0	1.0
NZ_AP019793_1	1.7\|29646\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29646-29677	32	MK071653	Meiothermus phage MMP7, complete genome	13829-13860	1	0.969
NZ_AP019793_1	1.7\|29646\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29646-29677	32	MH939157	UNVERIFIED: Meiothermus phage MMP17, complete genome	5065-5096	1	0.969
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	4525-4556	2	0.938
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	29587-29618	2	0.938
NZ_AP019793_2	2.13\|41452\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41452-41484	33	NC_010878	Thermus sp. 4C plasmid pL4C, complete sequence	541-573	2	0.939
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	NZ_AP019802	Thermus thermophilus strain HC11 plasmid pHC11, complete sequence	104125-104156	5	0.844
NZ_AP019793_1	1.2\|29341\|31\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29341-29371	31	NC_004808	Streptomyces rochei plasmid pSLA2-L DNA, complete sequence	155680-155710	6	0.806
NZ_AP019793_1	1.2\|29341\|31\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29341-29371	31	MN703407	Microbacterium phage Leaf, complete genome	3285-3315	6	0.806
NZ_AP019793_1	1.2\|29341\|31\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29341-29371	31	MN703414	Microbacterium phage Dewdrop, complete genome	3285-3315	6	0.806
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_AP018921	Pseudonocardia autotrophica strain NBRC 12743 plasmid pPA12743CP, complete sequence	176809-176840	6	0.812
NZ_AP019793_1	1.7\|29646\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29646-29677	32	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	11818-11849	6	0.812
NZ_AP019793_1	1.12\|29953\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29953-29984	32	DQ115846	Cyanobacteria phage AS-1 contig_39 genomic sequence	417-448	6	0.812
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	172537-172568	6	0.812
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	201951-201982	6	0.812
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	NZ_CP023065	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence	227708-227739	6	0.812
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	617660-617691	6	0.812
NZ_AP019793_1	1.2\|29341\|31\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29341-29371	31	NC_009956	Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI02, complete sequence	59448-59478	7	0.774
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	448797-448828	7	0.781
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	169202-169233	7	0.781
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_AP013104	Bradyrhizobium elkanii USDA 61 plasmid pBel61, complete sequence	97504-97535	7	0.781
NZ_AP019793_1	1.12\|29953\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29953-29984	32	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	84455-84486	7	0.781
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	NC_014811	Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence	57760-57791	7	0.781
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	197906-197937	7	0.781
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	349299-349330	7	0.781
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	195694-195725	7	0.781
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	392808-392839	7	0.781
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	532506-532537	7	0.781
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	MG757166	Gordonia phage SuperSulley, complete genome	19392-19423	7	0.781
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	MF919510	Gordonia phage Kabluna, complete genome	18307-18338	7	0.781
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	MK376962	Gordonia phage NosilaM, complete genome	19204-19235	7	0.781
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	MH779499	Gordonia phage Buggaboo, complete genome	19392-19423	7	0.781
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	185243-185274	7	0.781
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NZ_CP041206	Rhizobium sp. NIBRBAC000502774 plasmid pMK-3, complete sequence	273797-273828	7	0.781
NZ_AP019793_2	2.3\|40837\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40837-40869	33	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	641662-641694	7	0.788
NZ_AP019793_2	2.3\|40837\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40837-40869	33	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	135753-135785	7	0.788
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	169831-169862	7	0.781
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	199245-199276	7	0.781
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NC_005838	Thermus thermophilus HB27 plasmid pTT27, complete sequence	18231-18262	7	0.781
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_CP029776	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed2, complete sequence	68309-68340	7	0.781
NZ_AP019793_2	2.15\|41575\|32\|NZ_AP019793\|CRISPRCasFinder,CRT	41575-41606	32	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	393278-393309	7	0.781
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP035421	Leisingera sp. NJS204 plasmid unnamed4, complete sequence	13471-13502	8	0.75
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP038238	Leisingera sp. NJS201 plasmid unnamed4, complete sequence	100401-100432	8	0.75
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	687570-687601	8	0.75
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP046574	Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence	51425-51456	8	0.75
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	350191-350222	8	0.75
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP049162	Pseudomonas aeruginosa strain MS14403 plasmid pMS14403A, complete sequence	41451-41482	8	0.75
NZ_AP019793_1	1.12\|29953\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29953-29984	32	NC_042132	Gordonia phage Sour, complete genome	38210-38241	8	0.75
NZ_AP019793_1	1.17\|30261\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30261-30292	32	MF403007	Agrobacterium phage Atu_ph04, complete genome	9275-9306	8	0.75
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NC_010335	Caulobacter sp. K31 plasmid pCAUL01, complete sequence	2564-2595	8	0.75
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NZ_AP017657	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_3, complete sequence	26814-26845	8	0.75
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NZ_CP026974	Achromobacter insolitus strain FDAARGOS_88 plasmid unnamed1, complete sequence	183041-183072	8	0.75
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	MK620897	Microbacterium phage Rhysand, complete genome	592-623	8	0.75
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	MT316459	Microbacterium phage Otwor, complete genome	592-623	8	0.75
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	MH509441	Mycobacterium phage Acolyte, complete genome	33337-33368	8	0.75
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	MT316462	Microbacterium phage Danno, complete genome	592-623	8	0.75
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	MN329679	Microbacterium phage Vanisius, complete genome	592-623	8	0.75
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	MK894434	Microbacterium phage LaviMo, complete genome	592-623	8	0.75
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	MN369745	Microbacterium phage Kaijohn, complete genome	703-734	8	0.75
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	MH576963	Microbacterium phage Scamander, complete genome	592-623	8	0.75
NZ_AP019793_1	1.26\|30814\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30814-30845	32	NC_017791	Deinococcus gobiensis I-0 plasmid P2, complete sequence	327115-327146	8	0.75
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NC_008270	Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence	381032-381063	8	0.75
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NZ_CP009154	Burkholderia pseudomallei strain TSV202 plasmid 2, complete sequence	23812-23843	8	0.75
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NZ_CP017943	Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence	584481-584512	8	0.75
NZ_AP019793_2	2.5\|40961\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40961-40992	32	NC_023286	Streptomyces sp. F12 plasmid pFRL6, complete sequence	143849-143880	8	0.75
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_KU130294	Pseudomonas putida strain 12969 plasmid p12969-DIM, complete sequence	405041-405072	8	0.75
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_CP039989	Pseudomonas aeruginosa strain T2436 plasmid pBT2436, complete sequence	418750-418781	8	0.75
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_CP053709	Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence	196395-196426	8	0.75
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NC_019387	Thermus oshimai JL-2 plasmid pTHEOS01, complete sequence	151983-152014	8	0.75
NZ_AP019793_2	2.15\|41575\|32\|NZ_AP019793\|CRISPRCasFinder,CRT	41575-41606	32	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	89565-89596	8	0.75
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	28205-28237	9	0.727
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NZ_CP021813	Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence	144172-144204	9	0.727
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	1268058-1268090	9	0.727
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	1396999-1397031	9	0.727
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	1353785-1353817	9	0.727
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	520535-520567	9	0.727
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	539468-539500	9	0.727
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	461508-461540	9	0.727
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	417441-417473	9	0.727
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	951725-951757	9	0.727
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	919117-919149	9	0.727
NZ_AP019793_1	1.1\|29279\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29279-29311	33	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	105452-105484	9	0.727
NZ_AP019793_1	1.2\|29341\|31\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29341-29371	31	CP042595	Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence	324938-324968	9	0.71
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	800644-800675	9	0.719
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	205030-205061	9	0.719
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	215524-215555	9	0.719
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	728785-728816	9	0.719
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	3948-3979	9	0.719
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	459586-459617	9	0.719
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	206358-206389	9	0.719
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	187313-187344	9	0.719
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	KU998244	Gordonia phage Smoothie, complete genome	44374-44405	9	0.719
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	MF919520	Gordonia phage Lozinak, complete genome	44374-44405	9	0.719
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NC_030901	Gordonia phage ClubL, complete genome	44065-44096	9	0.719
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	411298-411329	9	0.719
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	CP036421	Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence	90950-90981	9	0.719
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP013071	Sphingobium indicum B90A plasmid pSRL1, complete sequence	63225-63256	9	0.719
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	197741-197772	9	0.719
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NC_016652	Rhodococcus phage REQ2, complete genome	25043-25074	9	0.719
NZ_AP019793_1	1.9\|29769\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29769-29801	33	KX752698	Mycobacterium phage Tonenili, complete genome	41130-41162	9	0.727
NZ_AP019793_1	1.10\|29831\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29831-29862	32	NZ_CP046723	Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence	345217-345248	9	0.719
NZ_AP019793_1	1.10\|29831\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29831-29862	32	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	266422-266453	9	0.719
NZ_AP019793_1	1.10\|29831\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29831-29862	32	NZ_CP045721	Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence	479856-479887	9	0.719
NZ_AP019793_1	1.10\|29831\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29831-29862	32	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	518660-518691	9	0.719
NZ_AP019793_1	1.10\|29831\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29831-29862	32	NZ_CP034149	Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence	318505-318536	9	0.719
NZ_AP019793_1	1.10\|29831\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29831-29862	32	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	288086-288117	9	0.719
NZ_AP019793_1	1.10\|29831\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29831-29862	32	NZ_CP031650	Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence	175795-175826	9	0.719
NZ_AP019793_1	1.10\|29831\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29831-29862	32	NZ_CP038854	Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence	201148-201179	9	0.719
NZ_AP019793_1	1.11\|29892\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29892-29923	32	CP053577	Salmonella enterica strain 2012K-0845 plasmid unnamed2, complete sequence	30628-30659	9	0.719
NZ_AP019793_1	1.12\|29953\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29953-29984	32	NC_010408	Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1, complete sequence	35085-35116	9	0.719
NZ_AP019793_1	1.12\|29953\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29953-29984	32	NZ_LR134450	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence	220122-220153	9	0.719
NZ_AP019793_1	1.14\|30076\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30076-30108	33	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	188220-188252	9	0.727
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	NZ_CP049751	Rhodococcus fascians A21d2 plasmid unnamed2, complete sequence	1232-1263	9	0.719
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1179751-1179782	9	0.719
NZ_AP019793_1	1.21\|30507\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30507-30538	32	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	177589-177620	9	0.719
NZ_AP019793_1	1.21\|30507\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30507-30538	32	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	177589-177620	9	0.719
NZ_AP019793_1	1.21\|30507\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30507-30538	32	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	538908-538939	9	0.719
NZ_AP019793_1	1.21\|30507\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30507-30538	32	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	63457-63488	9	0.719
NZ_AP019793_1	1.21\|30507\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30507-30538	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2227232-2227263	9	0.719
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NZ_CP013109	Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence	306180-306211	9	0.719
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NC_008738	Marinobacter hydrocarbonoclasticus VT8 plasmid pMAQU01, complete sequence	204077-204108	9	0.719
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	80723-80754	9	0.719
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	MN693916	Marine virus AFVG_250M613, complete genome	33493-33524	9	0.719
NZ_AP019793_2	2.3\|40837\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40837-40869	33	MT740732	Ralstonia phage Darius, complete genome	18873-18905	9	0.727
NZ_AP019793_2	2.3\|40837\|33\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40837-40869	33	MT740740	Ralstonia phage Gervaise, complete genome	30507-30539	9	0.727
NZ_AP019793_2	2.5\|40961\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40961-40992	32	NZ_CP019438	Thioclava nitratireducens strain 25B10_4 plasmid unnamed1, complete sequence	34294-34325	9	0.719
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NC_006462	Thermus thermophilus HB8 plasmid pTT27, complete sequence	14100-14131	9	0.719
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NC_017588	Thermus thermophilus JL-18 plasmid pTTJL1801, complete sequence	139153-139184	9	0.719
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_LR027520	Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence	270943-270974	9	0.719
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5172692-5172723	9	0.719
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_AP019802	Thermus thermophilus strain HC11 plasmid pHC11, complete sequence	7262-7293	9	0.719
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	243786-243817	9	0.719
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	NZ_CP023976	Streptomyces alboflavus strain MDJK44 plasmid pMDJK44.1, complete sequence	61823-61854	9	0.719
NZ_AP019793_2	2.9\|41208\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41208-41239	32	CP042595	Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence	51308-51339	9	0.719
NZ_AP019793_2	2.11\|41330\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41330-41361	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	802324-802355	9	0.719
NZ_AP019793_2	2.11\|41330\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41330-41361	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	469674-469705	9	0.719
NZ_AP019793_2	2.11\|41330\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41330-41361	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1634636-1634667	9	0.719
NZ_AP019793_2	2.11\|41330\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41330-41361	32	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	420497-420528	9	0.719
NZ_AP019793_2	2.11\|41330\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41330-41361	32	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	540937-540968	9	0.719
NZ_AP019793_2	2.11\|41330\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41330-41361	32	NC_013857	Azospirillum sp. B510 plasmid pAB510c, complete sequence	606804-606835	9	0.719
NZ_AP019793_2	2.11\|41330\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41330-41361	32	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	965848-965879	9	0.719
NZ_AP019793_2	2.11\|41330\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41330-41361	32	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	173775-173806	9	0.719
NZ_AP019793_2	2.11\|41330\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41330-41361	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	810359-810390	9	0.719
NZ_AP019793_2	2.11\|41330\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	41330-41361	32	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1166527-1166558	9	0.719
NZ_AP019793_2	2.15\|41575\|32\|NZ_AP019793\|CRISPRCasFinder,CRT	41575-41606	32	NC_010627	Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence	179750-179781	9	0.719
NZ_AP019793_2	2.16\|41636\|32\|NZ_AP019793\|CRISPRCasFinder,CRT	41636-41667	32	NC_009339	Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence	149039-149070	9	0.719
NZ_AP019793_2	2.16\|41636\|32\|NZ_AP019793\|CRISPRCasFinder,CRT	41636-41667	32	NC_008703	Mycobacterium sp. KMS plasmid pMKMS01, complete sequence	107312-107343	9	0.719
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	210793-210824	10	0.688
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP053440	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence	216347-216378	10	0.688
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP048281	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence	248579-248610	10	0.688
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	79141-79172	10	0.688
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	920034-920065	10	0.688
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	1097991-1098022	10	0.688
NZ_AP019793_1	1.5\|29524\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29524-29555	32	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	517170-517201	10	0.688
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	CP036421	Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence	90948-90979	10	0.688
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP044425	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence	24446-24477	10	0.688
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	70440-70471	10	0.688
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NC_016588	Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence	105030-105061	10	0.688
NZ_AP019793_1	1.7\|29646\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29646-29677	32	NC_012527	Deinococcus deserti VCD115 plasmid 1, complete sequence	109956-109987	10	0.688
NZ_AP019793_1	1.10\|29831\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29831-29862	32	NZ_CP022517	Pantoea vagans strain FBS135 plasmid pPant1, complete sequence	454084-454115	10	0.688
NZ_AP019793_1	1.11\|29892\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29892-29923	32	NZ_CP017078	Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence	209741-209772	10	0.688
NZ_AP019793_1	1.11\|29892\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29892-29923	32	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	420780-420811	10	0.688
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	722660-722691	10	0.688
NZ_AP019793_1	1.21\|30507\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30507-30538	32	NC_008242	Chelativorans sp. BNC1 plasmid 1, complete sequence	154536-154567	10	0.688
NZ_AP019793_1	1.22\|30568\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30568-30599	32	NC_015951	Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete sequence	243678-243709	10	0.688
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1548555-1548586	10	0.688
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NZ_CP013052	Sinorhizobium americanum CCGM7 plasmid A, complete sequence	176237-176268	10	0.688
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NZ_CP032687	Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence	53984-54015	10	0.688
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NZ_CP032692	Rhizobium sp. CCGE532 plasmid pRCCGE532b, complete sequence	48933-48964	10	0.688
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NC_020061	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence	48445-48476	10	0.688
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	192253-192284	11	0.656
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	192253-192284	11	0.656
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	48793-48824	11	0.656
NZ_AP019793_1	1.6\|29585\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	29585-29616	32	NZ_CP035506	Haematobacter massiliensis strain OT1 plasmid pOT1-6, complete sequence	89204-89235	11	0.656
NZ_AP019793_1	1.20\|30446\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	30446-30477	32	NC_018022	Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence	257814-257845	11	0.656
NZ_AP019793_2	2.2\|40776\|32\|NZ_AP019793\|PILER-CR,CRISPRCasFinder,CRT	40776-40807	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	232079-232110	11	0.656

1. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgaacgggttcacgccgtcctgggtgaagag	Protospacer
*********************************

2. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgaacgggttcacgccgtcctgggtgaagag	Protospacer
*********************************

3. spacer 1.2|29341|31|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gcttgcgggactcctccacggtctcggcgct	CRISPR spacer
gcttgcgggactcctccacggtctcggcgct	Protospacer
*******************************

4. spacer 1.2|29341|31|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gcttgcgggactcctccacggtctcggcgct	CRISPR spacer
gcttgcgggactcctccacggtctcggcgct	Protospacer
*******************************

5. spacer 1.3|29401|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

tacctcttcccctactggagggccaagggcgc	CRISPR spacer
tacctcttcccctactggagggccaagggcgc	Protospacer
********************************

6. spacer 1.3|29401|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

tacctcttcccctactggagggccaagggcgc	CRISPR spacer
tacctcttcccctactggagggccaagggcgc	Protospacer
********************************

7. spacer 1.4|29462|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

ggccggggcagaggccaaggagtgaataacctt	CRISPR spacer
ggccggggcagaggccaaggagtgaataacctt	Protospacer
*********************************

8. spacer 1.4|29462|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

ggccggggcagaggccaaggagtgaataacctt	CRISPR spacer
ggccggggcagaggccaaggagtgaataacctt	Protospacer
*********************************

9. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
ttgttttccacggccttgcggatgacctccat	Protospacer
********************************

10. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
ttgttttccacggccttgcggatgacctccat	Protospacer
********************************

11. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
gtccccggcggcggggatccccgccgccaggt	Protospacer
********************************

12. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
gtccccggcggcggggatccccgccgccaggt	Protospacer
********************************

13. spacer 1.7|29646|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

ggtcgtctggtctgcgggcccgctggaggttg	CRISPR spacer
ggtcgtctggtctgcgggcccgctggaggttg	Protospacer
********************************

14. spacer 1.7|29646|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

ggtcgtctggtctgcgggcccgctggaggttg	CRISPR spacer
ggtcgtctggtctgcgggcccgctggaggttg	Protospacer
********************************

15. spacer 1.8|29707|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gaagatgttgctccttcagatcggtccctacag	CRISPR spacer
gaagatgttgctccttcagatcggtccctacag	Protospacer
*********************************

16. spacer 1.8|29707|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gaagatgttgctccttcagatcggtccctacag	CRISPR spacer
gaagatgttgctccttcagatcggtccctacag	Protospacer
*********************************

17. spacer 1.9|29769|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gcccttgggccactcggggcgctccgcgtggac	CRISPR spacer
gcccttgggccactcggggcgctccgcgtggac	Protospacer
*********************************

18. spacer 1.9|29769|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gcccttgggccactcggggcgctccgcgtggac	CRISPR spacer
gcccttgggccactcggggcgctccgcgtggac	Protospacer
*********************************

19. spacer 1.10|29831|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

atgatctcgttggtggagctgcggacgagccc	CRISPR spacer
atgatctcgttggtggagctgcggacgagccc	Protospacer
********************************

20. spacer 1.10|29831|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

atgatctcgttggtggagctgcggacgagccc	CRISPR spacer
atgatctcgttggtggagctgcggacgagccc	Protospacer
********************************

21. spacer 1.11|29892|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gtgaaggggcaggggccccggccgggaaatct	CRISPR spacer
gtgaaggggcaggggccccggccgggaaatct	Protospacer
********************************

22. spacer 1.11|29892|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gtgaaggggcaggggccccggccgggaaatct	CRISPR spacer
gtgaaggggcaggggccccggccgggaaatct	Protospacer
********************************

23. spacer 1.11|29892|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_004462 (Thermus thermophilus phage IN93, complete genome) position: , mismatch: 0, identity: 1.0

gtgaaggggcaggggccccggccgggaaatct	CRISPR spacer
gtgaaggggcaggggccccggccgggaaatct	Protospacer
********************************

24. spacer 1.11|29892|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to AB063393 (Thermus thermophilus phage IN93 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gtgaaggggcaggggccccggccgggaaatct	CRISPR spacer
gtgaaggggcaggggccccggccgggaaatct	Protospacer
********************************

25. spacer 1.12|29953|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

ccgagggtcacgaagccggcccagcggccatc	CRISPR spacer
ccgagggtcacgaagccggcccagcggccatc	Protospacer
********************************

26. spacer 1.12|29953|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_004462 (Thermus thermophilus phage IN93, complete genome) position: , mismatch: 0, identity: 1.0

ccgagggtcacgaagccggcccagcggccatc	CRISPR spacer
ccgagggtcacgaagccggcccagcggccatc	Protospacer
********************************

27. spacer 1.12|29953|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to AB063393 (Thermus thermophilus phage IN93 DNA, complete genome) position: , mismatch: 0, identity: 1.0

ccgagggtcacgaagccggcccagcggccatc	CRISPR spacer
ccgagggtcacgaagccggcccagcggccatc	Protospacer
********************************

28. spacer 1.13|30014|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gatggctggtatggacctatcggccagattgag	CRISPR spacer
gatggctggtatggacctatcggccagattgag	Protospacer
*********************************

29. spacer 1.13|30014|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gatggctggtatggacctatcggccagattgag	CRISPR spacer
gatggctggtatggacctatcggccagattgag	Protospacer
*********************************

30. spacer 1.14|30076|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gtggcggttcttttgacggcggcgttggctcaa	CRISPR spacer
gtggcggttcttttgacggcggcgttggctcaa	Protospacer
*********************************

31. spacer 1.14|30076|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gtggcggttcttttgacggcggcgttggctcaa	CRISPR spacer
gtggcggttcttttgacggcggcgttggctcaa	Protospacer
*********************************

32. spacer 1.15|30138|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gatggtgtgccggaggaggttcctccagtccac	CRISPR spacer
gatggtgtgccggaggaggttcctccagtccac	Protospacer
*********************************

33. spacer 1.15|30138|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gatggtgtgccggaggaggttcctccagtccac	CRISPR spacer
gatggtgtgccggaggaggttcctccagtccac	Protospacer
*********************************

34. spacer 1.16|30200|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

ggcctcctctttatcgccacggggacgctggt	CRISPR spacer
ggcctcctctttatcgccacggggacgctggt	Protospacer
********************************

35. spacer 1.16|30200|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

ggcctcctctttatcgccacggggacgctggt	CRISPR spacer
ggcctcctctttatcgccacggggacgctggt	Protospacer
********************************

36. spacer 1.17|30261|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

ccttccctttctcgtagaaggcgccttcccct	CRISPR spacer
ccttccctttctcgtagaaggcgccttcccct	Protospacer
********************************

37. spacer 1.17|30261|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

ccttccctttctcgtagaaggcgccttcccct	CRISPR spacer
ccttccctttctcgtagaaggcgccttcccct	Protospacer
********************************

38. spacer 1.18|30322|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

ttgggcctcgaggatggcctccggggtcaagaa	CRISPR spacer
ttgggcctcgaggatggcctccggggtcaagaa	Protospacer
*********************************

39. spacer 1.18|30322|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

ttgggcctcgaggatggcctccggggtcaagaa	CRISPR spacer
ttgggcctcgaggatggcctccggggtcaagaa	Protospacer
*********************************

40. spacer 1.19|30384|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

ctgggtggcgatgaccccactctccacgtcccc	CRISPR spacer
ctgggtggcgatgaccccactctccacgtcccc	Protospacer
*********************************

41. spacer 1.19|30384|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

ctgggtggcgatgaccccactctccacgtcccc	CRISPR spacer
ctgggtggcgatgaccccactctccacgtcccc	Protospacer
*********************************

42. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gtggtggggcccgtcctcgcggcggccatccg	CRISPR spacer
gtggtggggcccgtcctcgcggcggccatccg	Protospacer
********************************

43. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gtggtggggcccgtcctcgcggcggccatccg	CRISPR spacer
gtggtggggcccgtcctcgcggcggccatccg	Protospacer
********************************

44. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_004462 (Thermus thermophilus phage IN93, complete genome) position: , mismatch: 0, identity: 1.0

gtggtggggcccgtcctcgcggcggccatccg	CRISPR spacer
gtggtggggcccgtcctcgcggcggccatccg	Protospacer
********************************

45. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to AB063393 (Thermus thermophilus phage IN93 DNA, complete genome) position: , mismatch: 0, identity: 1.0

gtggtggggcccgtcctcgcggcggccatccg	CRISPR spacer
gtggtggggcccgtcctcgcggcggccatccg	Protospacer
********************************

46. spacer 1.21|30507|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

ccaatcgcctggaccgccgccgcgtagcgtcc	CRISPR spacer
ccaatcgcctggaccgccgccgcgtagcgtcc	Protospacer
********************************

47. spacer 1.21|30507|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

ccaatcgcctggaccgccgccgcgtagcgtcc	CRISPR spacer
ccaatcgcctggaccgccgccgcgtagcgtcc	Protospacer
********************************

48. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
cgcggggatctggtccagcgcctggaacgggt	Protospacer
********************************

49. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
cgcggggatctggtccagcgcctggaacgggt	Protospacer
********************************

50. spacer 1.23|30629|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

tgagaggcgaacgctgccgggaatgtccatat	CRISPR spacer
tgagaggcgaacgctgccgggaatgtccatat	Protospacer
********************************

51. spacer 1.23|30629|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

tgagaggcgaacgctgccgggaatgtccatat	CRISPR spacer
tgagaggcgaacgctgccgggaatgtccatat	Protospacer
********************************

52. spacer 1.24|30690|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gccaagacagccaacctacgcatcttccatctc	CRISPR spacer
gccaagacagccaacctacgcatcttccatctc	Protospacer
*********************************

53. spacer 1.24|30690|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gccaagacagccaacctacgcatcttccatctc	CRISPR spacer
gccaagacagccaacctacgcatcttccatctc	Protospacer
*********************************

54. spacer 1.25|30752|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

acttttccccctctgtggtgaagaactgcctga	CRISPR spacer
acttttccccctctgtggtgaagaactgcctga	Protospacer
*********************************

55. spacer 1.25|30752|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

acttttccccctctgtggtgaagaactgcctga	CRISPR spacer
acttttccccctctgtggtgaagaactgcctga	Protospacer
*********************************

56. spacer 1.26|30814|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

tcctgggcccactgtggaggctgaggaaaccc	CRISPR spacer
tcctgggcccactgtggaggctgaggaaaccc	Protospacer
********************************

57. spacer 1.26|30814|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

tcctgggcccactgtggaggctgaggaaaccc	CRISPR spacer
tcctgggcccactgtggaggctgaggaaaccc	Protospacer
********************************

58. spacer 1.27|30875|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

agcgtcagcgtgagtatcgccagacggcacatt	CRISPR spacer
agcgtcagcgtgagtatcgccagacggcacatt	Protospacer
*********************************

59. spacer 2.1|40713|34|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gatatggcttggacttcgtatacgcgtacgtctc	CRISPR spacer
gatatggcttggacttcgtatacgcgtacgtctc	Protospacer
**********************************

60. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
tcgcctggaccatcagcgagctcgccgaggtc	Protospacer
********************************

61. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
tcgcctggaccatcagcgagctcgccgaggtc	Protospacer
********************************

62. spacer 2.3|40837|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

ctcctgggcgagttggacgagcgcccgcacgtc	CRISPR spacer
ctcctgggcgagttggacgagcgcccgcacgtc	Protospacer
*********************************

63. spacer 2.3|40837|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

ctcctgggcgagttggacgagcgcccgcacgtc	CRISPR spacer
ctcctgggcgagttggacgagcgcccgcacgtc	Protospacer
*********************************

64. spacer 2.4|40899|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

tccaccccggcgtagtaccgccagaggatgacc	CRISPR spacer
tccaccccggcgtagtaccgccagaggatgacc	Protospacer
*********************************

65. spacer 2.4|40899|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

tccaccccggcgtagtaccgccagaggatgacc	CRISPR spacer
tccaccccggcgtagtaccgccagaggatgacc	Protospacer
*********************************

66. spacer 2.5|40961|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gtctggatggtgtgggccgtggtgtacagctc	CRISPR spacer
gtctggatggtgtgggccgtggtgtacagctc	Protospacer
********************************

67. spacer 2.5|40961|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gtctggatggtgtgggccgtggtgtacagctc	CRISPR spacer
gtctggatggtgtgggccgtggtgtacagctc	Protospacer
********************************

68. spacer 2.6|41022|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gccctccgtgtaagaggtgcggattttgtgggc	CRISPR spacer
gccctccgtgtaagaggtgcggattttgtgggc	Protospacer
*********************************

69. spacer 2.6|41022|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gccctccgtgtaagaggtgcggattttgtgggc	CRISPR spacer
gccctccgtgtaagaggtgcggattttgtgggc	Protospacer
*********************************

70. spacer 2.7|41084|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

cactggtggcatgtgttgcccggggcgctccgc	CRISPR spacer
cactggtggcatgtgttgcccggggcgctccgc	Protospacer
*********************************

71. spacer 2.7|41084|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

cactggtggcatgtgttgcccggggcgctccgc	CRISPR spacer
cactggtggcatgtgttgcccggggcgctccgc	Protospacer
*********************************

72. spacer 2.8|41146|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

aggccctatccgccgtggggaaggactggaggc	CRISPR spacer
aggccctatccgccgtggggaaggactggaggc	Protospacer
*********************************

73. spacer 2.8|41146|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

aggccctatccgccgtggggaaggactggaggc	CRISPR spacer
aggccctatccgccgtggggaaggactggaggc	Protospacer
*********************************

74. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
tcctgggaggccccccaggacctcgcggacga	Protospacer
********************************

75. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
tcctgggaggccccccaggacctcgcggacga	Protospacer
********************************

76. spacer 2.10|41269|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

ctttcctcacattctggcggaaagctttgctg	CRISPR spacer
ctttcctcacattctggcggaaagctttgctg	Protospacer
********************************

77. spacer 2.10|41269|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

ctttcctcacattctggcggaaagctttgctg	CRISPR spacer
ctttcctcacattctggcggaaagctttgctg	Protospacer
********************************

78. spacer 2.11|41330|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

aatcgccttgcgggtagaggcgtccggcacaa	CRISPR spacer
aatcgccttgcgggtagaggcgtccggcacaa	Protospacer
********************************

79. spacer 2.11|41330|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

aatcgccttgcgggtagaggcgtccggcacaa	CRISPR spacer
aatcgccttgcgggtagaggcgtccggcacaa	Protospacer
********************************

80. spacer 2.12|41391|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

caggcagcgtaagacgcagcccgtcacctggc	CRISPR spacer
caggcagcgtaagacgcagcccgtcacctggc	Protospacer
********************************

81. spacer 2.12|41391|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

caggcagcgtaagacgcagcccgtcacctggc	CRISPR spacer
caggcagcgtaagacgcagcccgtcacctggc	Protospacer
********************************

82. spacer 2.13|41452|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gagggaaccatgaagcaggttagcacgcaggca	CRISPR spacer
gagggaaccatgaagcaggttagcacgcaggca	Protospacer
*********************************

