CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP041636	Ferrovibrio terrae strain K5 chromosome, complete genome	6 crisprs	DinG,WYL,DEDDh,csa3,cas5f	4	5	3	0

1. NZ_CP041636

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041636_1

• CRISPR_ID: NZ_CP041636_1
• CRISPR_location: 951554-951689
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP041636_1

Consensus_repeat	Method
TCGTCATGCACATGGCCGGCTTCGCCATGCGCCGGATTGT	CRISPRCasFinder

spacers of NZ_CP041636_1

>1.1|951594|56|NZ_CP041636|CRISPRCasFinder
GATGATGGCCGTGATCATGCCCATGGTCATGATGGTGGTGATCATGGCCACAATGG

CRISPR arrays and Neighbor proteins around NZ_CP041636_1

CRISPR arrays

The CRISPR arrays of NZ_CP041636_1

>merge|NZ_CP041636|1|951554-951689|CRISPRCasFinder
TCGTCATGCACATGGCCGGCTTCGCCATGCGCCGGATTGTGATGATGGCCGTGATCATGCCCATGGTCATGATGGTGGTGATCATGGCCACAATGGTCGTCATGCACATGCCCGGCTTCGCCATGCGCCGGATTGT

>NZ_CP041636|1|1|951554-951689|CRISPRCasFinder
TCGTCATGCACATGGCCGGCTTCGCCATGCGCCGGATTGT	GATGATGGCCGTGATCATGCCCATGGTCATGATGGTGGTGATCATGGCCACAATGG
TCGTCATGCACATGCCCGGCTTCGCCATGCGCCGGATTGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041636.1|WP_144067563.1|945397_945928_+|DUF3576-domain-containing-protein	unknown	unknown	gnl|CDD|371898
NZ_CP041636.1|WP_144067560.1|941162_942452_-|porin	unknown	unknown	gnl|CDD|379292
NZ_CP041636.1|WP_144067570.1|953857_954832_+|NADPH:quinone-reductase	unknown	unknown	gnl|CDD|176189
NZ_CP041636.1|WP_144258630.1|950179_951220_-|WD40-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|225201
NZ_CP041636.1|WP_144067566.1|949162_950179_+|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl|CDD|235834
NZ_CP041636.1|WP_144067562.1|944278_945169_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|227310
NZ_CP041636.1|WP_144067568.1|952478_953015_+|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl|CDD|223427
NZ_CP041636.1|WP_144067575.1|958969_959761_-|MetQ/NlpA-family-lipoprotein	unknown	unknown	gnl|CDD|224381
NZ_CP041636.1|WP_144067558.1|938747_940310_+|2-polyprenylphenol-6-hydroxylase	unknown	unknown	gnl|CDD|273909
NZ_CP041636.1|WP_144067572.1|956316_957057_+|DUF2470-domain-containing-protein	unknown	unknown	gnl|CDD|223819
NZ_CP041636.1|WP_144067559.1|940233_941082_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|369777
NZ_CP041636.1|WP_144067576.1|959793_960447_-|methionine-ABC-transporter-permease-MetI	unknown	unknown	gnl|CDD|224922
NZ_CP041636.1|WP_144067571.1|956008_956314_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP041636.1|WP_144067574.1|957644_958778_-|hypothetical-protein	unknown	unknown	gnl|CDD|226439
NZ_CP041636.1|WP_144067569.1|953133_953832_+|dienelactone-hydrolase-family-protein	unknown	unknown	gnl|CDD|223489
NZ_CP041636.1|WP_144067564.1|945976_948547_+|leucine--tRNA-ligase	unknown	unknown	gnl|CDD|234743
NZ_CP041636.1|WP_144067573.1|957132_957636_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP041636.1|WP_144067565.1|948533_949166_+|hypothetical-protein	unknown	unknown	gnl|CDD|227755
NZ_CP041636.1|WP_144258631.1|955020_956007_+|sodium-dependent-bicarbonate-transport-family-permease	unknown	unknown	gnl|CDD|377582
NZ_CP041636.1|WP_144067561.1|942794_943988_-|porin	unknown	unknown	gnl|CDD|379292

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP041636.1|WP_144067563.1|945397_945928_+|DUF3576-domain-containing-protein	gnl|CDD|371898	pfam12100, DUF3576, Domain of unknown function (DUF3576). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 100 amino acids in length. This domain has a single completely conserved residue G that may be functionally important.	3.32778e-60
NZ_CP041636.1|WP_144067560.1|941162_942452_-|porin	gnl|CDD|379292	pfam13609, Porin_4, Gram-negative porin.	4.62081e-06
NZ_CP041636.1|WP_144067570.1|953857_954832_+|NADPH:quinone-reductase	gnl|CDD|176189	cd05286, QOR2, Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
NZ_CP041636.1|WP_144258630.1|950179_951220_-|WD40-repeat-domain-containing-protein	gnl|CDD|225201	COG2319, COG2319, FOG: WD40 repeat [General function prediction only].	8.96805e-26
NZ_CP041636.1|WP_144067566.1|949162_950179_+|DNA-polymerase-III-subunit-delta	gnl|CDD|235834	PRK06585, holA, DNA polymerase III subunit delta; Reviewed.	3.2532e-108
NZ_CP041636.1|WP_144067562.1|944278_945169_-|methyltransferase-domain-containing-protein	gnl|CDD|227310	COG4976, COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only].	3.43182e-53
NZ_CP041636.1|WP_144067568.1|952478_953015_+|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl|CDD|223427	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	2.75863e-50
NZ_CP041636.1|WP_144067575.1|958969_959761_-|MetQ/NlpA-family-lipoprotein	gnl|CDD|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	7.13305e-126
NZ_CP041636.1|WP_144067558.1|938747_940310_+|2-polyprenylphenol-6-hydroxylase	gnl|CDD|273909	TIGR01982, Probable_protein_kinase_UbiB, 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol -> 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	0
NZ_CP041636.1|WP_144067572.1|956316_957057_+|DUF2470-domain-containing-protein	gnl|CDD|223819	COG0748, HugZ, Putative heme iron utilization protein [Inorganic ion transport and metabolism].	3.50542e-29
NZ_CP041636.1|WP_144067559.1|940233_941082_+|methyltransferase-domain-containing-protein	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	8.01422e-22
NZ_CP041636.1|WP_144067576.1|959793_960447_-|methionine-ABC-transporter-permease-MetI	gnl|CDD|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	9.50148e-100
NZ_CP041636.1|WP_144067574.1|957644_958778_-|hypothetical-protein	gnl|CDD|226439	COG3926, zliS, Lysozyme family protein [General function prediction only].	1.60577e-09
NZ_CP041636.1|WP_144067569.1|953133_953832_+|dienelactone-hydrolase-family-protein	gnl|CDD|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	1.01264e-55
NZ_CP041636.1|WP_144067564.1|945976_948547_+|leucine--tRNA-ligase	gnl|CDD|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_CP041636.1|WP_144067565.1|948533_949166_+|hypothetical-protein	gnl|CDD|227755	COG5468, COG5468, Predicted secreted (periplasmic) protein [Function unknown].	1.41833e-16
NZ_CP041636.1|WP_144258631.1|955020_956007_+|sodium-dependent-bicarbonate-transport-family-permease	gnl|CDD|377582	pfam05982, Sbt_1, Na+-dependent bicarbonate transporter superfamily. Family of bacterial proteins that are likely to be part of the Na(+)-dependent bicarbonate transporter (sbt) family. Members carry 10TMS in a 5+5 duplicated structure. The loop between helices 5 and 6 in Synechocystis PCC6803 is likely to be the location for regulatory mechanisms governing the activation of the transporter.	4.13032e-120
NZ_CP041636.1|WP_144067561.1|942794_943988_-|porin	gnl|CDD|379292	pfam13609, Porin_4, Gram-negative porin.	5.39861e-09

Protein sequences

>NZ_CP041636.1|WP_144258630.1|950179_951220_-|WD40-repeat-domain-containing-protein
MSTAQTAAPGAQIGFRAYLWQFKSGVVAVASAESAGHAGFGLGDGSIALRPFDNPEAETTRRLIAHPDATLLCLAAAPDGEGFVSGGDDGRLMLTTVSGEGQELATVPRKWIEQLAVSEGGIVYGAGKRVGLLNARGEPVATFDDHPSTVTGLAFNPKGKRFAVSHYGGVSLWWCKAETQPAKRLNWKSSHLTVTWSPDGKFVMTATQENEMHGWRLSDSADMRMSGYPNKPRSLSWSKDGRWLATSGAEVVVVWDCKGKGPMGTAPMELNRGAVVTAVAFHPRLGMVASGDVNGLIKLGRVNDETSIDMEQLGRSPVTALTWSRDGRYLIAGGEDGSAGILDFGE
>NZ_CP041636.1|WP_144067566.1|949162_950179_+|DNA-polymerase-III-subunit-delta
MKLAAREVEGFVKRPRPDIRAILLFGSDAGLIRERAKAIAQSACPDLSDPFRVVTLTGAQLQDDPARLADEAAAMALTGGRRVVMISGAGDRNGKLFAGFFEAAIGDALIVVEAGELTPRSSLRVAFEDAAIGVALGCYADDNRALQGLAEDMIKEAGKKIAPDAMAYLLDNLGADRMITRGEITKLLLYKGDEATPISLEDCEAVIGDSSTLFLDDAAFAAFGGDFNHLTDALTRCEGAGESPVAILRVAQKHGQKLHLAAASREAGNVMDPKRLGVHWTRSAGFEKQMRQWSSDRLMRALEILTDAELMAKSTGMPAASACGDALLRIARAAQVKR
>NZ_CP041636.1|WP_144067565.1|948533_949166_+|hypothetical-protein
MSWSSQIRTLAISLLLAGVVAGCGFRPLYKQTGNTDTVRDFSQISIAQPEDRPSQQLRNFLLDSLTPYGQPDRPLYRLEYRLTESVGSVFVTRSEEITRNNLQLSASVSLRDYQTGAIRTSISASSQASYNVTLADYANLVSEKNARERALRDVAEQIRLRLGNYFDRRPEMERRALERQRMEDQRFNPQPPAQPLPAEQRPELQRGLLQ
>NZ_CP041636.1|WP_144067564.1|945976_948547_+|leucine--tRNA-ligase
MSRYNAKAVETKWQAAWNERQAFRAEADPKRPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKRARGFNVLHPMGWDAFGLPAENAAQEKKIHPAAWTYDNIANMRAELQRMGLSLDWSREFATCHPGYYKYQQEIFLDFLKAGLIDRKESFVNWDPVDHTVLANEQVIDGRGWRSGAVVERRKLSQWFLKITNYADDLLDALQTGLERWPERVKLMQQNWIGKSEGARFAFALQDRSDKVEVYSTRPDTLFGASFVAIAADHPLAAEAAKNDPKLAAFIEECRQSGTAEAELEKAEKKGYRINIEAVHPFDPDWTLPVYVANFVLMEYGTGAIFGCPGHDQRDLDFARKYDLTVKAVVAPKGQANVEIGTEAFTETDNTVAVNSDFLNGLDVAAAKRAAIKKLEELKAGEGTVTFRLRDWGVSRQRYWGCPIPVIHCEDCGIVPVPKQDLPVQLPDDVTFDKPGNPLDHHPTWKHVNCPTCGKAARRETDTCDTFVDSSWYFARFCSPRAELPMVQEEVDYWMPVDQYIGGIEHAILHLLYSRFFTRALRDTGHLSLKSGEPFAGLFTQGMVCHETYRDASGTWLEPTEVKKDSGKVVHIRTNEPVTVGRTEKMSKSKKNVIDPGLIIDTYGADTARWFMLSDSPPERDLEWSESGVEGAWRFTQRLWRLVSEPRGPIAAKAAGKPSDWPQAAQELRRELHKTIAALTQDLEQFHFNKAVARIHEFANLLEAARGDDAATAWARREALESLAKLIGPMVPHLAEEIWQALGHDGLLLEQPWPVADADLARDETVTIAVQVSGKLRATIEVARDMAQPDLEKLALANDNVVRAIDGKPVRKVIIVPNRIVNVVV
>NZ_CP041636.1|WP_144067563.1|945397_945928_+|DUF3576-domain-containing-protein
MLVSALAALLALGGCAAKGDGETQTYYPEKNQYGNYDPSPTGPRQSIFGAGGLNLLGGNQKKDEGSGGGIGVNSFLWRATLDTVSFMPLVSADPFGGVIITDWYTPQQTPAERFKVNVYILDRALRADGIRVAVFRQVRQGDNWADQAPAPNTAVSMENAILQRAREFRMEAEARR
>NZ_CP041636.1|WP_144067562.1|944278_945169_-|methyltransferase-domain-containing-protein
MNSNMQSAQDLLQLAWQAQAAGQLDRAIEIYRKTLGLQETAPAWLGLGQCQLERKDTQAALAAFRQALALMPQSGAIRHMVDMLDGSRVPDRAPDDYVVWVFDGHAESFEAHLAALNYRGPQMVAGLIEGIWDRDGSRAILDLGCGTGLNAPVFKPYAARLDGVDLAPRMLQQSARRGAYDHLYKAEAHAFLRRPPCRYDAVLATDVFIYIGQLDEIFFISDQYLNKNGELLFTIELAEGAQPVELRSSGRFRQTDDYIRNLAERAGFVVVVTHDEALRIENGTPESGRAYRLVRR
>NZ_CP041636.1|WP_144067561.1|942794_943988_-|porin
MKKTLLLQTALVAAAGLFVADIANAQTKEVPLGLTVGGYYNQLLQWQDRSPNGGQSDHGIKQDSEIHFNFRGVLANGTVIGGRVELESATYGDQIDEAYMFIEHAEFGRTEIGSMDSPTTKMIYGAPNSLPNYSTTVQSEYSAVNNAPLMRFANNMDDANRINAYTASNRYFGSKAGKGLQLGVGYAPDNCQDLTTASGAASATAVTSGQQGCGTGFFTPNTVVGLEQQFNAGANYLESFGAFDVALYAGYNSVKVIGAGAATSPSSRETGYQGGALFTWNVGDGSSVQFGGAITNEDVTAVRERKGWTAGVRYLTNGAAPGSVGIGFEYADRNESNSSGATTRVGDLEYWHVGLTYQVAAGILGFAGVGVSDTTDHPTAASNIDQTFGVVGINLTF
>NZ_CP041636.1|WP_144067560.1|941162_942452_-|porin
MKKTLLLQTALVATAGLFLADIASAQTKEVPIALTLGGYFTTVFKAADFDNSRTLNGRQSNAFSTDAEIYFNIRGVLADGTVIGGRVELEGETEGDQIDEAYMYVERSDIGRAEIGSTDRAASKMVFGAPVAIPGYGTIDPTGSIAITNAPTGARTSGNFTKFSGAVDDANGINLYTSANRYFGSKAGKGLQLGVSYTPDGCQDLTSTNNSAFASAPTQIGCGGGFTTRNDAGQVSRAYTYAANYLESFGAFDVGVFGAYNRFDIEANSAGTLANGSATVLKSEGLEGWAVGTTVTYNIGDGSSVQVGGAWKKEEMGVGPNDERNVYTAGARYLTNGTNPGSIGVGVDYAKTKADQGNIAGNTVSGEDEYTWYSLGMTYQVARGILGFGGIGRYEYEDAIAAGTVVGGTAQADNNAKANFAIVGVRMDF
>NZ_CP041636.1|WP_144067559.1|940233_941082_+|methyltransferase-domain-containing-protein
MRAAAARCSGRCGLWLPCSYWHCSSEAKRTEILHMNMYRYCAGWARSNASPGAKVLDYGCGAGTIVQMMIEKGVEAYGCDVFYDGGDYSRRVPPVLLENGTIRRMEGDRIPFEDESFDLIVNNQVLEHVPDLDLVLQEMARVLKPGGRVLSLFPDRSVWRERHCGIPFLHWFPKLSRSRVYYAYALRSLGLGHHKKNKPKWQWSEDFCTWLDNWTYYRPRKIIHDNFRQRIGTIRNLEVQCLTEWLGSRAWLVRLMPAFVSEQIVHKMACLVFETTKPGRAG
>NZ_CP041636.1|WP_144067558.1|938747_940310_+|2-polyprenylphenol-6-hydroxylase
MLTNLRHLFRLFAIGRCLARHDALFLLQQAPVGGTTARQALRLFQVLFGRRRPDLREGERLAAALADLGPSFIKLGQVLSVRPDMVGPAIAEDLGRLRDKLPPFSWEEAHAILTAELGAPPEQLYADITIVPVAAASVAQVHLATTSMGLPVAVKVLRPGVEAAFARDLKLFAWLAETMEHHVAGMARLRPRDVVLALAEWVSIELDLRLEAAAASELRDNFIDDADVIVPAIDWQRTGRRVMTVQRISGTPIEDRAALVAGGIDVTVVADRVIRVFLKQALRDGYFHADMHHGNLFVAPDGRLELVDFGIMGRLDLKTRRFMAEMLGAFLTGNWRRAAEVHFEAGYVPADRSVDAFAQACRSIGEPILDRPVAEISVGRLLAQLFQITETFGMQTQTHLLLLQKTMVTVEGVARSLDPEINFWDAARPVIEDWAREHMGPEAYIRETAGSMMDFARKLPQVARDLETLAETTKTEGLQLSPASIAALAESQALANARRRRPLLWALWTVAALLVLALFI
>NZ_CP041636.1|WP_144067568.1|952478_953015_+|methylated-DNA--[protein]-cysteine-S-methyltransferase
MTKNRATYSLTLPSPLGSLTVFATSQAIVKLDWGGRGAQKASWSADTDTPPEAQALLDEAGRQLAAYFADGKTSFDLPLDPAGTEFQQAVWDFMLAIPAGRTRSYGEAASAVGTGTADARAVGSACGANPIPVIIPCHRILAAGGDAGGYSGKGGLETKRWLLRHEGAYVPSEQVSLF
>NZ_CP041636.1|WP_144067569.1|953133_953832_+|dienelactone-hydrolase-family-protein
MAKTVTINAHDGGSFSAYVAGDQNVSKGGPGILVIQEIFGINEVMRDICDDLAAQGYVALCPDLFWRQEPGVDITDKTKEHWDKAFALFGGFNVDLGIADLKSSLSALRQLTGGKVGTVGYCLGGKLAFLMAARSDVDAAVSYYGVGLADHTGEVANIKKPLLMHVATEDKFVPKDQQAKVKAAVAGNSNVTLHEYQGNDHAFARVGGEHYDQAAAYAANTRTANFFKSHLS
>NZ_CP041636.1|WP_144067570.1|953857_954832_+|NADPH:quinone-reductase
MVHAIRIHAPGGPEQMKWEEVEVGAPGPGQIRLKTTAAGLNYIDTYHRTGLYKLPLPLTLGMEGAGTVTAVGDGVTDIKVGDRVAYASAPLGSYSEERLMQADRVVVLPQGISDQTAAAIMLKGMTTEYLVQRTYKVKPGDTVLFHAAAGGVGLLFGQWAKALGATVIGTVGSEDKAKLARAHGYDHIINYRTENFAERVKELTKDAGVPVVYDGVGKDTWAGSLDCLSPFGLMVSFGNASGPVPPFEIATLAGKGSLYVTRPTLVTYTAKRADLVNSAKALFDVVSSGKVKVEVPQTYALKDAAKAHADLEARKTTGSTLLLP
>NZ_CP041636.1|WP_144258631.1|955020_956007_+|sodium-dependent-bicarbonate-transport-family-permease
MTELLHLAAGNLLSPMILAFVLGAVAAFVRSDLEIPEGAAKALAIYLMFAIGFKGGVAMHAASGWALAGAIMAALALSLALPLIAFVLLRGVWQQNRTNAAAIAAHYGSISIVTFVTAAEFLRSRDIPYEGYLVAMTAVMETPAILIGLMLAGGQKSPGMPDRTSERGALFREVLVNGSVMLLMGGFAIGWITGDAGLAKIRPFVADLFNGALCIFLLDMGLVAVRQGRAARQFPKALILFGLVMPPIGATCGFLAAAALGLSAGGAMLLAVLAASASYIAVPAAMRLALPAANPSLSVTLALAITFPFNVAIGLPLYLTVAQRLFGG
>NZ_CP041636.1|WP_144067571.1|956008_956314_+|hypothetical-protein
MAHPRKKIEIIVEAPLQKPVLDWLSAQGVKGWSLFPRVIGGGKHGERSGDDITRAFDNVMIVAVATEPVARVVLDGFHTRFADAVAVVYISDVEVSRADRF
>NZ_CP041636.1|WP_144067572.1|956316_957057_+|DUF2470-domain-containing-protein
MTKLPVDTKSPAQQARAVARACRTASLATTMSGQNGQPYASLVLVAFDHDAAPLLLISRLAEHTKNLISNDRASLLCDGTAGFAEPLTGPRVSLLGRAVKTEDPRHRARFLARHPSAEMYAGFGDFAFYRLAVERAHIVAGFGKIHWLDDYTYAGESDRLIDAEAGILEHMNADHADAVQLYASRLLGRAGDGWSLCGIDAEGCDLIRADEDHGGELARLNFGKTIATAEDARIELVRLVKQARNA
>NZ_CP041636.1|WP_144067573.1|957132_957636_+|hypothetical-protein
MIVLPGLAVAQGNDPMLLPPDSPGVWRRMTRDDATTTSRCVGNPVTPLCALETYLACFVRRQPELCDMVGAGIRPIMSVVPPADKREEYRLIYTRRPSPLDPIDRSTEGNMKPQPGDVVIAYMVRSCYGDVDDQTACRKVENDPPYVHMLRKQGDFWVYAYRFRARF
>NZ_CP041636.1|WP_144067574.1|957644_958778_-|hypothetical-protein
MSLLSKENFFDNLFSFGGSVGRNGDNGRDDVIKAQTLLADAGYLDLPAPGIPTGWPGDGLTRAITNLQKDNGLEADGLLLPMVQGRVAQNGVGETLHLLQQQSGSHLKNRPALTPQQVDDYWQQPRDAEDEIQLAQANSVQTDALPQAPAPMPQQKPMPQSEFMPVPGHKRDFFLKPENKDVWTDSQSAIQRQLPGQPSQGTAIGRIYAEEGGRVRDPNGTAVGGITETTLQDMQGKGLLPGLPKDVKPGDLTPDQQVQVYRAYLDQGFRHVGGAKALEQLDPDLAHAVADAMFMHGSSGGMTFVQEAIYDSGIDPAIKADGGMGPQSFAALKKASDDPKLRDALQTAIVESRLKAKEWTPGEIDRISRTRPGAWRR
>NZ_CP041636.1|WP_144067575.1|958969_959761_-|MetQ/NlpA-family-lipoprotein
MSVTRRSLALLALAALVASPALAQDKPIKVGVTAGPHAEIFEVVKKVAEKDGLKIQIVEFSDYIQPNAALNAGDLDVNSYQHLPYLEAQIKDRGYKLVNIGYTVNFPMGVYSKKVKQLSDLPAGARVGIPNDPTNGGRGLLVLESAGLIKLRKEAGLKATPLDIIDNPKKVRIVELDAAQLPRALDELDAAAINTNYALPAGLSPTRDAIASEGAKAPYVNIIAVRTQDKDKPEYARLVKAYQSAEVKAFVEQKYQKAVVTAW
>NZ_CP041636.1|WP_144067576.1|959793_960447_-|methionine-ABC-transporter-permease-MetI
MSSQLIALLFDGLIETLVMVGVSGGIGALFGIPLGVILILTDRGGILQNLTANRVLGLAINAARSTPFIILMVAIIPFTRLVAGTSIGTAAAIVPLTIAAIPFIARLVETALREVPSGLIEAADAMGATPLQIVVKVLLPEALPGIVAGLTITFVSLIGYSAMAGAVGGGGLGDIGIRYGYQRFLPEVMLAVVLVLIVFVQGVQSAGDRLVRKLSHR

Crispr_ID: NZ_CP041636_2

• CRISPR_ID: NZ_CP041636_2
• CRISPR_location: 3344640-3344785
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP041636_2

Consensus_repeat	Method
GCGGCGGTTTCGGTGATCGCGGC	CRISPRCasFinder

spacers of NZ_CP041636_2

>2.1|3344663|34|NZ_CP041636|CRISPRCasFinder
CCGCGTCCCCCGCGTCAATCGCGGTTCGGTGACC
>2.2|3344720|43|NZ_CP041636|CRISPRCasFinder
GGCTTTGGCGACCGTGGCGGTTATGGTGACCGCGGCGGCGATC

CRISPR arrays and Neighbor proteins around NZ_CP041636_2

CRISPR arrays

The CRISPR arrays of NZ_CP041636_2

>merge|NZ_CP041636|2|3344640-3344785|CRISPRCasFinder
GCGGCGGTTTCGGTGATCGCGGCCCGCGTCCCCCGCGTCAATCGCGGTTCGGTGACCGCGGTGGTTTCGGTGATCGCGGCGGCTTTGGCGACCGTGGCGGTTATGGTGACCGCGGCGGCGATCGTGGTGGCTTCGGCGATCGCGGT

>NZ_CP041636|2|2|3344640-3344785|CRISPRCasFinder
GCGGCGGTTTCGGTGATCGCGGC	CCGCGTCCCCCGCGTCAATCGCGGTTCGGTGACC
GCGGTGGTTTCGGTGATCGCGGC	GGCTTTGGCGACCGTGGCGGTTATGGTGACCGCGGCGGCGATC
GTGGTGGCTTCGGCGATCGCGGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041636.1|WP_144069718.1|3342122_3342593_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl|CDD|224991
NZ_CP041636.1|WP_144069716.1|3338927_3339725_-|xanthine-dehydrogenase-family-protein-subunit-M	unknown	unknown	gnl|CDD|224238
NZ_CP041636.1|WP_144069724.1|3346658_3347444_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|223673
NZ_CP041636.1|WP_144069714.1|3336783_3337446_+|nitrile-hydratase-subunit-beta	unknown	unknown	gnl|CDD|376740
NZ_CP041636.1|WP_144069722.1|3345130_3345658_-|PAS-domain-containing-protein	unknown	unknown	unknown
NZ_CP041636.1|WP_144258788.1|3337451_3337796_+|nitrile-hydratase-accessory-protein	unknown	unknown	gnl|CDD|188404
NZ_CP041636.1|WP_144069712.1|3334774_3336136_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|273593
NZ_CP041636.1|WP_144069720.1|3343494_3344256_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP041636.1|WP_144258789.1|3347440_3348127_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224041
NZ_CP041636.1|WP_144069715.1|3337798_3338851_-|Ldh-family-oxidoreductase	unknown	unknown	gnl|CDD|376860
NZ_CP041636.1|WP_144069723.1|3345707_3346646_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270369
NZ_CP041636.1|WP_144069729.1|3352661_3353768_-|mandelate-racemase/muconate-lactonizing-enzyme-family-protein	unknown	unknown	gnl|CDD|239432
NZ_CP041636.1|WP_144069725.1|3348337_3349459_+|acetoin-utilization-protein-AcuC	unknown	unknown	gnl|CDD|212520
NZ_CP041636.1|WP_144069728.1|3351643_3352618_+|DctP-family-TRAP-transporter-solute-binding-subunit	unknown	unknown	gnl|CDD|270390
NZ_CP041636.1|WP_144069717.1|3339744_3342117_-|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224446
NZ_CP041636.1|WP_144069719.1|3342699_3343377_-|carbon-monoxide-dehydrogenase-subunit-G	unknown	unknown	gnl|CDD|176853
NZ_CP041636.1|WP_144069726.1|3349491_3349944_+|DUF192-domain-containing-protein	unknown	unknown	gnl|CDD|376876
NZ_CP041636.1|WP_144069727.1|3350138_3350471_+|ETC-complex-I-subunit	unknown	unknown	gnl|CDD|368126
NZ_CP041636.1|WP_144069713.1|3336148_3336787_+|nitrile-hydratase-subunit-alpha	unknown	unknown	gnl|CDD|367280
NZ_CP041636.1|WP_144258790.1|3350885_3351620_+|FCD-domain-containing-protein	unknown	unknown	gnl|CDD|224715

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP041636.1|WP_144069718.1|3342122_3342593_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl|CDD|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.44276e-82
NZ_CP041636.1|WP_144069716.1|3338927_3339725_-|xanthine-dehydrogenase-family-protein-subunit-M	gnl|CDD|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	8.0574e-82
NZ_CP041636.1|WP_144069724.1|3346658_3347444_-|ABC-transporter-permease-subunit	gnl|CDD|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	1.63106e-55
NZ_CP041636.1|WP_144069714.1|3336783_3337446_+|nitrile-hydratase-subunit-beta	gnl|CDD|376740	pfam02211, NHase_beta, Nitrile hydratase beta subunit. Nitrile hydratases EC:4.2.1.84 are unusual metalloenzymes that catalyze the hydration of nitriles to their corresponding amides. They are used as biocatalysts in acrylamide production, one of the few commercial scale bioprocesses, as well as in environmental remediation for the removal of nitriles from waste streams. Nitrile hydratases are composed of two subunits, alpha and beta, and they contain one iron atom per alpha beta unit.	3.29691e-110
NZ_CP041636.1|WP_144258788.1|3337451_3337796_+|nitrile-hydratase-accessory-protein	gnl|CDD|188404	TIGR03889, nitrile_hydratase_activator_P14k, nitrile hydratase accessory protein. Members of this protein family are found in operons with the alpha and beta subunits of nitrile hydratase, an enzyme with Fe(III) or Co(III) at the active site, and appear to be accessory proteins for maturation or activation of the enzyme. This protein is homologous to the beta subunit (see TIGR03888).	6.47042e-24
NZ_CP041636.1|WP_144069712.1|3334774_3336136_+|HAMP-domain-containing-protein	gnl|CDD|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	4.14733e-47
NZ_CP041636.1|WP_144258789.1|3347440_3348127_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	2.87901e-72
NZ_CP041636.1|WP_144069715.1|3337798_3338851_-|Ldh-family-oxidoreductase	gnl|CDD|376860	pfam02615, Ldh_2, Malate/L-lactate dehydrogenase. This family consists of bacterial and archaeal Malate/L-lactate dehydrogenase. L-lactate dehydrogenase, EC:1.1.1.27, catalyzes the reaction (S)-lactate + NAD(+) <=> pyruvate + NADH. Malate dehydrogenase, EC:1.1.1.37 and EC:1.1.1.82, catalyzes the reactions: (S)-malate + NAD(+) <=> oxaloacetate + NADH, and (S)-malate + NADP(+) <=> oxaloacetate + NADPH respectively.	3.51066e-98
NZ_CP041636.1|WP_144069723.1|3345707_3346646_-|ABC-transporter-substrate-binding-protein	gnl|CDD|270369	cd13651, PBP2_ThiY, Substrate binding domain of ABC-type transporters for thiamin biosynthetic pathway intermediates; a member of the type 2 periplasmic binding fold superfamily. ThiY is the periplasmic N-formyl-4-amino-5-(aminomethyl)-2-methylpyrimidine (FAMP) binding component of the ABC transport system (ThiXYZ). FAMP is imported into cell by the transporter, where it is then incorporated into the thiamin biosynthetic pathway. The closest structural homologs of ThiY are periplasmic binding proteins involved in alkanesulfonate/nitrate and bicarbonate transport , as well as THI5 which is responsible for the synthesis of 4-amino-5-(hydroxymethyl)-2-methylpyrimidine phosphate (HMP-P) in the thiamin biosynthetic pathway of eukaryotes. After binding the ligand, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ThiY/THI5 proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.14887e-109
NZ_CP041636.1|WP_144069729.1|3352661_3353768_-|mandelate-racemase/muconate-lactonizing-enzyme-family-protein	gnl|CDD|239432	cd03316, MR_like, Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).	1.48966e-112
NZ_CP041636.1|WP_144069725.1|3348337_3349459_+|acetoin-utilization-protein-AcuC	gnl|CDD|212520	cd09994, HDAC_AcuC_like, Class I histone deacetylase AcuC (Acetoin utilization protein)-like enzymes. AcuC (Acetoin utilization protein) is a class I deacetylase found only in bacteria and is involved in post-translational control of the acetyl-coenzyme A synthetase (AcsA). Deacetylase AcuC works in coordination with deacetylase SrtN (class III), possibly to maintain AcsA in active (deacetylated) form and let the cell grow under low concentration of acetate. B. subtilis AcuC is a member of operon acuABC; this operon is repressed by the presence of glucose and does not show induction by acetoin; acetoin is a bacterial fermentation product that can be converted to acetate via the butanediol cycle in absence of other carbon sources. Inactivation of AcuC leads to slower growth and lower cell yield under low-acetate conditions in Bacillus subtilis. In general, Class I histone deacetylases (HDACs) are Zn-dependent enzymes that catalyze hydrolysis of N(6)-acetyl-lysine residues in histone amino termini to yield a deacetylated histone (EC 3.5.1.98). Enzymes belonging to this group participate in regulation of a number of processes through protein (mostly different histones) modification (deacetylation). Class I histone deacetylases in general act via the formation of large multiprotein complexes. Members of this class are involved in cell cycle regulation, DNA damage response, embryonic development, cytokine signaling important for immune response and in posttranslational control of the acetyl coenzyme A synthetase.	1.38961e-130
NZ_CP041636.1|WP_144069728.1|3351643_3352618_+|DctP-family-TRAP-transporter-solute-binding-subunit	gnl|CDD|270390	cd13672, PBP2_TRAP_Siap, Substrate-binding domain of a sialic acid binding Tripartite ATP-independent Periplasmic transport system (SiaP); the type 2 periplasmic-binding protein fold. This subfamily represents the periplasmic-binding component of TRAP transport system SiaP, a sialic acid binding virulence factor. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process and a smaller membrane of unknown function. The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.41563e-129
NZ_CP041636.1|WP_144069717.1|3339744_3342117_-|molybdopterin-dependent-oxidoreductase	gnl|CDD|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	0
NZ_CP041636.1|WP_144069719.1|3342699_3343377_-|carbon-monoxide-dehydrogenase-subunit-G	gnl|CDD|176853	cd05018, CoxG, Carbon monoxide dehydrogenase subunit G (CoxG). CoxG has been shown, in Oligotropha carboxidovorans, to anchor the carbon monoxide (CO) dehydrogenase to the cytoplasmic membrane. The gene encoding CoxG is part of the Cox cluster (coxBCMSLDEFGHIK) located on a low-copy-number, circular, megaplasmid pHCG3. This cluster includes genes encoding subunits of CO dehydrogenase and several accessory components involved in the utilization of CO. This family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands.	1.15589e-61
NZ_CP041636.1|WP_144069726.1|3349491_3349944_+|DUF192-domain-containing-protein	gnl|CDD|376876	pfam02643, DUF192, Uncharacterized ACR, COG1430. Two structures have been solved for members of this large (>500 members) family of bacterial proteins present mostly in environmental bacteria and metagenomes (distant homologs are also present in several Plasmodium species). TOPSAN analysis for Structure 3pjy shows that there is much similarity with the other solved structure, Structure 3m7a, solved for UniProt:Q2GA55 (Saro_0823), a homolog of Thermotoga maritima TM1668, UniProt:Q9X1Z6., The homolog in Caulobacter crescentus (CC1388), UniProt:Q9A8G6, is associated with CspD, a cold shock protein (CC1387), UniProt:Q9A8G7. However, the genomic context of UniProt:Q2GA55 is most conserved with a putative xylose isomerase, suggesting a possible role in extracellular sugar processing. Saro_0821, UniProt:Q2GA57, is annotated as an AMP-dependent synthetase and ligase. Structure 3m7a structure corresponds to the C-terminal (27-165) fragment of the YP_496102 (Saro_0823) protein and it is structurally unique, as the best hits from Dali have a Z-score of 3.8 (1nt0, 2j1t, 3kq4) and it is thus a likely candidate for a new fold. Interestingly, many of the top Dali hits are involved in sugar metabolism. There are no obvious active site-like cavities on the protein surface of 3m7a (http://www.topsan.org/Proteins/JCSG/).	5.28686e-52
NZ_CP041636.1|WP_144069727.1|3350138_3350471_+|ETC-complex-I-subunit	gnl|CDD|368126	pfam04800, ETC_C1_NDUFA4, ETC complex I subunit conserved region. Family of pankaryotic NADH-ubiquinone oxidoreductase subunits (EC:1.6.5.3) (EC:1.6.99.3) from complex I of the electron transport chain initially identified in Neurospora crassa as a 21 kDa protein.	9.37088e-50
NZ_CP041636.1|WP_144069713.1|3336148_3336787_+|nitrile-hydratase-subunit-alpha	gnl|CDD|367280	pfam02979, NHase_alpha, Nitrile hydratase, alpha chain.	3.39434e-124
NZ_CP041636.1|WP_144258790.1|3350885_3351620_+|FCD-domain-containing-protein	gnl|CDD|224715	COG1802, GntR, Transcriptional regulators [Transcription].	8.05076e-52

Protein sequences

>NZ_CP041636.1|WP_144069720.1|3343494_3344256_+|hypothetical-protein
MVPATRSGIDVSFWLLEQAATERIAMSLPKLRWLLYLAQAHYAIARDGAKLMPATFLVGDDGPIEPTLDLVFQAGIENPWSPALSETAAAFLEGFWKRFGALPAIALHKLVIGDPAWRKAQENGPGSEIAVDLHRASAPKPTSLGHAPVHPASATGARRRPPAPPAVLPPFEEAVRQKIAEHAIDAAHPLTRAVRTAQPARPGQQSQAKTASVQEAAGHLRAAPPDSQEVRFTADGRSVTRWRPKRRVEGPTI
>NZ_CP041636.1|WP_144069719.1|3342699_3343377_-|carbon-monoxide-dehydrogenase-subunit-G
MELTGEQLIPASRQAVWDAINDPEILRQCITGCESVTKTSDTDFEAAVLVKVGPVKARFKGKVTLGDLDPPSSCTISGEAQGGVAAGFGKGSAKVQLVDAQIDGTPGPATRLSYSVNAQVGGKLAQIGARLIDGVAAKMAEDFFTKFNQIVGGPAAGADIASTVAEAAKDIAMAEPISASAAADALQRPAATQPSTPVTGGIPSWLWITGLIAIVCAATVLILRS
>NZ_CP041636.1|WP_144069718.1|3342122_3342593_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MTISVTITVNGQPETRDVEPRTLLVQFLREHLQLTGTHVGCDTSQCGACVVHVDGKSVKACTILAAQAQGAKVTTIEGLAQDGKLHPMQEAFREHHALQCGFCTPGMIMSAVDLAQRNPNPNEETVRHELEGNLCRCTGYHNIVKAVMAGAQAMRG
>NZ_CP041636.1|WP_144069717.1|3339744_3342117_-|molybdopterin-dependent-oxidoreductase
MTNQGIGQSVRRKEDFRFITGQGHYTDDINRPGQLYAYFHRSPHAFAKIKSISTDAARKMPGVVAVYTGKDVAADKVGGLICGWTVKDKKGEPHKAPRHDIIAIDHVRHVGDQVAVVIARSLGEARDAAEAIEVDYDVLTPVVDVVNALKPGAPEVHADAPGNLCYDWDFGDKAATEAAFAKAAHVTKIDLVNNRLSPNPMEPRSAIGEYEPGTDNTTVYTTSQNPHVIRLILCAFVFGLPEHKVRVIAPDVGGGFGSKIFNYAEETVCVWAARKLKKPVKWTSDRTEAFLTDAHGRDHVTHAELAMDKDGKFLGFRVETKANMGAYLSTFASAVPTYLYALLLAGQYTTPAIYAEVKAVFTNTTPVDAYRGAGRPEATYVVERIVEAAARELKVDPAELRRRNFVPDDAFPYQTPVACVYDSGQYAKALDEALKMSDYSGFKQRKADAAKKGKLRGIGLCAYIEACGIAPSAVVGSLGAGVGLWESAQIRFNATGSVFVHTGSHSHGQGHETTFAQIVSDRLGVPLESIEVVHGDTALVPMGMGTYGSRSLAVGGSAIMRAADKIIDKGKKIAAHLMEASADDVAYDKGVFSVKGTDKQVPMAQIAFTAYVPHNYPADLEPGLEASAFYDPANFTFPAGVHVAEVEIDSDTGVTHIVNWVAVDDFGKVVNPMIVEGQVHGGIAQGIGQALLEGVVYDPKSGQLLTASFNDYCMPRADDLPSYNVGMIETPCPHNPLGVKGCGEAGAIAAPAALMNAITDALGTEKINMPATPQNVWRVIQSQNLAAAAE
>NZ_CP041636.1|WP_144069716.1|3338927_3339725_-|xanthine-dehydrogenase-family-protein-subunit-M
MYAFNYHRPKSLADAAKLLGDASDGKFIAGGQTLLPTLKNRLASPSDLVDLTGIAELSGISVAGSTVSIGAITKHGAVATSAEVKKAIPALSTLAGLIGDPAVRNMGTVGGSVANNDPAADYPSAVLGLNATVHTTKRKIAADSFFTGLFETALADGEIITKIEFPVPKRAGYEKFRNPASRYAMVGVFVAETADGVRVAVTGAGPCVFRHKEMEAALSKSFSVDALKGIKTDPAKMNNDIHGSGEYRAHLVGVVAKRAVQNALG
>NZ_CP041636.1|WP_144069715.1|3337798_3338851_-|Ldh-family-oxidoreductase
MTERFAATDLVTFAIDLLRKGGLDVEKARATAAILVEGDLMGHSTHGLQLLGPYLAELEAGRMAKNGEPTIIAERPAVLTWNGHYLPGPWLVLKAIENAITRARTYGTGTVVINHSHHIACLAAYPLRVIERGMALLIASSDPHSGSVAPFGAIVGRYTPNPIAGGWPTKTTPVIFDISASTTTNGMVARLNRTGGKLGGPWLVDNKGNATDDPASFTATPPGAVLPLGGMDLGHKGFALGLLVEMLTSALAGSGRAEGSKQWGARVFVQVIDPAAFGGAEAFAQETEWLAEACRTAPVKPGNPSVRMPGERGLKLRTQQQAEGVTLHPEIMPSLRPWADKLGISVPKTA
>NZ_CP041636.1|WP_144258788.1|3337451_3337796_+|nitrile-hydratase-accessory-protein
MKDILPDLPCDDTAAPVFRAPWEAQAFAMAVSLHQKGLFTWTEWAAVLTAEIRAAQAAGDPDTGATYYHHWLRALERLAVEKGAATPAALQAKAAAWDRAARATPHGQPVTLLS
>NZ_CP041636.1|WP_144069714.1|3336783_3337446_+|nitrile-hydratase-subunit-beta
MNGGADMGGMMGFGPVRHEGEHEPKFHAEWEKRVLALTLAIGSTGQWNIDMSRSARESLPPPQYFAKTYYEIWLAGIEKLMIERGMISADEIETGRVLAPPKPLPRILKAESVAAVLSKGGPTARASEQPARFKAGARVRAKNIHPAGHTRLPRYVRGHVGTIELLHGVHVFPDSNARGQGEQPQWLYTVRFEGRELWGPEADPTHSVSVDAWDSYLDPA
>NZ_CP041636.1|WP_144069713.1|3336148_3336787_+|nitrile-hydratase-subunit-alpha
MTHDHDHDHHHHDHDHDHGTVLSDVELRVRALESILVEKGYVDPAALDVLIETYETKVGPHNGAHVVAKAWSDPAYRDWLLKDATAAIESLGYVGRQGEHMVAVENTPSTHNMVVCTLCSCYPWPVLGLPPVWYKSAPYRSRAVMDPRGVLQDFGVTLPEGKNIKVWDSTAEIRYLVLPERPEGTEGWSEEKLATLVTRDSMIGTGVAGQPT
>NZ_CP041636.1|WP_144069712.1|3334774_3336136_+|HAMP-domain-containing-protein
MPKLLRSTATRLALVFAILFMVAAMLLAGLLWWTTTGYLDRETDAVIAADTRAIGDRLSDFGLAGAVQTMNERIAADADNRGIYLLTDPRLRPLGGNVDAWPLKVGPRPGWYEIELVHRDRLHVARLLHVTLPGNFQLLVGRDVQDRVEMRNLFLRGLVWAGVAALTFAFFGAWLIRRAVERRIEGINRTALAIVQGDLARRVPLRDADDEFDQLVATINRMLDQIQQLIEGVRNVSNAIAHDLRTPLAETRARLEGLLRQPAGMDVSLDGIAAAIADIDRLIGVFNALLRLAELETGLRRAGFASVDVPALLDDAAELYSPAADAKGLDLVSHADTGLVLNGDRQLLAQAIGNLLDNAVKYTPAGGRIDVRAEVGTDGRILISVADSGPGIPEAERTRAVQRFYRGDASRHAEGVGLGLSLVEAVARLHGGELRLDGNNPGLRAVLALPPQA
>NZ_CP041636.1|WP_144069722.1|3345130_3345658_-|PAS-domain-containing-protein
MQRPDYAKLDAQFARMRDYLAGVAPPGKLPGRQHIDPLAIRALLSFTNLVDVERTDGKIRFRFRLIGTLQSTAAGREISGQYLEDAVLPEYFGRIHGNMMAVLERREAVYDRFGMPHPGRDFIDTERVYFPLARDGENVDMLLILNAYPDEEKTAAPAVEGKASRPAVRHPAPPK
>NZ_CP041636.1|WP_144069723.1|3345707_3346646_-|ABC-transporter-substrate-binding-protein
MKRMIAIAGFVTALLPGIASAHDKLTVLLDWFVNPDHAPLIVAKHTGIFDRNELLVDLVAPADPNDPPKLVAAGKAEVAISYQPQLHVQVAQGLPLRRIGTLVATPLNSLVVLRDGPVKSIADLKGKKIGYSVGGFEDALLKSMLEQYGLKLTDVTLINVNFSLSPSIFSGQVDATIGAFRNFELNQMDIAGKPGRAFYPEDYGVPLYDELVLVAHKDKLNDDRLKRLLDAIEEAVAYMHNEPQKSWQAFIKESKSLDDELNRRAWGATLPRFAQSPRALDNHRYSRFADYLVKQGLIPNALPVADYAAELR
>NZ_CP041636.1|WP_144069724.1|3346658_3347444_-|ABC-transporter-permease-subunit
MNSLIRTAITLIGLLLLWQGIVWVFELPPYILPAPDRVAVALVDNAALLLGEAAVTVAEMLLGLLFGSLLGAIAAISLLLSPVARRWLLPLLIASQAVPVFALAPLLVLWLGFGMASKVMMAVLVIFFPVAVALYDGLRRTESGWLDLARVMTADAPRHRLRILLHIRVMAALPAFASGLKIAAAVAPIGAVIGEWVGASAGLGFRMLQANARVQTDLMFAALILLAACAVGLYAGVDIATRRLLRWQADSHAPLSTDRVS
>NZ_CP041636.1|WP_144258789.1|3347440_3348127_-|ATP-binding-cassette-domain-containing-protein
MEGSGFAYGNRAVLAPFSLDLAAGETVAILGASGCGKSTLLRLIAGLLPGQSSPFAGQAAWMAQQDLLLPWLSLQDNILLGARLRGEVPDIALAQTLLTRLGLADRATALPASLSGGMRQRAALARTLMEDRPLVLMDEPFSALDAITRAAMQELASEMLAHRTVLLVTHDPAEACRLANRIFILSGQPASLQQAAVLSPAAPRDPLSASVLPVLRGVQAALQKAVAV
>NZ_CP041636.1|WP_144069725.1|3348337_3349459_+|acetoin-utilization-protein-AcuC
MHQPALFIGNEIYRHSSLGGKHPLSIPRVSTVMDMVHALGWLEDGQYRESRQATPEQLARFHREDYVAAVQAAERTLTVSREDSERYNLGRGGNPVYATMFRRPATGVGGSLIAAQHLLQNGGGIVYSPGGGTHHGRPAQASGFCYFNDPVLAILAMLDAGLSRVAYIDLDVHHGDGVADAFAADPRVLVVSVHEAGRWPHSGQLDEEGVGNLFNLPITPGMVDDEMMALVEEAIGPLVEGFRPDALVIQCGADALADDPLGKQTLSNGALWHAVAALKPLAPRLLVLGGGGYNPWSVARCWTGIWAELNGLEKPDRLPPVAETLLRGLSWNRSAGRHPPNHWFVTLADIPRHGPVRDEVQGLVRRVKERMRA
>NZ_CP041636.1|WP_144069726.1|3349491_3349944_+|DUF192-domain-containing-protein
MILLATLTVAPPIAAQPQPTLPQSDLVIQTAKGPQRFRVELADNDQSRARGMMFRTSMAPDAGMLFDFRQEQMASFWMRNTLLPLDMLFIKADGTILNIHQRAIPRDETGINSVGPVRAVLEVNGGTTARLGIKAGDKVEHAIFGNTPRK
>NZ_CP041636.1|WP_144069727.1|3350138_3350471_+|ETC-complex-I-subunit
MALTTSRPRIRTMTKARIYQPTKTAMQSGRARTQQWVLEYDTAASRFVEPLMGWTGAAGTLGQLTLKFDSKEEAIAYANKKGIAYDIEEPQVRKLNRRAYADNFAYTRIR
>NZ_CP041636.1|WP_144258790.1|3350885_3351620_+|FCD-domain-containing-protein
MRGNTSPGGATASAQVYQQLRAQIIALDIPPGAALSENDLASAFGVSRTPVREALLRLADEGLVEIVPKSGTTVSRIPYAQLAEAIVIRKALEEVAVREASLRATKSQFTGLWALIERQREAAKADDRDAFHAADEAFHAAIAEAAGYPGIWRLVNQVKVQVDRLRHLTLPEGGRMLRVTKEHAAVLTAMEKRDGNKAIAAMRGHLDGLEYSLPEIRRSNPDYFVGETGVFVLPGVAGRKTRSA
>NZ_CP041636.1|WP_144069728.1|3351643_3352618_+|DctP-family-TRAP-transporter-solute-binding-subunit
MKKMMTGLAVAALFAVAGPAGAQTKLKWAHVYETPEPYHTEAVWAAGEIAKLTNNKYQIDVFPASQLGNENQINEGLGLGTVDMIYTGVAFAGSIHKPIAITNAPFILRDFDHWKAYRDSKLFRDIAAGYEQKTKHKVTALTYYGQRHVTANKAINKPEDMKGMKLRVPPAPLFLMFTKSVGANATPIAFAEVYLALQQGTVDGQENPLPTIMAKKFYEVQSHIMLTGHITESLLSIVGSHVWAKLNDAEKKIFDETLRAAAMRASDKIRASELSLADEFKKLNKTVVTPDREAFRKAAMPLHNDASAGAGWSQAEYDALQALK
>NZ_CP041636.1|WP_144069729.1|3352661_3353768_-|mandelate-racemase/muconate-lactonizing-enzyme-family-protein
MARIARVEVGQVDLPPKVKRTDAIQSFVTQETPMVRITTTDGLVGTGYTYTIGTGGSSVVALLRDHLAPRLIGRDPALIEMIWKDLFFATHATAVGAITSLALAAIDTALWDLRCLAAERPLWQEAGGAQPAVPVYTTEGGWLHIEPAALVDDTLKARDAGFRGAKIKVGRPHVAEDVARLGAVRQAVGPAFEIMTDANQAFTAAEAIRRARQFEAFDLAWFEEPLPAEDLDGHRRLCGATTLPIAVGESIYHPSHFREYLQQRACSIVQPDVARIGGITPWLKVAHLAETFNTPICPHFLMELHVSLCAAVPNAAWVEWIPQLDDVTLNRLEIADGKAVAPMAPGLGIDWNWDAIAKRQAFTPIVIS

Crispr_ID: NZ_CP041636_3

• CRISPR_ID: NZ_CP041636_3
• CRISPR_location: 3736247-3736508
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NZ_CP041636_3

Consensus_repeat	Method
CGACCTGCGTCGTGGTCAGCGCC	PILER-CR

spacers of NZ_CP041636_3

>3.1|3736270|49|NZ_CP041636|PILER-CR
CCGAGCTGCGTCGAGCTCAGTTCACTGACATCGGTGCTTTCCAGCGCGC
>3.2|3736342|73|NZ_CP041636|PILER-CR
TTGAGCTGAGCCGCCGACAGCGACTGAACCTGTGTGGTGACCAGCGCATTCAGGTCGGTGGTCTCAAGCGCAC
>3.3|3736438|49|NZ_CP041636|PILER-CR
TTGACCTGCGTCTCCGTCAGGTCCGCGATGTCAGTCGTCTCAAGCGAGG

CRISPR arrays and Neighbor proteins around NZ_CP041636_3

CRISPR arrays

The CRISPR arrays of NZ_CP041636_3

>merge|NZ_CP041636|3|3736247-3736508|PILER-CR
GACCTGCGTCGAGGTCAGCGAGCCGAGCTGCGTCGAGCTCAGTTCACTGACATCGGTGCTTTCCAGCGCGCCGATCTGCGTCGTGGTCAGCGCCTTGAGCTGAGCCGCCGACAGCGACTGAACCTGTGTGGTGACCAGCGCATTCAGGTCGGTGGTCTCAAGCGCACCGACCTGCGTCGTGGTCAGCGCCTTGACCTGCGTCTCCGTCAGGTCCGCGATGTCAGTCGTCTCAAGCGAGGCGATCTGCGTCGTGGTCAGAGCC

>NZ_CP041636|3|1|3736247-3736508|PILER-CR
GACCTGCGTCGAGGTCAGCGAGC	CGAGCTGCGTCGAGCTCAGTTCACTGACATCGGTGCTTTCCAGCGCGCC
GATCTGCGTCGTGGTCAGCGCCT	TGAGCTGAGCCGCCGACAGCGACTGAACCTGTGTGGTGACCAGCGCATTCAGGTCGGTGGTCTCAAGCGCACC
GACCTGCGTCGTGGTCAGCGCCT	TGACCTGCGTCTCCGTCAGGTCCGCGATGTCAGTCGTCTCAAGCGAGGC
GATCTGCGTCGTGGTCAGAGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041636.1|WP_144258094.1|3718738_3719986_-|integrase-arm-type-DNA-binding-domain-containing-protein	unknown	unknown	gnl|CDD|271182
NZ_CP041636.1|WP_144258108.1|3751766_3752378_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|379312
NZ_CP041636.1|WP_144258091.1|3716876_3717644_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP041636.1|WP_144258095.1|3720215_3721082_-|FkbM-family-methyltransferase	unknown	unknown	gnl|CDD|377448
NZ_CP041636.1|WP_144258097.1|3721427_3729998_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP041636.1|WP_144258090.1|3716367_3716880_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP041636.1|WP_144258089.1|3716122_3716371_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|378935
NZ_CP041636.1|WP_144258109.1|3752385_3753315_-|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|182990
NZ_CP041636.1|WP_144258100.1|3741061_3742003_-|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl|CDD|187541
NZ_CP041636.1|WP_144258101.1|3742124_3743594_-|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NZ_CP041636.1|WP_144258096.1|3721141_3721348_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP041636.1|WP_144258106.1|3748471_3749746_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|366149
NZ_CP041636.1|WP_144258092.1|3717652_3717856_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|378935
NZ_CP041636.1|WP_144258102.1|3743721_3744573_-|TSUP-family-transporter	unknown	unknown	gnl|CDD|376667
NZ_CP041636.1|WP_144258105.1|3746870_3748130_-|MFS-transporter	unknown	unknown	gnl|CDD|341030
NZ_CP041636.1|WP_144258103.1|3744711_3745389_-|PAS-domain-containing-protein	unknown	unknown	unknown
NZ_CP041636.1|WP_144258098.1|3730041_3732096_-|glycosyl-transferase	unknown	unknown	gnl|CDD|226428
NZ_CP041636.1|WP_144258104.1|3745565_3746816_-|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl|CDD|143636
NZ_CP041636.1|WP_144258107.1|3749748_3751716_+|glycosyltransferase	unknown	unknown	gnl|CDD|274400
NZ_CP041636.1|WP_144258093.1|3718119_3718644_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP041636.1|WP_144258094.1|3718738_3719986_-|integrase-arm-type-DNA-binding-domain-containing-protein	gnl|CDD|271182	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.13118e-45
NZ_CP041636.1|WP_144258109.1|3752385_3753315_-|LysR-family-transcriptional-regulator	gnl|CDD|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	1.04877e-68
NZ_CP041636.1|WP_144258095.1|3720215_3721082_-|FkbM-family-methyltransferase	gnl|CDD|377448	pfam05050, Methyltransf_21, Methyltransferase FkbM domain. This family has members from bacteria to human, and appears to be a methyltransferase.	1.10304e-23
NZ_CP041636.1|WP_144258089.1|3716122_3716371_-|helix-turn-helix-domain-containing-protein	gnl|CDD|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.37672e-07
NZ_CP041636.1|WP_144258100.1|3741061_3742003_-|NAD-dependent-epimerase/dehydratase-family-protein	gnl|CDD|187541	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs. UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
NZ_CP041636.1|WP_144258101.1|3742124_3743594_-|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	4.52189e-58
NZ_CP041636.1|WP_144258107.1|3749748_3751716_+|glycosyltransferase	gnl|CDD|274400	TIGR03030, Cellulose_synthase_UDP-forming, cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.	1.60751e-102
NZ_CP041636.1|WP_144258106.1|3748471_3749746_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl|CDD|366149	pfam00529, HlyD, HlyD membrane-fusion protein of T1SS. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD and HlyB are inner-membrane proteins and specific components of the transport apparatus of alpha-haemolysin. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.	2.66265e-13
NZ_CP041636.1|WP_144258092.1|3717652_3717856_-|helix-turn-helix-domain-containing-protein	gnl|CDD|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	9.45272e-06
NZ_CP041636.1|WP_144258102.1|3743721_3744573_-|TSUP-family-transporter	gnl|CDD|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	6.07383e-24
NZ_CP041636.1|WP_144258105.1|3746870_3748130_-|MFS-transporter	gnl|CDD|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.96705e-92
NZ_CP041636.1|WP_144258108.1|3751766_3752378_+|methyltransferase-domain-containing-protein	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	8.80997e-08
NZ_CP041636.1|WP_144258098.1|3730041_3732096_-|glycosyl-transferase	gnl|CDD|226428	COG3914, Spy, Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP041636.1|WP_144258104.1|3745565_3746816_-|adenylate/guanylate-cyclase-domain-containing-protein	gnl|CDD|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	5.64037e-40