83. spacer 2.13|41452|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gagggaaccatgaagcaggttagcacgcaggca	CRISPR spacer
gagggaaccatgaagcaggttagcacgcaggca	Protospacer
*********************************

84. spacer 2.14|41514|32|NZ_AP019793|CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

tccggggcctcctccccaccttctaggggctc	CRISPR spacer
tccggggcctcctccccaccttctaggggctc	Protospacer
********************************

85. spacer 2.14|41514|32|NZ_AP019793|CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

tccggggcctcctccccaccttctaggggctc	CRISPR spacer
tccggggcctcctccccaccttctaggggctc	Protospacer
********************************

86. spacer 2.15|41575|32|NZ_AP019793|CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gggagcgcccggcacctcgcggccttcaaggt	CRISPR spacer
gggagcgcccggcacctcgcggccttcaaggt	Protospacer
********************************

87. spacer 2.15|41575|32|NZ_AP019793|CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gggagcgcccggcacctcgcggccttcaaggt	CRISPR spacer
gggagcgcccggcacctcgcggccttcaaggt	Protospacer
********************************

88. spacer 2.16|41636|32|NZ_AP019793|CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

atctccgatctagaggctcagggggtgttctg	CRISPR spacer
atctccgatctagaggctcagggggtgttctg	Protospacer
********************************

89. spacer 2.16|41636|32|NZ_AP019793|CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

atctccgatctagaggctcagggggtgttctg	CRISPR spacer
atctccgatctagaggctcagggggtgttctg	Protospacer
********************************

90. spacer 3.1|59993|39|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

gaggtgcgagatgcgtaactggcgcgcggcttggtacga	CRISPR spacer
gaggtgcgagatgcgtaactggcgcgcggcttggtacga	Protospacer
***************************************

91. spacer 3.1|59993|39|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

gaggtgcgagatgcgtaactggcgcgcggcttggtacga	CRISPR spacer
gaggtgcgagatgcgtaactggcgcgcggcttggtacga	Protospacer
***************************************

92. spacer 3.2|60068|38|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

tgagcctgagcctgtaccgaagtcttctttgccatagt	CRISPR spacer
tgagcctgagcctgtaccgaagtcttctttgccatagt	Protospacer
**************************************

93. spacer 3.2|60068|38|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

tgagcctgagcctgtaccgaagtcttctttgccatagt	CRISPR spacer
tgagcctgagcctgtaccgaagtcttctttgccatagt	Protospacer
**************************************

94. spacer 3.3|60142|43|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgccggaggcgtaggccttgagcgtagctttcacccctc	CRISPR spacer
cccttgccggaggcgtaggccttgagcgtagctttcacccctc	Protospacer
*******************************************

95. spacer 3.3|60142|43|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

cccttgccggaggcgtaggccttgagcgtagctttcacccctc	CRISPR spacer
cccttgccggaggcgtaggccttgagcgtagctttcacccctc	Protospacer
*******************************************

96. spacer 3.4|60221|41|NZ_AP019793|CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 0, identity: 1.0

tacctaagccttaccatgggtagcgatcccaatactcctcc	CRISPR spacer
tacctaagccttaccatgggtagcgatcccaatactcctcc	Protospacer
*****************************************

97. spacer 3.4|60221|41|NZ_AP019793|CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 0, identity: 1.0

tacctaagccttaccatgggtagcgatcccaatactcctcc	CRISPR spacer
tacctaagccttaccatgggtagcgatcccaatactcctcc	Protospacer
*****************************************

98. spacer 1.7|29646|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MK071653 (Meiothermus phage MMP7, complete genome) position: , mismatch: 1, identity: 0.969

ggtcgtctggtctgcgggcccgctggaggttg	CRISPR spacer
ggtcatctggtctgcgggcccgctggaggttg	Protospacer
****.***************************

99. spacer 1.7|29646|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MH939157 (UNVERIFIED: Meiothermus phage MMP17, complete genome) position: , mismatch: 1, identity: 0.969

ggtcgtctggtctgcgggcccgctggaggttg	CRISPR spacer
ggtcatctggtctgcgggcccgctggaggttg	Protospacer
****.***************************

100. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 2, identity: 0.938

gtccccggcggcggggatccccgccgccaggt--	CRISPR spacer
--ccccggcggcggggatccccgccgccaggtcg	Protospacer
  ******************************

101. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 2, identity: 0.938

gtccccggcggcggggatccccgccgccaggt--	CRISPR spacer
--ccccggcggcggggatccccgccgccaggtcg	Protospacer
  ******************************

102. spacer 2.13|41452|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_010878 (Thermus sp. 4C plasmid pL4C, complete sequence) position: , mismatch: 2, identity: 0.939

gagggaaccatgaagcaggttagcacgcaggca	CRISPR spacer
gaggaaaccatgaagcaggttagcacgcaggaa	Protospacer
****.************************** *

103. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019802 (Thermus thermophilus strain HC11 plasmid pHC11, complete sequence) position: , mismatch: 5, identity: 0.844

gtggtggggcccgtcctcgcggcggccatccg	CRISPR spacer
gtggtggggccggtcctcgcggcggccggttg	Protospacer
*********** ***************. ..*

104. spacer 1.2|29341|31|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_004808 (Streptomyces rochei plasmid pSLA2-L DNA, complete sequence) position: , mismatch: 6, identity: 0.806

gcttgcgggactcctccacggtctcggcgct	CRISPR spacer
ggtgccgggactcctccacggcctcggcggc	Protospacer
* *  ****************.******* .

105. spacer 1.2|29341|31|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MN703407 (Microbacterium phage Leaf, complete genome) position: , mismatch: 6, identity: 0.806

gcttgcgggactcctccacggtctcggcgct	CRISPR spacer
gcttgcgggcctcctcctcggtctcgtggtc	Protospacer
********* ******* ********  *..

106. spacer 1.2|29341|31|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MN703414 (Microbacterium phage Dewdrop, complete genome) position: , mismatch: 6, identity: 0.806

gcttgcgggactcctccacggtctcggcgct	CRISPR spacer
gcttgcgggcctcctcctcggtctcgtggtc	Protospacer
********* ******* ********  *..

107. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018921 (Pseudonocardia autotrophica strain NBRC 12743 plasmid pPA12743CP, complete sequence) position: , mismatch: 6, identity: 0.812

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
gacgacgccggcggcgatccccgccgccagct	Protospacer
* *  ** ****** *************** *

108. spacer 1.7|29646|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.812

-ggtcgtctggtctgcgggcccgctggaggttg	CRISPR spacer
cggccg-caggtctgcgggcccgcagcaggttc	Protospacer
 **.** * *************** * *****

109. spacer 1.12|29953|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to DQ115846 (Cyanobacteria phage AS-1 contig_39 genomic sequence) position: , mismatch: 6, identity: 0.812

---ccgagggtcacgaagccggcccagcggccatc	CRISPR spacer
gcttcgag---cacgaagccgtcccagcggccttc	Protospacer
   .****   ********** ********** **

110. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 6, identity: 0.812

gtggtggggcccgtcctcgcggcggccatccg	CRISPR spacer
ggggtggggctcctcctcgcggcggccacggg	Protospacer
* ********.* ***************.  *

111. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 6, identity: 0.812

gtggtggggcccgtcctcgcggcggccatccg	CRISPR spacer
ggggtggggctcctcctcgcggcggccacggg	Protospacer
* ********.* ***************.  *

112. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023065 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence) position: , mismatch: 6, identity: 0.812

gtggtggggcccgtcctcgcggcggccatccg	CRISPR spacer
gcgggcgggctcgtcctcgcggcggccctcca	Protospacer
*.**  ****.**************** ***.

113. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 6, identity: 0.812

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
cacgccgtcctggtccagcgtctggaacgggt	Protospacer
*.**  * .***********.***********

114. spacer 1.2|29341|31|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_009956 (Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI02, complete sequence) position: , mismatch: 7, identity: 0.774

gcttgcgggactcctccacggtctcggcgct	CRISPR spacer
gcgcccgggcctcctccagggtctcggcccg	Protospacer
** . **** ******** ********* *

115. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
cgacccggcggccgggatacccgccgcccgtt	Protospacer
   ********* ***** ********* * *

116. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

gtccccggcggcggggatccccg-ccgccaggt	CRISPR spacer
gtccccggcggcggggaccgccgaccactcga-	Protospacer
*****************.* *** **.*. *.

117. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP013104 (Bradyrhizobium elkanii USDA 61 plasmid pBel61, complete sequence) position: , mismatch: 7, identity: 0.781

---gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
ccaggcctcggcggc---gatcgccgccgccaggg	Protospacer
   * **.*******   **** ***********

118. spacer 1.12|29953|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 7, identity: 0.781

ccgagggtcacgaagccggcccagc---ggccatc	CRISPR spacer
cagagggtcatgaaggcggcccagcccaggct---	Protospacer
* ********.**** *********   ***.

119. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_014811 (Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence) position: , mismatch: 7, identity: 0.781

gtggtggggcccgtcctcgcggcggccatccg-	CRISPR spacer
gtggtgcggcccgtgctcgcggc-cccgcccac	Protospacer
****** ******* ********  **..**.

120. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.781

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
gacgccgtcctggtccagcgtctggaacgggt	Protospacer
 .**  * .***********.***********

121. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 7, identity: 0.781

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
gacgccgtcctggtccagcgtctggaacgggt	Protospacer
 .**  * .***********.***********

122. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 7, identity: 0.781

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
cacaccgtcctggtccagcgtctggaacgggt	Protospacer
*.*.  * .***********.***********

123. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 7, identity: 0.781

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
gacgccgtcctggtccagcgtctggaacgggt	Protospacer
 .**  * .***********.***********

124. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 7, identity: 0.781

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
cacaccgtcctggtccagcgtctggaacgggt	Protospacer
*.*.  * .***********.***********

125. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MG757166 (Gordonia phage SuperSulley, complete genome) position: , mismatch: 7, identity: 0.781

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ctggttcatctgctccagcacctggaacgggt	Protospacer
*  *   ***** ******.************

126. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MF919510 (Gordonia phage Kabluna, complete genome) position: , mismatch: 7, identity: 0.781

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ctggttcatctgctccagcacctggaacgggt	Protospacer
*  *   ***** ******.************

127. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MK376962 (Gordonia phage NosilaM, complete genome) position: , mismatch: 7, identity: 0.781

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ctggttcatctgctccagcacctggaacgggt	Protospacer
*  *   ***** ******.************

128. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MH779499 (Gordonia phage Buggaboo, complete genome) position: , mismatch: 7, identity: 0.781

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ctggttcatctgctccagcacctggaacgggt	Protospacer
*  *   ***** ******.************

129. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 7, identity: 0.781

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ctcggtgatctggtcaagcgcctggcgcaggg	Protospacer
* *** ********* ********* .*.**

130. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041206 (Rhizobium sp. NIBRBAC000502774 plasmid pMK-3, complete sequence) position: , mismatch: 7, identity: 0.781

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
tggcgcggaccattagcgagcttgccgagggg	Protospacer
* ** .*******.********.*******

131. spacer 2.3|40837|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 7, identity: 0.788

ctcctgggcgagttggacgagcgcccgcacgtc	CRISPR spacer
ttcctggttgagttggacgagcgccttctcgac	Protospacer
.****** .****************. * ** *

132. spacer 2.3|40837|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 7, identity: 0.788

ctcctgggcgagttggacgagcgcccgcacgtc	CRISPR spacer
cacctgggcgagctggacgaccgccccggcgac	Protospacer
* **********.******* *****  .** *

133. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 7, identity: 0.781

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
ggcgaggaggccctccagggcctcgcggacgg	Protospacer
  * .********.*****.***********.

134. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 7, identity: 0.781

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
ggcgaggaggccctccagggcctcgcggacgg	Protospacer
  * .********.*****.***********.

135. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_005838 (Thermus thermophilus HB27 plasmid pTT27, complete sequence) position: , mismatch: 7, identity: 0.781

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
ggcgaggaggccctccagggcctcgcggacgg	Protospacer
  * .********.*****.***********.

136. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029776 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
ttccaggtcgcccccgaggacctcgcgggcga	Protospacer
*.*..**  ****** ************.***

137. spacer 2.15|41575|32|NZ_AP019793|CRISPRCasFinder,CRT matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.781

gggagcgcccggcacctcgcggccttcaaggt	CRISPR spacer
gcgcgcgcccggcccctggcggccttcgaaat	Protospacer
* * ********* *** *********.*..*

138. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035421 (Leisingera sp. NJS204 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
ccccgaggcggcggtgaaccccgccgccagcc	Protospacer
 .**  ******** ** ************ .

139. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038238 (Leisingera sp. NJS201 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
ccccgaggcggcggtgaaccccgccgccagcc	Protospacer
 .**  ******** ** ************ .

140. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 8, identity: 0.75

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
ggcagcggcggcggggatacccgctgccgcgg	Protospacer
* *  ************* *****.***. *

141. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046574 (Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence) position: , mismatch: 8, identity: 0.75

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
ggcagcggcggcggggatacccgctgccgcgg	Protospacer
* *  ************* *****.***. *

142. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.75

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
gccaccggcggcggcgatccccgcggcgggcc	Protospacer
*.* ********** ********* ** .* .

143. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049162 (Pseudomonas aeruginosa strain MS14403 plasmid pMS14403A, complete sequence) position: , mismatch: 8, identity: 0.75

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
gaagcggcgggcggggatccacgccaccaggt	Protospacer
*   * *  *********** ****.******

144. spacer 1.12|29953|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_042132 (Gordonia phage Sour, complete genome) position: , mismatch: 8, identity: 0.75

ccgagggtcacgaagccggcccagcggccatc	CRISPR spacer
ttgacgaagacgaatccggcccagcggccctc	Protospacer
..** *.  ***** ************** **

145. spacer 1.17|30261|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MF403007 (Agrobacterium phage Atu_ph04, complete genome) position: , mismatch: 8, identity: 0.75

ccttccctttctcgtagaaggcgccttcccct	CRISPR spacer
ccttccacttctcgtagaaggcgcgacagtct	Protospacer
****** .****************  .  .**

146. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_010335 (Caulobacter sp. K31 plasmid pCAUL01, complete sequence) position: , mismatch: 8, identity: 0.75

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
atgggggatctggcccagcgcctggagcccgc	Protospacer
   **********.************.*  *.

147. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017657 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_3, complete sequence) position: , mismatch: 8, identity: 0.75

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
cggcctgatctggtccagcgcctcgatcgcgc	Protospacer
**    ***************** ** ** *.

148. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026974 (Achromobacter insolitus strain FDAARGOS_88 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ggcggtgatctggtccaccgcctgttgcaggg	Protospacer
 **** *********** ******  .*.**

149. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MK620897 (Microbacterium phage Rhysand, complete genome) position: , mismatch: 8, identity: 0.75

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ttcgcggatctggtcgagcgcctggcgtggct	Protospacer
. ** ********** ********* ..** *

150. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MT316459 (Microbacterium phage Otwor, complete genome) position: , mismatch: 8, identity: 0.75

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ttcgcggatctggtcgagcgcctggcgtggct	Protospacer
. ** ********** ********* ..** *

151. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MH509441 (Mycobacterium phage Acolyte, complete genome) position: , mismatch: 8, identity: 0.75

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ccagcagacctggtacagcgcctggaacgcga	Protospacer
*  * .**.***** ************** *

152. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MT316462 (Microbacterium phage Danno, complete genome) position: , mismatch: 8, identity: 0.75

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ttcgcggatctggtcgagcgcctggcgtggct	Protospacer
. ** ********** ********* ..** *

153. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MN329679 (Microbacterium phage Vanisius, complete genome) position: , mismatch: 8, identity: 0.75

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ttcgcggatctggtcgagcgcctggcgtggct	Protospacer
. ** ********** ********* ..** *

154. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MK894434 (Microbacterium phage LaviMo, complete genome) position: , mismatch: 8, identity: 0.75

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ttcgcggatctggtcgagcgcctggcgtggct	Protospacer
. ** ********** ********* ..** *

155. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MN369745 (Microbacterium phage Kaijohn, complete genome) position: , mismatch: 8, identity: 0.75

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ttcgcggatctggtcgagcgcctggcgtggct	Protospacer
. ** ********** ********* ..** *

156. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MH576963 (Microbacterium phage Scamander, complete genome) position: , mismatch: 8, identity: 0.75

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
ttcgcggatctggtcgagcgcctggcgtggct	Protospacer
. ** ********** ********* ..** *

157. spacer 1.26|30814|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_017791 (Deinococcus gobiensis I-0 plasmid P2, complete sequence) position: , mismatch: 8, identity: 0.75

tcctgggcccactgtggaggctgaggaaaccc	CRISPR spacer
tggtgggcccactgcggaggttgaggttctcc	Protospacer
*  ***********.*****.*****   .**

158. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_008270 (Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence) position: , mismatch: 8, identity: 0.75

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
aggtgcgcaccagcagcgagctcaccgaggtc	Protospacer
  *. .* **** **********.********

159. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009154 (Burkholderia pseudomallei strain TSV202 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
acgcgaagaccatcaccgagcacgccgaggca	Protospacer
 ***  .******** ***** ********.

160. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017943 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
agtcctggaccatcgacgagctcgccaggttc	Protospacer
   ***********..**********..* **

161. spacer 2.5|40961|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_023286 (Streptomyces sp. F12 plasmid pFRL6, complete sequence) position: , mismatch: 8, identity: 0.75

gtctggatggtgtgggccgtggtgtacagctc	CRISPR spacer
gtctggatggtgtggcccgcggtggccggggt	Protospacer
*************** ***.****  *.*  .

162. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU130294 (Pseudomonas putida strain 12969 plasmid p12969-DIM, complete sequence) position: , mismatch: 8, identity: 0.75

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
caccgggagggaccccaggacctcgcggagtg	Protospacer
. *.******  *****************  .

163. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039989 (Pseudomonas aeruginosa strain T2436 plasmid pBT2436, complete sequence) position: , mismatch: 8, identity: 0.75

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
caccgggagggaccccaggacctcgcggagtg	Protospacer
. *.******  *****************  .

164. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053709 (Acetobacteraceae bacterium strain PAMC 26569 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

----tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
cagatc----gaggcgccccagggcctcgcggaccg	Protospacer
    **    ***** *******.********** .

165. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_019387 (Thermus oshimai JL-2 plasmid pTHEOS01, complete sequence) position: , mismatch: 8, identity: 0.75

----tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
gaactc----gagcccccccaggacctcgaggaggt	Protospacer
    **    *** *************** *** *

166. spacer 2.15|41575|32|NZ_AP019793|CRISPRCasFinder,CRT matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 8, identity: 0.75

gggagcgcccggcacctcgcggccttcaaggt	CRISPR spacer
ctcagcgcccgggacctcgcggccgtcatgac	Protospacer
   ********* *********** *** *..

167. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgagcgggttcacgccgtgctgtcgctcgat	Protospacer
*****.************** ***      **

168. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021813 (Sinorhizobium meliloti strain M270 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgagcgggttcacgccgtgctgtcgctcgat	Protospacer
*****.************** ***      **

169. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgagcgggttcacgccgtgctgtcgctcgac	Protospacer
*****.************** ***      **

170. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgagcgggttcacgccgtgctgtcgctcgat	Protospacer
*****.************** ***      **

171. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgagcgggttcacgccgtgctgtcgctcgac	Protospacer
*****.************** ***      **

172. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgagcgggttcacgccgtgctgtcgctcgac	Protospacer
*****.************** ***      **

173. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgagcgggttcacgccgtgctgtcgctcgac	Protospacer
*****.************** ***      **

174. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgagcgggttcacgccgtgctgtcgctcgac	Protospacer
*****.************** ***      **

175. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgagcgggttcacgccgtgctgtcgctcgac	Protospacer
*****.************** ***      **

176. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgagcgggttcacgccgtgctgtcgctcgat	Protospacer
*****.************** ***      **

177. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgagcgggttcacgccgtgctgtcgctcgac	Protospacer
*****.************** ***      **

178. spacer 1.1|29279|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgaacgggttcacgccgtcctgggtgaagag	CRISPR spacer
ggcgagcgggttcacgccgtgctgtcgctcgac	Protospacer
*****.************** ***      **

179. spacer 1.2|29341|31|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to CP042595 (Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence) position: , mismatch: 9, identity: 0.71

gcttgcgggactcctccacggtctcggcgct	CRISPR spacer
acactcgggactccttcactgtctcggcctg	Protospacer
.* . **********.*** ******** .

180. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
gccacgtccacgccctcgcggatgacctccag	Protospacer
 .  . ****** ***.**************

181. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
ttgttttccacgcgcttgcggatatctgcttc	Protospacer
************  *********. *. *. .

182. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
ttgttttccacgcgcttgcggatatctgcttc	Protospacer
************  *********. *. *. .

183. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
aggatccgcacggcctcgcggaagacctccac	Protospacer
  * *.. ********.***** ********.

184. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
ttgttttccacgcgcttgcggatatctgcttc	Protospacer
************  *********. *. *. .

185. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
aggatccgcacggcctcgcggaagacctccac	Protospacer
  * *.. ********.***** ********.

186. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
ttgttttccacgcgcttgcggatatctgcttc	Protospacer
************  *********. *. *. .

187. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.719

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
ttgttttccacgcgcttgcggatatctgcttc	Protospacer
************  *********. *. *. .

188. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to KU998244 (Gordonia phage Smoothie, complete genome) position: , mismatch: 9, identity: 0.719

gtccccggcggcggggatccccgccgccaggt--	CRISPR spacer
--cgctgccggcggggatccccaccgccgcgaag	Protospacer
  * *.* **************.*****. *

189. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MF919520 (Gordonia phage Lozinak, complete genome) position: , mismatch: 9, identity: 0.719

gtccccggcggcggggatccccgccgccaggt--	CRISPR spacer
--cgctgccggcggggatccccaccgccgcgaag	Protospacer
  * *.* **************.*****. *

190. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_030901 (Gordonia phage ClubL, complete genome) position: , mismatch: 9, identity: 0.719

gtccccggcggcggggatccccgccgccaggt--	CRISPR spacer
--cgctgccggcggggatccccaccgccgcgaag	Protospacer
  * *.* **************.*****. *

191. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

gtccccggcggcggggatccccgccgccaggt--	CRISPR spacer
gccgcca--ggcgcggatccccgccgccgaggag	Protospacer
*.* **.  **** **************..*

192. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to CP036421 (Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
ggggacggcggcgggcatccccgcccccggcg	Protospacer
*    ********** ********* **.*

193. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013071 (Sphingobium indicum B90A plasmid pSRL1, complete sequence) position: , mismatch: 9, identity: 0.719

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
gatcggcgcggcggggacgcccgccgccagca	Protospacer
* .*   **********. ***********

194. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.719

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
ggaaacggcggcggcgatccgcgccgccctgg	Protospacer
*    ********* ***** *******  *

195. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_016652 (Rhodococcus phage REQ2, complete genome) position: , mismatch: 9, identity: 0.719

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
gaagccggcggcggggatcccggacgcggatt	Protospacer
*   ***************** * *** .. *

196. spacer 1.9|29769|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to KX752698 (Mycobacterium phage Tonenili, complete genome) position: , mismatch: 9, identity: 0.727

gcccttgggccactcggggcgctccgcgtggac	CRISPR spacer
ccccgtgggccacccggggcgctccgcacctgt	Protospacer
 *** ********.*************..  ..

197. spacer 1.10|29831|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046723 (Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence) position: , mismatch: 9, identity: 0.719

atgatctcgttggtggagctgcggacgagccc	CRISPR spacer
ttgatctcgtcggtggtgctgcggaagctgtt	Protospacer
 *********.***** ******** *   ..

198. spacer 1.10|29831|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atgatctcgttggtggagctgcggacgagccc	CRISPR spacer
ttgatctcgtcggtggtgctgcggaagctgtt	Protospacer
 *********.***** ******** *   ..

199. spacer 1.10|29831|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045721 (Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atgatctcgttggtggagctgcggacgagccc	CRISPR spacer
ttgatctcgtcggtggtgctgcggaagctgtt	Protospacer
 *********.***** ******** *   ..

200. spacer 1.10|29831|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 9, identity: 0.719

atgatctcgttggtggagctgcggacgagccc	CRISPR spacer
ttgatctcgtcggtggtgctgcggaagctgtt	Protospacer
 *********.***** ******** *   ..

201. spacer 1.10|29831|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034149 (Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence) position: , mismatch: 9, identity: 0.719

atgatctcgttggtggagctgcggacgagccc	CRISPR spacer
ttgatctcgtcggtggtgctgcggaagctgtt	Protospacer
 *********.***** ******** *   ..

202. spacer 1.10|29831|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 9, identity: 0.719

atgatctcgttggtggagctgcggacgagccc	CRISPR spacer
ttgatctcgtcggtggtgctgcggaagctgtt	Protospacer
 *********.***** ******** *   ..

203. spacer 1.10|29831|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031650 (Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atgatctcgttggtggagctgcggacgagccc	CRISPR spacer
ttgatctcgtcggtggtgctgcggaagctgtt	Protospacer
 *********.***** ******** *   ..

204. spacer 1.10|29831|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atgatctcgttggtggagctgcggacgagccc	CRISPR spacer
ttgatctcgtcggtggtgctgcggaagctgtt	Protospacer
 *********.***** ******** *   ..

205. spacer 1.11|29892|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to CP053577 (Salmonella enterica strain 2012K-0845 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gtgaaggggcaggggccccggccgggaaatct	CRISPR spacer
ggtcaggggcaggggccgcggcggggagggat	Protospacer
*   ************* **** ****..  *

206. spacer 1.12|29953|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_010408 (Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1, complete sequence) position: , mismatch: 9, identity: 0.719

ccgagggtcacgaagccggcccagcggccatc	CRISPR spacer
cacggcgtcaccaagccggcccagcagcccat	Protospacer
*  .* ***** *************.***  .

207. spacer 1.12|29953|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134450 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence) position: , mismatch: 9, identity: 0.719

ccgagggtcacgaagccggcccagcggccatc-----	CRISPR spacer
gcgagggtcacggagccggcgcagt-----tcgacgc	Protospacer
 ***********.******* ***.     **

208. spacer 1.14|30076|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.727

gtggcggttcttttgacggcggcgttggctcaa	CRISPR spacer
ggtgcggtttttttgtcggcggcgttgccggtt	Protospacer
*  ******.***** *********** *

209. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049751 (Rhodococcus fascians A21d2 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gtggtggggcccgtcctcgcggcggccatccg	CRISPR spacer
ctcgaccagctcgtcctcgcggcggcgatcct	Protospacer
 * *   .**.*************** ****

210. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.719

gtggtggggcccgtcctcgcggcggccatccg	CRISPR spacer
ggccagtcgcccgtcgtcgcgacggccatcca	Protospacer
*    *  ******* *****.*********.

211. spacer 1.21|30507|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 9, identity: 0.719

ccaatcgcctggaccgccgccgcgtagcgtcc	CRISPR spacer
cccatcgcccggaccgccgccgccagcagctc	Protospacer
** ******.*************  .  *..*

212. spacer 1.21|30507|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 9, identity: 0.719

ccaatcgcctggaccgccgccgcgtagcgtcc	CRISPR spacer
cccatcgcccggaccgccgccgccagcagctc	Protospacer
** ******.*************  .  *..*

213. spacer 1.21|30507|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ccaatcgcctggaccgccgccgcgtagcgtcc	CRISPR spacer
tcgtcggcctcgatcgccgccgcgtagcgacg	Protospacer
.*. . **** **.*************** *

214. spacer 1.21|30507|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 9, identity: 0.719

ccaatcgcctggaccgccgccgcgtagcgtcc	CRISPR spacer
cccatcgcccggaccgccgccgccagcagctc	Protospacer
** ******.*************  .  *..*

215. spacer 1.21|30507|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccaatcgcctggaccgccgccgcgtagcgtcc	CRISPR spacer
agggtggccggcaccgccgccgcgtagcggtc	Protospacer
  ..* *** * ***************** .*

216. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013109 (Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence) position: , mismatch: 9, identity: 0.719

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
agcgctggaccatccgcgagctcgccgaatgg	Protospacer
    ********** *************.

217. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_008738 (Marinobacter hydrocarbonoclasticus VT8 plasmid pMAQU01, complete sequence) position: , mismatch: 9, identity: 0.719

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
cacattacaccatcagcgagctggcggaggtc	Protospacer
.   .*. ************** ** ******

218. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 9, identity: 0.719

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
cggatcagactatccgcgagctcgccgagggc	Protospacer
. * ...***.*** *************** *

219. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MN693916 (Marine virus AFVG_250M613, complete genome) position: , mismatch: 9, identity: 0.719

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
gcatcgattccatcagcgagatcgcagaggtc	Protospacer
 *..* .  *********** **** ******

220. spacer 2.3|40837|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MT740732 (Ralstonia phage Darius, complete genome) position: , mismatch: 9, identity: 0.727

ctcctgggcgagttggacgagcgcccgcacgtc	CRISPR spacer
agcctgggcgagctggtcgagcgcccaacgatc	Protospacer
  **********.*** *********.   .**

221. spacer 2.3|40837|33|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to MT740740 (Ralstonia phage Gervaise, complete genome) position: , mismatch: 9, identity: 0.727

ctcctgggcgagttggacgagcgcccgcacgtc	CRISPR spacer
agcctgggcgagctggtcgagcgcccaacgatc	Protospacer
  **********.*** *********.   .**

222. spacer 2.5|40961|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019438 (Thioclava nitratireducens strain 25B10_4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gtctggatggtgtgggccgtggtgtacagctc	CRISPR spacer
gtctggatggtgtggtccgtcgtcgtcgccaa	Protospacer
*************** **** **   *. *

223. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_006462 (Thermus thermophilus HB8 plasmid pTT27, complete sequence) position: , mismatch: 9, identity: 0.719

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
ggcggcgaggccctccaggacctcccggagtt	Protospacer
  * * *******.********** ****

224. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_017588 (Thermus thermophilus JL-18 plasmid pTTJL1801, complete sequence) position: , mismatch: 9, identity: 0.719

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
ggcggcgaggccctccaggacctcccggagtt	Protospacer
  * * *******.********** ****

225. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR027520 (Thermus thermophilus isolate TTHNAR1 plasmid 4, complete sequence) position: , mismatch: 9, identity: 0.719

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
ggcggcgaggccctccaggacctcccggagtt	Protospacer
  * * *******.********** ****

226. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
cagcgacatgccccccaggacgtcgccgacga	Protospacer
.  .*. * ************ **** *****

227. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019802 (Thermus thermophilus strain HC11 plasmid pHC11, complete sequence) position: , mismatch: 9, identity: 0.719

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
ggcggcgaggccctccaggacctcccggagtt	Protospacer
  * * *******.********** ****

228. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
cggtccgaggccgcccagggcctcgcggaggc	Protospacer
.  *  ****** ******.********* *

229. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023976 (Streptomyces alboflavus strain MDJK44 plasmid pMDJK44.1, complete sequence) position: , mismatch: 9, identity: 0.719

tcctgggaggccccccaggacctcgcggacga	CRISPR spacer
cccgaacgcgccgcccaggccctcgcggacga	Protospacer
.** .. . *** ****** ************

230. spacer 2.9|41208|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to CP042595 (Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence) position: , mismatch: 9, identity: 0.719

tcctggga----ggccccccaggacctcgcggacga	CRISPR spacer
----aagaacccggccgcccaggacttcgcggacgg	Protospacer
    ..**    **** ********.*********.