Protein sequences

>NZ_CP041636.1|WP_144258098.1|3730041_3732096_-|glycosyl-transferase
MSSSHFESLVATLAERPMPITELIDQAARLQTSGEADKAILLYRLWDKCNPTDPFRYVAGFNLGTLLSARGDLPAAKAVYEETVTANPDFYPAYINLGNVLERMGNANAAVNQWNLIVQRLATLTAPAIEHKKTAYKQIGRVLESNLQHASCEAVLRQGLTLDPKQNDVAQHFLSQRMILNKWPVVEPWEGVTRMDLMKGFSPLSSGAYSDDPLFQLGGAWAYNRGIGDPSLNGEYLWQTTARKPSKRLRIGYLSSDLREHAIGFLMSELFELHDREKVEVFAYYCGIKTDDPTKRRINAAVEHWIDVSDMDDRAAAERIAADNIDILVDVNGYTRDARTKALSYRPAPVIVNWLGYPGSMASPYHQYIIADEWLIPKDFEVYYTEKVARLPCYQPTDRKRVIATEQPTRADAGLPEDAVVFCCFNGAHKLRKLTFDRWMQILANVPNSVLWLLGSSDVTHETLREGAKARGISPDRIIFAAKQPNPRHLARYPLADLFLDTFPYGAHTTASDALWMGVPVLTFSGRGFASRVCGSLVQAVGMPEMICESPEDYVKKAIALGNDRAALKKCRDKLAKVRDTSVLFDMNGLARSLEGLYQQMWQDFEKGAIPVPDLANLDLYHELSCEEDHEAQEMLAKDNFNGFYQAKIAARHKFRPVPEDRRLWTAKVIKATEQAYMGKKRAS
>NZ_CP041636.1|WP_144258097.1|3721427_3729998_-|hypothetical-protein
MSVSELTSSGIKALTLAQLRALTSTDIQSLDSTQIVALNTGQVAQLLSTQIGYFNEDQMVFNAAQIAVFSSAQIQALSTKILEFDSTQMQALSGTQIRSLNTTQVGALRVEEFDELTAAQLAQVGTGQLRLLSTTTLNDLTTSHFKNFASTQIGALTTTQFKLLVPDILSVLSSSQVKGMSATQMGALDQAQFQAFSNSVLGALASTQLTGISTTNLSALEETQAQALTSTQLRALSTTQIRGLLAADLDEFTTTQFGQLTATQIGALTTTQLDGISVETIGALNATQAKGLTTTQIGALSETNVEALATSALAALSTTQLRALSTDGLKVLTATQTAALTTTQVANLTTTQIAALDSAALTATQFKALTSSQIKVLSTETIESLSTTQVSNMTSTQLGALTTAQLDVLVGEAFGTLTSTQVKGLTTTQVASLEDTQVAALTNVALSGLTAAQIGAVSTTALNFLDATQVQALTTTQVKGFTTTQIDAFDSADVGDLTVAQLSALSTTQLRSLATDDLNNLSSAQIGALSSGQIGGLTTTQISGWVSEQIGLLTATQFAGLSTTQIKAIDGLTNTQVLNLTAAQIGVLTTTQIDALDQDVFAGLSSTQVKAMTTTQIASLEGSQVAALTTAAISALASTQIAALTTSAINELDTTQTRALTATQIAALTTTQIAALDTADVADLTTTQLKALSVTQLKALTSTNLSQLDTTQFQALSTAQIKALTTTQIAGLSETDVDELSSTQFAALSTTQIAAMNSTALSDLTSTRLQSLTASQISTLSTTLLDSLDADEIALLTSTQAKGLTTTQIASLDETQITALSSTVLAALSSSQIGALITTALNALSETQSAALTATQLKGLTTTQVAALDSADVAELTVTQLKSFTTTQLRALSSDNLATLTSTQIQVLSTAQLQGLTTTQLNDLAAVEFADFNTTQIAGLSTTQIANLSNTNIDGLSSAQRQALTATQIASLTTTQIDGLSDAVFAELTSTQVKGLTSTQIGSLETTQFGAISTAAISGLTSAQISGLTATLIDALSTDALGALSATQIRGFTTTQVGALTSSQVGVLSTAALAGFTVAQIKALSTEALNALDTTQSKALGATQIAALTTTQIAALDTADVADLTTTQIKALSVTQIKALTDTNLSALDTTQAQALTTLQLQALTTTQLNTLTSDDLRELSETQIKGLSTTQIKGLTTTTLNELETTQVQALAVAQIGALTTTQIASLDDDAFSALTATQIKGLTAAQLGALSDEQFALLTTTTIGGLTASQIGGLTSTQLNSLDTATVSALTSTQIKGLTTTQIKALESTQVSAFSSSALTGLAGTQIAALSTTALIALDTTQSKALAATQIAALTTTQISSLETTDVADLTTTQLKALTATQIKSLNSDGLAALETTQVQALSNQQIQALTTTQLNDLIDADVAELSTSQVAALSVTQIKGLSDTVIGFLTTSQVKALAASQISALGTTQLDALTSTVIAELSTTQVKALTTTQIASLDETQFSGLTTTAIGGLTSAQIGSLSSTLIGALSTEALGVLTSTQIRGLTTTQVGALLEDQVKALTGTALTGLVSSQIAALSTEALIALDTTQSKALLATQIAALTTTQINALDVDSIADLTVTQIKSLTATQLKGLTSESISALSETQAQALTAAQLKALTTTQIANFAASDLEELTSTQIGALSTAQISSIDAAVLETLTSAQVGGLTALQIAALTTTQLDSANETLLGALNVTQVKGLTTTQIASLEDTQIALLSGTAISGLTGSQLGALTSTALNSLDTTRMQSLTASQIAGLTTTQINALAEEDIAELSTTQIKALTATQLKSLTSENLAALTETQAQALTTAQVQALTTTQISGLSSEDLGELTSTQFGSLNTTQIRAFTDGAIENLTETQVGALAATQIGALTTGQLDAITSEVFAALTSTQTKGLTSTQIGSLDNDQFSALSSTAIANLTALQIGGLTSTQLDTLDSTVFAAFTSTQIKGLTTTQVAALKDTQVEGLSTAALAGLTAAQIKALATSTLNALSSTQAKSLAGTQIAALTTTQIASLDSLDVADLTTTQIKSLTTLQLRALTSTNLSELNTTQTSALSAAQIAGLATTQVAELTTTDIGELSLTQIKALTASQVAALEQEDLEALDTTQFQALSALQLKALTTTQIAGLESTDLLDLTSTQLAGLTTLQVKAINETAIAELTTTQVGGLTALQLGALTTTQLGALSTTAFTALTATQIKGLTTTQFGSLDSTQITALSTTTLSGLAATQIAALSTEALNELDTAQTRALTTVQIAGLTTTQIAGLRSEDVADLTVTQLKAVTVTQIKSLSTENLSQLDETQFQALSSAQLRALTTTQLNGLLAADLNELTATQFGTLTTTQIKGLSTTLLPDLDETRIAALVSTQIGALTTTQIDELNTTVFAALTSTQIKGLTSTQIGSLSTEQFSELSTTTIANLAATQLSGLTTTQIENLDTAVFGALTATQVKGLTTTQLGALSTQITALSTSALAGLTAAQIGSLTTTAFNALDETQTQALLGSQIAALTTTQIEGLEETDIAELSSTQIKSLTATQLQTLSSTNLKHLDTTQAQALTAIQLRGLTTTQINQLDPEDFNELSSTQLGSLSTTQAAALSTTNLAQLDTTRVAGLTSQQIGALTTTQLDALTADQFGVLSLTQARGLTATQIGTLESTQVEALTSTAVGGLLATQIAALTTTSLNALDTDRLGVLTSAQVKALTTTQLGALDSTQTVALSTTALAGLSASQIGALTETAFNGLDAAQVGVLTAAQMTGLTLTQVGALEEIDIDELSTTQLAAISLTAIVGLTTTSISSMTTTQANALTQAQVELFGDEQIEAWLLAIG
>NZ_CP041636.1|WP_144258096.1|3721141_3721348_-|hypothetical-protein
MSEDFRSDQGLAPDKTAGLLFRFHGRRALRIAAHRASMLAEGGDRDGALEWLRISEAVRDILQRETKQ
>NZ_CP041636.1|WP_144258095.1|3720215_3721082_-|FkbM-family-methyltransferase
MAIPGSFHALTSSSVRVKIVDIGANPLDAVPQYNTLLRGGHADIIGFEPNTDALAKLNGMKGPNETYLPNAIGDGKRHTLNLCASSGMTSLLTPNTEVLNLFHGFPNWGQVVSKIEVETTRLDDIPETEGIDFVKIDIQGAELMVFQNATKRLADALVIQTEVEFLPLYVDQPLFGDVDVFLRSQGYAFHRFFPTVSRTIVPMLVQQDIYAGLSQTVWADAVYVRNFTRLSRLSPRQLLAMAAILHDCYQSYDLVLHILLEHDRRTGEKMAPTYMTGLTGQAAAPAAG
>NZ_CP041636.1|WP_144258094.1|3718738_3719986_-|integrase-arm-type-DNA-binding-domain-containing-protein
MGTRKKERLSAVGIGKKPPGFHADGWGLYLRVTDAETRSWIFRYRMAGRTTPRDMGLGPWPVVSLAEARAEALRLQRLKRQGIDPIGAARAERAANAAQNAKAMTFEEAASRYVAAHAAGWRSAKHAKQWDATLRLYAYPRFGKVQVASIDTAMVINALEPLWAKKTVTASRLRGRIAAVLDWATARGLRSGENPARWQGHLQNLLPARGRVKRTQHHAALPYADIGAFVAKLRAQDGEAARALEFTIMTAARTGEALGAVWAEIDLKAAVWIVPPEKIKAGKEHRVPLCARAVEILRQTPEADRKGYLFRGRAAKAPLSNMSMLMLLKRMGRDDLTVHGFRSCFRIWAAEQTNFAREVAEQALAHAIPDKVEAAYRRTDLFDRRRQLMDAWAKFIDASKAKGGKVIQIGARQRR
>NZ_CP041636.1|WP_144258093.1|3718119_3718644_-|hypothetical-protein
MAEQEHKPTTGLQTIRHFLGAIRALNASAGEIVKACGTKASYQETEAPIRAMIAESWSDMTITEAWMLRAAIVEWMAIFQGEEDPPINRVKLGLEQFVVDASATCPRDVVARAHAYGALFGTEEVEPSPEECKGMTYHALEIAQLVYGSSRSRGDTFASWHDNVTRMSASDEAA
>NZ_CP041636.1|WP_144258092.1|3717652_3717856_-|helix-turn-helix-domain-containing-protein
MLDQPLAYSLDKAAQLSGRSRRQLYRHIESGALIARKDGFRTIVLADDLRAWLDALPRLKPSAGGQQ
>NZ_CP041636.1|WP_144258091.1|3716876_3717644_-|hypothetical-protein
MAGYFLMQRGWQDHPAWRGEAFSRAQAWAWLIEEARWRPTRISIAGKTVELQRGELSHSIRFMAERFGWGKGVVERFIGRLKTETLIRTRTETGQLIITICNYDEMQTARSEGETAPETAPETPAGQHRDSTGTKKKEGNTGNEGNADLDAAVAAWNQLADEQSLARVQKLTDSRRAKLRKRIAEAGGLEGWRIALGKVRANRWMLGSNKDGWRASFDFLLQPESFTKLMEGGYDRAAGQRGGSGFHQMMEREFQ
>NZ_CP041636.1|WP_144258090.1|3716367_3716880_-|hypothetical-protein
MNQVAIQGSQALFQALHMEDTAGNWLQPTAPSPAMLAQARAILADFPARLAPAEPAAVRKWLISLGALCAGRMPLDEAERRVAAYVALIEQPAGVFTKNSLARVAGAFQWFPAFAELKPALDAEALRLRKEYQRLQRLLQPPAITAGPRLPPSAESIAARARAMQEAGLA
>NZ_CP041636.1|WP_144258089.1|3716122_3716371_-|helix-turn-helix-domain-containing-protein
MTSTDAPLSPEQLAKRWGVSPRHVRGMIARGELKAFKLGAKIWRIAAVEVARVEALIGNPEPPATGDADASIDVARQARRLK
>NZ_CP041636.1|WP_144258100.1|3741061_3742003_-|NAD-dependent-epimerase/dehydratase-family-protein
MRDSGRVLITGGAGFLGSHLCERLIGEGMDVLCVDNYFTGRRANVEALLEHPRFEIMRHDVTFPLYVEVDQIYNLACPASPVHYQHDPVQTTKTSVHGAINMLGLAKRVRATIFQASTSEVYGDPQIHPQTEEYWGHVNPIGLRSCYDEGKRCAETLFFDYHRQHKLKIKVGRIFNTYGPRMHPNDGRVVSNFIVQALKGRDITIYGKGTQTRSFCYVSDLIDGFVRLMATGPEVTGPINLGNPVEFTMLELAELVLKLTGSSSKLIFEPLPSDDPKQRQPDITKAKQALGWEPKVKLEDGLKETIAYFRSIV
>NZ_CP041636.1|WP_144258101.1|3742124_3743594_-|diguanylate-cyclase
MRLVLGGKRVLVATVTLLLLVGFLATSLASYFVSRQSLRDAVIETELPLTSDNIYSEIQKDLIQPIVISSVMATDTFLRDWVLDGEEDPERITQYLHAIKERYSAITSFFVSDRTRVYYHADGILKRVDQNEPRDEWYYRVRDMILPYEINVDPDLANQDTMTIFINYRVMDYSGNFLGASGIGLTVNAVRTLIDDYQSRFGRTVYFADGQGRIVLVGADNSVPESEVMQRGNLGEMYPQWSPRQTRTFEYDYRGSTRFLNVRFIPELGWYLLVEKEADSDVAQIRRALYINLLICIVITALVLLATWLTISRFQRRLEAMATTDKLTGLASRHAYDILIDQALRDARRLNQPLSVVMVDADHFKPINDQAGHLAGDRVLIGIANAIRASLRSSDLICRWGGDEFLVVLRNCDLFNAERLGETIRQTVENAAFTFNGSAIPVTVSVGIAVLRSDDDAETFIGRADVALYRAKQDGRNLMRSDTRMQAAD
>NZ_CP041636.1|WP_144258102.1|3743721_3744573_-|TSUP-family-transporter
MILGIPYPELAMLAVALLAAGAVTGILAGVFGVGGGAVIVPVLYELFTLLGVPEEARMPFCVGTSLAVIIPTSIRSFNAHRAKGMVDMSIVKIWAVPVVIGVLAGGVIARYAPADVFKAVFVIVAGLSAFRLLLGKDSWKLADDMPGNLIMRLYGLVIGVLSALMGIGGGQLSSLFMTFYGRPIHQAVATSSGLGVLISIPGAIGYIYAGWPKAAEFPDVAALQPPLALGYVSLIGFLLFVPTSIWTAPVGARLAHSLPKRKLEILFGLFLATVCLRFVLSFF
>NZ_CP041636.1|WP_144258103.1|3744711_3745389_-|PAS-domain-containing-protein
MQWPAGASSPFPPLKHNPIISAACGNAWLNFNAFRRLALCHAETANRRWDRPSMAPAQDSRRRNSDKPFASDPELKFWSARPRAFAETWRARIPPGLTIPSRQAFAPETLVEFLPYMLIIEMDESRQRYRNRLIGTEVVAHAGRDTTGKWFDEIYSEATQYGHHLAHQWVLQHRRPLRVHGTMAYVDRGYLAVESIVVPVSVNRPDEIEQFMICVAYGDLQKEAP
>NZ_CP041636.1|WP_144258104.1|3745565_3746816_-|adenylate/guanylate-cyclase-domain-containing-protein
MMIPNTDTMPASDVPVAMWLINAGLDDASPEALITDFCARSVEAGIPLQRVFVGMATLHPLLRARGYTWTRDGGLVGNDAMPHRDPNDEPEAWVASPLRHMLSNNVPEMRRLLVGDKAVHDFQVLREFTEQGLSDWFAMAHSFGWTFEDSRHITDRYAGIGMISSFTTAQAGGFTDDQLMRLRRLVRLLALAVKAAMLTQMSRDLTAAYIGGDAAHRVLNGVIRRGQAERIEAVILYADLRGFTALADRLAIEPLVETLNAYFDCLGPAIEDGGGQVLKFLGDGLLASFQLDGRRAGREVGRAALKAAKAALDAVAALNAERAAASLPVLALDIALHEGLVMYGNVGTGARLDFTLIGPTVNEAARLENLCGALDCNLVVSESFARLAGSDTGLVSLGRHTLRGVAEMREVFGLPK
>NZ_CP041636.1|WP_144258105.1|3746870_3748130_-|MFS-transporter
MVATLAPVGALLLSVALLLTGNGLQGTLLPVRANLENFGALSIGVMGSAYYVGFVAGCVLTPKLIRRVGHIRLFTAMVAVASVVPLLHAILVGAPGWWLLRGMTGLCMAGLYLIIESWLNERASPENRGMIFTTYTTVNFSVITLGQMLMLADDPLRFHLFSLASILVSLAAVPVALTRSPQPAPISSARLSLRSLYRVSPVGVAGVLTVGLANGAFWGMAPAFASQMGLTVPQIAWFMSATVIGGALSQWPFGRLSDRMDRRKTILIACGLACSAALLLIFTGFAMPPLMIGAAFLFGVFSFPLYALSAAHANDMAKDVDFVAIAGGLLLINGAGSVVGPMIGGIAMDRFGPLGLFGFTAFVHAAMTVFTLHRMRQRAAPPQEQKTDFVPMPSTAPVRADLDPRSDETASPPERSAAA
>NZ_CP041636.1|WP_144258106.1|3748471_3749746_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MSKIKAKSPTTGRLLRIGLGVFLLALFGYAMIPGVFFSQASVGRVNADLVTLRAPIDGQISFGEAKIGARVTRGQTLAVLRDPPERDVRLANLQAQGAALTERIGGLEQQIAALEPILQRLGGDSRNFRTAVINSLIAQVAEAEARVRQAEANARLLDVQFKRIEPLAEKGYASRADFDRRRAEADVAQADLAAQRKTLDRLRQEREAADRGIYLTDSYNNAPYSQQRRDEVELQRLGLANRKTELDAERAQVERQIEAEQRRRQQAGEASITAPVDGVLWRQLESEGATINSSAPLLQIADCSRIFFEVLRDRRTDETLSIGDSANVEFERNGQMVSHKARLVGMRGDQDGDRREFAISSTGTADQLRWIFAVDFASGARAGNPQTVVMQPEACPIGRVGRLHLSDGFTDRMIRKAGSLLGSL
>NZ_CP041636.1|WP_144258107.1|3749748_3751716_+|glycosyltransferase
MNNLLAAVPGIALLTGAILLLPLFKPHNLLVRRGLILVVLVLSVRYLWWRISETLPPLAQPADFVFGLLFLLLELMLAFSTCICLITFWRHRDNTAMAEQNERKSHHSVDMPAVDVFIPTYNESWEVLERSILGARALDYPNFKVWVLDDTRRDWLRDKCAAMDVRYLRRDDNKGAKAGNLNNALAVSKIETNAPYIMVLDADFVPKRKFLRRVVGFFDDAQVALVQTPQFFFNPNMLQHNFMLSESWVDEQRFFFDTLQPAKDAWDVSYCCGTSFVARRAAIEDIGGYPTETITEDILLSFKLIDAGYVTRYLNEKLSNGLAPETIAEYIKQRSRWGIGAIQSLFVKVGPFGRNNLSLMHRFLFLETANYWLSLPTFCLFGLIAPLLYWYAGISILHADAADYAFHFMPAFFSSTALFVWVSSGRIVPILTDLTEFVCASRVAPSVWSALLFRKVQTFRVTNKGLQTDRVQINWTVMLEAGALFALTAFAVFAFRTSLVEGRLPDGGDPTLYTFWSCWNLLILSLVMLLAVERPRQRREERFDLNEPANMYWKGQRYSTWLLDMSVSGARIDLPPALAVQLRDAEVMIDINEVGPVKAHVTSAGGGLLHLRFDAAGARDAIITKLYTGSYDSVAQQASIGTALGGMFKRAFGWQ
>NZ_CP041636.1|WP_144258108.1|3751766_3752378_+|methyltransferase-domain-containing-protein
MDRKQHWDTVYTTKAATEVSWFQDNPALSLDLIDQSGMPKTAALVDIGGGASRLVDTLLAQNYSDVTVLDIAEPALAASKARLGDQAQRVHWIAADITHWQPARHYAMWHDRAVFHFLTDAADRDAYRRALLAGTASGSQIVIASFAPDGPERCSGLPVMRYAPESLLTELGAEFALRDARREEHHTPGGSIQRFQYSCLLRR
>NZ_CP041636.1|WP_144258109.1|3752385_3753315_-|LysR-family-transcriptional-regulator
MDHSLPSQLPPLDTLRAFEAAARLGSFSAAAEVLNLTHGAISRQVAKLERWLGLKLFLRAARGVKLTPDGDRLYVSTREAFALIGAYSDRWTEPRGTSVVRLSALPSVSSRWLMPRLAKLESGGDAALRILFSVDHRQIDLEEEGIDLALRCGRGEVPGRVSLQLFEEWCFPVASPELAKEIGSGDPKRLLNYPLIHDSSATGWRAWFAEQGLDYRPAAHDRRFEDYSLVLDAAACGLGIALARPPLAQRDLDAGRVVQVDPRIARNSVSYWLDRPPGKLRGAAAELARRLAAEADVTPEALAAFLEAD

Crispr_ID: NZ_CP041636_6

• CRISPR_ID: NZ_CP041636_6
• CRISPR_location: 4046877-4046947
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP041636_6

Consensus_repeat	Method
CAGCGCCTGCACCTGCGCGGTCG	CRISPRCasFinder

spacers of NZ_CP041636_6

>6.1|4046900|25|NZ_CP041636|CRISPRCasFinder
TGAACGCATTCAGGTTGCCGCTGCC

CRISPR arrays and Neighbor proteins around NZ_CP041636_6

CRISPR arrays

The CRISPR arrays of NZ_CP041636_6

>merge|NZ_CP041636|6|4046877-4046947|CRISPRCasFinder
GAGCGCCTGGGCCTGCGTGGTGTTGAACGCATTCAGGTTGCCGCTGCCCAGCGCCTGCACCTGCGCCGAGG

>NZ_CP041636|6|5|4046877-4046947|CRISPRCasFinder
GAGCGCCTGGGCCTGCGTGGTGT	TGAACGCATTCAGGTTGCCGCTGCC
CAGCGCCTGCACCTGCGCCGAGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041636.1|WP_144258382.1|4058355_4059120_-|flagellar-biosynthetic-protein-FliR	unknown	unknown	gnl|CDD|235568
NZ_CP041636.1|WP_144258375.1|4037833_4039048_+|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl|CDD|236226
NZ_CP041636.1|WP_144258388.1|4061260_4061659_+|hypothetical-protein	unknown	unknown	gnl|CDD|274610
NZ_CP041636.1|WP_144258381.1|4057232_4058345_-|flagellar-biosynthesis-protein-FlhB	unknown	unknown	gnl|CDD|235569
NZ_CP041636.1|WP_144258370.1|4032574_4033261_-|RlmE-family-RNA-methyltransferase	unknown	unknown	gnl|CDD|223370
NZ_CP041636.1|WP_144258385.1|4059840_4060251_-|flagellar-basal-body-rod-protein-FlgC	unknown	unknown	gnl|CDD|235556
NZ_CP041636.1|WP_144258378.1|4043557_4044631_-|recombinase-RecA	unknown	unknown	gnl|CDD|236476
NZ_CP041636.1|WP_144258383.1|4059126_4059393_-|flagellar-biosynthesis-protein-FliQ	unknown	unknown	gnl|CDD|235671
NZ_CP041636.1|WP_144258380.1|4054906_4057225_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|237425
NZ_CP041636.1|WP_144258373.1|4036403_4036856_-|cytochrome-c	unknown	unknown	gnl|CDD|376525
NZ_CP041636.1|WP_144258838.1|4033260_4034277_-|Ppx/GppA-family-phosphatase	unknown	unknown	gnl|CDD|223326
NZ_CP041636.1|WP_144258387.1|4060870_4061170_+|hypothetical-protein	unknown	unknown	gnl|CDD|225166
NZ_CP041636.1|WP_144258377.1|4040279_4042925_-|alanine--tRNA-ligase	unknown	unknown	gnl|CDD|234701
NZ_CP041636.1|WP_144258389.1|4061658_4062447_+|flagellar-type-III-secretion-system-pore-protein-FliP	unknown	unknown	gnl|CDD|235566
NZ_CP041636.1|WP_144258384.1|4059516_4059819_-|flagellar-hook-basal-body-complex-protein-FliE	unknown	unknown	gnl|CDD|179101
NZ_CP041636.1|WP_144258376.1|4039070_4040258_-|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl|CDD|237999
NZ_CP041636.1|WP_144258386.1|4060298_4060709_-|flagellar-basal-body-rod-protein-FlgB	unknown	unknown	gnl|CDD|235667
NZ_CP041636.1|WP_144258371.1|4034482_4035502_-|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl|CDD|236880
NZ_CP041636.1|WP_144258374.1|4037085_4037670_+|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl|CDD|129813
NZ_CP041636.1|WP_144258372.1|4035637_4036336_+|cytochrome-B6	unknown	unknown	gnl|CDD|226184

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP041636.1|WP_144258382.1|4058355_4059120_-|flagellar-biosynthetic-protein-FliR	gnl|CDD|235568	PRK05701, fliR, flagellar type III secretion system protein FliR.	9.54996e-51
NZ_CP041636.1|WP_144258375.1|4037833_4039048_+|NADP-dependent-isocitrate-dehydrogenase	gnl|CDD|236226	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase.	0
NZ_CP041636.1|WP_144258388.1|4061260_4061659_+|hypothetical-protein	gnl|CDD|274610	TIGR03500, FliO_TIGR, flagellar biosynthetic protein FliO. This short protein found in flagellar biosynthesis operons contains a highly hydrophobic N-terminal sequence followed generally by two basic amino acids. This region is reminiscent of but distinct from the twin-arginine translocation signal sequence. Some instances of this gene have been names "FliZ" but phylogenetic tree building supports a single FliO family.	0.000392671
NZ_CP041636.1|WP_144258381.1|4057232_4058345_-|flagellar-biosynthesis-protein-FlhB	gnl|CDD|235569	PRK05702, flhB, flagellar type III secretion system protein FlhB.	8.11164e-168
NZ_CP041636.1|WP_144258370.1|4032574_4033261_-|RlmE-family-RNA-methyltransferase	gnl|CDD|223370	COG0293, FtsJ, 23S rRNA methylase [Translation, ribosomal structure and biogenesis].	1.13901e-90
NZ_CP041636.1|WP_144258385.1|4059840_4060251_-|flagellar-basal-body-rod-protein-FlgC	gnl|CDD|235556	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed.	1.72146e-64
NZ_CP041636.1|WP_144258378.1|4043557_4044631_-|recombinase-RecA	gnl|CDD|236476	PRK09354, recA, recombinase A; Provisional.	0
NZ_CP041636.1|WP_144258383.1|4059126_4059393_-|flagellar-biosynthesis-protein-FliQ	gnl|CDD|235671	PRK06010, fliQ, flagellar biosynthesis protein FliQ; Reviewed.	1.11207e-25
NZ_CP041636.1|WP_144258380.1|4054906_4057225_-|PAS-domain-containing-protein	gnl|CDD|237425	PRK13557, PRK13557, histidine kinase; Provisional.	8.04099e-101
NZ_CP041636.1|WP_144258373.1|4036403_4036856_-|cytochrome-c	gnl|CDD|376525	pfam01322, Cytochrom_C_2, Cytochrome C'.	1.38939e-25
NZ_CP041636.1|WP_144258838.1|4033260_4034277_-|Ppx/GppA-family-phosphatase	gnl|CDD|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	7.28562e-99
NZ_CP041636.1|WP_144258387.1|4060870_4061170_+|hypothetical-protein	gnl|CDD|225166	COG2257, COG2257, Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown].	7.62292e-24
NZ_CP041636.1|WP_144258377.1|4040279_4042925_-|alanine--tRNA-ligase	gnl|CDD|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP041636.1|WP_144258389.1|4061658_4062447_+|flagellar-type-III-secretion-system-pore-protein-FliP	gnl|CDD|235566	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed.	1.1688e-112
NZ_CP041636.1|WP_144258384.1|4059516_4059819_-|flagellar-hook-basal-body-complex-protein-FliE	gnl|CDD|179101	PRK00732, fliE, flagellar hook-basal body complex protein FliE.	1.8515e-24
NZ_CP041636.1|WP_144258376.1|4039070_4040258_-|cyclic-nucleotide-binding-domain-containing-protein	gnl|CDD|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	8.82613e-22
NZ_CP041636.1|WP_144258386.1|4060298_4060709_-|flagellar-basal-body-rod-protein-FlgB	gnl|CDD|235667	PRK06004, flgB, flagellar basal body rod protein FlgB; Reviewed.	3.96714e-37
NZ_CP041636.1|WP_144258371.1|4034482_4035502_-|LysM-peptidoglycan-binding-domain-containing-protein	gnl|CDD|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	2.98125e-13
NZ_CP041636.1|WP_144258374.1|4037085_4037670_+|TIGR00730-family-Rossman-fold-protein	gnl|CDD|129813	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. [Hypothetical proteins, Conserved].	5.44628e-54
NZ_CP041636.1|WP_144258372.1|4035637_4036336_+|cytochrome-B6	gnl|CDD|226184	COG3658, COG3658, Cytochrome b [Energy production and conversion].	1.72035e-36

Protein sequences

>NZ_CP041636.1|WP_144258378.1|4043557_4044631_-|recombinase-RecA
MSSPSLRVVEKENMDKGKALEAALSQIERNFGKGSVMKLGQRQSMEVEAISTGSLGLDIALGIGGLPKGRIVEVYGPESSGKTTIALHVVAEAQKKGGTCAFVDAEHALDPSYARKLGVNIEELLISQPDTGEQALEIADTLVRSGAIDVLVIDSVAALVPQAELEGEMGDTHVGLQARLMSQALRKLTASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKIRDEVVGNQTRVKVVKNKVAPPFKVVDFDIMYGEGVSKTGELIDLGVKANVVEKSGSWLSFDSQRIGQGREAAKTFLKENPEVANRIEAAIKANTGIVAAAIDAGPDAGEAEDAE
>NZ_CP041636.1|WP_144258377.1|4040279_4042925_-|alanine--tRNA-ligase
MSSASDVRQAFLDYFAKNGHSVVESSPLVPRNDPTLMFTNAGMVQFKNVFTGQEKRPYTRATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDDAIPLAWNLITKDYGLPKEKLWVTVYHDDDQAFDIWKKIGVPESRIVRIATSDNFWAMGDTGPCGPCSEIFYDHGDKIWGGPPGTPEADGDRYIEIWNLVFMQFEQVTKEQRVSLPKPSIDTGMGLERITAVMQGKHDNYDIDLMRALIEASADASSTDPDGAHKVSHRVVADHLRSSCFLIADGVLPSNEGRGYVLRRIMRRAMRHAQLMGCKEPLMHRLVPTLVSEMGRAYPELGRAEALIAETLKLEETRFKQTLDRGLRLLDEATASMSKGDMLPGETAFKLYDTFGFPLDLTQDALRPRGINVNLDGFQTAMAAQKAEARKAWAGSGEAATEKVWFEIREDKGATEFLGYDTQSAEGRIDAIVVAGQPVNEAKAGTEVAIVLNQTPFYGESGGQQGDSGMITTAGGAKVEISDTQKKLGALHAHLGKVTEGTLKVDDMAILTVDATRRGAIASNHSATHLLHAALRRRLGDHVTQKGSLVSPDRFRFDISHPKAITGAELQAVEAEVNEMIRQNDAVTTRLMTPDEAIAAGAMALFGEKYGDEVRVLSMGKLDDGKDYSTELCGGTHVKRTGDIALFKIVGEGAVAAGVRRVEALTGEAARHYFLEQEGMLQAAADVLKAQPKEVPQRITALIEERRKLERELSELRKQLATGGGSGGPQVKDVNGVKYAARSLDGVPAKDLRGMVDAIKKEIGSGVVALTSVADGKVSVVVGVSNDLTGKINAAELVKIATPLIGGQGGGGRPDFAQGGGADPSGAAKALEAIAEQIGKAA
>NZ_CP041636.1|WP_144258376.1|4039070_4040258_-|cyclic-nucleotide-binding-domain-containing-protein
MSKTDWRRICFDLLADDRRDARIGHRLLSTLIIISVFACAAAIMLVTVPGLDARTVFWCDRLREATDILFTAEYLLRIWIAPAYAHSGRVGATTMRRRYMSSFLGVVDLLVILPFWLNLVVPFPRDLFLATEMFTLFKLARYTPGLPLVAAVLRREARGLTAALGAAGVLLVVASCIMYMLEHDAQPEVFGSIPKALWWGIVTVGSVGYGDMIPITPLGKIFNGVIILIGVGTIAIPAGLLASGFAEEIKRREFMVTWRAVASLPLFHNLDASSIAEIASLLKPQVVPSGTAIVRRDERAEAMFFIMAGEVEVEILPKPVVLGSGQHFGEIALLRRTDRTATVSAITDCRLLALEVTDFQRLLQVHPTIKEHIDRLAAERLEQRKTAEGLSPPAV
>NZ_CP041636.1|WP_144258375.1|4037833_4039048_+|NADP-dependent-isocitrate-dehydrogenase
MAKIKVKNPVVELDGDEMTRIIWKFIKEKLILPYLDVDLLYYDLGVEYRDQTNDQVTIDSAQAILKHGVGVKCATITPDEQRVTEFKLKEMWKSPNGTIRNIIGGTIFREPIICKNVPRLVPHWNDPIVVGRHAFGDQYRATDFRFPGKGTLTIKFVGEDGKIIEKEVFKAPGSGVAMAMYNLDDSIRDFARSSMNYSLVRGWPLYLSTKNTILKAYDGRFKDLFEEVFEKEFADQFKKAGITYEHRLIDDMVACAIKWSGKFVWACKNYDGDVQSDVVAQGFGSLGLMTSVLMTPDGKTVEAEAAHGTVTRHYREHQAGRETSTNPIASIFAWTRGLMHRAKLDNNADLDKFAQTLEKVCISTVEAGFMTKDLAILISKDQPWLTTQKFLDKIDENLKTALAA
>NZ_CP041636.1|WP_144258374.1|4037085_4037670_+|TIGR00730-family-Rossman-fold-protein
MTAIRSVCVYCGSSLGESNVYTAQAQILGQRLAENGIRLIYGGGRIGLMGVVADAVMKGGGEVVGIIPNHLHDWEVGHTGLTELHVVDSMHTRKRMMVEMSDAFIALPGGLGTLDEFFEIITWRQLKLHDKPVLVLNTEDYWHPLMALIETVIERGFARRTATTLYTVVEDAEAVIAALLAEPPPEHAARTSKI
>NZ_CP041636.1|WP_144258373.1|4036403_4036856_-|cytochrome-c
MATWHKAVLAATLGLAMMSVGGLAFAQSADDHIKARKDGFQVFRVSAGAIKKVVDDNSAPSGAVAAAEAIAQQAARQLQHFPPGSDKGNTKAKPEIWANWAQFEAGMKDLEGKATAVAAAGKAGDAAALKAAFGAMGGACGTCHKAFRAD
>NZ_CP041636.1|WP_144258372.1|4035637_4036336_+|cytochrome-B6
MTIETPGIASGSAPVQARITVWDLPTRLFHWALVLLVIAMVWTGWTGKLELHMTLGQAVLSLVLFRLVWGFTGNRYARFTEFVTGPISCLRYLGSLFSSSSGQHVGHNPAGGYAVLAMLVLLAVQAGSGLFTSDDIFTDGPLFSKVSSATGSLLSTVHRRTIWILLGVIGLHLLANVFYLVVKKNDLISPMVTGRKLAPAAADAGRGGHPLLALVILAVCAAIVFGGIALVK
>NZ_CP041636.1|WP_144258371.1|4034482_4035502_-|LysM-peptidoglycan-binding-domain-containing-protein
MRGSRFFFILLAAAVLGILAVIFFGADPNKRGMTPTANIPPPPVPAAPVAPSPDSVAKAPPSFDVVRISRNCTSVFAGRAMAGSVVVVKTGQRELGRVTADTRGEWVLVPDLPLERGNQEFTLESQMQGQEPIKAEANVVAVVPECQPGEGGEQAIAVLTPLKGASRLLQRPDGPLDPARKGLALDAIEYDQAGNLILSGRAQPGSTVQIYLNNEPIGVATADDKGTWRMRPDKAVDPGIYSLRVDQVEQAGGKVASRLEMPFSRARPEDVKFDASGNSIIVQPGNSLWRIARQVYGQGPRYTEIYRANQSQITDPDMIYPGQVFAVPGHNTPGGKSTN
>NZ_CP041636.1|WP_144258838.1|4033260_4034277_-|Ppx/GppA-family-phosphatase
MQAASEPAPVYAAIDLGTNNCRLLIARPVRDGFRVIEAFSRIVRLGEGLSVSGRLSDAAMARTIEALKICSEKMARRGVSSARAVATEACRRAANGNEFLHEVKTATGISLDIISTAEEARLALNGCAPLLEPPHREAIVFDIGGGSTEILWARLLGGGRTDVIDWISLPFGVVNLTERFGPGDIQSGSYAQMIDLVADELRPFEVKHALSQKLLSGQIQVLGTSGTVTTLAGVHLNLPRYERRYVDGCWLEFPTVIEQSRRLASISVPERALHPCIGEERADLVVAGCAILEALYRFWPATRLRVADRGVREGVLVELMGQRRQIGDGGRHNGWRRR
>NZ_CP041636.1|WP_144258370.1|4032574_4033261_-|RlmE-family-RNA-methyltransferase
MAQPPRKAGVKVRVKTARGRTVGQAKWLRRQLNDPYVAAAKVDGWRSRAAFKLIELDEKYKLLKPGMRVVDLGAAPGGWTQVAVKRVKSAEGEKGRGFVLGVDINPVDPIVGATLMQQDFLEEGADLKIIEALGGKADLVLSDMAAPATGHRQTDHIRIMLLCELALDFARRVLNPGGVFLAKVLRGGSENEMLNTMKRDFRSVRHVKPPASRADSAESYVIATGFRG
>NZ_CP041636.1|WP_144258380.1|4054906_4057225_-|PAS-domain-containing-protein
MALSFASLIGSPRRRAAWMLAEASPFARAITRGHQLLADNTAYRVLAARLGNEGGHAPDVLLGREIGNAEIIARLQSLLPLGRAVQEDIAIHTATGVVSLRVTAMQAPGSVSGGRNWVIWDIQEVADNAAALVAVRQQRDELAAFIDNAPVGLYSVAPDGRFLFANRTFAAWLGGVPEQLVGSDLLLSDVLSHGEARENETMTPDWPGGEAKLRPLPAEDTEPDHPARLRLVSVSQTVVPDVDGNPLRYSAVVHDLGLELRQRGTLRPVEAEFRRFFDQAPIGILVLDSAGTIREANAAFAQLCGRDDWLGQRLAAMVREEDALALARHLVALRRGEIFSRALEVRLDGPRERVVEVFAASSAEREDGQSAQLVYLVDTTDQRSLQTQFHQSQKMQAVGQLAGGIAHDFNNLLTAMIGFCDLLLQRHQPGDQSFADIMQIKQNASRAANLVRQLLAFSRQQTLVPKVLDITDVLADLRNLIGRLIGETITLKMVHGRDLGLVKVDQGQLEQVIINLAVNARDAMADGGELKIRTLNHSVAQPTQLGAEIIPAGDYVAIEVTDTGHGIAPENMAKIFDPFFTTKAVGAGTGLGLSTVYGIIKQTGGFIHVESEPGEGACFRLYLPRHRPNAEELPAGREDARPDSRDLTGQGLVLLVEDEDAVRAFAARALRNKGYTVIEAASGEQALALPPEQLDRVELLISDVVMPNLDGPTLAAQLRSRRPDLKILFISGYAEDSLRNNMAKSADVNFLPKPFSLAQLAGKVKEVMDGTA
>NZ_CP041636.1|WP_144258381.1|4057232_4058345_-|flagellar-biosynthesis-protein-FlhB
MSEDADPESKTEDASGKRLQDAADKGNVAKSMEIGYWFTFLAASISLWMLADSLGSRVVNSTTMFFAQPHLIPVDPSQLARIAVDVSMNIALALSPIIGLFVLASVAASLLQNPFHVSLEKIKPDFAKLSPMAGLKRMFGMQNFVEFVKNMIKISVIGGILLTILIPELDELEVLIDLDLSVVLPLCLKIVAKVVGALLGIMFVVAAADYLYQRFNYMKNLRMTKQEVKEEYKEIEGDPHIKARLRQLRMQRARQRMMTAVPKASVIVTNPTHFAVALKYEQGQSEAPIVVAKGADNIAFRIRELATKHDIPIVENPPLARALYKVDLEQEIPVEHFRAVAEVISYIMKLKDGIQSKYEPKVATIETAEE
>NZ_CP041636.1|WP_144258382.1|4058355_4059120_-|flagellar-biosynthetic-protein-FliR
MLQDIVAGNVYAFLLIFSRLGSTMMALPGVGENSVPARFRLTIALLISGLVVPVIGPTLPPLPAQPIHVAFLVITEIGFGLALGIMIRLLMSAMHVAGTVIALQAGLASAMLFDPAQGGQSVVVSSALVFMGIVLVFVTDLHLLGLQAAFDSYTMFPPMQAPAFGDFATTATRMVSEGFALGMRMAAPFIVYGIVFNVALGLLNRLMPSLQIFFIMQAPQIAFSLVVLGLSLGAIGLAFTGHLEEHIAQFLVKR
>NZ_CP041636.1|WP_144258383.1|4059126_4059393_-|flagellar-biosynthesis-protein-FliQ
MTAVEVTDVMREAIWVLLKVAGPAMIVSLVIGLIISLFQAVTQLQEPTLTFVPKIVAIFGALIITMPFMIGTMVTFMEHLAQRIAGLE
>NZ_CP041636.1|WP_144258384.1|4059516_4059819_-|flagellar-hook-basal-body-complex-protein-FliE
MADLRIADTLGLGKVLGGADAGKIKGDGGTAFGEMLSEALQSTVDAQKTAEATSVKAVNGKADVTDVVTAVTNAEVALDTVVAVRDRVINAYQEIMRMPI
>NZ_CP041636.1|WP_144258385.1|4059840_4060251_-|flagellar-basal-body-rod-protein-FlgC
MELKNAMQISASGMRAQGERLKIISENLANSDSLGKTPGSDPYRRKVVSFKSELDRAMGANLVKAQKPQQDRSDFELKYDPGHPSANADGYVKMPNVKSVIEMADMREAQRTYEANLNVIDSAKAMLNRTVDLLRQ
>NZ_CP041636.1|WP_144258386.1|4060298_4060709_-|flagellar-basal-body-rod-protein-FlgB
MDLDKINVIKAITRRMDWLGERQRVLAENVANADTPGYKPKDLKQVSFSELVRGSQLSGGVAATQAGHFRGLGGRSSDHWRNSTAKGYETSPNGNSVNLEQQMMNVAETQAEHGLMTNLYRKQVGMLRKALGNRQG
>NZ_CP041636.1|WP_144258387.1|4060870_4061170_+|hypothetical-protein
MADKPPQNTGKPPKQKAVALRYETEHEEAPRVVASGEGFIAEQIVRIALDNGITVHKDSDLVEILSKLDIDALIPIEAFAAVAEILSYIYRTQGREPGS
>NZ_CP041636.1|WP_144258388.1|4061260_4061659_+|hypothetical-protein
MDNINFTQVALAFGALLLLLALFYYGARALSGATSRGAKWRAGQRIGVVENAPVDGTRRLVLVRRDDTEHLLLVGTHGDLVIESNIPITKNGSGETTAAAAARRPSSSVATEDSGGWPTLRVPGRDKPGQDR
>NZ_CP041636.1|WP_144258389.1|4061658_4062447_+|flagellar-type-III-secretion-system-pore-protein-FliP
MRKIARQKLAALWADCRRALPWSLGLGLVAILMMVPAALAQSVNIDLGQGGTISGRVIQLVALTTVLALAPSILVVITSFVRIVVVLSILRSAMGTQSTPPNTVLMSLALFLTFFIMQPYLERAYNDGIQPLIEEQIDERTAFDRSIAPFHEFMRSHVREKDLALFSGFANAPIPASAEQIQLRVLIPSFIISELKRAFEIGFLLFIPFIVVDMVVASVLMSMGMMMLPPVMISLPFKLIFFVLVDGWNLVCAALVESFIAR