231. spacer 2.11|41330|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

aatcgccttgcgggtagaggcgtccggcacaa	CRISPR spacer
catcgccttgcgggtggcggcgtcgaggaagg	Protospacer
 **************.* ****** .* * ..

232. spacer 2.11|41330|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

aatcgccttgcgggtagaggcgtccggcacaa	CRISPR spacer
catcgccttgcgggtcgcggcgtcgaggaagg	Protospacer
 ************** * ****** .* * ..

233. spacer 2.11|41330|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 9, identity: 0.719

aatcgccttgcgggtagaggcgtccggcacaa	CRISPR spacer
catcgccttgcgggtggcggcgtcgaggaagg	Protospacer
 **************.* ****** .* * ..

234. spacer 2.11|41330|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 9, identity: 0.719

aatcgccttgcgggtagaggcgtccggcacaa	CRISPR spacer
catcgccttgcgggtggcggcgtcgaggaacg	Protospacer
 **************.* ****** .* *  .

235. spacer 2.11|41330|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 9, identity: 0.719

aatcgccttgcgggtagaggcgtccggcacaa	CRISPR spacer
catcgccttgcgggtggcggcgtcgaggaacg	Protospacer
 **************.* ****** .* *  .

236. spacer 2.11|41330|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 9, identity: 0.719

aatcgccttgcgggtagaggcgtccggcacaa	CRISPR spacer
catcgccttgcgggtggcggcgtcgaggaagg	Protospacer
 **************.* ****** .* * ..

237. spacer 2.11|41330|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

aatcgccttgcgggtagaggcgtccggcacaa	CRISPR spacer
catcgccttgcgggtggcggcgtcgaggaagg	Protospacer
 **************.* ****** .* * ..

238. spacer 2.11|41330|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

aatcgccttgcgggtagaggcgtccggcacaa	CRISPR spacer
catcgccttgcgggtggcggcgtcgaggaacg	Protospacer
 **************.* ****** .* *  .

239. spacer 2.11|41330|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

aatcgccttgcgggtagaggcgtccggcacaa	CRISPR spacer
catcgccttgcgggtcgcggcgtcgaggaagg	Protospacer
 ************** * ****** .* * ..

240. spacer 2.11|41330|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 9, identity: 0.719

aatcgccttgcgggtagaggcgtccggcacaa	CRISPR spacer
catcgccttgcgggtggcggcgtcgaggaagg	Protospacer
 **************.* ****** .* * ..

241. spacer 2.15|41575|32|NZ_AP019793|CRISPRCasFinder,CRT matches to NC_010627 (Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence) position: , mismatch: 9, identity: 0.719

gggagcgcccggcacctcgcggccttcaaggt	CRISPR spacer
cgccgcgccctgcacgtcgcggccttcgtgcg	Protospacer
 *  ****** **** ***********. *

242. spacer 2.16|41636|32|NZ_AP019793|CRISPRCasFinder,CRT matches to NC_009339 (Mycolicibacterium gilvum PYR-GCK plasmid pMFLV01, complete sequence) position: , mismatch: 9, identity: 0.719

atctccgatctagaggctcagggggtgttctg	CRISPR spacer
ccgcgccatcgagaggctcagggggtgatcgg	Protospacer
 . . * *** **************** ** *

243. spacer 2.16|41636|32|NZ_AP019793|CRISPRCasFinder,CRT matches to NC_008703 (Mycobacterium sp. KMS plasmid pMKMS01, complete sequence) position: , mismatch: 9, identity: 0.719

atctccgatctagaggctcagggggtgttctg	CRISPR spacer
ccgcgccatcgagaggctcagggggtgatcgg	Protospacer
 . . * *** **************** ** *

244. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050098 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence) position: , mismatch: 10, identity: 0.688

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
agaatccgcacggcctcgcggaagacctccac	Protospacer
  . *.. ********.***** ********.

245. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053440 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence) position: , mismatch: 10, identity: 0.688

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
agaatccgcacggcctcgcggaagacctccac	Protospacer
  . *.. ********.***** ********.

246. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048281 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence) position: , mismatch: 10, identity: 0.688

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
agaatccgcacggcctcgcggaagacctccac	Protospacer
  . *.. ********.***** ********.

247. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
agaatcctcacggcctcgcggaagacctccac	Protospacer
  . *...********.***** ********.

248. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 10, identity: 0.688

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
agaatcctcacggcctcgcggaagacctccac	Protospacer
  . *...********.***** ********.

249. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 10, identity: 0.688

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
agaatccgcacggcctcgcggaagacctccac	Protospacer
  . *.. ********.***** ********.

250. spacer 1.5|29524|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 10, identity: 0.688

ttgttttccacggccttgcggatgacctccat	CRISPR spacer
agaatcctcacggcctcgcggaagacctccac	Protospacer
  . *...********.***** ********.

251. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to CP036421 (Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gtccccggcggcggggatccccgccgccaggt--	CRISPR spacer
--ggacggcggcgggcatccccgcccccggcgta	Protospacer
     ********** ********* **.*

252. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 10, identity: 0.688

gtccccggcggcggggatccccgccgccaggt--	CRISPR spacer
--ccggcgcggcggggatcgcagccgccggcggc	Protospacer
  **   ************ * ******.*

253. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 10, identity: 0.688

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
gctggaggcggcggggatccccttcgccaaca	Protospacer
*..   **************** .*****.

254. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 10, identity: 0.688

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
ggggccggcggcggagatcctcgccgcggccg	Protospacer
*   **********.*****.****** .

255. spacer 1.7|29646|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_012527 (Deinococcus deserti VCD115 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

ggtcgtctggtctgcgggcccgctggaggttg	CRISPR spacer
cggaccctggcctgcgggcacgctggaggcga	Protospacer
 *   .****.******** *********. .

256. spacer 1.10|29831|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022517 (Pantoea vagans strain FBS135 plasmid pPant1, complete sequence) position: , mismatch: 10, identity: 0.688

atgatctcgttggtggagctgcggacgagccc	CRISPR spacer
ttgatctcgtcggtggtgctgcggaaactgtt	Protospacer
 *********.***** ******** .   ..

257. spacer 1.11|29892|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017078 (Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence) position: , mismatch: 10, identity: 0.688

gtgaaggggcaggggccccggccgggaaatct	CRISPR spacer
tcggcggggcaggggtcccggccgagaacctc	Protospacer
 .*. **********.********.*** ...

258. spacer 1.11|29892|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 10, identity: 0.688

gtgaaggggcaggggccccggccgggaaatct	CRISPR spacer
tgaaaggtgcaggggccgcggccgggcttgcc	Protospacer
  .**** ********* ********    *.

259. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

gtggtggggcccgtcctcgcggcggccatccg	CRISPR spacer
caggtggagaccgtcctcgcggcggtggacgc	Protospacer
  *****.* ***************. . *

260. spacer 1.21|30507|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_008242 (Chelativorans sp. BNC1 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

ccaatcgcctggaccgccgccgcgtagcgtcc	CRISPR spacer
tcggtcgcctcgaccgccgcctcgtaggcggg	Protospacer
.*..****** ********** *****

261. spacer 1.22|30568|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_015951 (Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggatctggtccagcgcctggaacgggt	CRISPR spacer
gaaggggaactggtcgagcgcctggaggtact	Protospacer
 . ***** ****** **********.  . *

262. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 10, identity: 0.688

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
agcgttggaccatccgcgagctcgccgaatgg	Protospacer
    .********* *************.

263. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013052 (Sinorhizobium americanum CCGM7 plasmid A, complete sequence) position: , mismatch: 10, identity: 0.688

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
agcgttggaccatccgcgagctcgccgaatgg	Protospacer
    .********* *************.

264. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032687 (Rhizobium sp. CCGE531 plasmid pRCCGE531b, complete sequence) position: , mismatch: 10, identity: 0.688

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
agcgctggacgatcagggagctcgccgaatgg	Protospacer
    ****** ***** ***********.

265. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032692 (Rhizobium sp. CCGE532 plasmid pRCCGE532b, complete sequence) position: , mismatch: 10, identity: 0.688

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
agcgctggacgatcagggagctcgccgaatgg	Protospacer
    ****** ***** ***********.

266. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_020061 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899b, complete sequence) position: , mismatch: 10, identity: 0.688

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
agcgctggacgatcagggagctcgccgaatgg	Protospacer
    ****** ***** ***********.

267. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 11, identity: 0.656

gtccccggcggcggggatccccgccgccaggt--	CRISPR spacer
--ggcgcgcggcggggatcctcgcccccggccca	Protospacer
    *  *************.**** **.* .

268. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 11, identity: 0.656

gtccccggcggcggggatccccgccgccaggt--	CRISPR spacer
--ggcgcgcggcggggatcctcgcccccggccca	Protospacer
    *  *************.**** **.* .

269. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 11, identity: 0.656

gtccccggcggcggggatccccgccgccaggt--	CRISPR spacer
--ggcgcgcggcggggatcctcgcccccggccca	Protospacer
    *  *************.**** **.* .

270. spacer 1.6|29585|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035506 (Haematobacter massiliensis strain OT1 plasmid pOT1-6, complete sequence) position: , mismatch: 11, identity: 0.656

gtccccggcggcggggatccccgccgccaggt	CRISPR spacer
cggatcggcggcggggatcgccgcggccttca	Protospacer
    .************** **** ***

271. spacer 1.20|30446|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NC_018022 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.01, complete sequence) position: , mismatch: 11, identity: 0.656

gtggtggggcccgtcctcgcggcggccatccg	CRISPR spacer
taggtggggcccgtcctcgtcgcgggtgcggt	Protospacer
  *****************. **** ...

272. spacer 2.2|40776|32|NZ_AP019793|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 11, identity: 0.656

tcgcctggaccatcagcgagctcgccgaggtc	CRISPR spacer
gaagaccgaccatccgcgatctcgccgaggcg	Protospacer
  .  . ******* **** **********.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

70031 : 122350

Synechococcus_phage(20.0%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_143587370.1\|70031_70853_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A1V0SCZ1	Indivirus	9.8e-12	30.6
WP_143587112.1\|70947_72330_+	glucose-6-phosphate dehydrogenase	E3SJC5	Synechococcus_phage	3.5e-70	36.8
WP_172619239.1\|72333_73242_+	NADP-dependent phosphogluconate dehydrogenase	A0A1D7SKG4	Cyanophage	6.5e-49	37.9
WP_143587114.1\|73238_73886_+	6-phosphogluconolactonase	NA	NA	NA	NA
WP_143587116.1\|73886_76160_+	glucan 1,4-alpha-glucosidase	NA	NA	NA	NA
WP_143587118.1\|76163_76757_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_143587120.1\|76766_77342_+	TSUP family transporter	NA	NA	NA	NA
WP_143587122.1\|77345_77696_+	DUF1634 domain-containing protein	NA	NA	NA	NA
WP_143587124.1\|77747_78248_+	VIT family protein	NA	NA	NA	NA
WP_172619240.1\|78273_78897_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_143587128.1\|78995_79412_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_143587130.1\|79466_79937_+	hypothetical protein	NA	NA	NA	NA
WP_143587132.1\|79939_80590_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_143587134.1\|81370_82444_+	HAMP domain-containing protein	NA	NA	NA	NA
WP_143587136.1\|82468_83422_+	PIG-L family deacetylase	NA	NA	NA	NA
WP_143587138.1\|83418_83937_-	DUF421 domain-containing protein	NA	NA	NA	NA
WP_143587374.1\|84018_85248_+	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_143587140.1\|85308_85851_+	hypothetical protein	NA	NA	NA	NA
WP_143587142.1\|86152_87820_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_143587144.1\|87829_89071_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	4.0e-33	37.9
WP_143587146.1\|89194_89515_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_143587150.1\|89698_90745_+	hypothetical protein	NA	NA	NA	NA
WP_143587152.1\|90791_91976_+	c-type cytochrome	NA	NA	NA	NA
WP_172619241.1\|92152_92302_-	hypothetical protein	NA	NA	NA	NA
WP_081490856.1\|92464_92743_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_143587154.1\|92769_93132_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_143587376.1\|93688_94093_+\|transposase	IS200/IS605 family transposase	A0A0A8WIU6	Clostridium_phage	5.9e-26	45.4
WP_143587156.1\|94089_95292_+\|transposase	transposase	A0A068A1P5	Thermus_phage	2.0e-69	40.1
WP_143587158.1\|95304_95556_+	site-specific DNA-methyltransferase	M4QPL0	Synechococcus_phage	1.2e-16	51.2
WP_143587160.1\|97406_97634_+	DUF2141 domain-containing protein	NA	NA	NA	NA
WP_143587163.1\|98901_99084_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_143587165.1\|99202_100375_+	hypothetical protein	NA	NA	NA	NA
WP_143587167.1\|100456_100999_+	YceI family protein	NA	NA	NA	NA
WP_143587169.1\|100995_101790_+	cytochrome c3 family protein	NA	NA	NA	NA
WP_143587171.1\|101786_102209_+	hypothetical protein	NA	NA	NA	NA
WP_143587173.1\|102205_102862_+	response regulator	W8CYM9	Bacillus_phage	3.6e-17	30.0
WP_143587175.1\|102858_104073_+	HAMP domain-containing protein	NA	NA	NA	NA
WP_143587177.1\|104056_104641_+	hypothetical protein	NA	NA	NA	NA
WP_143587178.1\|104713_105675_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_011174362.1\|106044_106458_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_143587181.1\|106454_106685_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_143587378.1\|106917_107880_+	recombinase XerD	NA	NA	NA	NA
WP_172619242.1\|107985_108138_-	hypothetical protein	NA	NA	NA	NA
WP_172619243.1\|108134_108974_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_143587185.1\|109202_109979_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_143587187.1\|109986_111495_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_143587189.1\|111505_112201_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_024119810.1\|112197_112392_-	tautomerase family protein	NA	NA	NA	NA
WP_143587191.1\|112392_112818_-	DMT family transporter	NA	NA	NA	NA
WP_143587193.1\|112820_113678_-	NAD-binding protein	NA	NA	NA	NA
WP_143587195.1\|113687_114731_-	4-hydroxy-2-oxovalerate aldolase	E5EQ69	Micromonas_sp._RCC1109_virus	5.2e-42	31.5
WP_143587197.1\|114727_115648_-	acetaldehyde dehydrogenase (acetylating)	G8DDL4	Micromonas_pusilla_virus	7.6e-37	34.3
WP_143587199.1\|115629_116400_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_143587201.1\|116574_116982_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_143587203.1\|116982_117966_+	catechol 2,3-dioxygenase	NA	NA	NA	NA
WP_143584933.1\|118533_119634_+\|transposase	transposase	NA	NA	NA	NA
WP_143587205.1\|120178_120976_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_143584933.1\|121249_122350_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_AP019792

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP019792_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019792_1

1195947-1196024

Orphan

Consensus_repeat	Method
ATCCAAAGCCTGCGGCAGGAGATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019792_1

>merge|NZ_AP019792|1|1195947-1196024|CRISPRCasFinder
ATCCAAAGCCTGCGGCAGGAGATGAAGGCGGAGACCACCGAGCTGCGCGGGGAAATCCAAAGCCTGCGGCAGGAGATG