Crispr_ID: NZ_CP041636_5

• CRISPR_ID: NZ_CP041636_5
• CRISPR_location: 4046613-4046780
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP041636_5

Consensus_repeat	Method
CAGCGCCTGCACCTGCGCGGTCG	CRISPRCasFinder

spacers of NZ_CP041636_5

>5.1|4046636|49|NZ_CP041636|CRISPRCasFinder
TCAGCGCCGCAACCTGGTTGCCGTTCAGGGCGTTCAGCGCCGTGCTGGT
>5.2|4046708|49|NZ_CP041636|CRISPRCasFinder
CCAGCGCCGCCACATCCGTCGGCGTCAGCGCGCCGACCTGGGTGGCGTT

CRISPR arrays and Neighbor proteins around NZ_CP041636_5

CRISPR arrays

The CRISPR arrays of NZ_CP041636_5

>merge|NZ_CP041636|5|4046613-4046780|CRISPRCasFinder
CAGCGCCTGGATCTGACTGGTGGTCAGCGCCGCAACCTGGTTGCCGTTCAGGGCGTTCAGCGCCGTGCTGGTCAGCGCCGCGATCTGCGTGGTGGCCAGCGCCGCCACATCCGTCGGCGTCAGCGCGCCGACCTGGGTGGCGTTCAGCGTGCCGATCTGCGCGGTGGT

>NZ_CP041636|5|4|4046613-4046780|CRISPRCasFinder
CAGCGCCTGGATCTGACTGGTGG	TCAGCGCCGCAACCTGGTTGCCGTTCAGGGCGTTCAGCGCCGTGCTGGT
CAGCGCCGCGATCTGCGTGGTGG	CCAGCGCCGCCACATCCGTCGGCGTCAGCGCGCCGACCTGGGTGGCGTT
CAGCGTGCCGATCTGCGCGGTGGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041636.1|WP_144258382.1|4058355_4059120_-|flagellar-biosynthetic-protein-FliR	unknown	unknown	gnl|CDD|235568
NZ_CP041636.1|WP_144258375.1|4037833_4039048_+|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl|CDD|236226
NZ_CP041636.1|WP_144258388.1|4061260_4061659_+|hypothetical-protein	unknown	unknown	gnl|CDD|274610
NZ_CP041636.1|WP_144258381.1|4057232_4058345_-|flagellar-biosynthesis-protein-FlhB	unknown	unknown	gnl|CDD|235569
NZ_CP041636.1|WP_144258370.1|4032574_4033261_-|RlmE-family-RNA-methyltransferase	unknown	unknown	gnl|CDD|223370
NZ_CP041636.1|WP_144258385.1|4059840_4060251_-|flagellar-basal-body-rod-protein-FlgC	unknown	unknown	gnl|CDD|235556
NZ_CP041636.1|WP_144258378.1|4043557_4044631_-|recombinase-RecA	unknown	unknown	gnl|CDD|236476
NZ_CP041636.1|WP_144258383.1|4059126_4059393_-|flagellar-biosynthesis-protein-FliQ	unknown	unknown	gnl|CDD|235671
NZ_CP041636.1|WP_144258380.1|4054906_4057225_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|237425
NZ_CP041636.1|WP_144258373.1|4036403_4036856_-|cytochrome-c	unknown	unknown	gnl|CDD|376525
NZ_CP041636.1|WP_144258838.1|4033260_4034277_-|Ppx/GppA-family-phosphatase	unknown	unknown	gnl|CDD|223326
NZ_CP041636.1|WP_144258387.1|4060870_4061170_+|hypothetical-protein	unknown	unknown	gnl|CDD|225166
NZ_CP041636.1|WP_144258377.1|4040279_4042925_-|alanine--tRNA-ligase	unknown	unknown	gnl|CDD|234701
NZ_CP041636.1|WP_144258389.1|4061658_4062447_+|flagellar-type-III-secretion-system-pore-protein-FliP	unknown	unknown	gnl|CDD|235566
NZ_CP041636.1|WP_144258384.1|4059516_4059819_-|flagellar-hook-basal-body-complex-protein-FliE	unknown	unknown	gnl|CDD|179101
NZ_CP041636.1|WP_144258376.1|4039070_4040258_-|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl|CDD|237999
NZ_CP041636.1|WP_144258386.1|4060298_4060709_-|flagellar-basal-body-rod-protein-FlgB	unknown	unknown	gnl|CDD|235667
NZ_CP041636.1|WP_144258371.1|4034482_4035502_-|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl|CDD|236880
NZ_CP041636.1|WP_144258374.1|4037085_4037670_+|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl|CDD|129813
NZ_CP041636.1|WP_144258372.1|4035637_4036336_+|cytochrome-B6	unknown	unknown	gnl|CDD|226184

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP041636.1|WP_144258382.1|4058355_4059120_-|flagellar-biosynthetic-protein-FliR	gnl|CDD|235568	PRK05701, fliR, flagellar type III secretion system protein FliR.	9.54996e-51
NZ_CP041636.1|WP_144258375.1|4037833_4039048_+|NADP-dependent-isocitrate-dehydrogenase	gnl|CDD|236226	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase.	0
NZ_CP041636.1|WP_144258388.1|4061260_4061659_+|hypothetical-protein	gnl|CDD|274610	TIGR03500, FliO_TIGR, flagellar biosynthetic protein FliO. This short protein found in flagellar biosynthesis operons contains a highly hydrophobic N-terminal sequence followed generally by two basic amino acids. This region is reminiscent of but distinct from the twin-arginine translocation signal sequence. Some instances of this gene have been names "FliZ" but phylogenetic tree building supports a single FliO family.	0.000392671
NZ_CP041636.1|WP_144258381.1|4057232_4058345_-|flagellar-biosynthesis-protein-FlhB	gnl|CDD|235569	PRK05702, flhB, flagellar type III secretion system protein FlhB.	8.11164e-168
NZ_CP041636.1|WP_144258370.1|4032574_4033261_-|RlmE-family-RNA-methyltransferase	gnl|CDD|223370	COG0293, FtsJ, 23S rRNA methylase [Translation, ribosomal structure and biogenesis].	1.13901e-90
NZ_CP041636.1|WP_144258385.1|4059840_4060251_-|flagellar-basal-body-rod-protein-FlgC	gnl|CDD|235556	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed.	1.72146e-64
NZ_CP041636.1|WP_144258378.1|4043557_4044631_-|recombinase-RecA	gnl|CDD|236476	PRK09354, recA, recombinase A; Provisional.	0
NZ_CP041636.1|WP_144258383.1|4059126_4059393_-|flagellar-biosynthesis-protein-FliQ	gnl|CDD|235671	PRK06010, fliQ, flagellar biosynthesis protein FliQ; Reviewed.	1.11207e-25
NZ_CP041636.1|WP_144258380.1|4054906_4057225_-|PAS-domain-containing-protein	gnl|CDD|237425	PRK13557, PRK13557, histidine kinase; Provisional.	8.04099e-101
NZ_CP041636.1|WP_144258373.1|4036403_4036856_-|cytochrome-c	gnl|CDD|376525	pfam01322, Cytochrom_C_2, Cytochrome C'.	1.38939e-25
NZ_CP041636.1|WP_144258838.1|4033260_4034277_-|Ppx/GppA-family-phosphatase	gnl|CDD|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	7.28562e-99
NZ_CP041636.1|WP_144258387.1|4060870_4061170_+|hypothetical-protein	gnl|CDD|225166	COG2257, COG2257, Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown].	7.62292e-24
NZ_CP041636.1|WP_144258377.1|4040279_4042925_-|alanine--tRNA-ligase	gnl|CDD|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP041636.1|WP_144258389.1|4061658_4062447_+|flagellar-type-III-secretion-system-pore-protein-FliP	gnl|CDD|235566	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed.	1.1688e-112
NZ_CP041636.1|WP_144258384.1|4059516_4059819_-|flagellar-hook-basal-body-complex-protein-FliE	gnl|CDD|179101	PRK00732, fliE, flagellar hook-basal body complex protein FliE.	1.8515e-24
NZ_CP041636.1|WP_144258376.1|4039070_4040258_-|cyclic-nucleotide-binding-domain-containing-protein	gnl|CDD|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	8.82613e-22
NZ_CP041636.1|WP_144258386.1|4060298_4060709_-|flagellar-basal-body-rod-protein-FlgB	gnl|CDD|235667	PRK06004, flgB, flagellar basal body rod protein FlgB; Reviewed.	3.96714e-37
NZ_CP041636.1|WP_144258371.1|4034482_4035502_-|LysM-peptidoglycan-binding-domain-containing-protein	gnl|CDD|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	2.98125e-13
NZ_CP041636.1|WP_144258374.1|4037085_4037670_+|TIGR00730-family-Rossman-fold-protein	gnl|CDD|129813	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. [Hypothetical proteins, Conserved].	5.44628e-54
NZ_CP041636.1|WP_144258372.1|4035637_4036336_+|cytochrome-B6	gnl|CDD|226184	COG3658, COG3658, Cytochrome b [Energy production and conversion].	1.72035e-36

Protein sequences

>NZ_CP041636.1|WP_144258378.1|4043557_4044631_-|recombinase-RecA
MSSPSLRVVEKENMDKGKALEAALSQIERNFGKGSVMKLGQRQSMEVEAISTGSLGLDIALGIGGLPKGRIVEVYGPESSGKTTIALHVVAEAQKKGGTCAFVDAEHALDPSYARKLGVNIEELLISQPDTGEQALEIADTLVRSGAIDVLVIDSVAALVPQAELEGEMGDTHVGLQARLMSQALRKLTASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKIRDEVVGNQTRVKVVKNKVAPPFKVVDFDIMYGEGVSKTGELIDLGVKANVVEKSGSWLSFDSQRIGQGREAAKTFLKENPEVANRIEAAIKANTGIVAAAIDAGPDAGEAEDAE
>NZ_CP041636.1|WP_144258377.1|4040279_4042925_-|alanine--tRNA-ligase
MSSASDVRQAFLDYFAKNGHSVVESSPLVPRNDPTLMFTNAGMVQFKNVFTGQEKRPYTRATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDDAIPLAWNLITKDYGLPKEKLWVTVYHDDDQAFDIWKKIGVPESRIVRIATSDNFWAMGDTGPCGPCSEIFYDHGDKIWGGPPGTPEADGDRYIEIWNLVFMQFEQVTKEQRVSLPKPSIDTGMGLERITAVMQGKHDNYDIDLMRALIEASADASSTDPDGAHKVSHRVVADHLRSSCFLIADGVLPSNEGRGYVLRRIMRRAMRHAQLMGCKEPLMHRLVPTLVSEMGRAYPELGRAEALIAETLKLEETRFKQTLDRGLRLLDEATASMSKGDMLPGETAFKLYDTFGFPLDLTQDALRPRGINVNLDGFQTAMAAQKAEARKAWAGSGEAATEKVWFEIREDKGATEFLGYDTQSAEGRIDAIVVAGQPVNEAKAGTEVAIVLNQTPFYGESGGQQGDSGMITTAGGAKVEISDTQKKLGALHAHLGKVTEGTLKVDDMAILTVDATRRGAIASNHSATHLLHAALRRRLGDHVTQKGSLVSPDRFRFDISHPKAITGAELQAVEAEVNEMIRQNDAVTTRLMTPDEAIAAGAMALFGEKYGDEVRVLSMGKLDDGKDYSTELCGGTHVKRTGDIALFKIVGEGAVAAGVRRVEALTGEAARHYFLEQEGMLQAAADVLKAQPKEVPQRITALIEERRKLERELSELRKQLATGGGSGGPQVKDVNGVKYAARSLDGVPAKDLRGMVDAIKKEIGSGVVALTSVADGKVSVVVGVSNDLTGKINAAELVKIATPLIGGQGGGGRPDFAQGGGADPSGAAKALEAIAEQIGKAA
>NZ_CP041636.1|WP_144258376.1|4039070_4040258_-|cyclic-nucleotide-binding-domain-containing-protein
MSKTDWRRICFDLLADDRRDARIGHRLLSTLIIISVFACAAAIMLVTVPGLDARTVFWCDRLREATDILFTAEYLLRIWIAPAYAHSGRVGATTMRRRYMSSFLGVVDLLVILPFWLNLVVPFPRDLFLATEMFTLFKLARYTPGLPLVAAVLRREARGLTAALGAAGVLLVVASCIMYMLEHDAQPEVFGSIPKALWWGIVTVGSVGYGDMIPITPLGKIFNGVIILIGVGTIAIPAGLLASGFAEEIKRREFMVTWRAVASLPLFHNLDASSIAEIASLLKPQVVPSGTAIVRRDERAEAMFFIMAGEVEVEILPKPVVLGSGQHFGEIALLRRTDRTATVSAITDCRLLALEVTDFQRLLQVHPTIKEHIDRLAAERLEQRKTAEGLSPPAV
>NZ_CP041636.1|WP_144258375.1|4037833_4039048_+|NADP-dependent-isocitrate-dehydrogenase
MAKIKVKNPVVELDGDEMTRIIWKFIKEKLILPYLDVDLLYYDLGVEYRDQTNDQVTIDSAQAILKHGVGVKCATITPDEQRVTEFKLKEMWKSPNGTIRNIIGGTIFREPIICKNVPRLVPHWNDPIVVGRHAFGDQYRATDFRFPGKGTLTIKFVGEDGKIIEKEVFKAPGSGVAMAMYNLDDSIRDFARSSMNYSLVRGWPLYLSTKNTILKAYDGRFKDLFEEVFEKEFADQFKKAGITYEHRLIDDMVACAIKWSGKFVWACKNYDGDVQSDVVAQGFGSLGLMTSVLMTPDGKTVEAEAAHGTVTRHYREHQAGRETSTNPIASIFAWTRGLMHRAKLDNNADLDKFAQTLEKVCISTVEAGFMTKDLAILISKDQPWLTTQKFLDKIDENLKTALAA
>NZ_CP041636.1|WP_144258374.1|4037085_4037670_+|TIGR00730-family-Rossman-fold-protein
MTAIRSVCVYCGSSLGESNVYTAQAQILGQRLAENGIRLIYGGGRIGLMGVVADAVMKGGGEVVGIIPNHLHDWEVGHTGLTELHVVDSMHTRKRMMVEMSDAFIALPGGLGTLDEFFEIITWRQLKLHDKPVLVLNTEDYWHPLMALIETVIERGFARRTATTLYTVVEDAEAVIAALLAEPPPEHAARTSKI
>NZ_CP041636.1|WP_144258373.1|4036403_4036856_-|cytochrome-c
MATWHKAVLAATLGLAMMSVGGLAFAQSADDHIKARKDGFQVFRVSAGAIKKVVDDNSAPSGAVAAAEAIAQQAARQLQHFPPGSDKGNTKAKPEIWANWAQFEAGMKDLEGKATAVAAAGKAGDAAALKAAFGAMGGACGTCHKAFRAD
>NZ_CP041636.1|WP_144258372.1|4035637_4036336_+|cytochrome-B6
MTIETPGIASGSAPVQARITVWDLPTRLFHWALVLLVIAMVWTGWTGKLELHMTLGQAVLSLVLFRLVWGFTGNRYARFTEFVTGPISCLRYLGSLFSSSSGQHVGHNPAGGYAVLAMLVLLAVQAGSGLFTSDDIFTDGPLFSKVSSATGSLLSTVHRRTIWILLGVIGLHLLANVFYLVVKKNDLISPMVTGRKLAPAAADAGRGGHPLLALVILAVCAAIVFGGIALVK
>NZ_CP041636.1|WP_144258371.1|4034482_4035502_-|LysM-peptidoglycan-binding-domain-containing-protein
MRGSRFFFILLAAAVLGILAVIFFGADPNKRGMTPTANIPPPPVPAAPVAPSPDSVAKAPPSFDVVRISRNCTSVFAGRAMAGSVVVVKTGQRELGRVTADTRGEWVLVPDLPLERGNQEFTLESQMQGQEPIKAEANVVAVVPECQPGEGGEQAIAVLTPLKGASRLLQRPDGPLDPARKGLALDAIEYDQAGNLILSGRAQPGSTVQIYLNNEPIGVATADDKGTWRMRPDKAVDPGIYSLRVDQVEQAGGKVASRLEMPFSRARPEDVKFDASGNSIIVQPGNSLWRIARQVYGQGPRYTEIYRANQSQITDPDMIYPGQVFAVPGHNTPGGKSTN
>NZ_CP041636.1|WP_144258838.1|4033260_4034277_-|Ppx/GppA-family-phosphatase
MQAASEPAPVYAAIDLGTNNCRLLIARPVRDGFRVIEAFSRIVRLGEGLSVSGRLSDAAMARTIEALKICSEKMARRGVSSARAVATEACRRAANGNEFLHEVKTATGISLDIISTAEEARLALNGCAPLLEPPHREAIVFDIGGGSTEILWARLLGGGRTDVIDWISLPFGVVNLTERFGPGDIQSGSYAQMIDLVADELRPFEVKHALSQKLLSGQIQVLGTSGTVTTLAGVHLNLPRYERRYVDGCWLEFPTVIEQSRRLASISVPERALHPCIGEERADLVVAGCAILEALYRFWPATRLRVADRGVREGVLVELMGQRRQIGDGGRHNGWRRR
>NZ_CP041636.1|WP_144258370.1|4032574_4033261_-|RlmE-family-RNA-methyltransferase
MAQPPRKAGVKVRVKTARGRTVGQAKWLRRQLNDPYVAAAKVDGWRSRAAFKLIELDEKYKLLKPGMRVVDLGAAPGGWTQVAVKRVKSAEGEKGRGFVLGVDINPVDPIVGATLMQQDFLEEGADLKIIEALGGKADLVLSDMAAPATGHRQTDHIRIMLLCELALDFARRVLNPGGVFLAKVLRGGSENEMLNTMKRDFRSVRHVKPPASRADSAESYVIATGFRG
>NZ_CP041636.1|WP_144258380.1|4054906_4057225_-|PAS-domain-containing-protein
MALSFASLIGSPRRRAAWMLAEASPFARAITRGHQLLADNTAYRVLAARLGNEGGHAPDVLLGREIGNAEIIARLQSLLPLGRAVQEDIAIHTATGVVSLRVTAMQAPGSVSGGRNWVIWDIQEVADNAAALVAVRQQRDELAAFIDNAPVGLYSVAPDGRFLFANRTFAAWLGGVPEQLVGSDLLLSDVLSHGEARENETMTPDWPGGEAKLRPLPAEDTEPDHPARLRLVSVSQTVVPDVDGNPLRYSAVVHDLGLELRQRGTLRPVEAEFRRFFDQAPIGILVLDSAGTIREANAAFAQLCGRDDWLGQRLAAMVREEDALALARHLVALRRGEIFSRALEVRLDGPRERVVEVFAASSAEREDGQSAQLVYLVDTTDQRSLQTQFHQSQKMQAVGQLAGGIAHDFNNLLTAMIGFCDLLLQRHQPGDQSFADIMQIKQNASRAANLVRQLLAFSRQQTLVPKVLDITDVLADLRNLIGRLIGETITLKMVHGRDLGLVKVDQGQLEQVIINLAVNARDAMADGGELKIRTLNHSVAQPTQLGAEIIPAGDYVAIEVTDTGHGIAPENMAKIFDPFFTTKAVGAGTGLGLSTVYGIIKQTGGFIHVESEPGEGACFRLYLPRHRPNAEELPAGREDARPDSRDLTGQGLVLLVEDEDAVRAFAARALRNKGYTVIEAASGEQALALPPEQLDRVELLISDVVMPNLDGPTLAAQLRSRRPDLKILFISGYAEDSLRNNMAKSADVNFLPKPFSLAQLAGKVKEVMDGTA
>NZ_CP041636.1|WP_144258381.1|4057232_4058345_-|flagellar-biosynthesis-protein-FlhB
MSEDADPESKTEDASGKRLQDAADKGNVAKSMEIGYWFTFLAASISLWMLADSLGSRVVNSTTMFFAQPHLIPVDPSQLARIAVDVSMNIALALSPIIGLFVLASVAASLLQNPFHVSLEKIKPDFAKLSPMAGLKRMFGMQNFVEFVKNMIKISVIGGILLTILIPELDELEVLIDLDLSVVLPLCLKIVAKVVGALLGIMFVVAAADYLYQRFNYMKNLRMTKQEVKEEYKEIEGDPHIKARLRQLRMQRARQRMMTAVPKASVIVTNPTHFAVALKYEQGQSEAPIVVAKGADNIAFRIRELATKHDIPIVENPPLARALYKVDLEQEIPVEHFRAVAEVISYIMKLKDGIQSKYEPKVATIETAEE
>NZ_CP041636.1|WP_144258382.1|4058355_4059120_-|flagellar-biosynthetic-protein-FliR
MLQDIVAGNVYAFLLIFSRLGSTMMALPGVGENSVPARFRLTIALLISGLVVPVIGPTLPPLPAQPIHVAFLVITEIGFGLALGIMIRLLMSAMHVAGTVIALQAGLASAMLFDPAQGGQSVVVSSALVFMGIVLVFVTDLHLLGLQAAFDSYTMFPPMQAPAFGDFATTATRMVSEGFALGMRMAAPFIVYGIVFNVALGLLNRLMPSLQIFFIMQAPQIAFSLVVLGLSLGAIGLAFTGHLEEHIAQFLVKR
>NZ_CP041636.1|WP_144258383.1|4059126_4059393_-|flagellar-biosynthesis-protein-FliQ
MTAVEVTDVMREAIWVLLKVAGPAMIVSLVIGLIISLFQAVTQLQEPTLTFVPKIVAIFGALIITMPFMIGTMVTFMEHLAQRIAGLE
>NZ_CP041636.1|WP_144258384.1|4059516_4059819_-|flagellar-hook-basal-body-complex-protein-FliE
MADLRIADTLGLGKVLGGADAGKIKGDGGTAFGEMLSEALQSTVDAQKTAEATSVKAVNGKADVTDVVTAVTNAEVALDTVVAVRDRVINAYQEIMRMPI
>NZ_CP041636.1|WP_144258385.1|4059840_4060251_-|flagellar-basal-body-rod-protein-FlgC
MELKNAMQISASGMRAQGERLKIISENLANSDSLGKTPGSDPYRRKVVSFKSELDRAMGANLVKAQKPQQDRSDFELKYDPGHPSANADGYVKMPNVKSVIEMADMREAQRTYEANLNVIDSAKAMLNRTVDLLRQ
>NZ_CP041636.1|WP_144258386.1|4060298_4060709_-|flagellar-basal-body-rod-protein-FlgB
MDLDKINVIKAITRRMDWLGERQRVLAENVANADTPGYKPKDLKQVSFSELVRGSQLSGGVAATQAGHFRGLGGRSSDHWRNSTAKGYETSPNGNSVNLEQQMMNVAETQAEHGLMTNLYRKQVGMLRKALGNRQG
>NZ_CP041636.1|WP_144258387.1|4060870_4061170_+|hypothetical-protein
MADKPPQNTGKPPKQKAVALRYETEHEEAPRVVASGEGFIAEQIVRIALDNGITVHKDSDLVEILSKLDIDALIPIEAFAAVAEILSYIYRTQGREPGS
>NZ_CP041636.1|WP_144258388.1|4061260_4061659_+|hypothetical-protein
MDNINFTQVALAFGALLLLLALFYYGARALSGATSRGAKWRAGQRIGVVENAPVDGTRRLVLVRRDDTEHLLLVGTHGDLVIESNIPITKNGSGETTAAAAARRPSSSVATEDSGGWPTLRVPGRDKPGQDR
>NZ_CP041636.1|WP_144258389.1|4061658_4062447_+|flagellar-type-III-secretion-system-pore-protein-FliP
MRKIARQKLAALWADCRRALPWSLGLGLVAILMMVPAALAQSVNIDLGQGGTISGRVIQLVALTTVLALAPSILVVITSFVRIVVVLSILRSAMGTQSTPPNTVLMSLALFLTFFIMQPYLERAYNDGIQPLIEEQIDERTAFDRSIAPFHEFMRSHVREKDLALFSGFANAPIPASAEQIQLRVLIPSFIISELKRAFEIGFLLFIPFIVVDMVVASVLMSMGMMMLPPVMISLPFKLIFFVLVDGWNLVCAALVESFIAR

Crispr_ID: NZ_CP041636_4

• CRISPR_ID: NZ_CP041636_4
• CRISPR_location: 4046013-4046540
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 8 spacers

Consensus repeat of NZ_CP041636_4

Consensus_repeat	Method
CAGCGCCTGCACCTGCGCGGTCG	CRISPRCasFinder

spacers of NZ_CP041636_4

>4.1|4046036|49|NZ_CP041636|CRISPRCasFinder
TCAGGGCGGCGATCTGCGTGGTGCCGAGTTCGGCGATGTCGCTGGTGCG
>4.2|4046108|25|NZ_CP041636|CRISPRCasFinder
TCAGCGCCGCGACCTGATCGGCGGA
>4.3|4046156|49|NZ_CP041636|CRISPRCasFinder
AGAGCGCGTTCAGGTTGGTGGTGCTGAAGGCCTGCAGCTGGGTGGCAGT
>4.4|4046228|49|NZ_CP041636|CRISPRCasFinder
CCAGTTCGGCAATGTCGGTGGTACGCAGACCGGCGATCTGCGTGGTGGT
>4.5|4046300|25|NZ_CP041636|CRISPRCasFinder
CCAGCGCCTGCACCTGCGCGGTATT
>4.6|4046348|25|NZ_CP041636|CRISPRCasFinder
TGAGCGCCTGAACCTGCGCCGTGGT
>4.7|4046396|49|NZ_CP041636|CRISPRCasFinder
TCAGTTCGCCGATCTCGGTGGTGCGCAGGCCGGCGATCTGCGTCGTGGT
>4.8|4046468|49|NZ_CP041636|CRISPRCasFinder
ACAGCGCCTGCACCTGCGCGGTCGAGAAGGTGTTCAGGTTGGTGCTGCT

CRISPR arrays and Neighbor proteins around NZ_CP041636_4

CRISPR arrays

The CRISPR arrays of NZ_CP041636_4

>merge|NZ_CP041636|4|4046013-4046540|CRISPRCasFinder
CAGCGCGCCGATCTGCGCCGTGGTCAGGGCGGCGATCTGCGTGGTGCCGAGTTCGGCGATGTCGCTGGTGCGGAGCGCGGCGATCTGCGCGGTGGTCAGCGCCGCGACCTGATCGGCGGACAGCGCCTGCACCTGCGTGGTGGAGAGCGCGTTCAGGTTGGTGGTGCTGAAGGCCTGCAGCTGGGTGGCAGTGAGCGCGCGGATCTGCGCGGTGCCCAGTTCGGCAATGTCGGTGGTACGCAGACCGGCGATCTGCGTGGTGGTCAGCGCCTGCACCTGTGCCGAGCCCAGCGCCTGCACCTGCGCGGTATTCAGCGCCTGCACGTTGGTGGTGTTGAGCGCCTGAACCTGCGCCGTGGTCAGCGCGGCAATCTGCGACGTCGTCAGTTCGCCGATCTCGGTGGTGCGCAGGCCGGCGATCTGCGTCGTGGTCAGGGCCTGGATCTGCGCGGTCGACAGCGCCTGCACCTGCGCGGTCGAGAAGGTGTTCAGGTTGGTGCTGCTCAGCGCCTGCACCTGCGCTGTCGT

>NZ_CP041636|4|3|4046013-4046540|CRISPRCasFinder
CAGCGCGCCGATCTGCGCCGTGG	TCAGGGCGGCGATCTGCGTGGTGCCGAGTTCGGCGATGTCGCTGGTGCG
GAGCGCGGCGATCTGCGCGGTGG	TCAGCGCCGCGACCTGATCGGCGGA
CAGCGCCTGCACCTGCGTGGTGG	AGAGCGCGTTCAGGTTGGTGGTGCTGAAGGCCTGCAGCTGGGTGGCAGT
GAGCGCGCGGATCTGCGCGGTGC	CCAGTTCGGCAATGTCGGTGGTACGCAGACCGGCGATCTGCGTGGTGGT
CAGCGCCTGCACCTGTGCCGAGC	CCAGCGCCTGCACCTGCGCGGTATT
CAGCGCCTGCACGTTGGTGGTGT	TGAGCGCCTGAACCTGCGCCGTGGT
CAGCGCGGCAATCTGCGACGTCG	TCAGTTCGCCGATCTCGGTGGTGCGCAGGCCGGCGATCTGCGTCGTGGT
CAGGGCCTGGATCTGCGCGGTCG	ACAGCGCCTGCACCTGCGCGGTCGAGAAGGTGTTCAGGTTGGTGCTGCT
CAGCGCCTGCACCTGCGCTGTCGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041636.1|WP_144258382.1|4058355_4059120_-|flagellar-biosynthetic-protein-FliR	unknown	unknown	gnl|CDD|235568
NZ_CP041636.1|WP_144258375.1|4037833_4039048_+|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl|CDD|236226
NZ_CP041636.1|WP_144258388.1|4061260_4061659_+|hypothetical-protein	unknown	unknown	gnl|CDD|274610
NZ_CP041636.1|WP_144258381.1|4057232_4058345_-|flagellar-biosynthesis-protein-FlhB	unknown	unknown	gnl|CDD|235569
NZ_CP041636.1|WP_144258370.1|4032574_4033261_-|RlmE-family-RNA-methyltransferase	unknown	unknown	gnl|CDD|223370
NZ_CP041636.1|WP_144258385.1|4059840_4060251_-|flagellar-basal-body-rod-protein-FlgC	unknown	unknown	gnl|CDD|235556
NZ_CP041636.1|WP_144258378.1|4043557_4044631_-|recombinase-RecA	unknown	unknown	gnl|CDD|236476
NZ_CP041636.1|WP_144258383.1|4059126_4059393_-|flagellar-biosynthesis-protein-FliQ	unknown	unknown	gnl|CDD|235671
NZ_CP041636.1|WP_144258380.1|4054906_4057225_-|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|237425
NZ_CP041636.1|WP_144258373.1|4036403_4036856_-|cytochrome-c	unknown	unknown	gnl|CDD|376525
NZ_CP041636.1|WP_144258838.1|4033260_4034277_-|Ppx/GppA-family-phosphatase	unknown	unknown	gnl|CDD|223326
NZ_CP041636.1|WP_144258387.1|4060870_4061170_+|hypothetical-protein	unknown	unknown	gnl|CDD|225166
NZ_CP041636.1|WP_144258377.1|4040279_4042925_-|alanine--tRNA-ligase	unknown	unknown	gnl|CDD|234701
NZ_CP041636.1|WP_144258389.1|4061658_4062447_+|flagellar-type-III-secretion-system-pore-protein-FliP	unknown	unknown	gnl|CDD|235566
NZ_CP041636.1|WP_144258384.1|4059516_4059819_-|flagellar-hook-basal-body-complex-protein-FliE	unknown	unknown	gnl|CDD|179101
NZ_CP041636.1|WP_144258376.1|4039070_4040258_-|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl|CDD|237999
NZ_CP041636.1|WP_144258386.1|4060298_4060709_-|flagellar-basal-body-rod-protein-FlgB	unknown	unknown	gnl|CDD|235667
NZ_CP041636.1|WP_144258371.1|4034482_4035502_-|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl|CDD|236880
NZ_CP041636.1|WP_144258374.1|4037085_4037670_+|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl|CDD|129813
NZ_CP041636.1|WP_144258372.1|4035637_4036336_+|cytochrome-B6	unknown	unknown	gnl|CDD|226184

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP041636.1|WP_144258382.1|4058355_4059120_-|flagellar-biosynthetic-protein-FliR	gnl|CDD|235568	PRK05701, fliR, flagellar type III secretion system protein FliR.	9.54996e-51
NZ_CP041636.1|WP_144258375.1|4037833_4039048_+|NADP-dependent-isocitrate-dehydrogenase	gnl|CDD|236226	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase.	0
NZ_CP041636.1|WP_144258388.1|4061260_4061659_+|hypothetical-protein	gnl|CDD|274610	TIGR03500, FliO_TIGR, flagellar biosynthetic protein FliO. This short protein found in flagellar biosynthesis operons contains a highly hydrophobic N-terminal sequence followed generally by two basic amino acids. This region is reminiscent of but distinct from the twin-arginine translocation signal sequence. Some instances of this gene have been names "FliZ" but phylogenetic tree building supports a single FliO family.	0.000392671
NZ_CP041636.1|WP_144258381.1|4057232_4058345_-|flagellar-biosynthesis-protein-FlhB	gnl|CDD|235569	PRK05702, flhB, flagellar type III secretion system protein FlhB.	8.11164e-168
NZ_CP041636.1|WP_144258370.1|4032574_4033261_-|RlmE-family-RNA-methyltransferase	gnl|CDD|223370	COG0293, FtsJ, 23S rRNA methylase [Translation, ribosomal structure and biogenesis].	1.13901e-90
NZ_CP041636.1|WP_144258385.1|4059840_4060251_-|flagellar-basal-body-rod-protein-FlgC	gnl|CDD|235556	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed.	1.72146e-64
NZ_CP041636.1|WP_144258378.1|4043557_4044631_-|recombinase-RecA	gnl|CDD|236476	PRK09354, recA, recombinase A; Provisional.	0
NZ_CP041636.1|WP_144258383.1|4059126_4059393_-|flagellar-biosynthesis-protein-FliQ	gnl|CDD|235671	PRK06010, fliQ, flagellar biosynthesis protein FliQ; Reviewed.	1.11207e-25
NZ_CP041636.1|WP_144258380.1|4054906_4057225_-|PAS-domain-containing-protein	gnl|CDD|237425	PRK13557, PRK13557, histidine kinase; Provisional.	8.04099e-101
NZ_CP041636.1|WP_144258373.1|4036403_4036856_-|cytochrome-c	gnl|CDD|376525	pfam01322, Cytochrom_C_2, Cytochrome C'.	1.38939e-25
NZ_CP041636.1|WP_144258838.1|4033260_4034277_-|Ppx/GppA-family-phosphatase	gnl|CDD|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	7.28562e-99
NZ_CP041636.1|WP_144258387.1|4060870_4061170_+|hypothetical-protein	gnl|CDD|225166	COG2257, COG2257, Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown].	7.62292e-24
NZ_CP041636.1|WP_144258377.1|4040279_4042925_-|alanine--tRNA-ligase	gnl|CDD|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP041636.1|WP_144258389.1|4061658_4062447_+|flagellar-type-III-secretion-system-pore-protein-FliP	gnl|CDD|235566	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed.	1.1688e-112
NZ_CP041636.1|WP_144258384.1|4059516_4059819_-|flagellar-hook-basal-body-complex-protein-FliE	gnl|CDD|179101	PRK00732, fliE, flagellar hook-basal body complex protein FliE.	1.8515e-24
NZ_CP041636.1|WP_144258376.1|4039070_4040258_-|cyclic-nucleotide-binding-domain-containing-protein	gnl|CDD|237999	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of the structural integrity of the beta-barrel; CooA is a homodimeric transcription factor that belongs to CAP family; cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain; cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain; cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section; also found in vertebrate cyclic nucleotide-gated ion-channels.	8.82613e-22
NZ_CP041636.1|WP_144258386.1|4060298_4060709_-|flagellar-basal-body-rod-protein-FlgB	gnl|CDD|235667	PRK06004, flgB, flagellar basal body rod protein FlgB; Reviewed.	3.96714e-37
NZ_CP041636.1|WP_144258371.1|4034482_4035502_-|LysM-peptidoglycan-binding-domain-containing-protein	gnl|CDD|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	2.98125e-13
NZ_CP041636.1|WP_144258374.1|4037085_4037670_+|TIGR00730-family-Rossman-fold-protein	gnl|CDD|129813	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. [Hypothetical proteins, Conserved].	5.44628e-54
NZ_CP041636.1|WP_144258372.1|4035637_4036336_+|cytochrome-B6	gnl|CDD|226184	COG3658, COG3658, Cytochrome b [Energy production and conversion].	1.72035e-36

Protein sequences

>NZ_CP041636.1|WP_144258378.1|4043557_4044631_-|recombinase-RecA
MSSPSLRVVEKENMDKGKALEAALSQIERNFGKGSVMKLGQRQSMEVEAISTGSLGLDIALGIGGLPKGRIVEVYGPESSGKTTIALHVVAEAQKKGGTCAFVDAEHALDPSYARKLGVNIEELLISQPDTGEQALEIADTLVRSGAIDVLVIDSVAALVPQAELEGEMGDTHVGLQARLMSQALRKLTASISKSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKIRDEVVGNQTRVKVVKNKVAPPFKVVDFDIMYGEGVSKTGELIDLGVKANVVEKSGSWLSFDSQRIGQGREAAKTFLKENPEVANRIEAAIKANTGIVAAAIDAGPDAGEAEDAE
>NZ_CP041636.1|WP_144258377.1|4040279_4042925_-|alanine--tRNA-ligase
MSSASDVRQAFLDYFAKNGHSVVESSPLVPRNDPTLMFTNAGMVQFKNVFTGQEKRPYTRATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKDDAIPLAWNLITKDYGLPKEKLWVTVYHDDDQAFDIWKKIGVPESRIVRIATSDNFWAMGDTGPCGPCSEIFYDHGDKIWGGPPGTPEADGDRYIEIWNLVFMQFEQVTKEQRVSLPKPSIDTGMGLERITAVMQGKHDNYDIDLMRALIEASADASSTDPDGAHKVSHRVVADHLRSSCFLIADGVLPSNEGRGYVLRRIMRRAMRHAQLMGCKEPLMHRLVPTLVSEMGRAYPELGRAEALIAETLKLEETRFKQTLDRGLRLLDEATASMSKGDMLPGETAFKLYDTFGFPLDLTQDALRPRGINVNLDGFQTAMAAQKAEARKAWAGSGEAATEKVWFEIREDKGATEFLGYDTQSAEGRIDAIVVAGQPVNEAKAGTEVAIVLNQTPFYGESGGQQGDSGMITTAGGAKVEISDTQKKLGALHAHLGKVTEGTLKVDDMAILTVDATRRGAIASNHSATHLLHAALRRRLGDHVTQKGSLVSPDRFRFDISHPKAITGAELQAVEAEVNEMIRQNDAVTTRLMTPDEAIAAGAMALFGEKYGDEVRVLSMGKLDDGKDYSTELCGGTHVKRTGDIALFKIVGEGAVAAGVRRVEALTGEAARHYFLEQEGMLQAAADVLKAQPKEVPQRITALIEERRKLERELSELRKQLATGGGSGGPQVKDVNGVKYAARSLDGVPAKDLRGMVDAIKKEIGSGVVALTSVADGKVSVVVGVSNDLTGKINAAELVKIATPLIGGQGGGGRPDFAQGGGADPSGAAKALEAIAEQIGKAA
>NZ_CP041636.1|WP_144258376.1|4039070_4040258_-|cyclic-nucleotide-binding-domain-containing-protein
MSKTDWRRICFDLLADDRRDARIGHRLLSTLIIISVFACAAAIMLVTVPGLDARTVFWCDRLREATDILFTAEYLLRIWIAPAYAHSGRVGATTMRRRYMSSFLGVVDLLVILPFWLNLVVPFPRDLFLATEMFTLFKLARYTPGLPLVAAVLRREARGLTAALGAAGVLLVVASCIMYMLEHDAQPEVFGSIPKALWWGIVTVGSVGYGDMIPITPLGKIFNGVIILIGVGTIAIPAGLLASGFAEEIKRREFMVTWRAVASLPLFHNLDASSIAEIASLLKPQVVPSGTAIVRRDERAEAMFFIMAGEVEVEILPKPVVLGSGQHFGEIALLRRTDRTATVSAITDCRLLALEVTDFQRLLQVHPTIKEHIDRLAAERLEQRKTAEGLSPPAV
>NZ_CP041636.1|WP_144258375.1|4037833_4039048_+|NADP-dependent-isocitrate-dehydrogenase
MAKIKVKNPVVELDGDEMTRIIWKFIKEKLILPYLDVDLLYYDLGVEYRDQTNDQVTIDSAQAILKHGVGVKCATITPDEQRVTEFKLKEMWKSPNGTIRNIIGGTIFREPIICKNVPRLVPHWNDPIVVGRHAFGDQYRATDFRFPGKGTLTIKFVGEDGKIIEKEVFKAPGSGVAMAMYNLDDSIRDFARSSMNYSLVRGWPLYLSTKNTILKAYDGRFKDLFEEVFEKEFADQFKKAGITYEHRLIDDMVACAIKWSGKFVWACKNYDGDVQSDVVAQGFGSLGLMTSVLMTPDGKTVEAEAAHGTVTRHYREHQAGRETSTNPIASIFAWTRGLMHRAKLDNNADLDKFAQTLEKVCISTVEAGFMTKDLAILISKDQPWLTTQKFLDKIDENLKTALAA
>NZ_CP041636.1|WP_144258374.1|4037085_4037670_+|TIGR00730-family-Rossman-fold-protein
MTAIRSVCVYCGSSLGESNVYTAQAQILGQRLAENGIRLIYGGGRIGLMGVVADAVMKGGGEVVGIIPNHLHDWEVGHTGLTELHVVDSMHTRKRMMVEMSDAFIALPGGLGTLDEFFEIITWRQLKLHDKPVLVLNTEDYWHPLMALIETVIERGFARRTATTLYTVVEDAEAVIAALLAEPPPEHAARTSKI
>NZ_CP041636.1|WP_144258373.1|4036403_4036856_-|cytochrome-c
MATWHKAVLAATLGLAMMSVGGLAFAQSADDHIKARKDGFQVFRVSAGAIKKVVDDNSAPSGAVAAAEAIAQQAARQLQHFPPGSDKGNTKAKPEIWANWAQFEAGMKDLEGKATAVAAAGKAGDAAALKAAFGAMGGACGTCHKAFRAD
>NZ_CP041636.1|WP_144258372.1|4035637_4036336_+|cytochrome-B6
MTIETPGIASGSAPVQARITVWDLPTRLFHWALVLLVIAMVWTGWTGKLELHMTLGQAVLSLVLFRLVWGFTGNRYARFTEFVTGPISCLRYLGSLFSSSSGQHVGHNPAGGYAVLAMLVLLAVQAGSGLFTSDDIFTDGPLFSKVSSATGSLLSTVHRRTIWILLGVIGLHLLANVFYLVVKKNDLISPMVTGRKLAPAAADAGRGGHPLLALVILAVCAAIVFGGIALVK
>NZ_CP041636.1|WP_144258371.1|4034482_4035502_-|LysM-peptidoglycan-binding-domain-containing-protein
MRGSRFFFILLAAAVLGILAVIFFGADPNKRGMTPTANIPPPPVPAAPVAPSPDSVAKAPPSFDVVRISRNCTSVFAGRAMAGSVVVVKTGQRELGRVTADTRGEWVLVPDLPLERGNQEFTLESQMQGQEPIKAEANVVAVVPECQPGEGGEQAIAVLTPLKGASRLLQRPDGPLDPARKGLALDAIEYDQAGNLILSGRAQPGSTVQIYLNNEPIGVATADDKGTWRMRPDKAVDPGIYSLRVDQVEQAGGKVASRLEMPFSRARPEDVKFDASGNSIIVQPGNSLWRIARQVYGQGPRYTEIYRANQSQITDPDMIYPGQVFAVPGHNTPGGKSTN
>NZ_CP041636.1|WP_144258838.1|4033260_4034277_-|Ppx/GppA-family-phosphatase
MQAASEPAPVYAAIDLGTNNCRLLIARPVRDGFRVIEAFSRIVRLGEGLSVSGRLSDAAMARTIEALKICSEKMARRGVSSARAVATEACRRAANGNEFLHEVKTATGISLDIISTAEEARLALNGCAPLLEPPHREAIVFDIGGGSTEILWARLLGGGRTDVIDWISLPFGVVNLTERFGPGDIQSGSYAQMIDLVADELRPFEVKHALSQKLLSGQIQVLGTSGTVTTLAGVHLNLPRYERRYVDGCWLEFPTVIEQSRRLASISVPERALHPCIGEERADLVVAGCAILEALYRFWPATRLRVADRGVREGVLVELMGQRRQIGDGGRHNGWRRR
>NZ_CP041636.1|WP_144258370.1|4032574_4033261_-|RlmE-family-RNA-methyltransferase
MAQPPRKAGVKVRVKTARGRTVGQAKWLRRQLNDPYVAAAKVDGWRSRAAFKLIELDEKYKLLKPGMRVVDLGAAPGGWTQVAVKRVKSAEGEKGRGFVLGVDINPVDPIVGATLMQQDFLEEGADLKIIEALGGKADLVLSDMAAPATGHRQTDHIRIMLLCELALDFARRVLNPGGVFLAKVLRGGSENEMLNTMKRDFRSVRHVKPPASRADSAESYVIATGFRG
>NZ_CP041636.1|WP_144258380.1|4054906_4057225_-|PAS-domain-containing-protein
MALSFASLIGSPRRRAAWMLAEASPFARAITRGHQLLADNTAYRVLAARLGNEGGHAPDVLLGREIGNAEIIARLQSLLPLGRAVQEDIAIHTATGVVSLRVTAMQAPGSVSGGRNWVIWDIQEVADNAAALVAVRQQRDELAAFIDNAPVGLYSVAPDGRFLFANRTFAAWLGGVPEQLVGSDLLLSDVLSHGEARENETMTPDWPGGEAKLRPLPAEDTEPDHPARLRLVSVSQTVVPDVDGNPLRYSAVVHDLGLELRQRGTLRPVEAEFRRFFDQAPIGILVLDSAGTIREANAAFAQLCGRDDWLGQRLAAMVREEDALALARHLVALRRGEIFSRALEVRLDGPRERVVEVFAASSAEREDGQSAQLVYLVDTTDQRSLQTQFHQSQKMQAVGQLAGGIAHDFNNLLTAMIGFCDLLLQRHQPGDQSFADIMQIKQNASRAANLVRQLLAFSRQQTLVPKVLDITDVLADLRNLIGRLIGETITLKMVHGRDLGLVKVDQGQLEQVIINLAVNARDAMADGGELKIRTLNHSVAQPTQLGAEIIPAGDYVAIEVTDTGHGIAPENMAKIFDPFFTTKAVGAGTGLGLSTVYGIIKQTGGFIHVESEPGEGACFRLYLPRHRPNAEELPAGREDARPDSRDLTGQGLVLLVEDEDAVRAFAARALRNKGYTVIEAASGEQALALPPEQLDRVELLISDVVMPNLDGPTLAAQLRSRRPDLKILFISGYAEDSLRNNMAKSADVNFLPKPFSLAQLAGKVKEVMDGTA
>NZ_CP041636.1|WP_144258381.1|4057232_4058345_-|flagellar-biosynthesis-protein-FlhB
MSEDADPESKTEDASGKRLQDAADKGNVAKSMEIGYWFTFLAASISLWMLADSLGSRVVNSTTMFFAQPHLIPVDPSQLARIAVDVSMNIALALSPIIGLFVLASVAASLLQNPFHVSLEKIKPDFAKLSPMAGLKRMFGMQNFVEFVKNMIKISVIGGILLTILIPELDELEVLIDLDLSVVLPLCLKIVAKVVGALLGIMFVVAAADYLYQRFNYMKNLRMTKQEVKEEYKEIEGDPHIKARLRQLRMQRARQRMMTAVPKASVIVTNPTHFAVALKYEQGQSEAPIVVAKGADNIAFRIRELATKHDIPIVENPPLARALYKVDLEQEIPVEHFRAVAEVISYIMKLKDGIQSKYEPKVATIETAEE
>NZ_CP041636.1|WP_144258382.1|4058355_4059120_-|flagellar-biosynthetic-protein-FliR
MLQDIVAGNVYAFLLIFSRLGSTMMALPGVGENSVPARFRLTIALLISGLVVPVIGPTLPPLPAQPIHVAFLVITEIGFGLALGIMIRLLMSAMHVAGTVIALQAGLASAMLFDPAQGGQSVVVSSALVFMGIVLVFVTDLHLLGLQAAFDSYTMFPPMQAPAFGDFATTATRMVSEGFALGMRMAAPFIVYGIVFNVALGLLNRLMPSLQIFFIMQAPQIAFSLVVLGLSLGAIGLAFTGHLEEHIAQFLVKR
>NZ_CP041636.1|WP_144258383.1|4059126_4059393_-|flagellar-biosynthesis-protein-FliQ
MTAVEVTDVMREAIWVLLKVAGPAMIVSLVIGLIISLFQAVTQLQEPTLTFVPKIVAIFGALIITMPFMIGTMVTFMEHLAQRIAGLE
>NZ_CP041636.1|WP_144258384.1|4059516_4059819_-|flagellar-hook-basal-body-complex-protein-FliE
MADLRIADTLGLGKVLGGADAGKIKGDGGTAFGEMLSEALQSTVDAQKTAEATSVKAVNGKADVTDVVTAVTNAEVALDTVVAVRDRVINAYQEIMRMPI
>NZ_CP041636.1|WP_144258385.1|4059840_4060251_-|flagellar-basal-body-rod-protein-FlgC
MELKNAMQISASGMRAQGERLKIISENLANSDSLGKTPGSDPYRRKVVSFKSELDRAMGANLVKAQKPQQDRSDFELKYDPGHPSANADGYVKMPNVKSVIEMADMREAQRTYEANLNVIDSAKAMLNRTVDLLRQ
>NZ_CP041636.1|WP_144258386.1|4060298_4060709_-|flagellar-basal-body-rod-protein-FlgB
MDLDKINVIKAITRRMDWLGERQRVLAENVANADTPGYKPKDLKQVSFSELVRGSQLSGGVAATQAGHFRGLGGRSSDHWRNSTAKGYETSPNGNSVNLEQQMMNVAETQAEHGLMTNLYRKQVGMLRKALGNRQG
>NZ_CP041636.1|WP_144258387.1|4060870_4061170_+|hypothetical-protein
MADKPPQNTGKPPKQKAVALRYETEHEEAPRVVASGEGFIAEQIVRIALDNGITVHKDSDLVEILSKLDIDALIPIEAFAAVAEILSYIYRTQGREPGS
>NZ_CP041636.1|WP_144258388.1|4061260_4061659_+|hypothetical-protein
MDNINFTQVALAFGALLLLLALFYYGARALSGATSRGAKWRAGQRIGVVENAPVDGTRRLVLVRRDDTEHLLLVGTHGDLVIESNIPITKNGSGETTAAAAARRPSSSVATEDSGGWPTLRVPGRDKPGQDR
>NZ_CP041636.1|WP_144258389.1|4061658_4062447_+|flagellar-type-III-secretion-system-pore-protein-FliP
MRKIARQKLAALWADCRRALPWSLGLGLVAILMMVPAALAQSVNIDLGQGGTISGRVIQLVALTTVLALAPSILVVITSFVRIVVVLSILRSAMGTQSTPPNTVLMSLALFLTFFIMQPYLERAYNDGIQPLIEEQIDERTAFDRSIAPFHEFMRSHVREKDLALFSGFANAPIPASAEQIQLRVLIPSFIISELKRAFEIGFLLFIPFIVVDMVVASVLMSMGMMMLPPVMISLPFKLIFFVLVDGWNLVCAALVESFIAR

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP041636_3	3.1|3736270|49|NZ_CP041636|PILER-CR	3736270-3736318	49	NZ_CP041636.1	3738501-3738549	1	0.98
NZ_CP041636_3	3.3|3736438|49|NZ_CP041636|PILER-CR	3736438-3736486	49	NZ_CP041636.1	3734949-3734997	1	0.98
NZ_CP041636_3	3.3|3736438|49|NZ_CP041636|PILER-CR	3736438-3736486	49	NZ_CP041636.1	3738837-3738885	2	0.959
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP041636.1	4045412-4045436	2	0.92
NZ_CP041636_3	3.2|3736342|73|NZ_CP041636|PILER-CR	3736342-3736414	73	NZ_CP041636.1	3734853-3734925	13	0.822
NZ_CP041636_3	3.2|3736342|73|NZ_CP041636|PILER-CR	3736342-3736414	73	NZ_CP041636.1	3737829-3737901	13	0.822

1. spacer 3.1|3736270|49|NZ_CP041636|PILER-CR matches to position: 3738501-3738549, mismatch: 1, identity: 0.98

ccgagctgcgtcgagctcagttcactgacatcggtgctttccagcgcgc	CRISPR spacer
ccgagctgcgtcgaactcagttcactgacatcggtgctttccagcgcgc	Protospacer
**************.**********************************

2. spacer 3.3|3736438|49|NZ_CP041636|PILER-CR matches to position: 3734949-3734997, mismatch: 1, identity: 0.98

ttgacctgcgtctccgtcaggtccgcgatgtcagtcgtctcaagcgagg	CRISPR spacer
ttgatctgcgtctccgtcaggtccgcgatgtcagtcgtctcaagcgagg	Protospacer
****.********************************************

3. spacer 3.3|3736438|49|NZ_CP041636|PILER-CR matches to position: 3738837-3738885, mismatch: 2, identity: 0.959

ttgacctgcgtctccgtcaggtccgcgatgtcagtcgtctcaagcgagg	CRISPR spacer
ttgatctgcgtctccgtcagatccgcgatgtcagtcgtctcaagcgagg	Protospacer
****.***************.****************************

4. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to position: 4045412-4045436, mismatch: 2, identity: 0.92

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcacctgcgtggtgtt	Protospacer
******************.***.**

5. spacer 3.2|3736342|73|NZ_CP041636|PILER-CR matches to position: 3734853-3734925, mismatch: 13, identity: 0.822

ttgagctgagccgccgacagcgactgaacctgtgtggtgaccagcgcattcaggtcggtg	CRISPR spacer
ttgagctgagccgccgacagcgactgaacctgtgtggtgaccagcgcattcaggtcggtg	Protospacer
************************************************************

6. spacer 3.2|3736342|73|NZ_CP041636|PILER-CR matches to position: 3737829-3737901, mismatch: 13, identity: 0.822

ttgagctgagccgccgacagcgactgaacctgtgtggtgaccagcgcattcaggtcggtg	CRISPR spacer
ttgagctgagccgccgacagcgactgaacctgtgtggtgaccagcgcattcaggtcggtg	Protospacer
************************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	313707-313731	2	0.92
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP021374	Rhizobium sp. ACO-34A plasmid pRACO34Ab, complete sequence	110115-110139	2	0.92
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	MF417932	Uncultured Caudovirales phage clone 3S_12, partial genome	4070-4094	2	0.92
NZ_CP041636_4	4.6|4046348|25|NZ_CP041636|CRISPRCasFinder	4046348-4046372	25	MN693905	Marine virus AFVG_250M498, complete genome	29342-29366	2	0.92
NZ_CP041636_4	4.6|4046348|25|NZ_CP041636|CRISPRCasFinder	4046348-4046372	25	MN694337	Marine virus AFVG_250M497, complete genome	9329-9353	2	0.92
NZ_CP041636_4	4.6|4046348|25|NZ_CP041636|CRISPRCasFinder	4046348-4046372	25	MN694038	Marine virus AFVG_250M496, complete genome	9367-9391	2	0.92
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	967480-967504	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	395078-395102	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1677281-1677305	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1702772-1702796	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	969082-969106	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	159653-159677	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1732705-1732729	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1764191-1764215	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1908430-1908454	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1385032-1385056	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	750558-750582	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1663440-1663464	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	275935-275959	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	650868-650892	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	2119260-2119284	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1742201-1742225	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	732875-732899	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	1449825-1449849	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1684500-1684524	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1701324-1701348	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1679319-1679343	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1748141-1748165	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1369508-1369532	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1622244-1622268	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1678787-1678811	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1753681-1753705	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1748108-1748132	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1657540-1657564	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1733122-1733146	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1746902-1746926	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1644019-1644043	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1657852-1657876	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1733122-1733146	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1746938-1746962	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1657540-1657564	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1644665-1644689	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1656743-1656767	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1733122-1733146	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1733122-1733146	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1733122-1733146	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1746938-1746962	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	299094-299118	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP049248	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed2, complete sequence	105017-105041	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1746927-1746951	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1644041-1644065	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1657767-1657791	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1638413-1638437	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1699457-1699481	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1731438-1731462	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1730437-1730461	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1746927-1746951	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1644041-1644065	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1657851-1657875	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1744084-1744108	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1747928-1747952	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1644041-1644065	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1644041-1644065	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1746938-1746962	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1733125-1733149	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	266948-266972	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1746949-1746973	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1746750-1746774	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	266948-266972	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP032686	Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence	32642-32666	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	335396-335420	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP032691	Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence	27602-27626	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	294348-294372	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	277402-277426	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	234517-234541	3	0.88
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	713319-713343	3	0.88
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	534306-534330	3	0.88
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	533515-533539	3	0.88
NZ_CP041636_6	6.1|4046900|25|NZ_CP041636|CRISPRCasFinder	4046900-4046924	25	MN234184	Mycobacterium phage IdentityCrisis, complete genome	3762-3786	3	0.88
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP030205	Salmonella enterica strain SA20083530 plasmid pSA20083530.2, complete sequence	27539-27563	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	463181-463205	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP048631	Ancylobacter pratisalsi strain DSM 102029 plasmid pLGM, complete sequence	54795-54819	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1340745-1340769	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP032688	Rhizobium sp. CCGE531 plasmid pRCCGE531a, complete sequence	144256-144280	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP017078	Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence	38728-38752	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_AP018665	Sphingobium amiense strain DSM 16289 plasmid pSAMIE_2, complete sequence	78585-78609	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP032693	Rhizobium sp. CCGE532 plasmid pRCCGE532a, complete sequence	144255-144279	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP020399	Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence	235241-235265	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NC_023497	Amycolatopsis keratiniphila plasmid pXL100, complete sequence	30886-30910	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	679065-679089	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	AP021850	Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome	362385-362409	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP015322	Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence	881064-881088	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP053023	Sphingobium yanoikuyae strain YC-XJ2 plasmid p-B-Sy, complete sequence	117000-117024	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	120275-120299	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	233012-233036	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	695989-696013	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	6006-6030	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP022747	Sphingobium hydrophobicum strain C1 plasmid p1, complete sequence	123536-123560	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	419442-419466	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NC_009507	Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence	286276-286300	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	333599-333623	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1436402-1436426	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	MK814748	Mycobacterium phage XianYue, complete genome	23302-23326	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	311972-311996	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	402215-402239	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	776916-776940	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP032703	Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence	452453-452477	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	405062-405086	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	CP054911	Pantoea ananatis strain FDAARGOS_680 plasmid unnamed3, complete sequence	169407-169431	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	387673-387697	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	387673-387697	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	342486-342510	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1621172-1621196	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	252471-252495	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1227325-1227349	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1628329-1628353	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1623147-1623171	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1622623-1622647	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NC_016591	Burkholderia sp. YI23 plasmid byi_2p, complete sequence	210343-210367	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1598893-1598917	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP021084	Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence	152235-152259	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1599539-1599563	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1598915-1598939	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1598915-1598939	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1598915-1598939	4	0.84
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1598915-1598939	4	0.84
NZ_CP041636_4	4.6|4046348|25|NZ_CP041636|CRISPRCasFinder	4046348-4046372	25	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	923395-923419	4	0.84
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NC_010373	Methylobacterium sp. 4-46 plasmid pM44601, complete sequence	13767-13791	5	0.8
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	AP021850	Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome	302619-302643	5	0.8
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	308217-308241	5	0.8
NZ_CP041636_4	4.2|4046108|25|NZ_CP041636|CRISPRCasFinder	4046108-4046132	25	MN234170	Mycobacterium phage MalagasyRose, complete genome	10533-10557	5	0.8
NZ_CP041636_4	4.5|4046300|25|NZ_CP041636|CRISPRCasFinder	4046300-4046324	25	AP021850	Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome	163346-163370	5	0.8
NZ_CP041636_4	4.6|4046348|25|NZ_CP041636|CRISPRCasFinder	4046348-4046372	25	NZ_CP016618	Microvirga ossetica strain V5/3m plasmid unnamed3, complete sequence	347186-347210	5	0.8
NZ_CP041636_2	2.1|3344663|34|NZ_CP041636|CRISPRCasFinder	3344663-3344696	34	KC462197	Burkholderia phage ST79, complete genome	438-471	9	0.735

1. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 2, identity: 0.92

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgcctcgacctgatcggcggt	Protospacer
******** *************** 

2. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP021374 (Rhizobium sp. ACO-34A plasmid pRACO34Ab, complete sequence) position: , mismatch: 2, identity: 0.92

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgccgcgatctgatcggtgga	Protospacer
************.********.***

3. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to MF417932 (Uncultured Caudovirales phage clone 3S_12, partial genome) position: , mismatch: 2, identity: 0.92

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgcctcggcctgatcggcgga	Protospacer
******** **.*************

4. spacer 4.6|4046348|25|NZ_CP041636|CRISPRCasFinder matches to MN693905 (Marine virus AFVG_250M498, complete genome) position: , mismatch: 2, identity: 0.92

tgagcgcctgaacctgcgccgtggt	CRISPR spacer
tgagcgcccgaagctgcgccgtggt	Protospacer
********.*** ************

5. spacer 4.6|4046348|25|NZ_CP041636|CRISPRCasFinder matches to MN694337 (Marine virus AFVG_250M497, complete genome) position: , mismatch: 2, identity: 0.92

tgagcgcctgaacctgcgccgtggt	CRISPR spacer
tgagcgcccgaagctgcgccgtggt	Protospacer
********.*** ************

6. spacer 4.6|4046348|25|NZ_CP041636|CRISPRCasFinder matches to MN694038 (Marine virus AFVG_250M496, complete genome) position: , mismatch: 2, identity: 0.92

tgagcgcctgaacctgcgccgtggt	CRISPR spacer
tgagcgcccgaagctgcgccgtggt	Protospacer
********.*** ************

7. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

8. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

9. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

10. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

11. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

12. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

13. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

14. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

15. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

16. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

17. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

18. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

19. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

20. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

21. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

22. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

23. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

24. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

25. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

26. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

27. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

28. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

29. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

30. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

31. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

32. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

33. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

34. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

35. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

36. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

37. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

38. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

39. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

40. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

41. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

42. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

43. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

44. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

45. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

46. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

47. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

48. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

49. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP049248 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
acagcgctccgacctgatcggcgga	Protospacer
 ******. ****************

50. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

51. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

52. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

53. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

54. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

55. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

56. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

57. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

58. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

59. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

60. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

61. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

62. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

63. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

64. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

65. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

66. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

67. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

68. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

69. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgcctcgacctgttcggcgga	Protospacer
 ******* ******* ********

70. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP032686 (Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgccgcggcctgatcggacga	Protospacer
***********.*********  **

71. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagccccgcgacctgttcggcgaa	Protospacer
***** ********** ******.*

72. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP032691 (Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgccgcggcctgatcggacga	Protospacer
***********.*********  **

73. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgccgcgaccagatcgtcgaa	Protospacer
************** ***** **.*

74. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgccgcgaccagatcgtcgaa	Protospacer
************** ***** **.*

75. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP044080 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.88

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgccgcgaccagatcgtcgaa	Protospacer
************** ***** **.*

76. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 3, identity: 0.88

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
tcagcgcctgcacctgcgcggtaaa	Protospacer
.**********************  

77. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 3, identity: 0.88

ccagcgcctgcacctgcgc--ggtatt	CRISPR spacer
ccagcgcctgcacctgcgcctggca--	Protospacer
*******************  **.*  

78. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 3, identity: 0.88

ccagcgcctgcacctgcgc--ggtatt	CRISPR spacer
ccagcgcctgcacctgcgcctggca--	Protospacer
*******************  **.*  

79. spacer 6.1|4046900|25|NZ_CP041636|CRISPRCasFinder matches to MN234184 (Mycobacterium phage IdentityCrisis, complete genome) position: , mismatch: 3, identity: 0.88

tgaacgcattcaggttgccgctgcc	CRISPR spacer
agaccgcagtcaggttgccgctgcc	Protospacer
 ** **** ****************

80. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP030205 (Salmonella enterica strain SA20083530 plasmid pSA20083530.2, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
cgagcgccgccacctgatcggcggt	Protospacer
. ******** ************* 

81. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tgcgcgccgcgacctgatcggcgcc	Protospacer
*  ********************  

82. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP048631 (Ancylobacter pratisalsi strain DSM 102029 plasmid pLGM, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgccacgacctgatcggcaag	Protospacer
********.*************...

83. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgcctcgacctgatcggcatt	Protospacer
******** *************.  

84. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP032688 (Rhizobium sp. CCGE531 plasmid pRCCGE531a, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ccagcgccgcgaccggaccggcggt	Protospacer
.************* **.****** 

85. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP017078 (Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgccgcgacctgatcgtagta	Protospacer
 *******************  * *

86. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_AP018665 (Sphingobium amiense strain DSM 16289 plasmid pSAMIE_2, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ccagcagcgcgacctgatcggcggg	Protospacer
.****. *****************.

87. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP032693 (Rhizobium sp. CCGE532 plasmid pRCCGE532a, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ccagcgccgcgaccggaccggcggt	Protospacer
.************* **.****** 

88. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP020399 (Burkholderia multivorans strain FDAARGOS_246 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgccgcgacctgctcggccgt	Protospacer
 *************** ***** * 

89. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NC_023497 (Amycolatopsis keratiniphila plasmid pXL100, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ccagcgcgtcgacctgatcggcggt	Protospacer
.******  *************** 

90. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgccgcgatctgctcggcgag	Protospacer
************.*** ******..

91. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgccccgaccagatcggcggt	Protospacer
 ******* ***** ********* 

92. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgcctcgatctgatcggcgat	Protospacer
******** ***.**********. 

93. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP053023 (Sphingobium yanoikuyae strain YC-XJ2 plasmid p-B-Sy, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ccagcagcgcgacctgatcggcggg	Protospacer
.****. *****************.

94. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgccgcgtccagatcggcgag	Protospacer
*********** ** ********..

95. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ccagaaccgcgacctgatcggcggc	Protospacer
.*** .****************** 

96. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgccgcgatctgctcggcgag	Protospacer
************.*** ******..

97. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ccagcgccgcgatcagatcggcggt	Protospacer
.***********.* ********* 

98. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022747 (Sphingobium hydrophobicum strain C1 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ccagcagcgcgacctgatcggcggg	Protospacer
.****. *****************.

99. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
gcagcgccgcgacctgatcagccgt	Protospacer
 ******************.** * 

100. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NC_009507 (Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ccagcagcgcgacctgatcggcggg	Protospacer
.****. *****************.

101. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgccgcgccctgatcgacgac	Protospacer
*********** ********.**. 

102. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tcagcgccgcgatctgctcggcgag	Protospacer
************.*** ******..

103. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to MK814748 (Mycobacterium phage XianYue, complete genome) position: , mismatch: 4, identity: 0.84

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ccagggccgcgacctgatcgccggc	Protospacer
.*** *************** *** 

104. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
tctgcacctgcacctgcgcggtatc	Protospacer
.* **.******************.

105. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
tctgcacctgcacctgcgcggtatc	Protospacer
.* **.******************.

106. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcggagtg	Protospacer
***********.********* .* 

107. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP032703 (Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcgggttc	Protospacer
***********.*********  *.

108. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
tctgcacctgcacctgcgcggtatc	Protospacer
.* **.******************.

109. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to CP054911 (Pantoea ananatis strain FDAARGOS_680 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcgggttc	Protospacer
***********.*********  *.

110. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
tctgcacctgcacctgcgcggtatc	Protospacer
.* **.******************.

111. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
tctgcacctgcacctgcgcggtatc	Protospacer
.* **.******************.

112. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
tctgcacctgcacctgcgcggtatc	Protospacer
.* **.******************.

113. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcggagtg	Protospacer
***********.********* .* 

114. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
tctgcacctgcacctgcgcggtatc	Protospacer
.* **.******************.

115. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcacctgcgccttgat	Protospacer
*******************  *. *

116. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcggagtg	Protospacer
***********.********* .* 

117. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcggagtg	Protospacer
***********.********* .* 

118. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcggagtg	Protospacer
***********.********* .* 

119. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NC_016591 (Burkholderia sp. YI23 plasmid byi_2p, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
acagcgcctgcacctgcgccggatc	Protospacer
 ****************** * **.

120. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcggagtg	Protospacer
***********.********* .* 

121. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP021084 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
tgagcgcctgcaccggcacggtatt	Protospacer
. ************ **.*******

122. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcggagtg	Protospacer
***********.********* .* 

123. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcggagtg	Protospacer
***********.********* .* 

124. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcggagtg	Protospacer
***********.********* .* 

125. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcggagtg	Protospacer
***********.********* .* 

126. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 4, identity: 0.84

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcggagtg	Protospacer
***********.********* .* 

127. spacer 4.6|4046348|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 4, identity: 0.84

tgagcgcctgaacctgcgccgtggt	CRISPR spacer
gcagcgcctgcaactgcgccgtggt	Protospacer
  ******** * ************

128. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NC_010373 (Methylobacterium sp. 4-46 plasmid pM44601, complete sequence) position: , mismatch: 5, identity: 0.8

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ggtgcgccgcgacctgatcggcgac	Protospacer
   ********************. 

129. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 5, identity: 0.8

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ggcgcgccgcgacctgctcggcggg	Protospacer
   ************* *******.

130. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 5, identity: 0.8

tcagcgccgcgacctgatcggcgga	CRISPR spacer
ccagcgccgcgaccagatcggccat	Protospacer
.************* ******* . 

131. spacer 4.2|4046108|25|NZ_CP041636|CRISPRCasFinder matches to MN234170 (Mycobacterium phage MalagasyRose, complete genome) position: , mismatch: 5, identity: 0.8

tcagcgccgcgacctgatcggcgga	CRISPR spacer
tgcgcgccgcgacctgatcggcatg	Protospacer
*  *******************. .

132. spacer 4.5|4046300|25|NZ_CP041636|CRISPRCasFinder matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 5, identity: 0.8

ccagcgcctgcacctgcgcggtatt	CRISPR spacer
ccagcgcctgcgcctgcgcggcggc	Protospacer
***********.*********.. .

133. spacer 4.6|4046348|25|NZ_CP041636|CRISPRCasFinder matches to NZ_CP016618 (Microvirga ossetica strain V5/3m plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.8

tgagcgcctgaacctgcgccgtggt	CRISPR spacer
tgagcgcctgaacctgcaccggcaa	Protospacer
*****************.***  . 

134. spacer 2.1|3344663|34|NZ_CP041636|CRISPRCasFinder matches to KC462197 (Burkholderia phage ST79, complete genome) position: , mismatch: 9, identity: 0.735

ccgcgtcccccgcgtcaatcgcggttcggtgacc	CRISPR spacer
ccgcgtcgcccccgtcaatcgcggcctgccgctc	Protospacer
******* *** ************...* .* .*

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	2945899 : 2953926	8	Agrobacterium_phage(16.67%)	protease	NA
DBSCAN-SWA_2	3381410 : 3389804	10	Bacillus_phage(16.67%)	NA	NA
DBSCAN-SWA_3	3448794 : 3459567	12	uncultured_Mediterranean_phage(77.78%)	protease,tRNA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP041636|2945899:2953926|DBSCAN-SWA
CATGGAAAAGATGGTCGATACATACATGAACATGCTGGTTCCGATGGTGGTCGAGCAGACCAACCGGGGCGAGCGCTCGTATGACATCTATTCGAGGCTGCTGAAGGAGCGGATCATCTTCATGGTCGGCCCGGTGAACGACACCATGGCCAGCCTGGTGACCGCCCAGTTGCTGTTTCTCGAAGCCGAAAACCCGAACAAGGAAATCTCATTCTATATCAACAGCCCCGGCGGGCTGGTGACGGCCGGCATGGCGATCTACGACACCATGCAGTACATCCGTCCCAAGATTTCCACGCTGTGCATCGGCCAGGCCGCCTCGATGGGGTCGCTGCTGCTCGCCGCCGGCGAGAAGGGCATGCGTTACGTGCTGCCGAATGCGCGAATCATGGTCCATCAGCCGTCCGGCGGCTTCCAGGGCCAAGCCGCCGATATCGAGATCCATGCCAAGGAAATCCTCGATATGCGCGCCCGGCTGAACGCCCTTTATGCCAAGCATACCGGCCAGGATGTCGACCGGATCGAACTGGCCATGGAGCGCGACCGCTTCCTGACTCCCACCGAGGCCAAGGAATTCGGCCTGGTCGACGAGGTGGTCGACCGCCGCCCGGAACCGGTGGCCAAGAAGTAAGTTCGGTAAATAAAGCCGGAATGCCGGCTCCAAACGCGGGGCCGGCGCCGGCCTCTCCCAGTCGCCGGGGTGGGCCGGCCGGCGCACTTGTCAGACCACCCTTAAGCGTTAAATCATGGTTATGTGACCTGATTCCGGGGCCTTAGGTGAAATCGGCGGGGGGTATCTCCGTTGTGCAGGCCGTCATGGTTCCTTATTATGATGATTCGATGGATTAGGGCCCCGCGTCGCCCGGCGCCGGCCCGCTCAGCGGAGTAGGCATGACCAAATTGAGCGGCAGTGACTCCAAGAATACGCTGTACTGCTCGTTCTGCGGTAAGAGCCAGCACGAGGTGCGTAAGCTGATCGCCGGTCCGACGGTGTTCATCTGCGACGAGTGCGTCGAGCTCTGCATGGATATCATCCGCGAGGAGCACAAGTCGGCCCTGGTGAAGACCCGGGACGGTGTGCCGACCCCGCAGGAGATCTGCCGCGTACTGGACGACTATGTGATTGGGCAGTACCACGCCAAGAAGGTGCTGTCGGTCGCGGTACACAATCACTACAAGCGCATCGGCCAGGGCGGCAAGAACAACGAAGTCGAACTCGCCAAGTCGAACATCCTGCTGATCGGCCCGACCGGCTGCGGCAAGACTCTTCTGGCGCAGACGCTGGCCCGCATCCTCGAAGTGCCCTTCACGATGGCTGACGCCACCACACTGACCGAAGCCGGTTACGTGGGCGAGGATGTCGAGAACATCATCCTCAAGCTGTTGCAGTCGGCAGATTACAATGTCGAGCGCGCGCAGCGCGGCATCGTTTATATCGACGAAGTCGACAAGATCAGCCGCAAGTCCGACAACCCGTCCATCACCCGCGACGTGTCGGGCGAGGGCGTGCAGCAGGCCTTGCTGAAGATCATGGAAGGCACGGTTGCCAGCGTTCCGCCACAGGGCGGCCGCAAGCATCCGCAGCAGGAATTCCTGCAGGTCGACACCACCAATATCCTGTTTATCTGCGGCGGCGCCTTTGCCGGCCTCGAGAAGATCATTGCCGGTCGTGGCAAGGGCAGCTCGATGGGCTTCGGCGCCGAAGTGCGTGGTCCCGATGAGCGTCGTGCGGGCGAAATCCTGTCGGAAGTCGAACCGGACGACCTGCTGAAATTCGGCCTGATCCCGGAGTTCATCGGCCGCCTGCCGGTGATCGCGACGCTGAACGATCTGGACGAACCGGCCCTGGTCGACATTCTGACCAAGCCGAAGAATGCGCTGATCAAGCAGTATCAGCGCCTGTTCGAGATGGAAGACGTCAAGCTGACCTTCGCCGACGAGGCGGTGGCTGGCGTCGCCCGCAAGGCGATCGCACGCAAGACCGGTGCGCGTGGCCTGCGCTCGATCCTGGAAGCCATCCTGCTCGATCCGATGTTCGATCTGCCGAACATGAACGGTGTCGAGGAAGTGGTGATCTCGACCGACGTGGTCGAAGGACGCGCCAAGCCGCTGCTGATCTACGCCGATCGCAAGCAGGAAGACGTCAGCGCCTGATCACACCACAGGCCTCATGGCAGTGCGACTTTCGCGGGCCGCCCTTTCAAAGGGGCGGCCCGTAGTGTTCTACCAGCGGAAAAGGCTCGTAAAATCCGTGCAGTAGGGCGCGCCAGCGGCGGTAATCGTCGGAGCGGCGAAAACCTTCCTCATGGGCGGCCACGTCGGCCCAGTTAACCACCAGCAGATACCGCTGCGGATTTTCCAGGCAGGGCCGGACCTCGGCGCTATGGCAGCCCGGCTGGCGTCGGATCAACGGCATCGCTTCGCTGAGCGCGGCCTCGAATGCCGGTGCATGCCTGCCGCGAAGGTCAAGCACCGCCACCTCCAGTATGCCATGCCGCGCCGGACCCTGAGCGTAGCCTGTGGACGACTCGGTCCCTGTCATCGTGATGTTCCTTCAGGGTGTGGAAAAACCGCCCATCCCTTGACGGACGTTGTTGGAATTCCCATCTTAATCGCAGTCAGGCGGCGCAAAAAGGATGCCTTCATGGCCCCTTGGGCCGGCCGCCCTCCAGGAAGAAACCTCGCATGTTCACATCGCCCCGCGCCCAAGTTTTCCCGGTCCTGCCGCTGCGGGACATCGTCGTATTCCCGCACATGATCGTGCCGCTGTTTGTCGGTCGCGAGAAATCGGTGCGGGCGCTCGAAGATGTCATGAAGGACGATAAGCAGATTCTGCTGGTCGCCCAGAAAAATGCCGGTCAGGACAACCCGAATCCGGAAGATATCCATGCCGTAGGCACCATCGCCTCGGTGCTGCAGCTGCTGCGTCTGCCGGACGGCACCGTGAAGGTGCTGGTCGAGGGCAGCCAGCGCGCCAAGATCGTCAAGTTCAACGAAAACGCCGAGTTCTTCCAGGTTCAGGCTGAAGTCATTTCGGATGACTCCGGTGAAGGCCGCGAGACCGAGGCGCTGTCGCGTTCGGTGATCAACCAGTTCGAACAGTATGTGAAGCTGAATCGCAAGATTCCGCCCGAGGTGCTGGTTTCGCTCAACCAGATCGACGATGCGTCCAAGCTGGCCGATACGGTCGCGTCGCATCTGACCATCAAGATCAGCGACAAGCAGGAACTGCTGGAGATTGCCAGCGTGGTGGAACGCCTCGAGCGCGTTTATGCCATGATGGAAGGCGAGATCGGCGTGCTGCAGGTCGAGAAGAAAATCCGCTCGCGCGTGAAGCGCCAGATGGAGAAGACCCAGCGCGAGTATTACCTCAACGAACAGCTCAAGGCGATTCAGAAGGAGCTGGGTGAGGGCGAGGACGGCCGCGACGAAGTGGCCGAGATCGAGCTGCGCATCAAGAAGACCCGCCTCAGCAAGGAAGCCCGTGAAAAGGCGATGGCCGAGGTGAAGAAGCTGCGCTCGATGAGCCCGATGTCGGCCGAAGCGACCGTCATCCGCAACTACCTCGACTGGATGCTGTCGATCCCGTGGGGCAAGCGCAGCAAGATCAAGAAGGACATCAAGAATTCCGAAAAGGTGCTGAACGACGACCATTATGGTCTGGAGAAGGTCAAGGAGCGTATCCTTGAGTATCTCGCCGTGCAGCAGCGCTCGGGCAAGCTGAAGGGGCCGATCCTCTGCCTCGTCGGTCCGCCCGGCGTGGGCAAGACCTCGCTCGGCAAGTCGATCGCCAAGTCGACCGGTCGCAACTTCGTGCGCGTGTCGCTTGGCGGCGTGCGCGACGAAGCCGAAATCCGCGGTCACCGCCGCACTTACATCGGCTCCATGCCCGGCAAGGTCGTGCAGTCGATGAAGAAGGCGAAGACCAACAATCCGCTCTTCCTGTTCGACGAAATCGACAAGATGGGTCAGGACTTCCGCGGCGATCCGTCTTCGGCGCTGCTCGAAGTGCTCGACCCCGAGCAGAACAGCACCTTCAGCGATCACTATCTCGAGGTCGATTACGATCTCTCGGACGTGATGTTCATCTGCACCGCCAACAGCCTGCGCATGCCGCAGCCGCTGCTGGACCGCATGGAGATCATCCGTATCCCCGGCTACACCGAGGATGAGAAGATCGAAATCTGCAAGCGTCACCTGATCGAAAAGCAGATCGAAGCTGCCGGCCTGAAGAAGGGCGAGTGGTCGATCACCGACGAAGCTTTGCGCGACCTGGTTCGCTACTACACCCGCGAAGCCGGCGTGCGTTCGCTGGAGCGCGAACTGGCCAACCTGACCCGCAAGGCGGTGAAGGAAATCCTGTCGAAGGGCGTGAAGTCGATCAAGGTCACGCCGAAGAACCTCGACAAGTATGCCGGCGTGCGCCGCCATCGCTACGGCGAGGCCGAACTGGAAGATCTGGTCGGCACCGTCACCGGCCTGGCCTGGACCGAGGTGGGCGGCGAGTTGCTGACCATCGAGTCCGTCATGCTGCCCGGCAAGGGCCGCATGACCATCACCGGCAAGCTGGGTGAGGTGATGCAGGAATCGGTGCAGGCCGCCCGCTCGTTCGTCCGTGCCCGCGCGGTTGCCTTTGGGGTGAAGCCGCCGATCTTCGACAAGCGCGACATCCACGTCCACGTGCCCGAGGGCGCCACCCCGAAGGACGGCCCCTCGGCCGGCATCGCGATGGTCACCTCGATCGTCTCGGTACTGACGGGCATTCCGGTCCGCAAGGACGTGGCGATGACCGGCGAGGTCACCCTGCGTGGCCGCGTGCTGCCGATCGGCGGCCTGAAGGAGAAGCTGCTGGCCGCCCACCGGGGTGGTATCAAGACGGTGCTGATCCCGAAGGAGAACGAGAAGGACCTGGTCGAGATCCCGGATAACGTGAAGAAGGGGCTCGAAATCATCCCGGTTTCTACCTGCGAGGAGGTGCTGAAGCATGCTCTGGTCGCGGAATTGAAACCAATTGAGTGGAGCGACGTTGACGATCTGAGTAAACCCGCCGTGGTCGAGCCTGAAAAGGAAGGCGACCGCGAGGGTGTGGTCAAACACTGACCGTGATTAGAGCAGTGCGGAGGGCTCCAGCGTGAACAAGCAGGACCTGATGGCCCAGGTGCGCGACACCTCGGGTCTCAGCAAGGAACAGGCAGAGCGGGCCGTAGAGTCGGTCTTCGAACTCATCACCGAGGCGTTGCGCCGCGGTGAGGAGGTCAGGATCGTCGGCTTCGGCAGCTTCTTCGTCGGTACCCGGGCCGCCAGCCCGGGCCGCAATCCCCGTACGGGTGAGCGGATCGACCTGCCGCCGACCAAACAGCCGAAATTCCGCGCCGGCAAGACGCTGAAGGAAGCGGTCGGCTGACGCAGGTATTTTCCTGCAGCAAATTTCAGCGGCCGGCAGTCTCTGCCGGCCGTTTGCTGTTTGTGGCGCATGTGGGCGCCGCCTGCCATGATGACAGCGTTAGCAGCAGGGCGGGTGATGACTGAGAAGACCGGAACGATCGGTGAGCGCGCCATGCTTGACCCGGCCGAGGGTGACCTGCTGGTCGAGATCGATGGCCCGCGCCATCCGGGCGCGGTGGCGCTGTACCGGCTGTGGCAGGAGTTAAGGCCGGCGGGCAATGGTGTGCCCCAGCGCGACGATCTCAGCTTCGAGCGGCTGACCGAACTCGGCATCGTCAGCAACTGCTTCGTGATCGAGCCGCTGGAGGGCGGCCGCGACTGGCGCTACCGGCTACTGGGTACGGCGATAACCTGGCTGTTCGGCGGCGATGCCACCAACATTCCCTTTTCGAAGCATTTCATGCCCGAAGAGGCCGAGCTGTGCATCCGGCTGTCGAACCGCGTGGCGCAGTCGCGCCAGCCGGTTTTCCTGTTCGGCCGTTTCCAGCCCGGCGATTTCAGTGGCACGCTGGAAACCATGTCGTTGCCGGTGCTGGCGCGCGATGGCGAAACGGTCTGGCTGATCGGGGCGAGCTTCCCGGTTGAAACCAAGGACTAAGGTCGCTGGGCCGCCTTGCCGGGCGATGGCGGCATCTGGTATGAAGGCCGCCTTCGCTGCCCGGTTCCGGGAGCAGAGCGGGCGATTAGCTCAGCGGTAGAGCGCCTCGTTTACACCGAGGATGTCGGCGGTTCAATCCCGTCATCGCCCACCATTTTTCCCCGATCACGGCATGAACTGCCCGCCATTGACGTCGATGATCTGTCCGGTGACGTAACCCGACAGCATCGGCGAGGCGAGGAAGACGATCGGCCAGCAGCAGTCTTCCGCGCGCCCGAGCCGGCCCATCGGGATCGTGCGACAGACAGAGTCCAGGAACTCGGCGGATGTCGTCGCGTGGAATGGCGTTTCGATCACGCCGGGCGCGATGGCATTGACGCGAATGCCGGCCGGTGCAAATTCCTTGGCCATCGAGCGCGTCAGGCTGTGCACCGCAGCCTTGGTCGCGGCGTACACCCCGGAGCCCGGTGCGCCACCATTCCGGCCTGCAATAGATCCGGTGTTGATGATCGAAGCCATGGCGGACTTCGCCAGGTATGGATGCGCGGCACGCGCAAGCTCGGCCACTGCCCGTACATTCAGTGCCATGACCTCGTCGTAGATCGCGTCGTCAAAGTCATGCAGCGGCGTGCGTCCGACAATAGCGCCGGCATTGCTGACCAGCGTATCGAGCCCGCCAAGTTTTTCAGCCGCGGCTGCGACGATGTCGGCGGCCGAGCCGCGCTGTCTCAGGTCGCCGGAGACCACATCAGTAGCGCCGATCTCGGCGGCCAGTGCGGAGGCCGCCTCGGCGCTGCTGCCGGAATGGATCGCGACCCTGGCGCCACAGCTGGCAAAAACGCGAGCGGTGGCGGCGCCGATGCCGGTGCTGGCGCCAGTGATCAGCACGCGCAGGCCTGTCACGCCCAGATCCAGTTTCATGGCACTCTCCCTCAACGCACGCTCACCATGGCAGCGGACGACAGCGCCAGGCGCACCGCCTCGCCAGTCTCGAACAGGTCCTCGGGCGGGCGGGAGACGCGCAGTGGCGCGGCCAGGCCGGGTACGGCGACCTCATATTCCCAGGTCTCGCCCAGGAAGACGCGGCTGCGCAGCGTGCCATCGATCTCGAAAGCCTGTTTCGCTGCGGAGTGCGACCGGCCCATGCCGATGCGATGCGGCCGCACGGACAAAGCCGTGGCCTGCTCGACCGGCGCGGGGAAGGGCAGGCTTATGCTGCCGGCGCTGAAACTGCCATTGGTGAAGCTGCCGTCGATCAGGTTGGTGCGGCCGATGAAGCCGGCGACGAAGCGCGTCTGCGGATTGTCGTAGACCTGCTTCGGGCTATCGACCTGTTCGATGCGACCACGATTCATCACCACGATGCGGTCGGCCGTCACCATCGCCTCGGTCTGGTCATGCGTGACATAGACGCTGGTGATGCCGAATTCATCATGCAGGCGGCGGATCTCAAAGCGCATCTCCTCGCGCAGGTTGGCATCGAGATTCGACAGCGGCTCATCCAGAAGCAGAACTTTTGGCTCGACCACGATGGCGCGCGCCAGGGCGACGCGCTGCTGCTGGCCGCCGGACAACTCGGCCGGCAGGCGTTCGGCCAGCTGATCCAGATGCACGACTTCCAGGATGCGGCGGGTGCGGCGTTCGATCTCGTCGCGGCCGAGCTTACGCAAACGGAGCCCGAAGGCGACGTTCTCGAACACCGTCATATGCGGCCAGATCGCATAGCTCTGGAAGATCATCGACATCTGCCGTTGCTCTGGCGGCAGGTTTTCATGCGGGCCGAACAGCGTACGGCCGCCCAGCCGGATGCTGCCCGACGAGGGCGTGACGAAGCCGGCAATCGCCCGCAAGGTGGTGGTCTTGCCGCAACCGGACGGACCGAGCAGGGCAATGAACTCGCCCTCGGCAAAATCCAGCGACAGGTTCTCGACCGCAGTGAATTCACCGAAGCGGCATTCGAGGTTGGCAAGGCTGAGATAGGGCAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP041636|2945899:2953926|2946789_2948052_+|WP_144069351.1|protease|DBSCAN-SWA
MTKLSGSDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREEHKSALVKTRDGVPTPQEICRVLDDYVIGQYHAKKVLSVAVHNHYKRIGQGGKNNEVELAKSNILLIGPTGCGKTLLAQTLARILEVPFTMADATTLTEAGYVGEDVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAGRGKGSSMGFGAEVRGPDERRAGEILSEVEPDDLLKFGLIPEFIGRLPVIATLNDLDEPALVDILTKPKNALIKQYQRLFEMEDVKLTFADEAVAGVARKAIARKTGARGLRSILEAILLDPMFDLPNMNGVEEVVISTDVVEGRAKPLLIYADRKQEDVSA
>NZ_CP041636|2945899:2953926|2951371_2951941_+|WP_144069355.1|DBSCAN-SWA
MWAPPAMMTALAAGRVMTEKTGTIGERAMLDPAEGDLLVEIDGPRHPGAVALYRLWQELRPAGNGVPQRDDLSFERLTELGIVSNCFVIEPLEGGRDWRYRLLGTAITWLFGGDATNIPFSKHFMPEEAELCIRLSNRVAQSRQPVFLFGRFQPGDFSGTLETMSLPVLARDGETVWLIGASFPVETKD
>NZ_CP041636|2945899:2953926|2948583_2950998_+|WP_144069353.1|DBSCAN-SWA
MFTSPRAQVFPVLPLRDIVVFPHMIVPLFVGREKSVRALEDVMKDDKQILLVAQKNAGQDNPNPEDIHAVGTIASVLQLLRLPDGTVKVLVEGSQRAKIVKFNENAEFFQVQAEVISDDSGEGRETEALSRSVINQFEQYVKLNRKIPPEVLVSLNQIDDASKLADTVASHLTIKISDKQELLEIASVVERLERVYAMMEGEIGVLQVEKKIRSRVKRQMEKTQREYYLNEQLKAIQKELGEGEDGRDEVAEIELRIKKTRLSKEAREKAMAEVKKLRSMSPMSAEATVIRNYLDWMLSIPWGKRSKIKKDIKNSEKVLNDDHYGLEKVKERILEYLAVQQRSGKLKGPILCLVGPPGVGKTSLGKSIAKSTGRNFVRVSLGGVRDEAEIRGHRRTYIGSMPGKVVQSMKKAKTNNPLFLFDEIDKMGQDFRGDPSSALLEVLDPEQNSTFSDHYLEVDYDLSDVMFICTANSLRMPQPLLDRMEIIRIPGYTEDEKIEICKRHLIEKQIEAAGLKKGEWSITDEALRDLVRYYTREAGVRSLERELANLTRKAVKEILSKGVKSIKVTPKNLDKYAGVRRHRYGEAELEDLVGTVTGLAWTEVGGELLTIESVMLPGKGRMTITGKLGEVMQESVQAARSFVRARAVAFGVKPPIFDKRDIHVHVPEGATPKDGPSAGIAMVTSIVSVLTGIPVRKDVAMTGEVTLRGRVLPIGGLKEKLLAAHRGGIKTVLIPKENEKDLVEIPDNVKKGLEIIPVSTCEEVLKHALVAELKPIEWSDVDDLSKPAVVEPEKEGDREGVVKH
>NZ_CP041636|2945899:2953926|2951029_2951302_+|WP_144069354.1|DBSCAN-SWA
MNKQDLMAQVRDTSGLSKEQAERAVESVFELITEALRRGEEVRIVGFGSFFVGTRAASPGRNPRTGERIDLPPTKQPKFRAGKTLKEAVG
>NZ_CP041636|2945899:2953926|2948098_2948440_-|WP_144069352.1|DBSCAN-SWA
MTGTESSTGYAQGPARHGILEVAVLDLRGRHAPAFEAALSEAMPLIRRQPGCHSAEVRPCLENPQRYLLVVNWADVAAHEEGFRRSDDYRRWRALLHGFYEPFPLVEHYGPPL
>NZ_CP041636|2945899:2953926|2952106_2952862_-|WP_144069356.1|DBSCAN-SWA
MKLDLGVTGLRVLITGASTGIGAATARVFASCGARVAIHSGSSAEAASALAAEIGATDVVSGDLRQRGSAADIVAAAAEKLGGLDTLVSNAGAIVGRTPLHDFDDAIYDEVMALNVRAVAELARAAHPYLAKSAMASIINTGSIAGRNGGAPGSGVYAATKAAVHSLTRSMAKEFAPAGIRVNAIAPGVIETPFHATTSAEFLDSVCRTIPMGRLGRAEDCCWPIVFLASPMLSGYVTGQIIDVNGGQFMP
>NZ_CP041636|2945899:2953926|2952873_2953926_-|WP_144069357.1|DBSCAN-SWA
MPYLSLANLECRFGEFTAVENLSLDFAEGEFIALLGPSGCGKTTTLRAIAGFVTPSSGSIRLGGRTLFGPHENLPPEQRQMSMIFQSYAIWPHMTVFENVAFGLRLRKLGRDEIERRTRRILEVVHLDQLAERLPAELSGGQQQRVALARAIVVEPKVLLLDEPLSNLDANLREEMRFEIRRLHDEFGITSVYVTHDQTEAMVTADRIVVMNRGRIEQVDSPKQVYDNPQTRFVAGFIGRTNLIDGSFTNGSFSAGSISLPFPAPVEQATALSVRPHRIGMGRSHSAAKQAFEIDGTLRSRVFLGETWEYEVAVPGLAAPLRVSRPPEDLFETGEAVRLALSSAAMVSVR
>NZ_CP041636|2945899:2953926|2945899_2946529_+|WP_144069350.1|DBSCAN-SWA
MEKMVDTYMNMLVPMVVEQTNRGERSYDIYSRLLKERIIFMVGPVNDTMASLVTAQLLFLEAENPNKEISFYINSPGGLVTAGMAIYDTMQYIRPKISTLCIGQAASMGSLLLAAGEKGMRYVLPNARIMVHQPSGGFQGQAADIEIHAKEILDMRARLNALYAKHTGQDVDRIELAMERDRFLTPTEAKEFGLVDEVVDRRPEPVAKK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_144069350.1|2945899_2946529_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	4.5e-57	55.0
WP_144069351.1|2946789_2948052_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.2e-130	58.0
WP_144069352.1|2948098_2948440_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_144069353.1|2948583_2950998_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	3.2e-212	50.4
WP_144069354.1|2951029_2951302_+	HU family DNA-binding protein	A0A1P8CWT5	Bacillus_phage	2.6e-17	50.6
WP_144069355.1|2951371_2951941_+	PAS domain-containing protein	NA	NA	NA	NA
WP_144069356.1|2952106_2952862_-	SDR family oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	2.7e-08	29.7
WP_144069357.1|2952873_2953926_-	ATP-binding cassette domain-containing protein	Q6GZ03	Mycoplasma_phage	2.7e-22	49.0

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP041636|3381410:3389804|DBSCAN-SWA
CATGACTGCTTCCACCGTGAAGACTGGGCCTCTGCTCAGGGTCGAACACCTGACCATGCGTTTCGGCGGTCTGATTGCGGTGAACGATGTGTCCTTCGATGCACATGAAGGCCAGATCACGGCAGTGATCGGCCCGAACGGCGCCGGCAAGACCACGGTGTTCAACTGCATCGCCGGCTTCTACAAGCCGACAGTCGGCCGACTGGCTCTGACCAGGAATGATACGCCATATCTGCTGGAGCGCATGTCCGGCAACGACATTGCAGGCAAGGCGCGCGTGGCGCGCACCTTCCAGAATATCCGTCTCTTCCCGAAGATGACTGTGCTGGAAAACCTGATCGTCGCGCAGCACAACAAGCTGATGCGGGCATCAGGTTTCACGCTGCTTGGCCTGTTCGGCTGGCCGGGATACCGCAAGGCCGAGGCCGCTGCCGTCGATATGGCGCGTTACTGGCTGGAGCGCACCAACCTGACCGATGTCGCCGACGAAGTTGCCGGCAGCCTGCCGTATGGCGGCCAGCGTCGCCTCGAGATCGCGCGCGCCATGTGCACCGAACCGGTGCTGCTGTGTCTTGATGAGCCGGCCGCCGGGCTCAACCCGCGTGAGTCGGCCGACCTGAACACACTGCTGCGTTTTATCCGCGATGAACACAAAACCGGCGTGCTGCTGATCGAGCATGACATGAGTGTGGTGATGCAGATTTCAGATCATGTCATCGTACTGGATTACGGTCGTAAGATTGCCGATGGCTCGCCGGATACCGTGCGAAACGACCCGAAGGTGATCGCTGCCTATCTGGGCGAGCCGGAAGAGGTTGTTGTTGCCGAGGGGATCGCCTGATGCTCTCGATCAGCGGCCTGCATACCTATTACGGCGCGGTGCATGCGCTGAAGGGCGTCGATGTTGAAGTGAAGCAGGGCGAGATTGTAGCGCTGATCGGCGCCAACGGCGCCGGCAAGTCGACCCTGCTGATGAGCATTTGTGGCAGTCCGAAGCCGCGGCATGGTCATGTGAAGCTCGCCAATGAAGACATCACCGGCATTGCCACGCATCATCTGGTGCGTCGCGGTCTGGCGCATGCGCCGGAAGGCCGCCGGATCTTCCCGCGCATGACAGTGCTGGAAAACCTGCGTATGGGCGCAGTCGCCGGCAATCCTGCGCATTTCGAGTCCGATCTTGAGCGTGTCTACGGGTTGTTCCCGCGTCTGAAAGAGCGCAGCGAGCAGCGCGGCGGTACGCTGTCGGGTGGCGAGCAGCAGATGCTGGCCATTGCCCGTGCCCTGATGAGCCGGCCGAAGCTGCTGCTGCTGGACGAACCGTCGCTTGGTCTGGCGCCACTGGTGGTGAAGCAGATTTTCTCGATCATTGAGGAAATCAACCGCGCTGATGGGGTGACGGTCCTACTGGTCGAACAGAATGCCTATCATGCACTCAAGCTTGCCCATCGCGGCTATGTACTGGTGAATGGGCACATCACCATGAGCGGTACCGGCAGCGAGCTGCTGGCTAACGAGCAGATCCGCGCGGCCTATCTGGAAGGAGGGCACTGATGGTGCACGCCATCCTGGGGGAGAGTATCCTGGTATTCCTGGGATTGACCGTTGTCCTGGTGGGCGGTTGCGCCTTCCTGATGGGGCAGGCGATTGCCGGAACCTGGCGGCCCTATTGGCAGATCCTGCCCTACAGCCTGATCATGGCGGCTGCGAACCGCTTCCTGGCTTTCTCGCTGTTCAAGGAGCAGTTGCTGGCGATAGTGCCGTACCTGATCTCTATTTTCGTCGTCTGGGCGTTTGCCACATTCGGCTTCCGGCTGACCCGGGTTGATCAGATGGTGCACCAGTATCCGTGGCTCTACGAACGATCCGGCCTGCTCGGCTGGCGGGAAAAGCAGGGGACACCTTAGGTTGTTGCCGAGGTCGGCCCGACTGCATTAGACTTTGTTCAACGTTGTATAACAGGGAGAGGATGTCATGCGTAAACTCACTACCGGTTTGGCTGTTGTCGCTGCGGTCGGCCTGTTCGCCGGTGCTGCTACGGCACAGATCAAGGTTGCCCTCAACGGTCCGATCACCGGCCAGCTCGCCAGCTTTGGCGAACAGATGAAGCGTGGCGCCGAAATGGCCATCGCCGACATCAATGCTGCTGGCGGCGTCAACGGCCAGAAGCTGCAGCTCGTGATCGGCGATGACCAATGCGATCCGAAGCAGGCGGTGGCGGTTGCCAACCGCGCGGTGCAGGAAAAGGTTGCCGTCGTGTTCGGTCACTTCTGCTCGGGTTCGTCAATCCCGGCCTCGGATGTCTACAAGGAAGAGAATATCCTGCAGATCACCCCGGCCTCGACCAATCCGCGCTACACCGAGCGCGGCTACAAGAACACGTTCCGCGTCTGCGGCCGTGATGACCAGCAGGGCATTGTCGCCGGCGACTACATCCTTGAGAAGTTCAAGGGCAAGAAGGTCGCCATCCTGCATGACAAGACCCCGTATGGTCAGGGCCTTGCCGAAGAGACCAAGAAGCGCCTGAACTCGAAGGGCATGACCGAAGCCATGTTCGAAGCGGTCACCGCTGGCGAGAAGGATTACTCGGCGCTCGTTTCGAAGATGAAGCAGGCCGGTGTCGAGCTGATCTATCTCGGCGGCTATCATCCGGAAGGCGGCCTGATCGTTCGTCAGGCCAAGGAGCAGGGCCTGAATGCTCCGCTCATGGGTGGTGACGCTCTGGTCGACAAGCAGTTCTGGGCGATTTCCGGCCCGGCCGGCGAAGGTTCGCTGATGACCTTCGATGCCGATCCGCGCAAGAACCCGATTGCCAAGCCGCTGGTCGACAAGTTCAAGGCGCAGGGCTACGACCCGGAAGGCTACACGCTCTACACCTATGCTGCGGTTCAGGTCTGGGTGCAGGCTGCCACCACGGCGAAGTCGGTGAAGACCGCTGACGTCGAGAAGGCAATGCGGGCCGGCAAGTTCCAGACCGTGCTGAATGAGATCTCGTTCGACGCCAAGGGTGACACCACCTCGCCGGCGTACAAGGTCTATGTCTGGAAGAATGGCTCCTACGACTACGTGAACTAATCTCCGTATCCGGAGAGTAGGGAAGCCCGGGTCGCCATTCGATATGGCCCCGGGCTTCTTTTTCGGACAAATGTTCGCTAATTGTACGCATGAATGAAAGATGGCAATCCGCCACGGCCAAGCATTTCCCTTGTTGGTAGGGTTGGCACCTGCCACCGGATATTGTAGGGTCCGGCCGTCTTTCCCGAGGTGTCCTGCCGATGTCCAAGCCCACGGTCGCTCTCGCTGCCGATCATGCCGGTTTTGAGTTGAAAAACCTGCTGCGCGATGAGCTTAAGGCCGAGGGCTATGACGTACTCGACCTCGGCACCAATTCTTCCGACAGCGTCGATTACCCCGATTTCGGCCGCCAGCTTGGCCAGACCGTGGCCGCTGGCAAGGCCGCCTTTGGCGTTGCCGTCTGCGGCAGCGGCATTGGCATCTCGATTGCCGCCAACCGCGTCACCGGTTGCCGCGCTGCCCTGGTGCACGATGCCACCAGCGCCCGGCTCTGCCGCGAGCATAACGATGCCAATGTGCTGGCGCTTGGCGCTCGCCTGATCGGCATCGAGACCGCGCGCGACTGCCTCAAGGCTTTTCTCGCCACCCCATTCGCCGGCGGCCGCCATCAGCGCCGCGTCGACAAGCTCGACCAGCCGGCCTGACCGAATACAGACGCTTTAGGAGTCCGCCGATGTCGAGCACCGCAGCCAAGCCAACCGTCACCCATGCCGGCTTTTTCGAGCGCACGCTCAAGCAGGCTGACCCGGAAATCTTTGACTCCATCGTCAAGGAACTGGATCGCCAGCAGAGCCAGATCGAGTTGATCGCCTCGGAAAACATCGTCAGCCGCGCCGTGCTGGAAGCGCAGGGCTCGGTGATGACCAACAAGTATGCCGAAGGCCTGCCGGGCAAGCGCTATTACAACGGCTGTGAATTCGTCGACATCGCAGAAAACCTCGCGATCGAGCGCGCGAAGAAGATCTTCGGCTGCGGCTTCGCCAATGTGCAGCCGCATTCGGGCGCGCAGGCCAACCAGGCGGTCTTCATGGCTATGCTGAAGCCGGGCGACACCTTCATGGGCCTTGACCTCGCGGCTGGCGGCCATCTGACGCACGGCGCATCGGCCAATCAGTCGGGCAAGTGGTTCAATGTTGTCAGCTACACCGTGCGCAAGGACGACATGCGCGTTGATATGGACCAGGTTGCTCAACTGGCCGAGCAACACAAGCCGAAGCTGATCATCGCTGGCGGGTCTGCCTATCCGCGCTTCTGGGATTTCGCGAAGTTCCGTGAGATCGCTGACAGCATAGGCGCGATCTTCATGGTCGATATGGCGCATTTCGCCGGCCTGGTCGCGGGCGGCGCGCATCCGAGCCCGTTCCCGCATGCACATATCGCCACGACCACTACGCACAAGACGCTGCGTGGCCCGCGCGGCGGCATGGTGCTGACCAATGACGAGGCGCTGGCCAAGAAGATCAACTCGGCGGTGTTCCCCGGTCTGCAGGGTGGCCCTCTGATGCATGTGATCGCTGGTAAGGCCGTTGCCTTCGGCGAAGCGCTGACGCCTGAATTCAAGTCCTACGCCCAGGCTGTGGTCGACAACGCCAAGGCGATGGCGGCAGCGCTGCAGGAGCGGGGCTACGACCTCGTGTCCGGCGGCACCGACAATCACCTGATGCTGATCGATTTGCGATCAAAGGGTCTCAAGGGCAATGTCTGCGTCGAGAGTCTGGAACGTGCACGCATCACTGCCAACAAGAACGGCGTGCCCTTCGATCCGGAAAAGCCGACCGTGACGTCTGGTATTCGTGTCGGCAGCCCGGCTGGCACCACGCGCGGTTTCGGCGTCGCCGAATTCCGTCAGATCGGCGGCCTGATCGCCGATGTGCTGGACGGTATTGCCAAGAAGACCAACGACAATTCCGATGTCGAACGCGCTGTGGCGGAGAAGGTGGTGGCGCTTTGCAACCGCTTCCCCATCTATCCGCAGCTCTGACACTATAATCATAAGGCGGGGGAAAACCGACCATGCGTTGTCCGTTCTGCGGCAATGACGACACCCAGGTGAAGGACTCGCGGCCGACCGAAGATAACTCGGCGATCCGCCGCCGGCGCTTCTGTCCGAATTGCGGCGCGCGTTTCACTACCTTCGAACGCATTCAGCTGCGCGAGCTGACCGTGATCAAGAAGAACGGCCTGAAGGCGCCGTTTGATCGTGACAAGCTGGCGCGCTCGATCATGATCGCCACCCGCAAGCGGCCGATCGATCCCGAACGTATCGAGCGCCTGATCAACGGCATCGTGCGACGCCTTGAAAGTTCGGGCGAGAGCGAGATCAAGTCTGACTCGATCGGCGAACTGGTGATGGATGGCCTTGCTGCACTCGACAAGGTGGCCTATGTGCGCTTCGCCTCGGTGTATCGCAACTTCCGCGAAGCCAAGGATTTCGAAGACTTCATTGGTTCGCTGAGTGGCGCCAGCGAAGATGACTGACAAAGCCGCTGCCGCCCGGGACGAGCGCTACATGCGCATCGCGCTCGGGCTGGCGGCGCGCGGGCTGGGTAATACCTGGCCCAACCCGGCCGTCGGCTGTGTGATCGTGAAAGACGGTCGCATTGTCGGTCGCGGTTGGACCCAGGTGGGGGGGCGCCCGCATGCCGAAACCGTCGCCCTGCAGCAGGCTGGTGAATCTGCGCGTGGCGCAACGGCCTATGTCACGCTCGAACCCTGTGCTCATCATGGCAAAACGCCGCCCTGCGCCGAAGCGCTGGTCAGCGCGGGAGTTTCTCGTTGTATTGTCGCGCTGGAAGACCCGGATGCGCGCGTGGCGGGCAGGGGGCTCACGCTGCTGCGTGAAGCCGGTATCGATGTTGCCGTCGGTTACCTGCGGAATGCCGCCGCCGAACTGAATACCGGCTTCCTGCTCAGCCGCGAACGCAACCGTCCTGCCGTCACGCTTAAGCTGGCCGTCAGCCTCGATGGCCGCATCGGCACGCATTCCGGCGACAGCAAATGGATCACCAGTCCGGTGGCACGTATGCGCGCCCATCTGCTGCGTGCCCAGCACGATGCCGTGATGGTGGGCAGCAATACGGCACTGCAGGACGATCCGGATCTGACCTGCCGTCTGCCGGGCCTGCCAAAACGTCCTGCCGTGCGTATTATCCTGGACGGCCGGCTGCGGCTGAGCCTGACCTCGAAAGTGGTGGCGACGGCAAAGCAGACACCGACCTGGATCATCACCCGCGAGGATGTCGAGCCGGCCCGCCGCCAGGCTTTCGAGGATTGTGGCGTCGAGGTGATCGCCGTCGAACCGGACGAAGCGGGCTTTCCGGCCCTGGCACCCGCCTTTGCCATTCTGGCCGAGCGCGGCCTGACACGGATACTGGTGGAAGGCGGCGGGAAACTGGCGGCCAGCCTGATCCGGGCCGATCTGGTCGATCGCATGATCTGGTTCCGTGCCCCCAGCGTGATCGGGGGCGACGGCCTGCCGGGAATTGCCGCTTTTGGCATCGATACCGTGGCGGAAGCGCCACGCTGGCAGCGGGTCAGGGCTGATATTCTTGGCGATGACCTGCTGGAAACCTTCATCCGCCCCCTCTAAAACTAGGCCCATGTTCACAGGCATCGTTACCGATATCGGCACAGTGGTCGCCCGCGAGACGCGCGGCGATACCCATTTCCGCATCCGCACCCGTTATGAGACCGCCAGCATAGACATCGGCGCTTCGATTGCCTGCGCCGGCGTCTGCCTCACCGTCGTGCAGAAAAGCGCCGACTGGTTTGCCGTCGATGTCTCGGCCGAGAGTCTGTCGCGCACCACGCTGGGCAACTGGCAGGATGGCTCGACCATCAACCTCGAACGCAGTCTGAAGGTGGGTGACGAACTCGGCGGCCATATCGTGTCCGGCCATGTCGATGGCGTGGGCGAGGTGGTGGCGACGCGCAACGAAGGCGGCTCGCTGCGCATCGATTTCCGCGCGCCGGCCAGCCTTGCCGGCTTCATTGCCGAAAAGGGTTCGATCACCATCGATGGTGCATCGCTGACCGTGAACGGCGTCGATGGCGCCGTCTTCGGCGTCAACCTGATCCCGCATACCCAACAGGTGACCACGCTCGGCAAGCTGAAGACCGGCGACAGGGTCAATCTGGAAATCGACGTGCTGGCGCGCTACGTGGCGCGGCTGCAGCAATGGAGCAAGTCGTCGTGAACAGTATGGATGACATAAAGCGCTATATCGCCTCGGCCGAGGAAATCATCGAGGAGGCCCGTCAGGGCCGCATGGTAATCCTGGTCGATGAAGAAGATCGCGAGAACGAAGGCGATCTGTATATCCCGGCCGAAATGGCCGATGCGGCCGCTATTAACTTCATGGCGAAGTACGGCCGCGGCCTGATCTGCCTGACACTGACGCGCCAGCGCATCGAGCAGCTCGGCCTGCCGCTGATGGCGCAGAACAATGCCTCGCGACATCAGACCGCTTTTACGGTTTCCATCGAGGCACGCGAAGGCGTCACCACCGGCATCTCCGCGGCCGACCGCGCGCAGACCGTGAAAGTCGCCATCGATCCTTCCAAGGGCCCGGCCGATATCGCGGTGCCCGGCCATATCTTCCCGCTGATGGCGCGCGACGGTGGCACGCTGGTGCGCGCCGGCCATACTGAAGCCGGCGTGGACATCGCGCGGCTGGCCGGCCTCAATCCGTCCGGGGTGATCTGTGAGATCATGAACGACGACGGCACCATGGCCCGCCTGCCGGACCTGATTGCCTTCGCCCAGCATCACAATCTCAAGATCGGCACCATTGCTGACCTGATCGCCTATCGTCGCCGCCACGACAACCTGATCCAGCGTGTGGTGGAAGGCGAGATCGATAGCGTCTGGGGCGGCAAGTTCCGTATGCTGGTTTTCCGCAACCGGGTCGAATATGCCGAGCATATTGCGCTGGTAAAGGGCGACATCGCCGACGGCAATCCCGTCATGGTGCGCATGCATGCCATGAACGTGCTCGAGGATGTGCTGGGCGACCATGGCGCACGTTCGGGCGTGCTGCATGGCGCCATGCAGATGATTGGCGAAGCGGGGCGGGGCATTGTGGTTCTGATCCGCGAGCCGCGGCCGACCGCACTGTCTGACAACGTGCGCCAGAAGATGGGTGAACCAGTTGAAAAAACAGCGTATCTCCGGGATTATGGCATCGGGGCACAGATCCTGATCGATCTGGGGGTTAAGGACATGATCGTCCTGTCAAACGTCGAACGCACCATCGTCGGTCTGGAGGGTTACGGCCTCTCGGTCGTCGAAACTCGACCGATCAAGGTTCGCAGGGAGAACTGA

Protein sequences of DBSCAN-SWA_2

>NZ_CP041636|3381410:3389804|3383380_3384481_+|WP_144069759.1|DBSCAN-SWA
MRKLTTGLAVVAAVGLFAGAATAQIKVALNGPITGQLASFGEQMKRGAEMAIADINAAGGVNGQKLQLVIGDDQCDPKQAVAVANRAVQEKVAVVFGHFCSGSSIPASDVYKEENILQITPASTNPRYTERGYKNTFRVCGRDDQQGIVAGDYILEKFKGKKVAILHDKTPYGQGLAEETKKRLNSKGMTEAMFEAVTAGEKDYSALVSKMKQAGVELIYLGGYHPEGGLIVRQAKEQGLNAPLMGGDALVDKQFWAISGPAGEGSLMTFDADPRKNPIAKPLVDKFKAQGYDPEGYTLYTYAAVQVWVQAATTAKSVKTADVEKAMRAGKFQTVLNEISFDAKGDTTSPAYKVYVWKNGSYDYVN
>NZ_CP041636|3381410:3389804|3388080_3388677_+|WP_144069763.1|DBSCAN-SWA
MFTGIVTDIGTVVARETRGDTHFRIRTRYETASIDIGASIACAGVCLTVVQKSADWFAVDVSAESLSRTTLGNWQDGSTINLERSLKVGDELGGHIVSGHVDGVGEVVATRNEGGSLRIDFRAPASLAGFIAEKGSITIDGASLTVNGVDGAVFGVNLIPHTQQVTTLGKLKTGDRVNLEIDVLARYVARLQQWSKSS
>NZ_CP041636|3381410:3389804|3386494_3386959_+|WP_144069762.1|DBSCAN-SWA
MRCPFCGNDDTQVKDSRPTEDNSAIRRRRFCPNCGARFTTFERIQLRELTVIKKNGLKAPFDRDKLARSIMIATRKRPIDPERIERLINGIVRRLESSGESEIKSDSIGELVMDGLAALDKVAYVRFASVYRNFREAKDFEDFIGSLSGASEDD
>NZ_CP041636|3381410:3389804|3385154_3386462_+|WP_144069761.1|DBSCAN-SWA
MSSTAAKPTVTHAGFFERTLKQADPEIFDSIVKELDRQQSQIELIASENIVSRAVLEAQGSVMTNKYAEGLPGKRYYNGCEFVDIAENLAIERAKKIFGCGFANVQPHSGAQANQAVFMAMLKPGDTFMGLDLAAGGHLTHGASANQSGKWFNVVSYTVRKDDMRVDMDQVAQLAEQHKPKLIIAGGSAYPRFWDFAKFREIADSIGAIFMVDMAHFAGLVAGGAHPSPFPHAHIATTTTHKTLRGPRGGMVLTNDEALAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTPEFKSYAQAVVDNAKAMAAALQERGYDLVSGGTDNHLMLIDLRSKGLKGNVCVESLERARITANKNGVPFDPEKPTVTSGIRVGSPAGTTRGFGVAEFRQIGGLIADVLDGIAKKTNDNSDVERAVAEKVVALCNRFPIYPQL
>NZ_CP041636|3381410:3389804|3382974_3383313_+|WP_144258791.1|DBSCAN-SWA
MGESILVFLGLTVVLVGGCAFLMGQAIAGTWRPYWQILPYSLIMAAANRFLAFSLFKEQLLAIVPYLISIFVVWAFATFGFRLTRVDQMVHQYPWLYERSGLLGWREKQGTP
>NZ_CP041636|3381410:3389804|3388682_3389804_+|WP_144258793.1|DBSCAN-SWA
MDDIKRYIASAEEIIEEARQGRMVILVDEEDRENEGDLYIPAEMADAAAINFMAKYGRGLICLTLTRQRIEQLGLPLMAQNNASRHQTAFTVSIEAREGVTTGISAADRAQTVKVAIDPSKGPADIAVPGHIFPLMARDGGTLVRAGHTEAGVDIARLAGLNPSGVICEIMNDDGTMARLPDLIAFAQHHNLKIGTIADLIAYRRRHDNLIQRVVEGEIDSVWGGKFRMLVFRNRVEYAEHIALVKGDIADGNPVMVRMHAMNVLEDVLGDHGARSGVLHGAMQMIGEAGRGIVVLIREPRPTALSDNVRQKMGEPVEKTAYLRDYGIGAQILIDLGVKDMIVLSNVERTIVGLEGYGLSVVETRPIKVRREN
>NZ_CP041636|3381410:3389804|3386990_3388070_+|WP_144258792.1|DBSCAN-SWA
MRIALGLAARGLGNTWPNPAVGCVIVKDGRIVGRGWTQVGGRPHAETVALQQAGESARGATAYVTLEPCAHHGKTPPCAEALVSAGVSRCIVALEDPDARVAGRGLTLLREAGIDVAVGYLRNAAAELNTGFLLSRERNRPAVTLKLAVSLDGRIGTHSGDSKWITSPVARMRAHLLRAQHDAVMVGSNTALQDDPDLTCRLPGLPKRPAVRIILDGRLRLSLTSKVVATAKQTPTWIITREDVEPARRQAFEDCGVEVIAVEPDEAGFPALAPAFAILAERGLTRILVEGGGKLAASLIRADLVDRMIWFRAPSVIGGDGLPGIAAFGIDTVAEAPRWQRVRADILGDDLLETFIRPL
>NZ_CP041636|3381410:3389804|3384681_3385125_+|WP_144069760.1|DBSCAN-SWA
MSKPTVALAADHAGFELKNLLRDELKAEGYDVLDLGTNSSDSVDYPDFGRQLGQTVAAGKAAFGVAVCGSGIGISIAANRVTGCRAALVHDATSARLCREHNDANVLALGARLIGIETARDCLKAFLATPFAGGRHQRRVDKLDQPA
>NZ_CP041636|3381410:3389804|3381410_3382250_+|WP_144069757.1|DBSCAN-SWA
MTASTVKTGPLLRVEHLTMRFGGLIAVNDVSFDAHEGQITAVIGPNGAGKTTVFNCIAGFYKPTVGRLALTRNDTPYLLERMSGNDIAGKARVARTFQNIRLFPKMTVLENLIVAQHNKLMRASGFTLLGLFGWPGYRKAEAAAVDMARYWLERTNLTDVADEVAGSLPYGGQRRLEIARAMCTEPVLLCLDEPAAGLNPRESADLNTLLRFIRDEHKTGVLLIEHDMSVVMQISDHVIVLDYGRKIADGSPDTVRNDPKVIAAYLGEPEEVVVAEGIA
>NZ_CP041636|3381410:3389804|3382249_3382960_+|WP_144069758.1|DBSCAN-SWA
MLSISGLHTYYGAVHALKGVDVEVKQGEIVALIGANGAGKSTLLMSICGSPKPRHGHVKLANEDITGIATHHLVRRGLAHAPEGRRIFPRMTVLENLRMGAVAGNPAHFESDLERVYGLFPRLKERSEQRGGTLSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPLVVKQIFSIIEEINRADGVTVLLVEQNAYHALKLAHRGYVLVNGHITMSGTGSELLANEQIRAAYLEGGH

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_144069757.1|3381410_3382250_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	9.1e-05	38.2
WP_144069758.1|3382249_3382960_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	7.2e-11	27.6
WP_144258791.1|3382974_3383313_+	hypothetical protein	NA	NA	NA	NA
WP_144069759.1|3383380_3384481_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_144069760.1|3384681_3385125_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA
WP_144069761.1|3385154_3386462_+	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	2.3e-95	52.1
WP_144069762.1|3386494_3386959_+	transcriptional repressor NrdR	NA	NA	NA	NA
WP_144258792.1|3386990_3388070_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	8.9e-45	34.1
WP_144069763.1|3388080_3388677_+	riboflavin synthase	A0A2I2L4R9	Orpheovirus	2.9e-21	37.4
WP_144258793.1|3388682_3389804_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	2.2e-54	40.1