>NZ_AP019792|1|1|1195947-1196024|CRISPRCasFinder
ATCCAAAGCCTGCGGCAGGAGATG	AAGGCGGAGACCACCGAGCTGCGCGGGGAA
ATCCAAAGCCTGCGGCAGGAGATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019792.1\|WP_143585821.1\|1190972_1191443_+\|type-II-transport-protein-GspH	unknown	unknown	gnl\|CDD\|378793
NZ_AP019792.1\|WP_143585843.1\|1200414_1200972_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_AP019792.1\|WP_143585847.1\|1201643_1202657_-\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|234866
NZ_AP019792.1\|WP_143585831.1\|1195155_1195506_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|225076
NZ_AP019792.1\|WP_143584933.1\|1197625_1198726_+\|transposase	unknown	unknown	gnl\|CDD\|379252
NZ_AP019792.1\|WP_143585845.1\|1200990_1201647_-\|chromosome-segregation-protein-ScpA	unknown	unknown	gnl\|CDD\|224273
NZ_AP019792.1\|WP_143585858.1\|1204413_1205019_+\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
NZ_AP019792.1\|WP_143585837.1\|1196774_1197548_-\|IS982-family-transposase	unknown	unknown	gnl\|CDD\|372648
NZ_AP019792.1\|WP_143585839.1\|1198785_1200006_+\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_AP019792.1\|WP_143585835.1\|1196210_1196753_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_AP019792.1\|WP_011173279.1\|1186463_1187477_-\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NZ_AP019792.1\|WP_143585849.1\|1202981_1204400_+\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
NZ_AP019792.1\|WP_018461695.1\|1189826_1190807_-\|YpdA-family-putative-bacillithiol-disulfide-reductase	unknown	unknown	gnl\|CDD\|188533
NZ_AP019792.1\|WP_143585825.1\|1191968_1192550_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|225076
NZ_AP019792.1\|WP_143585829.1\|1193258_1194935_+\|competence-protein-ComZ	unknown	unknown	gnl\|CDD\|379567
NZ_AP019792.1\|WP_143585827.1\|1192546_1193248_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|227132
NZ_AP019792.1\|WP_143585820.1\|1187982_1189671_-\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|272915
NZ_AP019792.1\|WP_143585823.1\|1191498_1191972_+\|type-II-transport-protein-GspH	unknown	unknown	gnl\|CDD\|378793
NZ_AP019792.1\|WP_143585841.1\|1200154_1200316_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019792.1\|WP_011173280.1\|1187473_1187986_-\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365

Protein	Function_ID	Function_description	E-value
NZ_AP019792.1\|WP_143585821.1\|1190972_1191443_+\|type-II-transport-protein-GspH	gnl\|CDD\|378793	pfam12019, GspH, Type II transport protein GspH. GspH is involved in bacterial type II export systems. Like all pilins, GspH has an N-terminus alpha helix. This helix is followed by nine beta strands forming two beta sheets, one of five antiparallel strands and one of four antiparallel strands. GspH is a minor pseudopilin; it is expressed much less than other pseudopilins in the type II secretion pilus (major pilins). The function and localization of minor pseudo-pilins are still to be fully unraveled. It has been suggested that some minor pseudopilins may assemble either into the base or the tip of pili, or both. They function as initiators or regulators of pilus biogenesis and dynamics, and/or as adaptors between various pseudopilin component and other members of the T2SS.	1.57158e-11
NZ_AP019792.1\|WP_143585843.1\|1200414_1200972_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	5.01264e-33
NZ_AP019792.1\|WP_143585847.1\|1201643_1202657_-\|tryptophan--tRNA-ligase	gnl\|CDD\|234866	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed.	0
NZ_AP019792.1\|WP_143585831.1\|1195155_1195506_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	2.05065e-10
NZ_AP019792.1\|WP_143584933.1\|1197625_1198726_+\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	0.000249336
NZ_AP019792.1\|WP_143585845.1\|1200990_1201647_-\|chromosome-segregation-protein-ScpA	gnl\|CDD\|224273	COG1354, scpA, Rec8/ScpA/Scc1-like protein (kleisin family) [Replication, recombination, and repair].	6.21658e-12
NZ_AP019792.1\|WP_143585858.1\|1204413_1205019_+\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	8.06048e-97
NZ_AP019792.1\|WP_143585837.1\|1196774_1197548_-\|IS982-family-transposase	gnl\|CDD\|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	5.83159e-11
NZ_AP019792.1\|WP_143585839.1\|1198785_1200006_+\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	1.48788e-89
NZ_AP019792.1\|WP_143585835.1\|1196210_1196753_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.83529e-33
NZ_AP019792.1\|WP_011173279.1\|1186463_1187477_-\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NZ_AP019792.1\|WP_018461695.1\|1189826_1190807_-\|YpdA-family-putative-bacillithiol-disulfide-reductase	gnl\|CDD\|188533	TIGR04018, thioredoxin_reductase, putative bacillithiol system oxidoreductase, YpdA family. Members of this protein family, including YpdA from Bacillus subtilis, are apparent oxidoreductases present only in species with an active bacillithiol system. They have been suggested actually to be thiol disulfide oxidoreductases (TDOR), although the evidence is incomplete. [Unknown function, Enzymes of unknown specificity].	1.29007e-169
NZ_AP019792.1\|WP_143585825.1\|1191968_1192550_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	1.22944e-05
NZ_AP019792.1\|WP_143585829.1\|1193258_1194935_+\|competence-protein-ComZ	gnl\|CDD\|379567	pfam14341, PilX_N, PilX N-terminal. This domain is found at the N-terminus of the PilX prepilin-like proteins which are involved in type 4 fimbrial biogenesis.	5.19287e-05
NZ_AP019792.1\|WP_143585827.1\|1192546_1193248_+\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|227132	COG4795, PulJ, Type II secretory pathway, component PulJ [Intracellular trafficking and secretion].	4.65134e-11
NZ_AP019792.1\|WP_143585820.1\|1187982_1189671_-\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|272915	TIGR00118, Probable_acetolactate_synthase_large_subunit, acetolactate synthase, large subunit, biosynthetic type. Two groups of proteins form acetolactate from two molecules of pyruvate. The type of acetolactate synthase described in this model also catalyzes the formation of acetohydroxybutyrate from pyruvate and 2-oxobutyrate, an early step in the branched chain amino acid biosynthesis; it is therefore also termed acetohydroxyacid synthase. In bacteria, this catalytic chain is associated with a smaller regulatory chain in an alpha2/beta2 heterotetramer. Acetolactate synthase is a thiamine pyrophosphate enzyme. In this type, FAD and Mg++ are also found. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed. [Amino acid biosynthesis, Pyruvate family].	0
NZ_AP019792.1\|WP_143585823.1\|1191498_1191972_+\|type-II-transport-protein-GspH	gnl\|CDD\|378793	pfam12019, GspH, Type II transport protein GspH. GspH is involved in bacterial type II export systems. Like all pilins, GspH has an N-terminus alpha helix. This helix is followed by nine beta strands forming two beta sheets, one of five antiparallel strands and one of four antiparallel strands. GspH is a minor pseudopilin; it is expressed much less than other pseudopilins in the type II secretion pilus (major pilins). The function and localization of minor pseudo-pilins are still to be fully unraveled. It has been suggested that some minor pseudopilins may assemble either into the base or the tip of pili, or both. They function as initiators or regulators of pilus biogenesis and dynamics, and/or as adaptors between various pseudopilin component and other members of the T2SS.	3.0681e-13
NZ_AP019792.1\|WP_143585849.1\|1202981_1204400_+\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NZ_AP019792.1\|WP_011173280.1\|1187473_1187986_-\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	2.64604e-85

>NZ_AP019792.1|WP_143585831.1|1195155_1195506_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MRNAKGFTLIELLIVIAIIAILAAVLIPNVLNARKRATDSAAQAFGRQVITWLAAADTAGVDVTEVTSCTDELLQAEGAPAELPNGVAGCSIEYDGAGQWTVTVTSDAGNTFTFTY
>NZ_AP019792.1|WP_143585829.1|1193258_1194935_+|competence-protein-ComZ
MNRKGIALVATLALMVVIALLVFGTFFTTQIELWTTRNDTTSVQAFYAAEAGLQKYKAALFQQYVWREQQGGTGGGSGCFTSLARGLDLDRDGTLTPFVNNRLVLAQDEVVTDANGNPVGRYTVTLYKDAEDGQLFTLVSEGTSGGAKARVQATFRISNSDYLEQAIFAGAGQANRWLNGGATIRGGVYVVGSPNDPDQYVIEANGNFALYNWYDLTTYSEVTNRVEPSYRQVQDLCASLRVQYGKISVGGSTQIGEPNNKVKGVFVGRGAQDITGENVGVCQNNKGVCTEAMGGFDLSDPPPFPTLDAKLDSEACKGYSTWRACLQGKAALRIQRIGNVLSVASPSDATLPSPCLQAMESGTLTLDTQSVDCTFTRLDGSQGGFRYTYTGDKKSGQGLLEVFGDVVLEGIDVVLNRPVDYRAQSGSTKSATLAVLKLNGNGGNLDINGNLLPDATFGLFPNHALGFLAEGDIYQRGQYVMAPLYAGGTFRVVKDNVLFGSVISNQFCTTSAGNQTQCNAGQKAEVVYIRIPKENRPVLLPSLRGGKPVFQVLSYERR
>NZ_AP019792.1|WP_143585827.1|1192546_1193248_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MKRGFTLVEVLVAMAILVVVLAVGVRYFASTSELARNTQARSELQDRVRMVMQVVTADLQMAGARYWNSGDQNQAFSLPLPPLSGSDGGPKDTLTLYYVTSLRDLASACRRVDYGFEGDTLRRSDVSATPTSGSDCTTPSPNYQPLAEGILALDIQYQCSDSTTRNTPDCGANAYPRSAKVTVAGYSLTPVTNPGPASLTTVTGKTLACPQGRACYALTQEVLMPNLKPLPTP
>NZ_AP019792.1|WP_143585825.1|1191968_1192550_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MRKGLTFVEVLIALAVLGIAFGALLMSQVSNLRANAQARFATDAKAAAVQVLERRSAEVLKSEIVSALSPYKDAPLDPNNPSGDWRSFYFVDYYFSCPTPVAPSPKQRGGLVANLRPGLPCSGTETVADIPVAWSIRGESGILGEGVVTVVVTATHPRGPKVTMGRRVTCYDVYPSPTQDQPAPCPPPGGGRP
>NZ_AP019792.1|WP_143585823.1|1191498_1191972_+|type-II-transport-protein-GspH
MKKPHGLSLVELVIVLAVLGVLLALGTGYLRSDRLAVNQAARSLAAQVTRARLEAIRRNAFVGIQFLTGGAGGYVVFVDQNRNGTYDAGDTPIQTVNFGQGDWAQVRLTALTGPVALVFDPRGIPQDFTGATVTLSNRAGTYTKGVSLSPQGRTSLP
>NZ_AP019792.1|WP_143585821.1|1190972_1191443_+|type-II-transport-protein-GspH
MTRRGLTLLELLLVLGLLGVLLGLALPLLSPNRLALDQAARSLAAQVTRARLEAIRRNAFVGLQVFTEEAGGYLLFVDQNANRRYDPGEEFGAVRFGQGEWARVRLDPERSTLGNMPLLFDPRGIPAKPITATLVLTSGSATRKVVISQQGRARVE
>NZ_AP019792.1|WP_018461695.1|1189826_1190807_-|YpdA-family-putative-bacillithiol-disulfide-reductase
MVDVLVVGAGPVGLCAALWAKRLGLSHLVLERGTVAETVYRFPRDMVFFSEAKNIEIGGHPLVAQGPKPTRKEALLYYQRVAEREGLSVLTYTEVLGIRGREGAFQVLAKDRKGERAFSARYVVVATGYFGNPNRLGVPGEDLPHVLHRYEEAAPFFGREVAVVGGSNSAVEAALDLYRGGAKVTLVHRGKWVRPSVKYWLLPDFENRVKEGSIRAVMEARVEAITPEGLWLRRPEGREFLPADFVLVLIGYRAEDRLLREAGVAYEGERPWLSSEWETSIPGLFAVGSCAYGPDTRSVFIENGREHARVALTAIAARVRGLTPRP
>NZ_AP019792.1|WP_143585820.1|1187982_1189671_-|biosynthetic-type-acetolactate-synthase-large-subunit
MKGAEALLRALEREGVEVIFGHPGGAIMPTYDALYDSPIRHILVRHEQGGVHAATAYARASGRVGVVMATSGPGALNLVTGLADAMMDSTPVVAITGNVPRALIGTDAFQEADVTGVTMPITKHNYLVQDVNEIPRVVKEAFHIAATGRPGPVLIDIPKDVQLAEFTGSFDVKLDLPGYKPTLKGHPKQIERALDALEKAERPVLMVGGGAQHAHAELLAFAEKTGLPVITTLMGLGAFPGNHPLWLGMPGMHGTVAANRAIHHADVILAIGLRFDDRVTGKVSRFAPHAHTIIHVDIDPAEIGKVVRTHIPIVGDSRLVLKELLKGAKALRLAAWWRELEEWRTRYPLRYKPKPHLQSQEVIRAFHEATGGHAIVTTGVGQHQMFAAQFFPVTRPRSFLTSGGLGTMGVGLPFAIGAKIARPEELVIDFDGDGSFQMTLQELATVVKYKLDVKVVILNNGYLGMVRQWQDLFHAKRYSEVYLADSNPDFARLAEAYGIKGVRVERKEDLMKGVEAVLNADGPVVAEFKVYHEEGVFPMIPAGGAAEDMILEPPEEKEEVGA
>NZ_AP019792.1|WP_011173280.1|1187473_1187986_-|acetolactate-synthase-small-subunit
MRHVISVLVQDHPRVLNRITGLFARRGFNLESLAVGTTHQPGLSRICLVVSGDDRTLEQVEKQLNRLIEVLKVTDHTEPHVERELCLVKVHVAGLEERLAVKDIQEAFRARVVDVAQKSLILELTGDTQKVNSFIEALRPYGILEVMRTGAVAMSRGDRVLKVREKKEAV
>NZ_AP019792.1|WP_011173279.1|1186463_1187477_-|ketol-acid-reductoisomerase
MKIYYEHDADLGFILGKKVAVLGFGSQGHAHALNLKDSGVDVRVGLRKGSRSWEKAEAAGLRVLPVAEAVREADVVMVLLPDEKQAQVYREEVEPNLKEGGALAFAHGFNVHFGQIKPRKDLDVWMVAPKGPGHLVRSEYQKGSGVPALVAVHQDASGSAFPTALAYAKAIGAARAGVIATTFKDETETDLFGEQAVLCGGLTRLIRAGFETLVEAGYPPEMAYFETVHEVKLIVDLIYEAGLKGMRYSISNTAEYGDYTRGDLAVPLEETKRRMREILRQIQSGEFAREWMLENQVGSPVLEANRKRWAAHPIEEVGSRLRAMMPFLKARVMEEVG
>NZ_AP019792.1|WP_143585835.1|1196210_1196753_+|Uma2-family-endonuclease
MGAAKQVRPLTLEEYLALEREAPVKHELVEGFPHAMAGASDRHNRVVVNLVLALGPLARKRGCRLYASDMRLKVDAATVYYPDLMVVCEEDPGEYYKEKPCLVIEVLSDSTEATDRREKLRKYLGLPTLQAYLLLDSRTPRAFGYYREGEGWVYREAEAGTLPLPCLGGHLDLAEAYHGL
>NZ_AP019792.1|WP_143585837.1|1196774_1197548_-|IS982-family-transposase
MQVLSQAKTPASAILTLALLAALEFGGKHNKALALAKDLGLFTHVPSPSRFNRRLHALYPLLLPLLHLLAQVWKHLHQAQAYALDTFPLPACENIRAPRSRLFPDKAYRGFIPSKRVYFHGLKLHLLVDDGKFVHEVNLTPGSFHDLASLLLLPLDLPEGAELYLDRGYESHLYEDLLREAQGVVPMVIRRRNSRRYLPWMQYLAIVGRRVVETVGSMLHHLFPRRIHAVTQEGFVIKVLTFVLAHNISLLTQKMAG
>NZ_AP019792.1|WP_143584933.1|1197625_1198726_+|transposase
MNQAALSLLWTILALMPTPHLRESLKALLFLFLTGHGKARPQHSKTKSPSALSRFLNRYPWPTRALIRLAREEAQKALDRARRRKGPKPRLLVVLDLVTLEKRGRFPALPLSFFHGKWGLHLVVLYLVYGDLRVPWAYRLWRGKGEKGLSLLALSLLASLPLWMRRTFRIRVAADAAFGTAWFLFGVRRLGLETVVGMRRDRRLRGGGRLLDLRRQGSRVYLWGLSFPVWVAWYRYPLPQGGWEWRYVVATFPATPRTMLTWGRRRFTVEHFFRAAKSEFSLGQFGQRTALGVHRFLVLSLLAYLLAHWVGVEGKGSWREAREGAARVLLPELVVQVILRELHALGLGPPGGGGEGLCGVCGRCKF
>NZ_AP019792.1|WP_143585839.1|1198785_1200006_+|IS256-family-transposase
MFNRGAHLSTRRCPVDQDTLRILLREAVRETVAEVLQTVLELDRTAFLQVHGGRRNGYYPRKLETTFGQVDLKVPRDRESRYYPAFLKPYARRLVDVGEVAVALYAAGVSQRKAAEILSLLLGHRYSHETLSALTDQVLEAAGAFRTRPLPEEMAFVYLDGLSLKVFREGEGIVRESVYVALGIAPNGERRVLGFWLLPTESALGWEGVLGELWQRGLRRVLLFITDGLPGLPEAIRRVYPQAEWQRCVVHGVRWSLSQVRARDRGLLAEDLRRVYGAESREEALGALEEVKAAWGSRYPGVVGLWVQDSGAFLRFYGYPKVLWPYLRSTNLMERFIREVRRGTKVRDHKFPKEEAVYKLLYLESERQERRWAERKLKGFSEVKEVLEKMLQERYAPRTQTLTHNS
>NZ_AP019792.1|WP_143585841.1|1200154_1200316_+|hypothetical-protein
MPEALQKEVADFARFLLEKRLGEELLWQSLSLAQAVRGLPEEDYTEAYLKERW
>NZ_AP019792.1|WP_143585843.1|1200414_1200972_-|Uma2-family-endonuclease
MGEAARPLELLDAEAYLALEERSPVRHELVEGVPYAMAGASLSHNRIVGNLYALLRPSALARGCRIYTETVKLRVSARTFYYPDLMVVCQGVPPHTHYEEAPCLVVEVVSEATEAIDRREKLWRYREIPSLQAYLLVDSRERRVEGYFRRGEGWLYRLWEGEGEVEVPCLEARFPLALIYEGVGI
>NZ_AP019792.1|WP_143585845.1|1200990_1201647_-|chromosome-segregation-protein-ScpA
MIRIAFPGFEGTPEALREALRRGRLSPKEVPVLAVVEQALAQVPEDLRTKSELLPLLAELLVLKLSPERALLPKEEGEEAPLVQVLVDLSEMVAFLEARLERRARLLPVAPPPLPRPALRLSPKSLAEAAKGFRRAVLRLPREAFGVREAWERLKGAIRGRVAFQSLPLATWGEKAVGFAALLEACRLGRVRLFQEAPFAPLYVEPVGLLEGDLERTA
>NZ_AP019792.1|WP_143585847.1|1201643_1202657_-|tryptophan--tRNA-ligase
MKRVLSGIQPSGEIHIGNYLGAIKQWVAIGEKLGRDAFFCIVDYHALTNPLAYDPSTLAQRTFEAALVNIAAGLDPEKVTLFVQSHVPEHTELSWVFTTLTPLGDLTRMTQFKDKASKQETVWSGLLMYPVLQAADILIYKADTVPVGEDQVQHIELAREIARRFNHLFGETFPEPQALLNPEAPRVPGIDGKAKMSKSLGNTIGLLEPEESIWQKIQHLPDDPQRIRLSDPGDPERTIVFTYLSYFAPKDLVEALKEEYRKAGVGTYVVKRILFDHLMEALRPIRERAEALKKDPDYVMDALLEGAKRARAVAQATMEEVREKVGLLLPKKRPVLR
>NZ_AP019792.1|WP_143585849.1|1202981_1204400_+|3-isopropylmalate-dehydratase-large-subunit
MGKTLYDKVWEAHEVRKLRNGQSQLFIDLHLLHEVTSPQAFGMLKDLGLRVRYPHRTFATVDHIVPTHDRTEPFQDPLAQSMLEALRANTREHGITFFDLGSGNQGIVHVIGPQLGLTQPGMTIACGDSHTSTHGAFGAVAFGIGTSQVRDVLATQTLAAQKLKVRRINVEGRLAPGVYAKDVILHIIRHLGVKGGLGYAYEYGGSAVEAMDMESRMTLCNMSIEGGARIGYVNPDETTFRYLEGRPYVPKGSEWEEAKKRWLAWRSDPDASYDDVVTFRAEEIAPTVTWGITPGQAIPIDGRIPLLEELPEEERPVAEEALAYMGFRPGQPIKGVPIQVAFIGSCTNARLSDLREVARYLKGHKVKKGVRALVVPGSEWVARKAEEEGIAEVFREAGFEWRMPGCSMCLAMNPDRLEGDELCASSSNRNYKGRMGSPRGRTVLMSPLMVAAAAVAGEIADAREVFGLAGVR
>NZ_AP019792.1|WP_143585858.1|1204413_1205019_+|3-isopropylmalate-dehydratase-small-subunit
MLEKFTVIRGKAVPLRGEDIDTDRIIPARFMKVLTFEGLGQYLFYDERFDEKGNPKPHPLNDPRYRGATILLVESGFGSGSSREHAPQAIKRAGFKAIIGESFAEIFFGNATAIGLPCVTLAPEDLGVLFRSVEENPELEVEIDLVNKEVRFGDRTAPLSIREEAREALVEGLWDPIGELLEAGELLDQFDRKLPYPRRTE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP019792_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019792_2

1754932-1755022

Orphan

Consensus_repeat	Method
TCCTAAAGGGGGGTAAAGGGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019792_2

>merge|NZ_AP019792|2|1754932-1755022|CRISPRCasFinder
TCCTAAAGGGGGGTTGAGCCGCAGATTTTACCCCCCTTTAGAACTTGCGTCCTGGACGGGAAAAGTCCTCCTAAAGGGGGGTAAAGGGGGG

>NZ_AP019792|2|2|1754932-1755022|CRISPRCasFinder
TCCTAAAGGGGGGTTGAGCCGCA	GATTTTACCCCCCTTTAGAACTTGCGTCCTGGACGGGAAAAGTCC
TCCTAAAGGGGGGTAAAGGGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019792.1\|WP_093007989.1\|1749804_1750086_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_AP019792.1\|WP_008633583.1\|1747433_1747661_-\|preprotein-translocase-subunit-SecG	unknown	unknown	gnl\|CDD\|235881
NZ_AP019792.1\|WP_143586657.1\|1764816_1765416_-\|TRIC-cation-channel-family-protein	unknown	unknown	gnl\|CDD\|225415
NZ_AP019792.1\|WP_143586648.1\|1758586_1761463_+\|RtcB-family-protein	unknown	unknown	gnl\|CDD\|376465
NZ_AP019792.1\|WP_143586643.1\|1750491_1750983_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019792.1\|WP_143586650.1\|1761597_1763061_+\|phosphodiester-glycosidase-family-protein	unknown	unknown	gnl\|CDD\|378342
NZ_AP019792.1\|WP_018460830.1\|1753188_1754670_+\|DUF3987-domain-containing-protein	unknown	unknown	gnl\|CDD\|379041
NZ_AP019792.1\|WP_143586646.1\|1752335_1753202_+\|toprim-domain-containing-protein	unknown	unknown	gnl\|CDD\|372578
NZ_AP019792.1\|WP_143586655.1\|1764333_1764807_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_AP019792.1\|WP_143586034.1\|1751098_1752319_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_AP019792.1\|WP_011228919.1\|1765408_1765867_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|376811
NZ_AP019792.1\|WP_018460827.1\|1755506_1755953_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350222
NZ_AP019792.1\|WP_011173813.1\|1763975_1764305_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238315
NZ_AP019792.1\|WP_038036786.1\|1756407_1758276_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|336785
NZ_AP019792.1\|WP_018460833.1\|1750095_1750377_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019792.1\|WP_143586998.1\|1749563_1749818_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_AP019792.1\|WP_126186914.1\|1747880_1749068_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_AP019792.1\|WP_018460826.1\|1755949_1756099_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019792.1\|WP_143586653.1\|1763077_1763998_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_AP019792.1\|WP_126186909.1\|1749079_1749460_-\|CopG-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|279710

Protein	Function_ID	Function_description	E-value
NZ_AP019792.1\|WP_093007989.1\|1749804_1750086_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.08721e-08
NZ_AP019792.1\|WP_008633583.1\|1747433_1747661_-\|preprotein-translocase-subunit-SecG	gnl\|CDD\|235881	PRK06870, secG, preprotein translocase subunit SecG; Reviewed.	3.44427e-09
NZ_AP019792.1\|WP_143586657.1\|1764816_1765416_-\|TRIC-cation-channel-family-protein	gnl\|CDD\|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	1.29452e-48
NZ_AP019792.1\|WP_143586648.1\|1758586_1761463_+\|RtcB-family-protein	gnl\|CDD\|376465	pfam01139, RtcB, tRNA-splicing ligase RtcB. This family of RNA ligases (EC:6.5.1.3) join 2',3'-cyclic phosphate and 5'-OH ends. They catalyze the splicing of tRNA and may also participate in tRNA repair and recovery from stress-induced RNA damage.	0
NZ_AP019792.1\|WP_143586650.1\|1761597_1763061_+\|phosphodiester-glycosidase-family-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	3.43405e-19
NZ_AP019792.1\|WP_018460830.1\|1753188_1754670_+\|DUF3987-domain-containing-protein	gnl\|CDD\|379041	pfam13148, DUF3987, Protein of unknown function (DUF3987). A family of uncharacterized proteins found by clustering human gut metagenomic sequences.	1.78175e-67
NZ_AP019792.1\|WP_143586655.1\|1764333_1764807_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	1.23269e-84
NZ_AP019792.1\|WP_143586034.1\|1751098_1752319_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	1.09012e-89
NZ_AP019792.1\|WP_011228919.1\|1765408_1765867_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|376811	pfam02542, YgbB, YgbB family. The ygbB protein is a putative enzyme of deoxy-xylulose pathway (terpenoid biosynthesis).	1.81298e-68
NZ_AP019792.1\|WP_018460827.1\|1755506_1755953_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350222	cd09874, PIN_MT3492-like, VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis CDC1551, hypothetical protein MT3492, and similar bacterial and archaeal proteins are included in this subfamily. They are PIN domain homologs of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.66483e-25
NZ_AP019792.1\|WP_011173813.1\|1763975_1764305_-\|hypothetical-protein	gnl\|CDD\|238315	cd00562, NifX_NifB, This CD represents a family of iron-molybdenum cluster-binding proteins that includes NifB, NifX, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme. This domain is a predicted small-molecule-binding domain (SMBD) with an alpha/beta fold that is present either as a stand-alone domain (e.g. NifX and NifY) or fused to another conserved domain (e.g. NifB) however, its function is still undetermined.The SCOP database suggests that this domain is most similar to structures within the ribonuclease H superfamily. This conserved domain is represented in two of the three major divisions of life (bacteria and archaea).	6.36441e-07
NZ_AP019792.1\|WP_038036786.1\|1756407_1758276_+\|AAA-family-ATPase	gnl\|CDD\|336785	pfam07728, AAA_5, AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.	5.39651e-08
NZ_AP019792.1\|WP_143586646.1\|1752335_1753202_+\|toprim-domain-containing-protein	gnl\|CDD\|372578	pfam13362, Toprim_3, Toprim domain. The toprim domain is found in a wide variety of enzymes involved in nucleic acid manipulation.	4.62447e-11
NZ_AP019792.1\|WP_143586998.1\|1749563_1749818_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	5.72106e-10
NZ_AP019792.1\|WP_126186914.1\|1747880_1749068_-\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	4.62973e-49
NZ_AP019792.1\|WP_143586653.1\|1763077_1763998_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	0.000554209
NZ_AP019792.1\|WP_126186909.1\|1749079_1749460_-\|CopG-family-transcriptional-regulator	gnl\|CDD\|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	0.000111991