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NZ_CP041636|3448794:3459567|DBSCAN-SWA
ATCAGGCGACCGAGAGGAATTTCGCGGGATCGACCGCCTGCGTGCCACGGCGGATTTCGAAATGCAGCTGTGGCTGGCTGACACCGCCGGTGCTGCCCACCGTGCCAATCGCCTGGCCCTTCGTCACCTTCTGGCCCTTCTTGACCAGCTGCTTGTCGAGATGGGCATAGGCCGTCATCCAGCCATCGGCATGGCGGATCAGCAGCAGGTTGCCGAAGCCCTTCAGCTCGCTGCCGGCATAGACCACTACGCCATTCTCGGCAGCGATCACCGGCGCACCGGCGCGCGCCGCGATATTGATGCCGTCATTGTGCAGGCCATCCGGCGTCGGGCCGAAACCGGCCAGCACGCGACCCCGCACCGGCCATGAGAAAGTGCGGCCCGACCGCGGCGGCAACACGGTATCCTGTTTCGGATCGGCGGTCGGCCCCGCGCTCGACGGCGGTGCGCTGGCCACTTGCGGTGCTGGCGCCGGTGCGGGGGCTGGTGCAGGCGTGTCTGGCGCTGCCTGTTGCGGAATGGGCGGCAGGCCGGCGCTGTTGGGCGCCTCATCGCTCTGCACCGGTGCCGCGACTGTCGCACCGGGCGTTACCGGCAGCGTATCGGCCTGATAGCCGCGCGGCGCAGGCTCCTGCGGCGCGCTTGGGCTTTCTGGCGCAGGCGCGGAGGCCACGGCATAGCCGGTGGACGACGGCACTTTCAGCTGCTGGCCGATGCTGATGCTGTAGGGCTGCGGCAGGTCGTTGGCCTGCGCCAGGCTGTAGAGGTCAACACCGGTGCTGCGCGAAATGCTGTACAGCGTCTCGCCGCGCTGCACGGTATGGAAACGACTCTGCGGCAGGTTCAGGCGCTGGCCGGGCTGCAGTGCATAGGGCGGCTGCAGGCTGTTGTCCTCGATGATTGCACGGACGGGACGATTGTAGCGGCGCGACAGCGCATAGACGGTGTCGCCCGGCTGCACGATCACGGCATCGTCGAGACTGGACGCGGCAGGCGCCGAGGGCTGCTGTTGCACAGGCTGCGTGCGTACCGTCGGCGCGGGTGTCCCGCCCGGCGGCCCGAGCTGCTGCATCTGCACCACGCCCTGCGGTGCAGCCTGTGGCGTTGCACCGGCCGGGCCGCCAGCCTGACTGCTGCTTGGGCTGCGCTGGCTCTGCGTATGCGGCGGCGGCGTACCGGCTGCGACGGAGGGAGGCTGATCGCGATGGCCGAACACCACCGGTGCCGGGGCCTGCTGCCCACAGGCAGCCAGTCCGGTCAGGGTCAGTATGGCCAGAACGCGAATCCGAAACATGATGGCGGAGTCTAAGGCCCTTCCCCGGTTACGACAACGGAAGCCGGCCGTACAAGGCCGGGGCGCCGCACACGGCCCAAAAGCTCAGGTTGCCGCTTCGCGGGCGATTCCGGGCAGCAGCGGCACGAAACGCACCGGCAACAACCGCTCCTCGCGTATGTCATCGCCCTCGCGGGTATAGCGGATCACATCCTGTTCGGTCGTGTTCACCGCCACCGGGGCCACCATGATGCCGCCATTGGGCGAAAGCTGTGCGATCAGGCCGTCTGGCCGCGTATCGGCGGCGGCTGTGACCAGGATGCGGTCGAACGGCGCCTGCTCGATCCAGCCCTTGTTGCCATCGCCGAGTTTCGTGACCACGTTGGTGATCTTCAGCTCGTTCAGCCGTTTCTCGGCGGTGGTCAGCAGCGAGCGGTAGCGCTCGATGGTGTAGACGCGGCGGCTGAGGCGGGCCAGCACGGCGGTCTGGTAGCCCGAGCCGGTGCCGATCTCCAGCACCTTCATGCGGTCGGTCAGCTTCAGCGCCTCGGTCATATAGGCGACCACATAGGGCTGGCTGATCGTCTGGCCCTGCGTGATCGGCAGGGCGATGTTGTCATAGGCGTGTTTCAGGAACTGCTCGGCAACGAACTGCTCGCGCGGCACCCGTTCCATCGCCGCCAGCACGCGGGTGTCACCGATGCCCTGCTTGCGCAGTTCCATCAGCAACTGGATGACGCGGGTGTCCATCGTCTCAAGCAAGGGCGGCCTTCAGCGCCTTCATGCCGGTCTTGTGCGTGAGGTCGAGCTGCAGCGGCGTCACCGAAATTGCGCCGCTCTCGGTCGCGCCGAGATCGGTATGCCGCTTGGCCTTGTTCTTCTGTTTGCGATACCCGATCCAGTAATACGGCACACTGCGCGCATCGACACGGGCATCGAGCAGCAGGTCGGCCAGGTCACGCTTGCCCTGCGGCACCACTTCGATGCCGGTGACGGAGTCTGCCACCACATCGGGGAAGTTCACGTTGATCAGCGTGTCTTTCGCCCAGCCGATCTTGAGCAGCTTCTTGATGACGCGCGGCGCATGGTATTCGGCCGTGCCCCATTTCACCGGATGGCCATGCTGGAAACACTGGCTCAGCGCGATCGACGGCACACCGAGCAGCGAGCCTTCCATGGCGACGGCGACGGTGCCCGAATAGGTCACGTCCTCGCCCAGATTGGCGCCACGGTTGACGCCGGACAGCAGCAGATCGGGCCGCTTGTCCTTGAAGATTTCGTGCATCGCCATCATCACGCAGTCGGTCGGGGTGCCGCGCACGGCGTATTTGCGCGCGTTGATCTTGCGCAGGCGCAGCGGCAGGGTCAGCGTCAGCGAGTGCGAGGCACCCGACTGTTCGTATTCCGGCGCCACCACCCACACATCCTTCGACAGCGAGCGCGCGACCTTCTCCAGGATTTTCAGGCCCGGCGCGTGAATGCCGTCGTCATTGGACACCAGGATACGCATTACTTCCCCACCTTCTCGACTTTTGTCAGCCCGCCCGTATAGGGCCTGAGCACATCCGGCACGCTGATGCTGCCGTCTTCGTTCTGATAGTTTTCCATCACCGCGATCAGCGCGCGGCCGACAGCTAACCCTGAGCCGTTCAGCGTATGCACGAAACGGGTCTGCTTCTCGCCCGGGGCACGGCAGCGCGCATTCATGCGCCGCGCCTGCCAGTCGCCGCAATTCGAGCAGGAGGAAATCTCGCGATACTGGTCCTGGCCCGGCAGCCAGACTTCCAGGTCATAGGTCTTGCGCGCCGCACCGCCCATATCGCCGGCACAGAGCAGCATGGTGCGGAACGGCAGGTCGAGGCGCTTCAAGACCGTCTCGGCTGCTCCGGTCATGCGCTCGTGCTCTTCCACCGACTTGTCGGGTGACACGATGCTGACCAGCTCCACCTTGTTGAACTGATGCTGGCGGATCATGCCGCGCGTGTCGCGGCCAGCCGCACCCGCTTCCGAGCGGAAACAGGCGGTCAGCGCGGTGAAGCGCCAGGGCAGCTCGCTCTCGTCGATGATCAGATCGCGCGCCAGATTGGTCAGCGGCACTTCCGCGGTCGGGATCAGCCAGTAGCCCGTCGTGGTGCGGAACAGGTCGTCGCCGAATTTCGGCAGCTGGCCGGTGCCGAATGCCGTGGCATCGTTCACCAGCATCGGCGGCTGCATCTCGGTATAGCCGAATTCGGAGGTGTGCAGGTCGAGCATGAATTGCCCGAGCGCACGCTCCAGCCGCGCCAGCTGGCTCTTCACCACAGTGAAGCGTGCGCCGGCCAGCTTCACACCATTGGCAAAGTCCATATAGCCAAGCCCTTCGCCGAGGTCGAAATGCTCCTTCGGCTTGAAGCTGTAGTTTTTCGGCGCGCCGGTGCGGCGCTGCTCGACATTGCTTTTCTCGTCCAGACCGTCCGGCACGTCGTCGGCCGGCAGGTTCGGAATGCGCGACAGCGCGTCGGTCAGCGCCTCTTCATGCGCCTTCTGCTCGACTTCCAGGATGCCAAGCCGCTCCTTCAGGCGGGCGACTTCGGTCATCAGCTCGTTGGCGCGAGCCTCGTCCTTCTTGGCCTTGGCGGCGCCGATTTCCTTCGACAGCGTGTTGCGCTTGCCCTGAAGCTCGTCGAATTCGGTCTGGGCGGCGCGGCGCTTGCGGTCCAGTTCGATCAGGGTGACAGACAGCGGCGCGACGCCACGGCGGGCAATGGCCTGGTCGAAAGCCTCCGGATTGTCCCGGATCAGTTTGATGTCATGCATAACGCGTTACCTTCGAGGCACGGCAATCAGGGCCCGGCCGATCAAGGCGCAGGCGGCGTGTAAGGCTCGTCCTTAGCCGGCGCGGCAGTTTCAGTGGTGGCGTTTTCCGCATCCTCGGCGGCCTTTTCGGCGGCTTCTTTCTTGGCGCGGTCGCGCTCGATCAGCTTCACCATGATGATCGAGATTTCGTAGAGCAGGATCAGCGGTACGGCGAGGCCGACCTGGCTGAACACATCGGGTGGCGTCACCACGGCGGCGAACACGAACATGCCGACGATGGCATATTTGCGCTTGGCCGCCAGGCCCGCCGAGGTGGCGATGCCGACCTTGCCCAGCAGCGTAAGCAGCACCGGCAGCTCGAAGGCGATACCGAAGGCGAAGATCAGCGTCATCACCAGCGAAAGATATTCGCTGACCTTGGTTTCGAGCTGGATCGGGATACTGCCCTCGCCGCCCGGCGCCTCGAAGCCGATGAAGAATTTCAGCGCCATCGGCATGATGAAGAAATAGACGAAGGCGCCACCGATCGTGAACAGGATCGGGGTCGCGACCAGGAACGGCACGAAGGCCGACTTCTCATGCTTGTACAGGCCGGGCGCGACGAACATCCAGATCTGCACGGCGATCATCGGGAAGCTGATCAGCATGGCGGCCCAGAAGGCGAGCCGGATATAGGTGAAAAAGGCTTCCTGCGGCGCCGTGAAGATCATGCGGCGGCCTTCGGTGCCGGTCGCCTCGATCAGCGGCTGCATCAGCACGTGATAGATGTATGGCGCCAGGAAATAGCAGGCGGCGAAGGCGATGAAGATCGTGCCGACCGACCACATCAGGCGGTTGCGCAGCTCGATCAGGTGATCGAGCAGCGGCATGCGGGAGGCTTCGACCTCGTCCTCCGGCTTGGCGTCTGTCTTGGTGTCGCTCACGGCTTGGGCGTCTCGGTTTGGACAGCAGCCGGCTGTTCAGGGACCGGCTGTTCAGGGACCGGCGGTTCGACAGGCGCGGCGTCAGGTCCCGGATCGGTGATCCTGGTGGCACCCTCGCCTTTTAGGTCCGAGGTGGCGTCCATGATCGCCTTGTTGTGCTCGGTGAACTGCTTTTCCAGCGAACCGTCGGGATCGAAGGTCTTCTTCACTTCGTTCTCGATCGAGAAATCGCTGACCTGCTTGGCGGCCTTGCGCAGCTCGTCCAGTTCGGTCTCGCGCACCATGTCGTCAATGCCGCTCTGGAATTCACGCGCCATGGCGCGCGCCTTCGCGGTCCATTGCCCGATGCTGCGCAGCACCTTGGGCAGGTCCTTCGGGCCGATGACGATCAACGCCACCACCGCGATCACTCCGAGTTCCGACCAGGCAATGTCGAACATCGCCGCCTACGCTATCCGTGCTGCTGATCCGGCCTGTCCCTAGGAGAGAGACGGCCGGCGGGCTGCTGTTAGTGCTGCGCGGTCTTGTCGGCCGGTGCGCTGCTCGTCGCGCTACCGGTCGGCTGGCCAGGCTGCTGGTTGATGACCGGCGGCGGAGCGTCGGTCTTGTCCTTGTCGTCGCCGGGTTCGGCCATGCCCTTGCGGAAATTCTTGATGCCGGACGCGAGGTCGCCCGCCACCTTCGGCAGCTTGCCGGCCCCGAAGATGATCAGGATCACCAGCAGGACAATCAGCCAGTGCCAAAAACTAAAGCTACCCATACCCTTATCTCCTCCAAAGCGGGGCCCAGGCGGGCCCGGCTCACGCAGGCCGCACTATGGCAGAGATCGCCCGCCCGAGGCAATCTTCGGCCCCCGGACTCTCAGCCCTTCATCGCAGTTAAGCGGCTGGAAAAACGAAGCAGAAATCCGGGTTCAGGCCGAAATGCAGCACGGCGCCGCTGGCCGGCAGCGGTCCGGCCGGCAGGCGGGCGGCAAAGCGCTGCCCGGCAACACCGATCTCAAGCCGGCGATAGGCGCCCAGCGCGGTGGCGCGCTGAACCGTGACGGCGGCGGTGCCGGCGGCATCAGCCCCGGCTTCCTGCAGCGCCTCGGGCCGGAACATCAGCAAAGCAGCACCATCCGGGACCGGCGCCGGCAGGCGACCGAACGGCGTCTCCACCGCGCCGCCGCGCACCTGCACCGGAATTTCATTCGTCTCACTCAGGAAACGGGCCACAAACGGCGTGGCCGGCGCGGCATAAACCTGGGCTGGCGTGTCGATCTGTTCGATCCTGCCGGCATTCATGATGGCGATACGGTCGCCCATGCGCATGGCCTCTTCCGGGTCATGCGTCACCAGCAGCGTCGCCGTGCCGGCCTGTTTCAGCACTTCCACGGTTTCGTCGCGGATCTGGTCGCGCAGCCGGCTGTCCAGGCTGGAAAACGGCTCGTCCAGCAGCATCACGCGCGGCTCAGGCGCCATGGCGCGAGCCAGTGCCACGCGCTGCTGCTCACCGCCCGACAGCTGATGCGGATAGGCCGCCAGCAGCGGCGACAGGCCAAGCCGCCTGCCCCAGCGCTCGATCCGCCCCTGCCGTTCGCCGGCTGCCAAATGGCCAAGCCCGAAGGAAATATTCTGCGCCACGCTTAAGTGCGGGAACAGCGCATGATCCTGGAACACCATGCCGACATGGCGGCGTTCGGTCGGGATGTTGAGGCCGCGGTCGGCCATGATCTCGCCGCCGATGCGGACCACGCCCTGCTGCAGGTCTTCCAGGCCAGCCACCAGACGCAGCGTGGTGGACTTGCCGCAGCCCGAGGGGCCGAGCAGCCCGAGGATTTCACCCTGCGCCACGGTGAAGCTGACGCCATCGACAGCGCGGCGGCGGCCGTAGTCGTGACTGACCGCGCTCAGATCGAGGCTGGCCCTGCTGGTTCTTTCACTGGCGGCGGACCGCTCACTCATCGTCGGAGGCGGACTTTTCCCTGGCGGCCTTCTCGTCGGCTTCCTCGTCCACCAGCGGCTCGAGGAATTCGCGGCCGTCATCATCTTCGTCCAGCGGGTCTTCGCCGGCTTCGTTGAGAGATTCACCCGGCATCGGAATGCCGCCAGATGCCGGCAGGGCTTCCAGCAGGCCGGACGCGCGCAGTTCCTCGATGCCCGGCAGCGCATCGGCGCTTTCGAGGCCGAAATGCACCAGGAATTCGTCCGATGTGCCATAAGTCACCGGGCGACCGGGAACACGCCGGCGGCCGCGCACCTTCACCCAGTCGATTTCCATCAGCAGGTCCAGCGTGCCCTTGCTCAGGCTGACGCCGCGGATCTCCTCGATCTCGGCGCGCGTGCAGGGCTGGTGATAGGCGATGATCGACAGCGTCTCGAGCGCGGCGCGCGACAGCTTGCGCTGCACCTGGCGATGCTCTTCCAGCATGTGCTGCAGGTCGGGCGAGGTCATGAACGCCCAGCGCCCGGCCACCTTCTTCAGCACCACGCCCCGGCTGCGATAAATGTCTTCCAGCGCGGCCAGCACCGCCGGCACGCGGGTGCCGCGCGGCATGCGCTTGCGCAGCGTCGCCTCGTCCAGCGGCTCGGCGGCGGCGAACAGCAGCGCCTCGGCCATGCGGATGGCGGCGGCGAAGACAGCTTCCTTCTCGGCATCGCTCAGGCCGGCTTCGGCGGCGGCGGCTTCGTCGTCTTCGCTGCCCTCTTCGGTGGCGGCAGCCTTCCTGGCGCGGGGCTTGCGCGCCGGCGGCGCGGCTACCTCGGCCGAGGCTTCTTCACCCTCGTCCTCATCTTCGTCGTCTTCATCATCCTCGTCGTCATCCGACTCATCATCGTCAGAATCGTCATCGTCCGAGTCATCGTCATCGGCGTCATCATCATCGGAATCATCGTCGTCATCATCCGAATCATCATCTTCGTCATCGTCATCGTCGCCATCATCGTCGTCCTCGCGACGCTTCGGCGCGGCACCGGCAGACAGTGCGGTGTCATCCGCGTCAGCCTCATCTTCGGCCGCGGCGATGATCTTGATCTCGTCGTCCAGCCGCTCGTCGGCCGGCAGTGCGTCGTAGGACTGCATCACGTATTACTCTTCCGGAGTGGCATTGGTCTCGACCGGCAGATTGCCATGGCCGCGGCGGATATAAATGGTACCGAAGGTCTGCGCCTGCTTCAGCTCGATCAGGCCCTGCTTGGCCATTTCGAGGCTGGCATTGAAGGTCGACGCCAGCGCCGACTTCACGGTGAAGGGATCCTCGGAATCGATGGGCAGGAAGGACTGCAGCGTGGCCCAGTCGGGGATCTGGCCGATCATGTTGCGCAGACGGGCCAGCGCCTCTTCCACCGAGACGATGCGGCGGCGGGCCATCTTCATGGTCAGCACTTCCGTCGACCCCTTGGAGGCGCGGAACTCGGCATAGGCCTTCAGCAGTTCATAGAGCGTGGAGGTGTAGATCGACTTGCGGATGACGCGGACGCCTTCGGGCTGGCCGCGCAGGAACATGGCCAGACCGACCTGATCGCGGCTCATCAGCTGTTCGGAGGCCCGGCGCATGGCTTCCAGCTTCTGCAGCTGGAAGGCCAGGCGGGCAGCGAGGTCGGCGCCCGACGGCTCGCCTTCCTTCTCCGGCTCGGGGATCAGCAGGCGCGACTTCAGGTAGGCCAGCCAGGCGGCCATCACCAGGTAGTCGGCCGCGATCTCGATGCGCACCTTGCGCAGTTCGGCGATGAAGCGGAGATACTGCTCCGCCAGGGCGAGAATGGAAATCTTGCGCAGGTCGACCTTCTGGTCGCGCGCCAGGGCCAGCAGCACGTCGAGCGGGCCCTCGAAAGCATCAAGGCTGAGGATCAGCTGTTCGCCGATGCGTATCCCGTCATCGGCCACCCCGTCGCGATGGGCGGCCTCGAAAGGCTCGGCCCCGGCGGGTGCGCTGTCCGGCGCGGATACAGGTGTCTCGGCAGCCTCGGTCACTACTTTCAAATCCTCGCCTAAACCTTTGATGGGCCGGGGTTGTTAACGACCGTGTCCCGACAATGCAAGCAGGGAATCCGCCAGCCAGTTCACCACCGGAGTGATCAGCGCAAACAACGGGTTCCAGTCGATGCCGAATTGACTGGCCGCCAAGGGCACGGCGAGCAGTAGAATCAGCAACAGCACCATGCCATAGCGCTCCAGCCGGGCCAAGGGACGCGCCAGCGCCAGAGGCAGCAAACCGACCGCGACCCGGCCGCCATCCAGCGGCGGTAAAGGCAACATATTAAATACACATAGTATCAAATTGATCTGAATAGAATTTTCAAGATTCTGCGCCACCCACTGATCGACCGTCTGGCCAAACATCGGCAGCAGGTGAAACAGCAGCAGTGCGATATAGGCCTGCATCAGATTGATGCCGGGCCCGGCGGCCGCGACGATGGCCATGTCGCGGCGCGGCGAAGGCAGGTTGTGGAAGTCGACCGGCACCGGCTTGGCCCAGCCGAACAGGAACGGCGCTTTCACCAGCAGCAGCATGGCCGGCAGCACCACGGTGCCCATCGGATCGACATGTCGCAGCGGATTGAGCGACAGCCTCCCGGCGTCCTTCGCCGTCGGATCGCCGAGCCACCAGGCGACAAAGCCGTGCGCCGCCTCATGCAGGGTGATGGCCAGCAGCGCCGGCAGGATCCAGGTCGAAGCCGTGTAAACGACGTCCATCATGGCCGGTTCAGGCCGTGGCCTGCTCCAGCAGCGCCTGGTGGCGCAGCCGCTCGGCATCGGTGAAGGGCCTGGGCGCCGGCAGCGCGGCCCGGGCATGGGCGACGCGGCGAGCCGCCTCCGGACTCATCGCCGGCAGGGCTGCGAGCAGCGCCTGCATCTCGGGCAGGTCGCCCGAGCAATGCAGCACCAGGTCGCAGCCGGCCTTCAGCGAGGCAACGCCGGTGACGGCCGGGCTGCCCTTCAGCGCCTTCATGGTCAGGTCGTCGGAGATCAGCACGCCATCAAAGCCGATGCGGTCGCGGATCACCCGCTTGATCACGTTGGGCGACAATGTCGCCGGCAGAACGCCATCATAGGCCGTATAGACGATATGGGCGGTCATCGCCCAGGGTGCGTGGCGCAATGCCACGAAGGGCAACAGGTCGCTGCTTTCCAGCACCTCGGCGGGCGTATCGACCACCGGCAAGGCAAGGTGACTGTCGGTATGCGAGCGGCCATGGCCGGGAATGTGCTTGATCACTGGCATGACGCCGGCTTCGGCCAGGCCGCGCATCACTGCTTCGGCAATCAGGGTGACGGTATCGGCGTCGCGGCCATAGGCGCGGTCGCCGATCACGTCATGCGCGCCTTCGATCGGCAGATCGGCCACCGGGGCACAATCGACATCGATGCCAAGGGCTGCGAGTTCGGCGCCGATCCAGCGATAGTTCAGGTAAGCGGCTTCCTCGGCCAGTGCCGGATCGCGGGCATAAAGCTCGCCAAAAGCAGCACCGCGGGGAAAGACCGGCCAGTGTGGCGGCTTCAGGCGGGCGACACGGCCGCCCTCCTGATCGATCAGCACCGGCGCAAGGGCATTGCCCACCACACCGCGGAAATCGTTGATCAGCGCCCTCACCTGCGCCGGGTCAGAAATATTGCGCGCGAACAGGATCAGGCCAAGCGGCTTGCGTACACCGAACAGCACGCGCTCTTCGGACGTCAGCTGCGTGCCGGCACAGCCGACGACGACAGGCGCGTAAGCGCTCCAGTCGACCGATTTAACGTCCGACAACGATGCAGCCCTGGTTCTTGGCAGCCAGCGCGCTGCAGGCAGCCTGCGCAT

Protein sequences of DBSCAN-SWA_3

>NZ_CP041636|3448794:3459567|3453781_3454225_-|WP_144257837.1|DBSCAN-SWA
MFDIAWSELGVIAVVALIVIGPKDLPKVLRSIGQWTAKARAMAREFQSGIDDMVRETELDELRKAAKQVSDFSIENEVKKTFDPDGSLEKQFTEHNKAIMDATSDLKGEGATRITDPGPDAAPVEPPVPEQPVPEQPAAVQTETPKP
>NZ_CP041636|3448794:3459567|3450820_3451576_-|WP_144257835.1|DBSCAN-SWA
MRILVSNDDGIHAPGLKILEKVARSLSKDVWVVAPEYEQSGASHSLTLTLPLRLRKINARKYAVRGTPTDCVMMAMHEIFKDKRPDLLLSGVNRGANLGEDVTYSGTVAVAMEGSLLGVPSIALSQCFQHGHPVKWGTAEYHAPRVIKKLLKIGWAKDTLINVNFPDVVADSVTGIEVVPQGKRDLADLLLDARVDARSVPYYWIGYRKQKNKAKRHTDLGATESGAISVTPLQLDLTHKTGMKALKAALA
>NZ_CP041636|3448794:3459567|3454293_3454545_-|WP_144257838.1|DBSCAN-SWA
MGSFSFWHWLIVLLVILIIFGAGKLPKVAGDLASGIKNFRKGMAEPGDDKDKTDAPPPVINQQPGQPTGSATSSAPADKTAQH
>NZ_CP041636|3448794:3459567|3451575_3452862_-|WP_144257836.1|tRNA|DBSCAN-SWA
MHDIKLIRDNPEAFDQAIARRGVAPLSVTLIELDRKRRAAQTEFDELQGKRNTLSKEIGAAKAKKDEARANELMTEVARLKERLGILEVEQKAHEEALTDALSRIPNLPADDVPDGLDEKSNVEQRRTGAPKNYSFKPKEHFDLGEGLGYMDFANGVKLAGARFTVVKSQLARLERALGQFMLDLHTSEFGYTEMQPPMLVNDATAFGTGQLPKFGDDLFRTTTGYWLIPTAEVPLTNLARDLIIDESELPWRFTALTACFRSEAGAAGRDTRGMIRQHQFNKVELVSIVSPDKSVEEHERMTGAAETVLKRLDLPFRTMLLCAGDMGGAARKTYDLEVWLPGQDQYREISSCSNCGDWQARRMNARCRAPGEKQTRFVHTLNGSGLAVGRALIAVMENYQNEDGSISVPDVLRPYTGGLTKVEKVGK
>NZ_CP041636|3448794:3459567|3448794_3450087_-|WP_144257834.1|DBSCAN-SWA
MFRIRVLAILTLTGLAACGQQAPAPVVFGHRDQPPSVAAGTPPPHTQSQRSPSSSQAGGPAGATPQAAPQGVVQMQQLGPPGGTPAPTVRTQPVQQQPSAPAASSLDDAVIVQPGDTVYALSRRYNRPVRAIIEDNSLQPPYALQPGQRLNLPQSRFHTVQRGETLYSISRSTGVDLYSLAQANDLPQPYSISIGQQLKVPSSTGYAVASAPAPESPSAPQEPAPRGYQADTLPVTPGATVAAPVQSDEAPNSAGLPPIPQQAAPDTPAPAPAPAPAPQVASAPPSSAGPTADPKQDTVLPPRSGRTFSWPVRGRVLAGFGPTPDGLHNDGINIAARAGAPVIAAENGVVVYAGSELKGFGNLLLIRHADGWMTAYAHLDKQLVKKGQKVTKGQAIGTVGSTGGVSQPQLHFEIRRGTQAVDPAKFLSVA
>NZ_CP041636|3448794:3459567|3450171_3450816_-|WP_144258800.1|DBSCAN-SWA
MDTRVIQLLMELRKQGIGDTRVLAAMERVPREQFVAEQFLKHAYDNIALPITQGQTISQPYVVAYMTEALKLTDRMKVLEIGTGSGYQTAVLARLSRRVYTIERYRSLLTTAEKRLNELKITNVVTKLGDGNKGWIEQAPFDRILVTAAADTRPDGLIAQLSPNGGIMVAPVAVNTTEQDVIRYTREGDDIREERLLPVRFVPLLPGIAREAAT
>NZ_CP041636|3448794:3459567|3454663_3455731_-|WP_144257839.1|DBSCAN-SWA
MSERSAASERTSRASLDLSAVSHDYGRRRAVDGVSFTVAQGEILGLLGPSGCGKSTTLRLVAGLEDLQQGVVRIGGEIMADRGLNIPTERRHVGMVFQDHALFPHLSVAQNISFGLGHLAAGERQGRIERWGRRLGLSPLLAAYPHQLSGGEQQRVALARAMAPEPRVMLLDEPFSSLDSRLRDQIRDETVEVLKQAGTATLLVTHDPEEAMRMGDRIAIMNAGRIEQIDTPAQVYAAPATPFVARFLSETNEIPVQVRGGAVETPFGRLPAPVPDGAALLMFRPEALQEAGADAAGTAAVTVQRATALGAYRRLEIGVAGQRFAARLPAGPLPASGAVLHFGLNPDFCFVFPAA
>NZ_CP041636|3448794:3459567|3452903_3453731_-|WP_144258801.1|DBSCAN-SWA
MPLLDHLIELRNRLMWSVGTIFIAFAACYFLAPYIYHVLMQPLIEATGTEGRRMIFTAPQEAFFTYIRLAFWAAMLISFPMIAVQIWMFVAPGLYKHEKSAFVPFLVATPILFTIGGAFVYFFIMPMALKFFIGFEAPGGEGSIPIQLETKVSEYLSLVMTLIFAFGIAFELPVLLTLLGKVGIATSAGLAAKRKYAIVGMFVFAAVVTPPDVFSQVGLAVPLILLYEISIIMVKLIERDRAKKEAAEKAAEDAENATTETAAPAKDEPYTPPAP
>NZ_CP041636|3448794:3459567|3458472_3459567_-|WP_144257841.1|DBSCAN-SWA
MRRLPAARWLPRTRAASLSDVKSVDWSAYAPVVVGCAGTQLTSEERVLFGVRKPLGLILFARNISDPAQVRALINDFRGVVGNALAPVLIDQEGGRVARLKPPHWPVFPRGAAFGELYARDPALAEEAAYLNYRWIGAELAALGIDVDCAPVADLPIEGAHDVIGDRAYGRDADTVTLIAEAVMRGLAEAGVMPVIKHIPGHGRSHTDSHLALPVVDTPAEVLESSDLLPFVALRHAPWAMTAHIVYTAYDGVLPATLSPNVIKRVIRDRIGFDGVLISDDLTMKALKGSPAVTGVASLKAGCDLVLHCSGDLPEMQALLAALPAMSPEAARRVAHARAALPAPRPFTDAERLRHQALLEQATA
>NZ_CP041636|3448794:3459567|3457781_3458462_-|WP_144258803.1|protease|DBSCAN-SWA
MDVVYTASTWILPALLAITLHEAAHGFVAWWLGDPTAKDAGRLSLNPLRHVDPMGTVVLPAMLLLVKAPFLFGWAKPVPVDFHNLPSPRRDMAIVAAAGPGINLMQAYIALLLFHLLPMFGQTVDQWVAQNLENSIQINLILCVFNMLPLPPLDGGRVAVGLLPLALARPLARLERYGMVLLLILLLAVPLAASQFGIDWNPLFALITPVVNWLADSLLALSGHGR
>NZ_CP041636|3448794:3459567|3455723_3456386_-|WP_144257840.1|DBSCAN-SWA
MAEALLFAAAEPLDEATLRKRMPRGTRVPAVLAALEDIYRSRGVVLKKVAGRWAFMTSPDLQHMLEEHRQVQRKLSRAALETLSIIAYHQPCTRAEIEEIRGVSLSKGTLDLLMEIDWVKVRGRRRVPGRPVTYGTSDEFLVHFGLESADALPGIEELRASGLLEALPASGGIPMPGESLNEAGEDPLDEDDDGREFLEPLVDEEADEKAAREKSASDDE
>NZ_CP041636|3448794:3459567|3456854_3457652_-|WP_144258802.1|DBSCAN-SWA
MADDGIRIGEQLILSLDAFEGPLDVLLALARDQKVDLRKISILALAEQYLRFIAELRKVRIEIAADYLVMAAWLAYLKSRLLIPEPEKEGEPSGADLAARLAFQLQKLEAMRRASEQLMSRDQVGLAMFLRGQPEGVRVIRKSIYTSTLYELLKAYAEFRASKGSTEVLTMKMARRRIVSVEEALARLRNMIGQIPDWATLQSFLPIDSEDPFTVKSALASTFNASLEMAKQGLIELKQAQTFGTIYIRRGHGNLPVETNATPEE

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_144257834.1|3448794_3450087_-	peptidoglycan DD-metalloendopeptidase family protein	D7RWE0	Brochothrix_phage	1.1e-12	40.8
WP_144258800.1|3450171_3450816_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.8e-30	48.5
WP_144257835.1|3450820_3451576_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.3e-37	38.1
WP_144257836.1|3451575_3452862_-|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.8e-100	45.6
WP_144258801.1|3452903_3453731_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	2.7e-57	51.0
WP_144257837.1|3453781_3454225_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_144257838.1|3454293_3454545_-	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA
WP_144257839.1|3454663_3455731_-	ATP-binding cassette domain-containing protein	Q6GZ03	Mycoplasma_phage	3.6e-14	42.0
WP_144257840.1|3455723_3456386_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	3.1e-40	45.4
WP_144258802.1|3456854_3457652_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.6e-38	37.8
WP_144258803.1|3457781_3458462_-|protease	site-2 protease family protein	NA	NA	NA	NA
WP_144257841.1|3458472_3459567_-	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	1.3e-22	45.0