>NZ_AP019792.1|WP_018460830.1|1753188_1754670_+|DUF3987-domain-containing-protein
MVKANFLADLERLKKPIPFSPEGLPEPAPLEELGEEELPPFPGEILPGELEAFLRPFAERLAVEYGAVAITALGLASGLLAGRYVVQPDPQNPTWREGVNLWVAVISDPGTKKTPILKTLAEPLYELEAHFQEEYEERRRTYELERQAWQASKPQERGPEPQEPRAFRVLVEDATKEALAQVLKENRGVVAVYDELKGLFSTWQRVDRQADRAFYLKAHSGGSHREDRMGRKGHFVRDMWLAIVGFIQPGPFRRLLKEAAKGGEEADGLVQRFVMVEGRLLPWKKERPSVPREAQEAYKAFMKGLWQSPEGAPRILRFAPDAQELWYEWEDEVEQEARDPDLPPSWKAYLGKRLLLTARFAGVLSLVWKEGEWVSAESLLRAIELVQWADAHAKRIWRGATRGDYSPANRVAVRILERAREGKLPEQITPKWVWDLGFAGIESVAQAAKVLQRLAEKGWLLEVQPRNRNRGGKAFVLNPKVLEGLKPEELQGA
>NZ_AP019792.1|WP_143586646.1|1752335_1753202_+|toprim-domain-containing-protein
MLTRPSIRLTFDGRVLLHCFAGCPIEAVLAALGLEFRDLFDGVRRGAFEAWPPPPYRGEAKPDEKRRKALQRLWGEAIPLEGKGAELGRRYLEARGLNLEAVLPGLQNLRFHPSLEYREGGKVLGVLPALLARVEHPQHGLVALHRTYLSPDGRGKAQVPSPKKLTKAVFEGATKGAAIRLYPLEGEALALAEGIETALAVREAGLLPVWATVSANGLEWVELPQEVRSVLIAADHDPRGLEAAHNLAGRLFLGGVRVSVLAPSWEGKDWLDVLKGAKAEGGRVHGQG
>NZ_AP019792.1|WP_143586034.1|1751098_1752319_-|IS256-family-transposase
MFNRGAHLSTRRCPVDQDTLRILLREAVRETVAEVLQTVLELDRTAFLQVHGGRRNGYYPRKLETTFGQVDLKVPRDRESRYYPAFLKPYARRLVDVGEVAVALYAAGVSQRKAAEILSLLLGHRYSHETLSALTDQVLEAAGAFRTRPLPEEMAFVYLDGLSLKVFREGEGIVRESVYVALGIAPNGERRVLGFWLLPTESALGWEGVLGELWQRGLRRVLLFITDGLPGLPEAIRRVYPQAEWQRCVVHGVRWSLSQVRARDRGLLAEDLRRVYGAESREEALGALEEVKAAWGSRYPGVVGLWVQDSGAFLRFYGYPKVLWPYLRSTNLMERFIREVRRGTKVRDHKFPKEEAVYKLLYLESERQEGRWAERKLKGFSEVKEVLEKMLQERYAPRTQTLTHNS
>NZ_AP019792.1|WP_143586643.1|1750491_1750983_+|hypothetical-protein
MEGVEVGPHLSPAWWEGLKELLEALEALGVRVCPVVQYRDPEEGFREVDLEGLLRKVASVGEGVYGESREASMPPLEGQNPVWKGNPRGEVAGLSLNTLPPLAGGGGGRKPPQVSVGALGEGKPDDFFLLLGTLLYGLTSLWEVWRSRKARGRAVAHEEEAWA
>NZ_AP019792.1|WP_018460833.1|1750095_1750377_+|hypothetical-protein
MVKVKEAVVQEEGRVLEQVVVELGWARLPELLAFVEELKAKVKELGASVLEASFEMQAVVEGTSPDLVQELKAWAKELADPLGRSLGVSVRRG
>NZ_AP019792.1|WP_093007989.1|1749804_1750086_+|helix-turn-helix-domain-containing-protein
MPGVEEPGRGRAFKRLLSVPEAAERLGLPVNAVYQFCRAKPEHPLFMPHIRLGKRVYIPPEALELWVQKNTVGLSEVSGEEAFWRQEGEALEE
>NZ_AP019792.1|WP_143586998.1|1749563_1749818_+|helix-turn-helix-domain-containing-protein
MKKGELSRKRLREKTLQKGVKAIALSPEEFAGAIGVSLSTVYRLIRTKRIPSARLGKRILIPLSAVEEFLNGEREEEEVAHARR
>NZ_AP019792.1|WP_126186909.1|1749079_1749460_-|CopG-family-transcriptional-regulator
MPRTKPGKPKAPLLSVYMDQEMQALIKAEAQKRGIAVSELVRQAVSLYLTGQISWQEWANNPEEFIKRSQGGENPPETWEDFYKQSTFLFLAASKLVETWRQRLILKAKAEAGGKTLEEYMKENLW
>NZ_AP019792.1|WP_126186914.1|1747880_1749068_-|site-specific-integrase
MKRKRAKGEGHIRKRKDGRWEGILTVGTWPDGRQKTRSVYGKTKQEVAEKLAELRVSLQRGTYVDPSLLTLAEWAKTWLERKAQEVKPKTVQVYLEDLSLVMPELRGKGRGLGSLKLQAVKPSHIQGAMDFLVKEGFSPRTTLKVYQLLRALFDEAVRLELIARNPVSLVRPPRKAQGREAPPEKPGRALEPHEVEALLQAAEGHPLELFFRLLLGLGLRKGEALGLKWGDIDFEKGELRVQRAWGKVGSGGEISTPKTPKSRRTLPLPLDLFQALKSRYEELAQKLPPEALKEAWVFPGEGGKTPVHPDYPNHALRRICQQAGIRPCRVHDLRHTWGSLMLARGVPLEVVSERLGHASFDITLRVYRHVLEEERRSYVLDLQTLLKGHGGYPQA
>NZ_AP019792.1|WP_008633583.1|1747433_1747661_-|preprotein-translocase-subunit-SecG
MDLLYTLVILFYLGVAGLLVYLVLVQEPKQGAGDLMGGSADLFSARGVTGGLYRLTVILGVVFAALALVIGLWPR
>NZ_AP019792.1|WP_018460827.1|1755506_1755953_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MRLFLETSGLLKVLLREDLSDLAREAFSQAQAHAASAFALPEAVGVLHAMQRDGRLTRPLYRKALRELYELWEYLEVLTPTLEGHMRAARLCERHPLKGADAVHLEGALFLRGLYPDTALLTFDRTLYRAAKKEGLTVVRVPPLEGRG
>NZ_AP019792.1|WP_018460826.1|1755949_1756099_-|hypothetical-protein
MPRSTRPKPKEEAPFLITPPRKKGKPPLPEPVVPKPGKPSLAYLQEQRR
>NZ_AP019792.1|WP_038036786.1|1756407_1758276_+|AAA-family-ATPase
MELTEWQKRVLGYLAQAGEARLSEVARALGAGEAGLKDLLTRLKARGLVESTARRTWRPTGQGLLALKGVPSRPSSLAAHPGFASLLALLPVPEYRALLRLTVAVAYLRRKAPHLGPMPWLGAYGPPGTGKSTVGEAALALVGGRFFDVRAMTPGEALGRRRQTQGGGWEVEPPATLEGPITVLDELGEAQAELQRALFALVNDRPTVLIEGQELPHRAAIYATWNPEAREVPLPEGAKRRGLLLNTAPYVRTLHKAFLREGVGERLRELLDTYPSPWVDLEALPSPNLEGVDPGPLREALYRLLTPKGKGEVPLGALRPLAVAYNTLYFPEKEASLVEVAYDMALLLASRPGLLLPGWAKALQGLRGGLPLEEPTPQEGSKDYRARMEEWGRRKRLEAALARLTRELHRYRSLTREEEVARAELLGKVEALREELGKEASPAPLEALEEDGKALLRAMEELLERIRHRLEVERKRLLEEAKSLKAQALEAYNLAQKLKALAYRNPEEGMRLLEERGMVQRVAVAALPAPKEKPPEERVMQGFSVALGLLLGLSGRREGWSLALEAALPKAPPSLAPVWTFQGQEVKDLARFLWEMANRLEGWARQNSSKAQSLREKVRGLA
>NZ_AP019792.1|WP_143586648.1|1758586_1761463_+|RtcB-family-protein
MFFEKIAPYTYRIPRQGKMRVDAVFFASKEILKDLEAENYASLQQLMNVATLPGIVEPALAMPDIHWGYGFPIGGVAAFDPEEGGVVSPGGVGFDINCLPPGTRILFRDGYTRPIEELAEERAPNLVVWRLGERPEAAQAALLLSREAEELLRLRTEGGFVLEATPDHPLYTPEGMRPAGTLGPGDRVAVHPFRGLPYEPPPPLSLLEEEEAEAWAQTLGFPQAPRELRARGLLPLRADHPHLPAILRLLGYALGDGTLYRSGGRAYLVLYGEEEGLREAKADLERLGFRAGGPYLRRRNHAFRGRTFDAVEAGLKVSSRALFLLFRALGLPEGAKAKQGFRLPAWLFALPPWLKANFLAGLFGAELSAPKAVSGHGYNLIPPVLSQSKRRSFLEEGRAFMEDLARLVASLGLEVQDLREEADWEEPEDPSHRFKLILRSTPENLARLYEEVGYAYAPKKARLALLAALYLRLKQAHLARREAMAAEVLALREAGEKVAAIAHRLGVSRRFAERTLYEKRGAFRPQGFPTFPEFVAANPGMLFDRVVAVERVPYGGRVYDLSMAHPDHNFVAEGFVVSNCGVRLLASHLTLEDLLPRQKELADTLYRLVPSGVGSERRDVRFSKRELKEILKEGAGWLVKRGYGYPEDVRFIESQGRLPWANPDKVSERAFERGAPQIGTLGSGNHFLEVQYVDEIYDEEAAEAFGLFKGQITVLIHTGSRGLGHQVCQDYVERFLKAAPRYGIELVDKQLAAAPIKSPEGQDYLQAMAAAANFAFANRQLIAHFVREAFEKVGFTPRDHGLRVLYDLAHNNAKFEEHRGRRVLVHRKGATRAFGPGHPEVPEEYRRVGQPVLVPGDMGRYSYVLAGTEKAMEVSFGSSCHGAGRKMSRHQAKKVARERNLVKELAERGILVRAATRATVDEEMPEAYKDVSLVVEAVEGAGIGKKVARLRPLIVVKG
>NZ_AP019792.1|WP_143586650.1|1761597_1763061_+|phosphodiester-glycosidase-family-protein
MRRFALLLFFGLALGQTLLPVEQLGLTFREEGGAWVYQGGGKRFVYVPGVGWAEPLGAELPPPQEGLFPLEALKALGHFRVPEAGVRFGEKPKGLRVVLDLPAPYPAEPREERGKAGATLYLPYLAPDLLKAPWPKGLKAKIRLLPEATELALRAERGHLYYRLFPLEGPPRLVLDLYLLAPEVEEVLAPGVRYREVYGFTPEPLRLYLVEAERGRLLPVGTPGKRALPKDLAPGALAVLNGGYFDPKSGTPIGLWVQDGVTLSYPYGRVALLWDGFAFFLGFPQFVAEAVGPDGSRVRVGVNASRARYTAHTVPGLVGREGEGVALVREDRVVALLPAPAELPPGHWALTFPRDAPPFPLEVGGRLALYGTLNPPFRYALEGGPLLLKEGRYAYDPAKENFKDPRPLQAVAPQAAVAWTKEGKLWLLVSEPTTPGALARALLSLGAWNALRMDGGGSAQLWVKGQLRSPYTGSPRPVVNALALYLP
>NZ_AP019792.1|WP_143586653.1|1763077_1763998_+|hypothetical-protein
MGPGFHRLYAARLAWRYRLLLALALALLGVFHPLLALLSPLGLLLPARLWEGRALKEISRVSLAYATALAYGEERLWAEAGKVPARLPPFPWGLLLAYGLALLLALGLHLTRPIPLPGPAGVERVAPLSREGQAQDGAAGEKEAQGEAKGEGQAAPSQGKAQGPPSEAPGEGSPQAEGASPAQPEEGPPVRAFPRTRSPGEEAGPAEAPPREDGGGQEMPPPQASRRGPGAGGTLEEKEGALPPTQAQGLEVGLLGEGEEGEKAALPSPWPAGRPPEAVRRGVEVYLEKTPLPPEARELLRRYFAP
>NZ_AP019792.1|WP_011173813.1|1763975_1764305_-|hypothetical-protein
MRVAIALAKDDATRVYPGPFGHAPRYAIYEAGPSGELVLLEIRENPYAKAHGEEKHAKMRELLRDVDLKVGARFGHKGSLGAFPLADRVEVGPVSLEEALARLKERSSA
>NZ_AP019792.1|WP_143586655.1|1764333_1764807_-|cyclic-pyranopterin-monophosphate-synthase-MoaC
MDLTHFQDGRPRMVDVTEKPETFRTATAEAFVELTEEALSALEKGGVGKGDPLVVAQLAGILAAKKTADLIPLCHPLPLTGVEVRVELLKEEKRVRIEATVKTKAETGVEMEAMTACAVAALTIYDMLKAASKGLVISQVRLLHKAGGKSGEWRREQ
>NZ_AP019792.1|WP_143586657.1|1764816_1765416_-|TRIC-cation-channel-family-protein
MVEALVWLGTLVFAVTGALKGVEKGFDLLGVLVLAMVTAVGGGSIRDVLVGTLPPTTLRNEPLLWSVALAGLLVFRFHPRVQALGPLIYYLDTLGLGLFAALGAERGVEAGLGPFGVALAGALSGVGGGVLRDVLSGEVPVILYRAGDLYASAALLGAWVVYLAYPLGPGPALFLGAGTTVALRLFGRRLGLRLPTPRG
>NZ_AP019792.1|WP_011228919.1|1765408_1765867_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGYGEDSHRLEEGRPLYLCGLLIPSPVGALAHSDGDAALHALTDALLSAYGLGDIGLLFPDTDPRWRGERSEVFLREALRLVEARGAKLLQASLVLTLDRPKLGPHRKALVDSLSRLLRLPQDRIGLTFKTSEGLAPSHVQARAVVLLDG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP019792_1	1.1\|1195971\|30\|NZ_AP019792\|CRISPRCasFinder	1195971-1196000	30	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	175902-175931	7	0.767
NZ_AP019792_1	1.1\|1195971\|30\|NZ_AP019792\|CRISPRCasFinder	1195971-1196000	30	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1779053-1779082	8	0.733
NZ_AP019792_1	1.1\|1195971\|30\|NZ_AP019792\|CRISPRCasFinder	1195971-1196000	30	NC_013859	Azospirillum sp. B510 plasmid pAB510e, complete sequence	445404-445433	8	0.733

1. spacer 1.1|1195971|30|NZ_AP019792|CRISPRCasFinder matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.767

aaggcggagaccaccgagctgcgcggggaa	CRISPR spacer
gcggcggcgaccacggagctgcgcgggatc	Protospacer
. ***** ****** ************.

2. spacer 1.1|1195971|30|NZ_AP019792|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.733

aaggcggagaccaccgagctgcgcggggaa	CRISPR spacer
cgggctgagaccacagagctgcgcggcctc	Protospacer
 .*** ******** ***********

3. spacer 1.1|1195971|30|NZ_AP019792|CRISPRCasFinder matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 8, identity: 0.733

aaggcggagaccaccgagctgcgcggggaa	CRISPR spacer
ttggcggagaccaccgacctgcacggctgc	Protospacer
  *************** ****.***  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1424250 : 1462613

Staphylococcus_phage(33.33%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_143586177.1\|1424250_1425582_-\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_172619145.1\|1425632_1425800_+	hypothetical protein	NA	NA	NA	NA
WP_143586179.1\|1425796_1426555_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_143586181.1\|1426559_1427204_+	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	A0A1V0SIZ6	Klosneuvirus	7.5e-15	30.0
WP_008632957.1\|1427193_1428162_+	class II fructose-bisphosphatase	NA	NA	NA	NA
WP_143586184.1\|1428283_1429321_+	alanine dehydrogenase	NA	NA	NA	NA
WP_143586185.1\|1429317_1430652_+	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_143586187.1\|1430761_1431517_+	TatD family hydrolase	NA	NA	NA	NA
WP_143586189.1\|1431498_1432812_+	DNA-binding protein	NA	NA	NA	NA
WP_143586191.1\|1432798_1433098_+	hypothetical protein	NA	NA	NA	NA
WP_143586193.1\|1433214_1434483_+\|tRNA	aspartate--tRNA(Asn) ligase	A0A2I2L4Y8	Orpheovirus	6.1e-61	36.6
WP_143586196.1\|1434566_1435121_+\|protease	DJ-1/PfpI/YhbO family deglycase/protease	NA	NA	NA	NA
WP_143584933.1\|1435213_1436314_+\|transposase	transposase	NA	NA	NA	NA
WP_143586198.1\|1436371_1437070_-	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA
WP_014510641.1\|1437079_1438813_-	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA
WP_008632977.1\|1438814_1439210_-	succinate dehydrogenase hydrophobic membrane anchor subunit	NA	NA	NA	NA
WP_014629235.1\|1439199_1439565_-	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA
WP_172619231.1\|1439860_1440295_+	adenosylmethionine decarboxylase	A0A1D7SEZ2	Cyanophage	4.1e-09	38.6
WP_014629233.1\|1440382_1441528_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_143586202.1\|1441529_1442453_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	7.4e-32	32.9
WP_008632987.1\|1442442_1443399_+	ABC transporter permease	NA	NA	NA	NA
WP_011173512.1\|1443415_1443796_-	cupin domain-containing protein	NA	NA	NA	NA
WP_143586204.1\|1443783_1444410_-	phosphoribosyl transferase	NA	NA	NA	NA
WP_143586206.1\|1444485_1446168_+	long-chain-fatty-acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	7.4e-38	24.7
WP_096412051.1\|1446222_1446609_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_172596958.1\|1446611_1447037_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_143586208.1\|1447144_1448797_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.3e-148	50.3
WP_011228701.1\|1448793_1449831_-	DUF815 domain-containing protein	NA	NA	NA	NA
WP_143584079.1\|1450011_1450701_-\|transposase	IS5-like element ISTth7 family transposase	NA	NA	NA	NA
WP_143586210.1\|1451160_1455639_+	glutamate synthase	NA	NA	NA	NA
WP_143584174.1\|1455707_1456741_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_143586975.1\|1456706_1457213_-	hypothetical protein	NA	NA	NA	NA
WP_172619196.1\|1457902_1458718_-	PhnD/SsuA/transferrin family substrate-binding protein	NA	NA	NA	NA
WP_143586034.1\|1458809_1460030_+\|transposase	IS256 family transposase	NA	NA	NA	NA
WP_143586214.1\|1460127_1461003_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_143586216.1\|1461015_1461417_+	polysulfide reductase NrfD	NA	NA	NA	NA
WP_143586218.1\|1461368_1462613_-\|transposase	IS256 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP019793

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_AP019792

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection