CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP041695	Nocardia otitidiscaviarum strain NEB252 chromosome, complete genome	11 crisprs	WYL,cas3,csa3,DEDDh,c2c9_V-U4,Cas14u_CAS-V,cas4,DinG	2	6	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041695_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041695_1

321750-321964

Orphan

Consensus_repeat	Method
TACGGTCAGCAGCCGGGCCAGCCGGGCGGCTACGGCCAGCAGCC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP041695_1

>merge|NZ_CP041695|1|321750-321964|CRISPRCasFinder
TACGGTCAGCAGCCGGGCCAGCCGGGCGGCTACGGCCAGCAGCCCGGTCAGCCGTCCTACGGCCAGTCGGGTGGCTACGGTCAGCAGCCGGGCCAGCCGGGCGGCTACGGCCAGCAGCCGTCCTTCGGCGGCGGCCAGGGCACCGGTCCGCAGTACCAGCAGCAGCCCTCCTACGGTCAGCAGCCGGGCCAGCCGGGTCAGCAGTCCTACGGTCA

>NZ_CP041695|1|1|321750-321964|CRISPRCasFinder
TACGGTCAGCAGCCGGGCCAGCCGGGCGGCTACGGCCAGCAGCC	CGGTCAGCCGTCCTACGGCCAGTCGGGTGGC
TACGGTCAGCAGCCGGGCCAGCCGGGCGGCTACGGCCAGCAGCC	GTCCTTCGGCGGCGGCCAGGGCACCGGTCCGCAGTACCAGCAGCAGCCCTCC
TACGGTCAGCAGCCGGGCCAGCCGGGTCAGCAGTCCTACGGTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041695.1\|WP_143979289.1\|328583_329075_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP041695.1\|WP_029931148.1\|324909_325542_+\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|235544
NZ_CP041695.1\|WP_143979281.1\|314628_314937_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143979283.1\|316708_318181_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|366703
NZ_CP041695.1\|WP_143979285.1\|319915_320830_+\|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|180194
NZ_CP041695.1\|WP_143979279.1\|309541_310939_-\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379258
NZ_CP041695.1\|WP_143979284.1\|318733_319900_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234813
NZ_CP041695.1\|WP_143979288.1\|327265_327724_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143983791.1\|325553_327155_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NZ_CP041695.1\|WP_029931154.1\|329855_330026_-\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|179075
NZ_CP041695.1\|WP_051037720.1\|327867_328491_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|214519
NZ_CP041695.1\|WP_011211513.1\|329260_329515_-\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|184031
NZ_CP041695.1\|WP_143979280.1\|311943_314367_+\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NZ_CP041695.1\|WP_081592715.1\|315101_315410_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143979287.1\|323231_324821_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380149
NZ_CP041695.1\|WP_039817261.1\|310959_311856_+\|bile-acid:sodium-symporter-family-protein	unknown	unknown	gnl\|CDD\|223462
NZ_CP041695.1\|WP_039817163.1\|330037_330274_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_CP041695.1\|WP_143979282.1\|315610_316597_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381306
NZ_CP041695.1\|WP_029931153.1\|329548_329854_-\|30S-ribosomal-protein-S14	unknown	unknown	gnl\|CDD\|181574
NZ_CP041695.1\|WP_029931140.1\|314435_314624_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP041695.1\|WP_143979289.1\|328583_329075_+\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	6.10722e-09
NZ_CP041695.1\|WP_029931148.1\|324909_325542_+\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|235544	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed.	7.9968e-101
NZ_CP041695.1\|WP_143979283.1\|316708_318181_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	9.63656e-39
NZ_CP041695.1\|WP_143979285.1\|319915_320830_+\|succinate--CoA-ligase-subunit-alpha	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
NZ_CP041695.1\|WP_143979279.1\|309541_310939_-\|PucR-family-transcriptional-regulator	gnl\|CDD\|379258	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain. This helix-turn-helix domain is often found at the C-terminus of PucR-like transcriptional regulators such as Bacillus subtilis pucR and is likely to be DNA-binding.	1.65329e-16
NZ_CP041695.1\|WP_143979284.1\|318733_319900_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
NZ_CP041695.1\|WP_143983791.1\|325553_327155_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_CP041695.1\|WP_029931154.1\|329855_330026_-\|50S-ribosomal-protein-L33	gnl\|CDD\|179075	PRK00595, rpmG, 50S ribosomal protein L33; Validated.	6.35839e-21
NZ_CP041695.1\|WP_051037720.1\|327867_328491_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|214519	smart00108, B_lectin, Bulb-type mannose-specific lectin.	5.66526e-21
NZ_CP041695.1\|WP_011211513.1\|329260_329515_-\|30S-ribosomal-protein-S18	gnl\|CDD\|184031	PRK13401, PRK13401, 30S ribosomal protein S18; Provisional.	2.01435e-35
NZ_CP041695.1\|WP_143979280.1\|311943_314367_+\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP041695.1\|WP_039817261.1\|310959_311856_+\|bile-acid:sodium-symporter-family-protein	gnl\|CDD\|223462	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only].	1.28606e-54
NZ_CP041695.1\|WP_143979287.1\|323231_324821_+\|hypothetical-protein	gnl\|CDD\|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	2.20339e-07
NZ_CP041695.1\|WP_039817163.1\|330037_330274_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.81065e-32
NZ_CP041695.1\|WP_143979282.1\|315610_316597_+\|aldo/keto-reductase	gnl\|CDD\|381306	cd19080, AKR_AKR9A_9B, AKR9A and AKR9B families of aldo-keto reductase (AKR). The AKR9A family includes Aspergillus nidulans sterigmatocystin biosynthesis dehydrogenase StcV, Aspergillus flavus norsolorinic acid reductase (NOR), and Phanerochaete chrysosporium aryl-alcohol dehydrogenase [NADP(+)] (AAD), are founding members of aldo-keto reductase family 9 member A1-3 (AKR9A1-3), respectively. StcV may be involved in the dehydration of 5'-hydroxyaverantin to form averufin. NOR is involved in aflatoxin biosynthesis. AAD (EC1.1.1.91) is involved in lignin degradation and reduces aromatic benzaldehydes to their respective alcohols in the presence of NADP(H). The AKR9B family includes Saccharomyces cerevisiae aryl-alcohol dehydrogenases AAD14p, AAD3p, AAD4p, and AAD10p, which are founding members of aldo-keto reductase family 9 member B1-4 (AKR9B1-4), respectively.	4.31479e-141
NZ_CP041695.1\|WP_029931153.1\|329548_329854_-\|30S-ribosomal-protein-S14	gnl\|CDD\|181574	PRK08881, rpsN, 30S ribosomal protein S14; Reviewed.	1.13219e-50

>NZ_CP041695.1|WP_143979285.1|319915_320830_+|succinate--CoA-ligase-subunit-alpha
MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVAHTDKDGNAVELPVFGTVAEAMKETGADVSIAFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAYNVEKGNKTRIIGPNCPGIITPGESLVGITPANITGKGPIGLVSKSGTLTYQMMYELRDFGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEERAAAYIQANVTKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALAREILEKASISA
>NZ_CP041695.1|WP_143979284.1|318733_319900_+|ADP-forming-succinate--CoA-ligase-subunit-beta
MDLFEYQAKELFVKHGVPSSEGRVTDSAEDARAIAEEIGKPVMIKSQVKVGGRGKAGGVKYAATPEDAFTHAQNILGLDIKGHITKKILVAEAKDIASEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDAVKGVDLAFARSIAEQGHLPADILDAAAVTIQKLWEVFISEDATLVEVNPLVRTPDNEILALDGKVTLDENAEFRHPDHAVYADIDATDPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEGHGGVKPANFLDIGGGASAEVMANGLDVILGDKQVKSVFVNVFGGITACDAVANGIVKALEILGDAATKPLVVRLDGNKVEEGRQILVDANHPLVTLAQTMDEGADKAAELAAAK
>NZ_CP041695.1|WP_143979283.1|316708_318181_-|peptidoglycan-DD-metalloendopeptidase-family-protein
MSDGVFPTGRRARANRYRQDDETFGDSGHFSHNAQSGGGTRYEHGQVYGWQAPSSAQGEWNAHGGWDAHAASAQGTADNGYGDNGYGDNWNSGTCYDGASWNNAADADWNSETADWNDGGARGDWHADADGSWNGKTDGSWNGNAANWNRDSGSAWDGDAANGGAGGWGESAAEWSGDSWNSGDDAWESPADPNPSDEHRPVYTFRTASGEPLEFSRDGARVDSAASGAPESAAPASRSATRAARNRRSGGAHRVPAPPAALKGRAAVVAVAAGAVVAAGQTGMDTAPTTGEFQAADQVTELAAQSVSLTGAETQDSGAPQVLNVSTPMDLGSFDDILRKGEQFAADLAAQEAAKLRPLFTKFTSGNFTSGFGARWGVQHLGIDVAAPIGTPIYAVADGVVLEAGPASGFGMWVRLLHDDGTVTVYGHIDTATVSQGQYVMAGDQIATVGNRGFSTGPHCHFEVWLNGVNKIDPVPWLASRGIALGPQRD
>NZ_CP041695.1|WP_143979282.1|315610_316597_+|aldo/keto-reductase
MRYRLFGRTGLRVSELVLGTMALRDADEYRRILDVFAAAGGNFLDTAPMYGPSEELLGSALRDRDRFVIGTKYTPTRDAADPNAAGNHRKNLMLSLEQSLRKLRTDYIDVYWVHVWDRLTPIEETLRALDDAVRSGKVLHLGISDAPAWVVARANTVAELRDRTPFAGLQVPYNLLWRDAERELIPMAEAFGMSVTAWGPLGQGVLSGRAGRRADPGRFTERQRAAAAAVDEVAAELGVPAAHVALAWTRHRSPAVLPIVGVSSAGQLTENLGAVELMLSDEAVETLEAAAPFDLGFPGDFIASCDTAPGIYGEQVSRVDTSGYTLRA
>NZ_CP041695.1|WP_081592715.1|315101_315410_-|hypothetical-protein
MAFVAIVGSGSAQAAPQDCAVERDLFGASAVCQPDGGSNYVLHVDCFGLYASGPFPMYGVGPYTALSYPFTPNGERVTTGCTGMGPGVVAVATNAYVEVYQG
>NZ_CP041695.1|WP_143979281.1|314628_314937_+|hypothetical-protein
MRQGELWMAASSLFGQERRVVLLDADAVVQQNPLLVVALVHPGDEVPAAHRLLSVPIPGTPHVIALYDITIYRRTSLVTYEGAIGGETLEQVKVGMRARFDL
>NZ_CP041695.1|WP_029931140.1|314435_314624_+|hypothetical-protein
MTVLLPDAIATRLRATAGADMNDYVTRAVRQRLLEEDLAELRDRPPDERLGAEAEFEASDAD
>NZ_CP041695.1|WP_143979280.1|311943_314367_+|DNA-helicase-PcrA
MNATVAEDEQKTERLLEGLNPQQRAAVMHTGSPLLIVAGAGSGKTAVLTRRIAYLLAARDVHPGQILAITFTNKAAAEMRERVAGLVGPRAASMWVSTFHSSCVRILRTQAGLVPGLNSNFSIYDADDSRRLLAMIGRDLDIDAKKYTPRLLATAISNLKNELIDPDQAAADAETDDTEFPRVVARVYDEYQRRLRAANALDFDDLIGETVALLQRHPNVAEYYRRRFRHVLVDEYQDTNHAQYILVRELVGHHLAADSEVPPSELCVVGDADQSIYAFRGATIRNIEEFERDFPDAETILLEQNYRSTQHILAAANAVIARNENRREKKLWTDRGDGDLIVGYVADNEHDEASFVAREIDRLVDQGDANYADVAVFYRTNNNSRALEEIFIRMGLPYKVVGGVRFYERKEVRDIVAYLRVLENPNDAVSLRRILNTPRRGIGDRAEACVAVHAEQRGIGFAQALRDAADGKVALLNTRSQRAIAGFLDLLEQIRAAGAQEDLDFPDVGSVVEAVLDRTGYRAELEASDDPQDGARLDNLNELVSVAREFSSEARNNVEAARAEGILPEAAEGEPEPGSLAAFLERVSLVADTDQIPDEGTGVVTLMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPTELAEERRLAYVGITRARKRLYLTRAVVRSGWGQPVSNPESRFLQEIPQHLLDWRRLEPAPKQSSGFRRRRDDEGFERDWTRGDGWSEPRPGVRDRGGERRPAPASAGKRNNTGLVLAVGDRVSDDKYGLGRVVAAEGFGALATVTIDFGTAGKIRLIPQYSRTLVKL
>NZ_CP041695.1|WP_039817261.1|310959_311856_+|bile-acid:sodium-symporter-family-protein
MGSSIFAVFLPLALALVMFGLGLTLTVDDFARVLRYPKAAAIALVCQIVVLPLLCLGMVYLFGLTGALAVGMMLLAASPGGTSANLFSHVAGGDVALNITLTAINSVLAVFTMPVVVTLSLAAFLDDDSGIGLQPDKFLQVIAIVLIPVAIGMVVRRRFTAWAERMRRPVKITSIVVLVLVIVVAAISEFGTFTDNIGRLGAITLLLSILSLLIGYFVPRLFRVDARQSIASAMEIGIHNATLAIAVAVSVLEDETMAIPGAMYGIVMFGPAAVAAWLLARRSARAGADAGSEVRAAT
>NZ_CP041695.1|WP_143979279.1|309541_310939_-|PucR-family-transcriptional-regulator
MSRPTGWHRDTPNTDGCAPAANCVFRRRTPPVLCPATTAPWDSGRTRQRDRGVRLNRQPVADPVIIDGRPLADQLAQRTHAIVTATVEHVRGQVAFYRTLPPEVIRRDVTAIVRRNLELFVTTLHENRDPEPHELLSIEQSARRRAEERVPLTDVISAYHLGVQLWWRTIAELAGPDDADALARAGVLLQRHLQSATRAVLAGYGADQAPIPPQDHDRRRLYRALTSGEDVAEAARSVGRTLAPRYWVVALRVAAHPDERVEGIDATVASRRKLRRLEYALDRLGRGETLHMVTEQGGGALVPAPEVDPESRFEEFAAHLAELGRDIGAETVCAVDSAVPQDIPEVHREVDELLRVALRYHRRSGVVRFADLAVEYQLTRPTRVSRINAAALAPLAGDPSLRLTLETYLAHDSSTTATAAALHVHSNTVLYRLRKITELTGLDTTKTRDLLRMAAALAAAPRESP
>NZ_CP041695.1|WP_143979287.1|323231_324821_+|hypothetical-protein
MSAAKAALARLSDIEPPEPGSGGPGGGFGSLTPERARVLLVVAARASSIALLVIVALVSGALLAAGSGLEGTGGAIAASWLAVHQVPLVIGKTSLGLLPLLPTGLMLWIAARDCAHAVPDESNRADLGWIVGAALGGPLLITAVCLAVADDAAAVVSLQPPNTSAAFGWVFGLHLLAAAAGIGSRRWRELLALSPAPVPHWVVPGVRAGVRAVWRLLLVAAAVTLVSFLAHWSAIGETYRAAGDIAGVLGLTLLSVAYLPNVLIDAVAVLVGGQVHIGAGSLSLFEVTGAPIPAVPIAAAVPTGPAAGWWVVLLLAPAAVGVLGGLDIGRTTDDRPTAPWATLTSAAVAAVLLTLLGSLAGGVLGSFGQIGPNLLLLAIPAFLWLALPGYVGMVAARWFVVPAADPGYAADDDYAADDYADGEYADYDDEYDSDGRYDSDGEYDSDDEYDSDSRYDSDDYEDADYYDEYDEYEDAPDGTERVVEVDGELVDEPPALTAEPHADDPADADIVDAEVVEADLLDTGEVDGR
>NZ_CP041695.1|WP_029931148.1|324909_325542_+|phosphoribosylglycinamide-formyltransferase
MPPTAPASVVVLASGTGSLLRSLLAATREPDYPARVVAVGVDRDCAATAHADEYGIPNFRVALRDFDDRAAWDVALTEAVAAREPDLVVSAGFMKILGPVFLDRFGGRIINTHPALLPAFPGAHGVRDALAYGVKVTGSTVHLVDAGVDTGPILAQEAVAVLPADDEASLHERIKVVERRLLAEVVAAVATRGIVSDGRKAVIPDERVLR
>NZ_CP041695.1|WP_143983791.1|325553_327155_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MDPAARKPIKRALVSVYDKTGLIELASGLHAAGVELVSTGSTAGKIADAGIPVTKVEDLTGFPETLDGRVKTLHPRVHAGILADTRRAEHVDQLVELGVEAFQLVVVNLYPFTQTVASGATVDECVEQIDIGGPSMVRAAAKNHPSVAVVVDTRDYDDVLASVRDGGFTLARRTELAAKAFQHTATYDVAVASWMTSVAVPAAAPAAVSEGVESEGAQRFPEWIGATWTRESVLRYGENPHQAAALYTDAAGPAGLAQAQQLHGKEMSYNNYTDADAAWRAAYDFEAPAVAIIKHANPCGIAVGADIAEAHRKAHACDPVSAYGGVIAANREVSVEMAEQVAEIFTEVIVAPGYADGAVDVLRRKKNVRILIAEAPRRKGAELRPVSGGVLLQDRDILDAAGDAPANWQLVAGDAASAETLADLEFAWRACRAVKSNAILLAHDGASVGVGMGQVNRVDAVQLAVQRAGDRAKGSVAASDAFFPFSDGPQQLVAAGITAIVQPGGSIRDKDTIDLCREAGVTLYFTGARHFAH
>NZ_CP041695.1|WP_143979288.1|327265_327724_-|hypothetical-protein
MYGNWGRRLAAATTAGLLSLTIAACSSSDDNADTPRGTTASTTETTPTEAPEGQLGRAFTADPTIVNPRPIPFDSWTRLAPDKIAVNFQTGSPECYGVDATTTETDESVTVELRAGTRPEAVGRMCTMIAVFGTLEIQLEKPLGDRTVLSAK
>NZ_CP041695.1|WP_051037720.1|327867_328491_+|LysM-peptidoglycan-binding-domain-containing-protein
MRECTSPAIDLPKIPPPKGRIVGDALHVGEELGLGQSLKGGAYTLTLQNDGNLVLTEPDGNVVWHTSTHDQGVERAVLQADGNFVLYKGEGAAWSTETNGKDADRLVVQPDRNVVLYGKDGGALWSSGTNTDNPIQAEPEAVAAPAAEAPAPPPAPEVRTHTVAPGETLWAIAEQYYGDGNRYPEIASASGIDNPDLINVGQVLTIP
>NZ_CP041695.1|WP_143979289.1|328583_329075_+|SRPBCC-family-protein
MCAMSLGYVPVTVESTCRTSAATAMEVIAPIDLPTIFTGMGPLPAVREVRDQSGPWDTAGNTRTVVLSDGSTAREELTGYTRARHFSYELTEFTGTMRRLVAKVDGEWTFTPAGRNSLVRWTYSFFPHPGRTRLVRYIVAPLWRRYATATLARAIREAEQATV
>NZ_CP041695.1|WP_011211513.1|329260_329515_-|30S-ribosomal-protein-S18
MAVKRAPSKKVRAEQARRPKKNPLIAAGIETVDYKDVNLLRTFISDRGKIRSRRVTGLTPQQQRQVAVAVKNAREMALLPFTSR
>NZ_CP041695.1|WP_029931153.1|329548_329854_-|30S-ribosomal-protein-S14
MAKKSKIEKNERRKIVVARYAERRAELKELIRKPTTSDADRAAAQTALQKLPRDASPVRLRNRDASDGRPRGHLRKFGLSRVRVREMAHRGELPGVHKSSW
>NZ_CP041695.1|WP_029931154.1|329855_330026_-|50S-ribosomal-protein-L33
MASKSTELRPVIKLKSTAGTGYTYVTRKNRRNDPDRMVLKKYDPVVRKHVDFREER
>NZ_CP041695.1|WP_039817163.1|330037_330274_-|50S-ribosomal-protein-L28
MSAICQVTGRKPGFGKSVSHSHKRTNRRWNPNIQRKTYYLPSEDRRITLTVSTKGIKTIDRDGIEAVVARLRARGEKI

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Crispr_ID: NZ_CP041695_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041695_2

839956-840064

Orphan

Consensus_repeat	Method
CGAATGTGCCGGGCACTCAGCCGGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP041695_2

>merge|NZ_CP041695|2|839956-840064|CRISPRCasFinder
CGGAAAGCCCGGCCCCCCAGCCGGATCCATCCGCGACTGCGCCGAATGTGCCGGGCACTCAGCCGGATGTGCCGGGTGTTCGGCCGGATGTGCCGGGCGCTCAGTCGGA

>NZ_CP041695|2|2|839956-840064|CRISPRCasFinder
CGGAAAGCCCGGCCCCCCAGCCGGA	TCCATCCGCGACTGCGC
CGAATGTGCCGGGCACTCAGCCGGA	TGTGCCGGGTGTTCGGC
CGGATGTGCCGGGCGCTCAGTCGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041695.1\|WP_029931579.1\|837501_838179_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP041695.1\|WP_143979627.1\|845947_846625_-\|5,6-dimethylbenzimidazole-synthase	unknown	unknown	gnl\|CDD\|380321
NZ_CP041695.1\|WP_143979626.1\|844642_845935_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|181597
NZ_CP041695.1\|WP_143983841.1\|833998_835453_+\|adenosylhomocysteinase	unknown	unknown	gnl\|CDD\|377487
NZ_CP041695.1\|WP_143979631.1\|851656_853078_-\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	unknown	unknown	gnl\|CDD\|274360
NZ_CP041695.1\|WP_143979622.1\|835568_836672_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176510
NZ_CP041695.1\|WP_143983840.1\|827509_829003_+\|GHKL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225827
NZ_CP041695.1\|WP_143983842.1\|850941_851598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143979630.1\|849605_850760_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|99812
NZ_CP041695.1\|WP_143979624.1\|840790_842605_+\|MtrAB-system-accessory-protein-LpqB	unknown	unknown	gnl\|CDD\|237449
NZ_CP041695.1\|WP_085996472.1\|843875_844514_+\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|129824
NZ_CP041695.1\|WP_143979621.1\|831583_833674_-\|NAD(+)-synthase	unknown	unknown	gnl\|CDD\|235057
NZ_CP041695.1\|WP_115061594.1\|830225_831383_+\|alkane-1-monooxygenase	unknown	unknown	gnl\|CDD\|239589
NZ_CP041695.1\|WP_143979623.1\|836774_837422_+\|dTMP-kinase	unknown	unknown	gnl\|CDD\|236133
NZ_CP041695.1\|WP_143979629.1\|848078_849500_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|225779
NZ_CP041695.1\|WP_143979628.1\|846729_847983_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|225779
NZ_CP041695.1\|WP_143979620.1\|825949_827326_-\|cation:dicarboxylase-symporter-family-transporter	unknown	unknown	gnl\|CDD\|234968
NZ_CP041695.1\|WP_143979625.1\|842963_843608_+\|ComF-family-protein	unknown	unknown	gnl\|CDD\|223970
NZ_CP041695.1\|WP_143979619.1\|825367_825808_+\|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl\|CDD\|237096
NZ_CP041695.1\|WP_029931573.1\|829189_829882_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931

Protein	Function_ID	Function_description	E-value
NZ_CP041695.1\|WP_029931579.1\|837501_838179_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.36125e-87
NZ_CP041695.1\|WP_143979627.1\|845947_846625_-\|5,6-dimethylbenzimidazole-synthase	gnl\|CDD\|380321	cd02145, BluB, 5,6-dimethylbenzimidazole synthase. BluB catalyzes the O2-dependent conversion of FMNH2 to 5,6-dimethylbenzimidazole (DMB), a component of vitamin B12; is is a subfamily of the nitroreductase family; nitroreductases typically reduce their substrates by using NAD(P)H as electron donor and often use FMN as a cofactor.	1.84927e-68
NZ_CP041695.1\|WP_143979626.1\|844642_845935_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|181597	PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed.	4.48735e-152
NZ_CP041695.1\|WP_143983841.1\|833998_835453_+\|adenosylhomocysteinase	gnl\|CDD\|377487	pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase.	0
NZ_CP041695.1\|WP_143979631.1\|851656_853078_-\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	gnl\|CDD\|274360	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase. [Unknown function, Enzymes of unknown specificity].	1.73448e-158
NZ_CP041695.1\|WP_143979622.1\|835568_836672_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176510	cd08567, GDPD_SpGDE_like, Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.	3.87521e-98
NZ_CP041695.1\|WP_143983840.1\|827509_829003_+\|GHKL-domain-containing-protein	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	4.40945e-118
NZ_CP041695.1\|WP_143979630.1\|849605_850760_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|99812	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	8.27279e-116
NZ_CP041695.1\|WP_143979624.1\|840790_842605_+\|MtrAB-system-accessory-protein-LpqB	gnl\|CDD\|237449	PRK13616, PRK13616, MtrAB system accessory protein LpqB.	0
NZ_CP041695.1\|WP_085996472.1\|843875_844514_+\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|129824	TIGR00741, Probable_sigma54_modulation_protein_ORF3_ORF95., ribosomal subunit interface protein. This model includes a small protein encoded by one of two genes, both downstream of the gene rpoN for sigma 54, whose deletion leads to increased expression from sigma 54-dependent promoters. It also includes the N-terminal half of a light-repressed protein LtrA of Synechococcus PCC 7002 and the N-terminal region (after removal of the transit peptide) of a larger plastid-specific ribosomal protein of spinach. The member of this family from E. coli is now recognized as a protein at the interace between ribosomal large and small subunits, with about 1/3 as many copies per cell as the number of ribosomes. [Protein synthesis, Translation factors].	2.27141e-31
NZ_CP041695.1\|WP_143979621.1\|831583_833674_-\|NAD(+)-synthase	gnl\|CDD\|235057	PRK02628, nadE, NAD synthetase; Reviewed.	0
NZ_CP041695.1\|WP_115061594.1\|830225_831383_+\|alkane-1-monooxygenase	gnl\|CDD\|239589	cd03512, Alkane-hydroxylase, Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases. The alk genes in Pseudomonas oleovorans encode conversion of alkanes to acyl CoA. The alkane omega-hydroxylase (AlkB) system is responsible for the initial oxidation of inactivated alkanes. It is a three-component system comprising a soluble NADH-rubredoxin reductase (AlkT), a soluble rubredoxin (AlkG), and the integral membrane oxygenase (AlkB). AlkB utilizes the oxygen rebound mechanism to hydroxylate alkanes. This mechanism involves homolytic cleavage of the C-H bond by an electrophilic metal-oxo intermediate to generate a substrate-based radical. As with other members of this superfamily, this domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. The active site structure of AlkB is not known, however, spectroscopic and genetic evidence points to a nitrogen-rich coordination environment located in the cytoplasm with as many as eight histidines coordinating the two iron ions and a carboxylate residue bridging the two metals. Like all other members of this superfamily, there are eight conserved histidines seen in the histidine cluster motifs: HXXXH, HXXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homolog, stearoyl CoA desaturase. Also included in this CD are terminal alkane hydroxylases (AlkM), xylene monooxygenase hydroxylases (XylM), p-cymene monooxygenase hydroxylases (CymAa), and other related proteins.	9.55642e-142
NZ_CP041695.1\|WP_143979623.1\|836774_837422_+\|dTMP-kinase	gnl\|CDD\|236133	PRK07933, PRK07933, dTMP kinase.	5.74981e-101
NZ_CP041695.1\|WP_143979629.1\|848078_849500_-\|fatty-acid-desaturase	gnl\|CDD\|225779	COG3239, DesA, Fatty acid desaturase [Lipid metabolism].	5.40056e-49
NZ_CP041695.1\|WP_143979628.1\|846729_847983_-\|fatty-acid-desaturase	gnl\|CDD\|225779	COG3239, DesA, Fatty acid desaturase [Lipid metabolism].	3.25771e-50
NZ_CP041695.1\|WP_143979620.1\|825949_827326_-\|cation:dicarboxylase-symporter-family-transporter	gnl\|CDD\|234968	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed.	4.60279e-151
NZ_CP041695.1\|WP_143979625.1\|842963_843608_+\|ComF-family-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	3.2183e-25
NZ_CP041695.1\|WP_143979619.1\|825367_825808_+\|6,7-dimethyl-8-ribityllumazine-synthase	gnl\|CDD\|237096	PRK12419, PRK12419, 6,7-dimethyl-8-ribityllumazine synthase.	6.98376e-66
NZ_CP041695.1\|WP_029931573.1\|829189_829882_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	1.83352e-62

>NZ_CP041695.1|WP_029931579.1|837501_838179_+|response-regulator-transcription-factor
MKPKILVVDDDMALAEMLTIVLRGEGFDPHVVGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIVKPFKPKELVARVRARLRRTEEEPQELLSIADIVIDVPAHKVTRGGQQISLTPLEFDLLVALARKPRQVFTREVLLEQVWGYRHAADTRLVNVHVQRLRAKVEKDPENPEIVLTVRGVGYKAGPP
>NZ_CP041695.1|WP_143979623.1|836774_837422_+|dTMP-kinase
MGALVAVEGLDGAGKRTLTDAVVTALRARGLRVATLAFPRYGRSVHADLAAESLRGGHGDVAASVHAMALLFALDRADARDELSKLLVDNDIVLLDRYVASNLAYSAARREQDSRGEIARWIEDLEFGRFELPVPDLQVLLSVPTEVAEERARKRGEADTARALDAYEKDGGLQRRTAKVYSELAETQWRGPWWVHRSGDDPATLAARLAEIVAG
>NZ_CP041695.1|WP_143979622.1|835568_836672_-|glycerophosphodiester-phosphodiesterase
MTSLHARSTTTRTVAALGVAVAALALTACGSDDPDSTAPTTSAASAAADPNRPFDLQAHRGGRGLTIEESLPGFAKAIELGVSTLELDIVLTRDKVPLIWHDPEIEDEKCSDTAPATPDDPQYPYVGKLVHDLTYTQIQTLDCGKRLADFPTAQELPGNRIATLPELFDLVKTYPGAFEGLRYNIETKIEAEDRDESATPEEFVDVILAAVDAAGATDKVEIQSFDWRSLPLVKAKNPAVPTVALYDDSTFTAGSAWLGPIRYEDHRDDPLAAVKALGADIASPSYVNPWDSDAKLGDAGFTLVTDSAYVRRAHELGLRVVPWTVNDKATLAAVIDQGVDGVITDYPDRAREVMREKGMPLPASYTR
>NZ_CP041695.1|WP_143983841.1|833998_835453_+|adenosylhomocysteinase
MMTPDVRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYADVQPLRGARISGSLHMTVQTAVLIETLVDLGAQVRWASCNIFSTQDHAAAAVVVGPHGTVDEPKGTPVFAWKGETLEEYWWAAEQMLTWPDEPANMILDDGGDATMLVLRGAQFEKAGVVPPADENHSAEYTVFLNLLRERFETDKGKWTAIAESVKGVTEETTTGVLRLYQFAAAGELSFPAINVNDSVTKSKFDNKYGTRHSLIDGINRGTDVLIGGKKVLICGYGDVGKGCAESMAGQGARVQVTEIDPINALQALMDGFDVVTVEQAIGEADIVITSTGNKDIILLDHMKAMKDQAILGNIGHFDNEIDMAALERSGAARLNIKPQVDLWTFPDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKPEEYDNEVYRLPKVLDEKVAKIHVEALGGTLTKLTKDQAEYIGVDVEGPFKPEHYRY
>NZ_CP041695.1|WP_143979621.1|831583_833674_-|NAD(+)-synthase
MIDWPGRKGPPVTQQLPFDSLYRHGFARVAVAVPRVRVADPAYNAEQTLVLARQAAERGAVLTVFPELGLSSYTADDLFHQDALDDAVGAALARIVAESVDIATVLVVGAPVRTQGRLFNCGIVIQGGRVLGAAPKSYLPNYREFYEKRQYAAARESLDDHITIAGQRVPFGDDLLFQAANVPGFVAHLEICEDGWVPLPPSGFAALAGATVLVNLSASNIVIGKADYRRELCTSHSARYMAAYLYSAAGHGESTTDMAWDGQALICENGNLLAEGERFAAQPQLVTADIDLHRLAADRLRMTSFADNVHDHRDRLRRFRRIELGLPVPAGAVPLRREIPRFPYVPADPASRNERCAEVHHIQVEGLSTRMAATGSQRVVIGVSGGLDSTVALIVAAKTMDRLGLPRSNVLAYTMPGFGTSTRTLEDARRLMRAVGATAHEIDIRPSSTQMLRDLGHPAAEGAPQYDVTYENVQAGDRTSHLFRLANMHRALVVGTGDLSELALGWCTFGVGDHMAHYSVNASVPKTLVKFLVAWTIDTDGLGPEASEVLKSILATEISPELIPGDSDAPAQSSEATVGPYELQDFHLYHLLRFGDRPSRIAYLARHAWGDRTRGRWPDLIPADQRNEYDLATIKHWLGEFLHRFVQTSQFKRSTLPNAPKVGSGGSLSPRGDWRAPSDASAAAWLDELHRNVPDR
>NZ_CP041695.1|WP_115061594.1|830225_831383_+|alkane-1-monooxygenase
MVGKRSGSPDPKRHLWVLGLIAPGCALLPSQLVLHTGSEVFWWIGPIIVLIVIPVLDWVVGEDGTNPRDEDYELLSNDRYYRWCTYLFLPIQLIGLIIACYMWAGDELTLTDKLGLAATLGFVSGIGINAAHELGHRVEHLERWLSKIALAQSGYGHFFVEHNRGHHARVATPDDPASARMGESLWGFLPRSIFGGFRSAITLERDRLRRKGHGWWSIHNHILQAWSMTLVLFGGLLLAFGWAVLPYLLLQAVIGAGLLETVNYVEHYGLLRRRRANGHWARCSPRDSWNSDRLVTNIFLFHLQRHSDHHANPGRRYQTLRSSDEAPQLPAGYATMIVLALIPPLWRLVMDPRLLAHYGGDVSQANLHPRKRTRLLTRYGVTTAA
>NZ_CP041695.1|WP_029931573.1|829189_829882_+|response-regulator
MIRVLVVEDEPAIASAHRSYVARVPGFEPVAVAHSGRAALDAVAKAARADEPIDLVLMDIGLPDMSGLEVAAVLARSRRRPDVIAITSARDLEVVRAAVAHGVVLYLLKPFTFAAFRDKLERYLEFRAALPDTTDAVSQQDIDRAFGALRTTDTRVGTPKGLAPQTLQEITRVLRDADAGLTAGDAGRAIGVSRVTAWRYLERLADDGVVRRQTDYGRTGRPRVRYVWGR
>NZ_CP041695.1|WP_143983840.1|827509_829003_+|GHKL-domain-containing-protein
MVLALVIGAGTALGVWQTRRERDEATRRQVIDVAVTLAQAPSTLAALRSPDPPALLQPVTERIRTSVGMDFIVVMAPDRTRYTHTDPGRIGKPFSGTIDRALAGETFTETYAGSLGPSMRAVTPVRDGDGRIVALVSAGVTRARIGDQVEDRLPGILGIAAAGLVLATIGSLLLRRRLLRQTHGLAPDELRALYEHHEAVLHSVHEGLLVFDAEGEDAVVVNDEARRLLGLPEGWVRRADLPQSLRQLGSDAVRDEMHVTPDHVLVVNQDVVERDGRRIGTVVTLRDHTELRDVLGELDSVRGFADALRAQAHEAANRLHTVITMVELGHTRQAVDFATAELELTQSLIDRMTGAVAEPAVVALLLGKVEQAAEFGIELTVSGDTALESTDPLTPNEMVTLLGNLIDNALDAVGRDDDAWVEVTVRNDPEGLFVRVADSGAGMSEEVFTRATERGYSTKTDHHGLGLALVRRLVTRHGGELRAVRTPESAVVVRFQR
>NZ_CP041695.1|WP_143979620.1|825949_827326_-|cation:dicarboxylase-symporter-family-transporter
MSETAVHGETTGRRPRRDRTHWLYSAVIVAVLAGILVGWLAPGFGKSVGELGALFVSLIKMMIAPVIFCTIVLGIGSVRAAARVGKVGGMAVAYFLLMSTAALAIGLVVGNLLQPGTGLDLSANAGAAAKYAEDAHGAGGTWDFISGIVPTTLVSSLTAGSVLQALFVALLVGFAIQAMGPTGEPLLRGVALLQKLVFRILTMILWLAPVGAFGAIANVVARTGLDAVKQLAVLMIAFYLTCVVFVFGVLGVLMWAVAKVSIFKLVRYLAREYLLIVATSSSESALPRLIAKMEHLGVERTTVGVVVPTGYSFNLDGTAIYLTMATLFIADAMGQPLAWSEQLGLLLFMIVASKGAAGVTGAGLATLAGGLQSHRPDLLDGVGIIVGIDRFMSEARALTNFSGNAVATVLVGTWTRTVDAGQVRDVLDRKLPFDETTMVDDHPAPAPEAEGKKTLVSA
>NZ_CP041695.1|WP_143979619.1|825367_825808_+|6,7-dimethyl-8-ribityllumazine-synthase
MSPTRIALVAARWHADIVDRAVEAARIALADHGFTEVDVIEVPGAFEIPLRVRRLAASGEYAGIAGVALVVDGGIYRHDFVAATVVDALMRVQLETDVPVFSAVLTPHHFHEHAEHLEYFARHFTVKGTELANAIAATVNVPAAAS
>NZ_CP041695.1|WP_143979624.1|840790_842605_+|MtrAB-system-accessory-protein-LpqB
MRLRRIGLLAVLVGSLSGMVGCAQLPDSSAPQALGTLDRQPTSTEPAPPIVGREPEALLQDFVQATADPANRHQAARQFLTPAAAVNWDDAEGTTIIEKPDTLRESRTEDTATYVIRTRKIGELEADGSYRVADGTLEDKVKLVKIDGEWRIDDLPTGVLIERSAFNKSYRRHALYFSNQAGTVMVPDLRWIAAPKEQLTQKLLGLLAEGPQPALTPAVKNVLSGPVSLRGPVTKANGEQEAVGVGAGGVLIDFSGAAGLDTRSKELLAAQVVLTLSEAEIFGPFMLLADGKPLDERYALNGWTRQDVEALSPSEAARNRIGLHAVRDGSLVRVTDNGIVPAPGFFGTTRTLQSVGLSPDGQLVAAVADSGRPEPEPGRTLIIGTYDGTGFPVATGGLITRPSWTSDGTSAWAVVDGERVIRAVHDRASGNVSVQDVDISALIAPVASATGALTPRLPITDLRISPSGVRAALIAGGKVYLAVVEPRPEGRYALTAPLPIAPELSTAAVSLDWYTQNTQMDSVMIAREGTVDPIVRVPIDGSGLNSVTSQNLTPPLRVVAAASDRQYVADARDVMELTSSAEGGERYWRVVPGLGANAIPVLPG
>NZ_CP041695.1|WP_143979625.1|842963_843608_+|ComF-family-protein
MGELLDLVLPRTCCGCGAGGFGWCAECAVTLAGPPVRARPRADPGVPCWALAPYAGPARRAVLAVKEQCRRELADPLGLAVARGLDRLRDHARPLVLVPAPSRRSAARRRGGDPVVRTALVAASWLPDCRMARLLRTRPGVRDSVGLSPGDREHNLRGRIITARPSRHAVPIPANAEVVLMDDVLTTGVTARESVRALTGAGVPVRAVFVTCRA
>NZ_CP041695.1|WP_085996472.1|843875_844514_+|ribosome-associated-translation-inhibitor-RaiA
MKADVVVKGRNVEVPDHFRIHVADKLSRLERFDPSIFLFDVELFHERNRRQRKSCQRVEITARGKGPVVRAEACADSFYAALELVVAKLESRLRKLKDRRRVHHGEKTPISVAEATAGLIDDSLFASSNGNGAAKAHDHAAEAVDEGQEYAGPGHIVRTKTHPAIPMSVDDALYQMELVGHDFFLFHDKESDQPSVVYRRHAFDYGLIRLAE
>NZ_CP041695.1|WP_143979626.1|844642_845935_+|acetyl-CoA-C-acyltransferase
MATKGARRAVIVSGARTPFVRAFSDYTRMDSIDLADTAVRGLLARTGLPKAAVQAIVWGGVILPGAAPNIAREIALDLELDSGCEGYTVTRACASGLQAVTSAAAAIERGEYDIMIAGGSDSTSNAEVKLPQKVVHAAAPLALGKPKPKDYLAAVAQLAPFVDIVPRRPKIQERTTGEVMGESAEKMARIHGITRAAQDEFAVRSHHRAAAAIDSGRFDSEVLSVTTPEGKTVTRDGLVRPGTSVEKLATLAPVFAKDGTVTAGNASPLTDGASAVLLMSEDKAFELGFEPLAAFRSWSYVSVDPRDQVLIGPAISMPRALDKAGMSLSDVDLVDIHEAFAAQTLSVVSALASTDWAKTRLDRDTAVGAIDPATLNVHGGSVSLGHPFGATGARMVTTMANELARTGKSTALLGICAAGGIGASAVLERV
>NZ_CP041695.1|WP_143979627.1|845947_846625_-|5,6-dimethylbenzimidazole-synthase
MDVCAEGPLAPAEYPNVYDVIRLRRDVRAEFTGAVVDDATLLRILDAAHRAPSVGNSMPWDFVVVRDRDTLRTFADHVADKRRAFHASLPEDRARTFDPIKIEGIVESGTGIVVTHDQSRGGTHVLGRATVPETGLYSTILAIQNLWLAATAEGVGVGWVSFYDTPYLAELIGVPEGVKPVAWLCVGPVREFQEIPDLERFGWRNRRPLEAAVHWERFPSREQRA
>NZ_CP041695.1|WP_143979628.1|846729_847983_-|fatty-acid-desaturase
MAISDVKEYAHLTPEDVEAIGAELDAIRREIESSRGERDAKYIRNVIRLQRGLEISGRAVLFASLFPPAWFAGVALLSTAKIIENMEIGHNVMHGQWDWMNDPEIHSTSWEWDNVGPAEHWKITHNFLHHKYTNVLGMDDDIGYGLLRVTRDQRWSPFYLGQPVYNLLLQMFFEYGVAIQHLELGKVAKKKWEPGSPERIQFEQDRTLVLKKIAKQAGKDYLLFPLLTGPAFFGTLTANLTANVIRNVWTNAVIFCGHFPDGAEKFTRRDVETETQAEWYLRQMLGSANISGGRLMHFMTGNLSHQIEHHLFPDLPSNRLASIAVRVRAMCDKYDLPYTTGSLPVQYAKAWRTIMKLSLPNKYLRHTTDDAPETKSEKAFGGAPAVDPATGRRRGLRTALAEGRRRITRRKEPALVG
>NZ_CP041695.1|WP_143979629.1|848078_849500_-|fatty-acid-desaturase
MAITDIKAFAHLTEADIETLGQELDAIRREVELSLGERDAKYIRRTIAAQRALEAAGRATLFFSKKRWAWITGTALLSVAKIIENMELGHNISHGQWDWMNDPEIHSTTWEWDMTGTSAQWKAAHNYSHHTYTNIVDMDHDVGFGILRMTRDEEWRPRNLAQPVGNLVLAALFEWGIALHDLSIVKEHLGTDPKQVLSEPNKEFFKKAGRQVAKDFVIFPALTGPAWKQTLKANATANLVRNLWAYAVIFCGHFPDGAEKFTQEQFENETQGEWYLRQMLGSANFEAGPVMAFMSGNLSFQIEHHLFPDIPSNRYHQVSMKVRELCDKYDLPYTTGSLGKQYLLAFRTIHKLALPDRFLKRTADDAPETSSERKFAGITLPSLPSMPSMPSDEWLVEHHWPVDPVTGKRQGLRSAMAEAKVALKEKARHEKEVLREARAALKEKARQEKEVLREKARNSERGRSLSRFLRRDY
>NZ_CP041695.1|WP_143979630.1|849605_850760_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MGLKVGGMRGLREWLEAPVAEHGPAGRTRMEALRGAAARITTPLLPDDYLHLVNPLWSARELRGRIVEVRKETADSATLVIKPGWGFDFKFEPGQYIGIGVLVNGRWHWRSYSLTCPPDWTDPGHRSKRLISIAVKAMPEGFLSSHLVSGVPVGSVVRLAAPQGGFVLPEPPPAKVLFLTAGSGITPVMAMLRTMDRRGVVPDVVHVHSARTPDDVMFGEELRELHERHPSFTADLHFTGEHGKLDLAELDRRVPDWRERDTWACGPAAMLDSAEKHWAAAGIGERLHVERFEIERSAVGEGGTVTFAKTGRSVEIDGATSLLQAGEGAGVRMPFGCRMGICQTCVVTITDGHVRDLRNGNEHRAGDKVQTCISAAAGDCTLDV
>NZ_CP041695.1|WP_143983842.1|850941_851598_-|hypothetical-protein
MLRELVTERELRAVNDTAFAVTPALREAYASGDDEELAEVAMGEAARASLRLLADDRAADELHGTGDDGDAAGGSGATDDAGDVADRTDDAGDSADTDGRDDADAVLDPATADAPAPADVSHRPVYRRAVVAADVEGATLRPDLDDAVVRLSGPITWNRVASVHLDLVEAEPAVAKAVDVIDAADMGDPDAEFVLGDAEDHQLAWYATQELPFLLDLL
>NZ_CP041695.1|WP_143979631.1|851656_853078_-|wax-ester/triacylglycerol-synthase-family-O-acyltransferase
MITRLTPQDASFYRLESSSNPMHIGSLAILRNPGSTGNSGRRPLDYDRLVELVEARLPLVPRYRRKVREIPFALGRPVWVDDARFDITYHIRRSALPEPGTDAQLHDLVARLASHPLDHTRPLWEMYLVEGLAGGRCAVFTKTHSALVDGDAALEIGHVILDSSAAPRELADDAWTPHREPADLELLIGAILHLATQPREAFDVLRHQGAEAFAFVDATGKAVKKMVSMVRAAAVGFADSPLNTRTSRNRRFEVARTDLEDYRKIRRRFDCSINDVVLSVVTGALRNWLLSRGEVLTESSALRAVVPMSVYSEGPDGQLKPAGRVTSLLVDLPVGEPNPVIRLSHLRHATEVHTKHQHGVRARTLVHMAGFAPASLHAMSVRAASTFAEHTFNLVITNAPGPQRPMYIGGARMLEMYPVSPLLRYQALSIGITSYDGRVFYGLNADRDAMADIAVLTASVHESMEEMLGACVQ

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Crispr_ID: NZ_CP041695_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041695_3

848139-848216

Orphan

Consensus_repeat	Method
CTCGCGCAGCACTTCCTTCTCCTG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP041695_3

>merge|NZ_CP041695|3|848139-848216|CRISPRCasFinder
CTCGCGCAGCACTTCCTTCTCCTGGCGCGCCTTCTCCTTCAGCGCCGCCCTGGCCTCGCGCAGCACTTCCTTCTCGTG

>NZ_CP041695|3|3|848139-848216|CRISPRCasFinder
CTCGCGCAGCACTTCCTTCTCCTG	GCGCGCCTTCTCCTTCAGCGCCGCCCTGGC
CTCGCGCAGCACTTCCTTCTCGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041695.1\|WP_143979637.1\|863315_864134_-\|metalloregulator-ArsR/SmtB-family-transcription-factor	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|176856
NZ_CP041695.1\|WP_029931579.1\|837501_838179_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP041695.1\|WP_143979627.1\|845947_846625_-\|5,6-dimethylbenzimidazole-synthase	unknown	unknown	gnl\|CDD\|380321
NZ_CP041695.1\|WP_143979626.1\|844642_845935_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|181597
NZ_CP041695.1\|WP_143983841.1\|833998_835453_+\|adenosylhomocysteinase	unknown	unknown	gnl\|CDD\|377487
NZ_CP041695.1\|WP_143979631.1\|851656_853078_-\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	unknown	unknown	gnl\|CDD\|274360
NZ_CP041695.1\|WP_143979633.1\|856549_857965_+\|nitrilase	unknown	unknown	gnl\|CDD\|234721
NZ_CP041695.1\|WP_143979622.1\|835568_836672_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176510
NZ_CP041695.1\|WP_143983842.1\|850941_851598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143979630.1\|849605_850760_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|99812
NZ_CP041695.1\|WP_143979624.1\|840790_842605_+\|MtrAB-system-accessory-protein-LpqB	unknown	unknown	gnl\|CDD\|237449
NZ_CP041695.1\|WP_085996472.1\|843875_844514_+\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|129824
NZ_CP041695.1\|WP_143979632.1\|853519_856354_+\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_CP041695.1\|WP_143979635.1\|859318_860248_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP041695.1\|WP_143979623.1\|836774_837422_+\|dTMP-kinase	unknown	unknown	gnl\|CDD\|236133
NZ_CP041695.1\|WP_143983843.1\|860381_862553_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226482
NZ_CP041695.1\|WP_143979628.1\|846729_847983_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|225779
NZ_CP041695.1\|WP_143979634.1\|858010_859219_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP041695.1\|WP_143979625.1\|842963_843608_+\|ComF-family-protein	unknown	unknown	gnl\|CDD\|223970
NZ_CP041695.1\|WP_143979636.1\|862722_863319_-\|riboflavin-biosynthesis-protein-RibD	unknown	unknown	gnl\|CDD\|334719

Protein	Function_ID	Function_description	E-value
NZ_CP041695.1\|WP_143979637.1\|863315_864134_-\|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl\|CDD\|176856	cd07814, SRPBCC_CalC_Aha1-like, Putative hydrophobic ligand-binding SRPBCC domain of Micromonospora echinospora CalC, human Aha1, and related proteins. This family includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of Micromonospora echinospora CalC, human Aha1, and related proteins. Proteins in this group belong to the SRPBCC domain superfamily of proteins, which bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. MeCalC confers resistance to the enediyne, calicheamicin gamma 1 (CLM), by a self sacrificing mechanism which results in inactivation of both CalC and the highly reactive diradical enediyne species. MeCalC can also inactivate two other enediynes, shishijimicin and namenamicin. A crucial Gly of the MeCalC CLM resistance mechanism is not conserved in this subgroup. This family also includes the C-terminal, Bet v1-like domain of Aha1, one of several co-chaperones, which regulate the dimeric chaperone Hsp90. Aha1 promotes dimerization of the N-terminal domains of Hsp90, and stimulates its low intrinsic ATPase activity, and may regulate the dwell time of Hsp90 with client proteins. Aha1 can act as either a positive or negative regulator of chaperone-dependent activation, depending on the client protein, but the mechanisms by which these opposing functions are achieved are unclear. Aha1 is upregulated in a number of tumor lines co-incident with the activation of several signaling kinases.	3.89323e-27
NZ_CP041695.1\|WP_029931579.1\|837501_838179_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.36125e-87
NZ_CP041695.1\|WP_143979627.1\|845947_846625_-\|5,6-dimethylbenzimidazole-synthase	gnl\|CDD\|380321	cd02145, BluB, 5,6-dimethylbenzimidazole synthase. BluB catalyzes the O2-dependent conversion of FMNH2 to 5,6-dimethylbenzimidazole (DMB), a component of vitamin B12; is is a subfamily of the nitroreductase family; nitroreductases typically reduce their substrates by using NAD(P)H as electron donor and often use FMN as a cofactor.	1.84927e-68
NZ_CP041695.1\|WP_143979626.1\|844642_845935_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|181597	PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed.	4.48735e-152
NZ_CP041695.1\|WP_143983841.1\|833998_835453_+\|adenosylhomocysteinase	gnl\|CDD\|377487	pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase.	0
NZ_CP041695.1\|WP_143979631.1\|851656_853078_-\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	gnl\|CDD\|274360	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase. [Unknown function, Enzymes of unknown specificity].	1.73448e-158
NZ_CP041695.1\|WP_143979633.1\|856549_857965_+\|nitrilase	gnl\|CDD\|234721	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed.	3.40547e-40
NZ_CP041695.1\|WP_143979622.1\|835568_836672_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176510	cd08567, GDPD_SpGDE_like, Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.	3.87521e-98
NZ_CP041695.1\|WP_143979630.1\|849605_850760_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|99812	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	8.27279e-116
NZ_CP041695.1\|WP_143979624.1\|840790_842605_+\|MtrAB-system-accessory-protein-LpqB	gnl\|CDD\|237449	PRK13616, PRK13616, MtrAB system accessory protein LpqB.	0
NZ_CP041695.1\|WP_085996472.1\|843875_844514_+\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|129824	TIGR00741, Probable_sigma54_modulation_protein_ORF3_ORF95., ribosomal subunit interface protein. This model includes a small protein encoded by one of two genes, both downstream of the gene rpoN for sigma 54, whose deletion leads to increased expression from sigma 54-dependent promoters. It also includes the N-terminal half of a light-repressed protein LtrA of Synechococcus PCC 7002 and the N-terminal region (after removal of the transit peptide) of a larger plastid-specific ribosomal protein of spinach. The member of this family from E. coli is now recognized as a protein at the interace between ribosomal large and small subunits, with about 1/3 as many copies per cell as the number of ribosomes. [Protein synthesis, Translation factors].	2.27141e-31
NZ_CP041695.1\|WP_143979632.1\|853519_856354_+\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP041695.1\|WP_143979635.1\|859318_860248_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.49909e-32
NZ_CP041695.1\|WP_143979623.1\|836774_837422_+\|dTMP-kinase	gnl\|CDD\|236133	PRK07933, PRK07933, dTMP kinase.	5.74981e-101
NZ_CP041695.1\|WP_143983843.1\|860381_862553_-\|AAA-family-ATPase	gnl\|CDD\|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	2.37841e-85
NZ_CP041695.1\|WP_143979628.1\|846729_847983_-\|fatty-acid-desaturase	gnl\|CDD\|225779	COG3239, DesA, Fatty acid desaturase [Lipid metabolism].	3.25771e-50
NZ_CP041695.1\|WP_143979634.1\|858010_859219_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	4.27696e-70
NZ_CP041695.1\|WP_143979625.1\|842963_843608_+\|ComF-family-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	3.2183e-25
NZ_CP041695.1\|WP_143979636.1\|862722_863319_-\|riboflavin-biosynthesis-protein-RibD	gnl\|CDD\|334719	pfam01872, RibD_C, RibD C-terminal domain. The function of this domain is not known, but it is thought to be involved in riboflavin biosynthesis. This domain is found in the C-terminus of RibD/RibG, in combination with pfam00383, as well as in isolation in some archaebacterial proteins. This family appears to be related to pfam00186.	2.96147e-12

>NZ_CP041695.1|WP_143979628.1|846729_847983_-|fatty-acid-desaturase
MAISDVKEYAHLTPEDVEAIGAELDAIRREIESSRGERDAKYIRNVIRLQRGLEISGRAVLFASLFPPAWFAGVALLSTAKIIENMEIGHNVMHGQWDWMNDPEIHSTSWEWDNVGPAEHWKITHNFLHHKYTNVLGMDDDIGYGLLRVTRDQRWSPFYLGQPVYNLLLQMFFEYGVAIQHLELGKVAKKKWEPGSPERIQFEQDRTLVLKKIAKQAGKDYLLFPLLTGPAFFGTLTANLTANVIRNVWTNAVIFCGHFPDGAEKFTRRDVETETQAEWYLRQMLGSANISGGRLMHFMTGNLSHQIEHHLFPDLPSNRLASIAVRVRAMCDKYDLPYTTGSLPVQYAKAWRTIMKLSLPNKYLRHTTDDAPETKSEKAFGGAPAVDPATGRRRGLRTALAEGRRRITRRKEPALVG
>NZ_CP041695.1|WP_143979627.1|845947_846625_-|5,6-dimethylbenzimidazole-synthase
MDVCAEGPLAPAEYPNVYDVIRLRRDVRAEFTGAVVDDATLLRILDAAHRAPSVGNSMPWDFVVVRDRDTLRTFADHVADKRRAFHASLPEDRARTFDPIKIEGIVESGTGIVVTHDQSRGGTHVLGRATVPETGLYSTILAIQNLWLAATAEGVGVGWVSFYDTPYLAELIGVPEGVKPVAWLCVGPVREFQEIPDLERFGWRNRRPLEAAVHWERFPSREQRA
>NZ_CP041695.1|WP_143979626.1|844642_845935_+|acetyl-CoA-C-acyltransferase
MATKGARRAVIVSGARTPFVRAFSDYTRMDSIDLADTAVRGLLARTGLPKAAVQAIVWGGVILPGAAPNIAREIALDLELDSGCEGYTVTRACASGLQAVTSAAAAIERGEYDIMIAGGSDSTSNAEVKLPQKVVHAAAPLALGKPKPKDYLAAVAQLAPFVDIVPRRPKIQERTTGEVMGESAEKMARIHGITRAAQDEFAVRSHHRAAAAIDSGRFDSEVLSVTTPEGKTVTRDGLVRPGTSVEKLATLAPVFAKDGTVTAGNASPLTDGASAVLLMSEDKAFELGFEPLAAFRSWSYVSVDPRDQVLIGPAISMPRALDKAGMSLSDVDLVDIHEAFAAQTLSVVSALASTDWAKTRLDRDTAVGAIDPATLNVHGGSVSLGHPFGATGARMVTTMANELARTGKSTALLGICAAGGIGASAVLERV
>NZ_CP041695.1|WP_085996472.1|843875_844514_+|ribosome-associated-translation-inhibitor-RaiA
MKADVVVKGRNVEVPDHFRIHVADKLSRLERFDPSIFLFDVELFHERNRRQRKSCQRVEITARGKGPVVRAEACADSFYAALELVVAKLESRLRKLKDRRRVHHGEKTPISVAEATAGLIDDSLFASSNGNGAAKAHDHAAEAVDEGQEYAGPGHIVRTKTHPAIPMSVDDALYQMELVGHDFFLFHDKESDQPSVVYRRHAFDYGLIRLAE
>NZ_CP041695.1|WP_143979625.1|842963_843608_+|ComF-family-protein
MGELLDLVLPRTCCGCGAGGFGWCAECAVTLAGPPVRARPRADPGVPCWALAPYAGPARRAVLAVKEQCRRELADPLGLAVARGLDRLRDHARPLVLVPAPSRRSAARRRGGDPVVRTALVAASWLPDCRMARLLRTRPGVRDSVGLSPGDREHNLRGRIITARPSRHAVPIPANAEVVLMDDVLTTGVTARESVRALTGAGVPVRAVFVTCRA
>NZ_CP041695.1|WP_143979624.1|840790_842605_+|MtrAB-system-accessory-protein-LpqB
MRLRRIGLLAVLVGSLSGMVGCAQLPDSSAPQALGTLDRQPTSTEPAPPIVGREPEALLQDFVQATADPANRHQAARQFLTPAAAVNWDDAEGTTIIEKPDTLRESRTEDTATYVIRTRKIGELEADGSYRVADGTLEDKVKLVKIDGEWRIDDLPTGVLIERSAFNKSYRRHALYFSNQAGTVMVPDLRWIAAPKEQLTQKLLGLLAEGPQPALTPAVKNVLSGPVSLRGPVTKANGEQEAVGVGAGGVLIDFSGAAGLDTRSKELLAAQVVLTLSEAEIFGPFMLLADGKPLDERYALNGWTRQDVEALSPSEAARNRIGLHAVRDGSLVRVTDNGIVPAPGFFGTTRTLQSVGLSPDGQLVAAVADSGRPEPEPGRTLIIGTYDGTGFPVATGGLITRPSWTSDGTSAWAVVDGERVIRAVHDRASGNVSVQDVDISALIAPVASATGALTPRLPITDLRISPSGVRAALIAGGKVYLAVVEPRPEGRYALTAPLPIAPELSTAAVSLDWYTQNTQMDSVMIAREGTVDPIVRVPIDGSGLNSVTSQNLTPPLRVVAAASDRQYVADARDVMELTSSAEGGERYWRVVPGLGANAIPVLPG
>NZ_CP041695.1|WP_029931579.1|837501_838179_+|response-regulator-transcription-factor
MKPKILVVDDDMALAEMLTIVLRGEGFDPHVVGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIVKPFKPKELVARVRARLRRTEEEPQELLSIADIVIDVPAHKVTRGGQQISLTPLEFDLLVALARKPRQVFTREVLLEQVWGYRHAADTRLVNVHVQRLRAKVEKDPENPEIVLTVRGVGYKAGPP
>NZ_CP041695.1|WP_143979623.1|836774_837422_+|dTMP-kinase
MGALVAVEGLDGAGKRTLTDAVVTALRARGLRVATLAFPRYGRSVHADLAAESLRGGHGDVAASVHAMALLFALDRADARDELSKLLVDNDIVLLDRYVASNLAYSAARREQDSRGEIARWIEDLEFGRFELPVPDLQVLLSVPTEVAEERARKRGEADTARALDAYEKDGGLQRRTAKVYSELAETQWRGPWWVHRSGDDPATLAARLAEIVAG
>NZ_CP041695.1|WP_143979622.1|835568_836672_-|glycerophosphodiester-phosphodiesterase
MTSLHARSTTTRTVAALGVAVAALALTACGSDDPDSTAPTTSAASAAADPNRPFDLQAHRGGRGLTIEESLPGFAKAIELGVSTLELDIVLTRDKVPLIWHDPEIEDEKCSDTAPATPDDPQYPYVGKLVHDLTYTQIQTLDCGKRLADFPTAQELPGNRIATLPELFDLVKTYPGAFEGLRYNIETKIEAEDRDESATPEEFVDVILAAVDAAGATDKVEIQSFDWRSLPLVKAKNPAVPTVALYDDSTFTAGSAWLGPIRYEDHRDDPLAAVKALGADIASPSYVNPWDSDAKLGDAGFTLVTDSAYVRRAHELGLRVVPWTVNDKATLAAVIDQGVDGVITDYPDRAREVMREKGMPLPASYTR
>NZ_CP041695.1|WP_143983841.1|833998_835453_+|adenosylhomocysteinase
MMTPDVRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYADVQPLRGARISGSLHMTVQTAVLIETLVDLGAQVRWASCNIFSTQDHAAAAVVVGPHGTVDEPKGTPVFAWKGETLEEYWWAAEQMLTWPDEPANMILDDGGDATMLVLRGAQFEKAGVVPPADENHSAEYTVFLNLLRERFETDKGKWTAIAESVKGVTEETTTGVLRLYQFAAAGELSFPAINVNDSVTKSKFDNKYGTRHSLIDGINRGTDVLIGGKKVLICGYGDVGKGCAESMAGQGARVQVTEIDPINALQALMDGFDVVTVEQAIGEADIVITSTGNKDIILLDHMKAMKDQAILGNIGHFDNEIDMAALERSGAARLNIKPQVDLWTFPDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKPEEYDNEVYRLPKVLDEKVAKIHVEALGGTLTKLTKDQAEYIGVDVEGPFKPEHYRY
>NZ_CP041695.1|WP_143979630.1|849605_850760_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MGLKVGGMRGLREWLEAPVAEHGPAGRTRMEALRGAAARITTPLLPDDYLHLVNPLWSARELRGRIVEVRKETADSATLVIKPGWGFDFKFEPGQYIGIGVLVNGRWHWRSYSLTCPPDWTDPGHRSKRLISIAVKAMPEGFLSSHLVSGVPVGSVVRLAAPQGGFVLPEPPPAKVLFLTAGSGITPVMAMLRTMDRRGVVPDVVHVHSARTPDDVMFGEELRELHERHPSFTADLHFTGEHGKLDLAELDRRVPDWRERDTWACGPAAMLDSAEKHWAAAGIGERLHVERFEIERSAVGEGGTVTFAKTGRSVEIDGATSLLQAGEGAGVRMPFGCRMGICQTCVVTITDGHVRDLRNGNEHRAGDKVQTCISAAAGDCTLDV
>NZ_CP041695.1|WP_143983842.1|850941_851598_-|hypothetical-protein
MLRELVTERELRAVNDTAFAVTPALREAYASGDDEELAEVAMGEAARASLRLLADDRAADELHGTGDDGDAAGGSGATDDAGDVADRTDDAGDSADTDGRDDADAVLDPATADAPAPADVSHRPVYRRAVVAADVEGATLRPDLDDAVVRLSGPITWNRVASVHLDLVEAEPAVAKAVDVIDAADMGDPDAEFVLGDAEDHQLAWYATQELPFLLDLL
>NZ_CP041695.1|WP_143979631.1|851656_853078_-|wax-ester/triacylglycerol-synthase-family-O-acyltransferase
MITRLTPQDASFYRLESSSNPMHIGSLAILRNPGSTGNSGRRPLDYDRLVELVEARLPLVPRYRRKVREIPFALGRPVWVDDARFDITYHIRRSALPEPGTDAQLHDLVARLASHPLDHTRPLWEMYLVEGLAGGRCAVFTKTHSALVDGDAALEIGHVILDSSAAPRELADDAWTPHREPADLELLIGAILHLATQPREAFDVLRHQGAEAFAFVDATGKAVKKMVSMVRAAAVGFADSPLNTRTSRNRRFEVARTDLEDYRKIRRRFDCSINDVVLSVVTGALRNWLLSRGEVLTESSALRAVVPMSVYSEGPDGQLKPAGRVTSLLVDLPVGEPNPVIRLSHLRHATEVHTKHQHGVRARTLVHMAGFAPASLHAMSVRAASTFAEHTFNLVITNAPGPQRPMYIGGARMLEMYPVSPLLRYQALSIGITSYDGRVFYGLNADRDAMADIAVLTASVHESMEEMLGACVQ
>NZ_CP041695.1|WP_143979632.1|853519_856354_+|preprotein-translocase-subunit-SecA
MPALTLSRLLRIGEGRTVKRLSHLADEVIALDEEFEALSDAELRAKTDEFKQRYADGETLDELLLEAFAVAREASWRVLNQKHYKVQIMGGAALHIGNIAEMKTGEGKTLTCVLPAYLNAISGEGVHVVTVNDYLARRDAEWMGRVHRFLGLEVGVILSGMTPAERRAAYAADITYGTNNEFGFDYLRDNMTHSLDDLVQRGHNFAVVDEVDSILIDEARTPLIISGPADASSKWYAEFARIAPLLKKDLHYEVDIKKRTIGVHEAGVEFVEDQLGIDNLYEAANSPLVSYLNNAIKAKELYTKDKDYIVRNGEVIIVDEFTGRILVGRRYNEGMHQAIEAKEGVEIQPENQTLATITLQNYFRLYDKLSGMTGTAETEAAELHQIYNLGVVPIPTNKPMVRKDQADLIYKTEESKYAAVADDIAEKHEAGQPVLVGTTSVERSEYLSKLLTKRGIPHNVLNAKFHEQEATIIAEAGRPGAVTVATNMAGRGTDIVLGGNPDIIADILLRKQGLDPVETPDEYEAAWHGTLERVKQQTEADAEAVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALESIMTRLNLPDDVPIEAKMVSRAIKSAQTQVEQQNFEIRKNVLKYDEVMNQQRTVIYAERARILEGEDMEGQVQEMITDVITEYVNAATAEGYVEDWDLDKLWTALKTLYPIGIDYRDLTGESEHGEVGDLDRDELLDAILDDAHTAYEKREAEIDGLAGEGSMRNLERQVLLSVLDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGFDMFTAMLDGLKEESVGFLFNLQVEVQAPQPAGMNVAPGLQSPVGSRPQPVEQPAPAANGAPAALRAKGIDDSAGSRAFSYSGPDEGGHAAVHSDAEEYGHAATTTGTRRERREAARAASKHDKAPKSKRRR
>NZ_CP041695.1|WP_143979633.1|856549_857965_+|nitrilase
MRQVAIAGVAALLSAVLWHVGSGLHPVPGVAFLAPLPVLLVAPSLSTPFAFLSGACAWLGGALWLWPYLTGTVEQPVPATVALLGGSALWFGALVALMSACLRRGRTWSAVIVVPAGWVALEFSLSLLGPFGAWWSIAYTQAEVLPVLQTAAVTGVWGLTFILLLAPSVLAVAANVDRPQRIRLTAMGGMLAVAVAGFGAWRLAAEPRGETVRAGLVAVSQPPAYVPVDSPAGQDMIARVIVEVESLADRGARVVVLPEKAWRADESTLSRLSGPLTEVAVRREIHIVAGLILTRAGRSVNAAIDFPSGAVYAKHHLVPGLEDDLAAGDDFRLVPGEPWALAVCFDLDRPALVRENRRLGATLLLVPALDFTDDHWRHSRMAVVRGVESGMGVARAAQLGELVVSDSRGRVLASARTDITTTASVLADVPLTAERTVYARFGDWFAWVGVGLFVLVLVDLSRRPRRRTEPT
>NZ_CP041695.1|WP_143979634.1|858010_859219_-|MFS-transporter
MEHVEEVAKTAVAQRRSARPRYWAGVAALAGGTFTVVTSEMLPVGLLTPMSEALRVSAGTAGLSLTVTGLVAAVSAPLLTAWGGRFDRRTMLAVLMAVVLLGNLGTAWAPGPVALIVARVLVGVGMGGVWAIAAGLAVRLVPPRSVGSATALVFSGVAVASVLGVPAGTFIGAIAGWRAAFAVVAGLALLVGAAMLTCLPKLPAEQSVSLRAALGRARIPRVRTGLVVIAFLVTGHFAAYTYIRPVLEIRAHAGAGLVSTLLLVYGITGVLGNFAAGALAARSPRRALMVIAATLAATVSLLPVLGAALPAAVLLVAVWGLAYGGVSVSAQLWLAAADPMARESVSALFVAVFNAAIAAGALLGGLVTDRLGVAAAMVVGGLFGFAALLAAATGHAPASPRP
>NZ_CP041695.1|WP_143979635.1|859318_860248_+|LysR-family-transcriptional-regulator
MGSLDVRELEAFLALADELHFGRAGARLYLSQSRVSQLLRSLEQRVGATLVERTSRRVRLTPLGVAFLAELRPAYTALHAALDTVRAAARGVSGTVRLGFQGATNEHLVSAIALFTTRYPDCAIELTEIPLSDPFGAVYRHEVDAAVVLLPVREPDIVLGQVFSPQAVSVAVPSGHPFTRRARVTVEDLAATALIGVRGPAPEYWRAVQAPATTPTGRPIPPGPAVGTLEEGLALVSAGRGALLLCDSTAEYHGRRPVRFVPVTGLPPSRLGLIWHRDRETARLQAFSQALAATAPADTAADRPAPPAP
>NZ_CP041695.1|WP_143983843.1|860381_862553_-|AAA-family-ATPase
MRSEQEYVAGLYARLDAERARVRGRYGAALRSHAGAAVDRDVEVRALAREAKRLDVADNGLCFGRMDALSGESTYVGRIGIYDEDDGFEPLLLDWRAPAARAFYVATAAHPENMRRRRRFHTRGRRVLDFTDDVFGRPGGDARGDAALLAAVNAPRGAGMRDIVATIQAEQDEIIRLDHPGVLVIEGGPGTGKTVVALHRVAYLLYTQRQQLERHGVLVVGPNPAFLNHIDRVLPSLGESSVVFMTPGDFVPGLHVTAEDAPEVARRKGALRMLDVLAAAVADRQRLPEEPMPIRLADVTVRIGRDIAEWARDEARASGLPHNEARAVFLDVLTWALTERALGRIGDGWLTRDDREAWEQMRGDLRAELARDERFGAAVDELWPTLTPQQLLAQLYTSPERLRAAGADPTLWRADGEAWTVSDVPLLDELVDLLGHDRSAEQAAAERERRAQTEYAAGVLDLMVGREDMMDDEDHLFAQDLLYAEDLAERFLERDTRELAERAAADRDWTYRHIVVDEAQELSELDWRVLMRRCPSRSFTVVGDLAQRRSAAGARSWGAMLEPYVPGRWAYRSLSVNYRTPAEIMTVAAAVLAEFAPDIRPPESVRACGVRPWSRRVTADELPTAIAEFTRAEADREGTSVVIGPPGTPGAVPASETKGLEFDAVLVVEPERILADGPRGAAELYVALTRATQRLAILHRGSLPRALDGLTATEAPVPTARPA
>NZ_CP041695.1|WP_143979636.1|862722_863319_-|riboflavin-biosynthesis-protein-RibD
MSTTRIVTANISLTLDGRYSGPGGPGDLSAIIPYAGTDVARDQMSRMCENATTAVLGRGNAEGFLGYWPSVAADENADPRDRGYAKWLVDADKVVLSSTLREAPWERTRVMNAPTADVITELKTEGTGEILVNTSPSVIKPLLAANLLDRLYLVICPEIAGGGQRLFDDGLPSSKWKLTFQETGESGVMAVIYDRVAE
>NZ_CP041695.1|WP_143979637.1|863315_864134_-|metalloregulator-ArsR/SmtB-family-transcription-factor
MDQIASALGDAARWRMVELLAERPRSVGELAQLTGLRQPQTTKHLQTLARAGLVTVFPLGQRRVYALDTPPLRGLAQRLLDLADTAAAHADDRAALAHYRTAIDTETRAAQRDRWADGRDFDFERTLDAPRDLVWRYWTDADLLGSWWAPPSLTVAECVLEPRPGGRTVLDYRDAEGRHYRSTGRVAAANAPEHLVFELSVLDDTGSISFTGHYDLTLTEVADGTRLRLHLSLTDTAVAAAPYIAGIETGWNQVLGTLADTIATRLAKEVQP

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Crispr_ID: NZ_CP041695_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041695_4

935750-935846

Orphan

Consensus_repeat	Method
GGCTCACCTGGGTTCGGTACGTCGCTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041695_4

>merge|NZ_CP041695|4|935750-935846|CRISPRCasFinder
GGCTCACCTGGGTTCGGTACGTCGCTGGTCAGGCTCCGGACGAACCGCTCGCCAGGCGCCAGTGCGGGTGGCTCACCTGGGTTCGGTACGTCGCTGG

>NZ_CP041695|4|4|935750-935846|CRISPRCasFinder
GGCTCACCTGGGTTCGGTACGTCGCTGG	TCAGGCTCCGGACGAACCGCTCGCCAGGCGCCAGTGCGGGT
GGCTCACCTGGGTTCGGTACGTCGCTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041695.1\|WP_143983848.1\|947817_951345_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223288
NZ_CP041695.1\|WP_143979679.1\|932188_933070_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP041695.1\|WP_051037614.1\|934363_934651_+\|WhiB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376791
NZ_CP041695.1\|WP_143979683.1\|936883_939361_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225461
NZ_CP041695.1\|WP_143979680.1\|933354_933837_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143979682.1\|936074_936650_-\|two-pore-domain-potassium-channel-family-protein	unknown	unknown	gnl\|CDD\|369572
NZ_CP041695.1\|WP_143979684.1\|939357_939660_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143979674.1\|921903_922584_-\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|225091
NZ_CP041695.1\|WP_143983850.1\|951396_952455_+\|potassium-channel-family-protein	unknown	unknown	gnl\|CDD\|367001
NZ_CP041695.1\|WP_143979676.1\|924342_928065_-\|nitrate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|227346
NZ_CP041695.1\|WP_051037623.1\|931386_932145_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|375319
NZ_CP041695.1\|WP_143979681.1\|934874_935615_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|380093
NZ_CP041695.1\|WP_143983849.1\|944956_947818_+\|DUF2800-domain-containing-protein	unknown	unknown	gnl\|CDD\|378929
NZ_CP041695.1\|WP_143979678.1\|929227_930982_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|238452
NZ_CP041695.1\|WP_143979685.1\|939781_941749_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|367616
NZ_CP041695.1\|WP_143979675.1\|922580_924341_-\|nitrate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|224063
NZ_CP041695.1\|WP_029931666.1\|942688_943006_-\|DNA-methyltransferase	unknown	unknown	gnl\|CDD\|226219
NZ_CP041695.1\|WP_143979686.1\|941888_942707_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|375319
NZ_CP041695.1\|WP_143979687.1\|943067_943853_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|274729
NZ_CP041695.1\|WP_143979677.1\|928585_928861_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP041695.1\|WP_143983848.1\|947817_951345_+\|AAA-family-ATPase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	4.04517e-99
NZ_CP041695.1\|WP_143979679.1\|932188_933070_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.06398e-24
NZ_CP041695.1\|WP_051037614.1\|934363_934651_+\|WhiB-family-transcriptional-regulator	gnl\|CDD\|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	1.33464e-26
NZ_CP041695.1\|WP_143979683.1\|936883_939361_-\|hypothetical-protein	gnl\|CDD\|225461	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription].	6.42018e-35
NZ_CP041695.1\|WP_143979682.1\|936074_936650_-\|two-pore-domain-potassium-channel-family-protein	gnl\|CDD\|369572	pfam07885, Ion_trans_2, Ion channel. This family includes the two membrane helix type ion channels found in bacteria.	1.11023e-10
NZ_CP041695.1\|WP_143979674.1\|921903_922584_-\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|225091	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion].	2.4975e-44
NZ_CP041695.1\|WP_143983850.1\|951396_952455_+\|potassium-channel-family-protein	gnl\|CDD\|367001	pfam02254, TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.	1.67228e-24
NZ_CP041695.1\|WP_143979676.1\|924342_928065_-\|nitrate-reductase-subunit-alpha	gnl\|CDD\|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0
NZ_CP041695.1\|WP_051037623.1\|931386_932145_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	3.28402e-18
NZ_CP041695.1\|WP_143979678.1\|929227_930982_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	6.7834e-67
NZ_CP041695.1\|WP_143983849.1\|944956_947818_+\|DUF2800-domain-containing-protein	gnl\|CDD\|378929	pfam12705, PDDEXK_1, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	1.79901e-42
NZ_CP041695.1\|WP_143979685.1\|939781_941749_+\|AAA-family-ATPase	gnl\|CDD\|367616	pfam03704, BTAD, Bacterial transcriptional activator domain. Found in the DNRI/REDD/AFSR family of regulators. This region of AFSR, along with the C terminal region, is capable of independently directing actinorhodin production. This family contains TPR repeats.	5.6351e-24
NZ_CP041695.1\|WP_143979675.1\|922580_924341_-\|nitrate-reductase-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
NZ_CP041695.1\|WP_029931666.1\|942688_943006_-\|DNA-methyltransferase	gnl\|CDD\|226219	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	1.65907e-25
NZ_CP041695.1\|WP_143979686.1\|941888_942707_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	3.20316e-11
NZ_CP041695.1\|WP_143979687.1\|943067_943853_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|274729	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	8.47316e-21
NZ_CP041695.1\|WP_143979681.1\|934874_935615_-\|VOC-family-protein	gnl\|CDD\|380093	pfam18029, Glyoxalase_6, Glyoxalase-like domain. This entry comprises a diverse set of domains related to the Glyoxalase domain. The exact specificity of these proteins is uncertain.	2.53746e-24

>NZ_CP041695.1|WP_143979681.1|934874_935615_-|VOC-family-protein
MSTRLACVVFDATEPRSAARFWAELLGWEITLDRPAEVDVAAPDPDGVEVALTFLAAPHPKAAKNRIHLDLASRSLDHQRVQVDRALSLGARRLDIGQGAVPWTVLADPEGNEFCVLEPREQYVDTGAVAAIVVDTRNPLRLAEFWSAAAGWPLTHDTARYAGIRSATGQGPWLEFLRTPAVCPDRGRLHLDLVAFPSDDPAAETARLRAAGATPISSGGDETDAPVAVLADPETNEFCLLRAPAD
>NZ_CP041695.1|WP_051037614.1|934363_934651_+|WhiB-family-transcriptional-regulator
MKLMFTKFDAAFEALADKAEFDDTGWRERGLCTQTDPEAFYPEKGGSTREAKRVCAGCEVRVQCLEYAMARDERFGIWGGLSERERRRLKKGEAA
>NZ_CP041695.1|WP_143979680.1|933354_933837_+|hypothetical-protein
MSRMIRLVPHIAVAAAGDPRSGTFAVCDGEGTALWYGPYSDYEHAHPRGPRVAAGMAAASRAVWLAGRACAETGLRQADVRLTVSDREVDAAVLFGMATMAGMTLRLFSTSDNPARDWCRVPGRRDWQPGTLAALVEYRATAAGTASGIPVRQAETPCLP
>NZ_CP041695.1|WP_143979679.1|932188_933070_-|alpha/beta-fold-hydrolase
MPYVHSGSATVHFRTSEVSGPTLVGAHGFFLDGSAFEPLCKPLAAAGINLVTIDARGHGRTRTPDGEIFSYWDLAADILAVLDELDIDGAVIGGMGQGGFSALRLALAAPHRIRGLALMDTEAGECTPAELAWYRVFFERWCGSEPLAPLIAELAPQLIGGQDPRAWREWTVRWSESDRTIVGAAARCLMDRRSLLHRLPEITAPALVLRGSHDGVSTAQKSEALAAGLPGADGVVTIPGAGHGAVWTHPESIAPLLIQLVRRAEGDIDSVRTPRTAPGRGARVAVPPAAIAM
>NZ_CP041695.1|WP_051037623.1|931386_932145_+|helix-turn-helix-transcriptional-regulator
MLRRLRDDRGVSRERLAFNAGVSASYISHLEKGDRDHPTREVVDALVRYLDRIDALSQVERRHLLDLAGLGAGEFPSVDRLRDEVGPDMRRALELHEPHLAAYIDTRWNVLACNDSYNRAFPGLAEDVNMLRWFFANPRSRQVMVEWEAEVRTTVRWLRGLIGSTGDTAWSTEFLAELGRYDLFRELWDEGVAAYGRDRPIMHVRDAETGRCRSIAVQLFKVYSASNPDQIQIFLGLPTWCSERTHPVDVRS
>NZ_CP041695.1|WP_143979678.1|929227_930982_-|NTP-transferase-domain-containing-protein
MTTVDAIVLAGGRATRMGGVDKPAIVVGGQSMLDAALGAVADCARTVVVGPQRPELPPEILQAQEIPAGAGPVAAIAAGLGVLAGCDFPAGLIVVLAADMPFLTAPAIDELLRHALESGSDAVFAADESGRPQYLVGVWRRAALTAAVSRLESLVNQPMKALVPVDTVMVPLAGVADCDTPDQVRHAREAVEQTTANTPMTLDEARSVLRHTVSQLTPRSAAIRAARGAALAEPLLAADALPRFDVSAMDGYAVSGDGPWQVRRDIGFAGGQRPVGLLTGEAVRIATGAHVPDGTTTVVRDEFVRVDESGVLHRLPDAPVRDDVRRRGEDWLPGTEIAPAGTPVHAALVSAAASAEVRTALVRGPVRARIVMTGDEIRSEGPLHAGQTRDSIGPILPDLLAWHGVQTQDRVHLRDAANAFDEVLAAASDCDLLVIVGATGGGAADQLRAALGRARAGVLVRRLRLRPGGSTVVAQLRSGAVVLGLPGNPFAAVATLLALSPALVSGLTGATHERVLLGPLANAGEISGPVARIVPARAVPTGGWVGDASIRTAHLAGLLYRDGLVVVPAEARDGDPVEFIPLPG
>NZ_CP041695.1|WP_143979677.1|928585_928861_-|hypothetical-protein
MLVGDEHYGTVDGDGASTAPTDLPFLAGRVYDTEDRLMQRAYTFACPVPGCPHLHEDRTDSPPEVWQARVKSALARHLAAAHPDWRPSADD
>NZ_CP041695.1|WP_143979676.1|924342_928065_-|nitrate-reductase-subunit-alpha
MANPGTDSSSADALLRLGKYFNRGEVSADLRTVHKVGGRDADEFYRDRWAHDKVVRSTHGVNCTGSCSWKIYVSDGVITWESQQTDYPSVGADKPEYEPRGCPRGASFSWYTYSPARVRYPYVRGVLLELYRAAKAELKDPVLAWESIVEDPEQAKRYKHARGKGGFVRAEWWEAAEIAAAAHVYTIKKYGPDRVAGFSPIPAMSMVSHAVGARFISLIGGSMLSFYDWYADLPVASPQVFGDQTDVPESADWFDAGYLIMWGSNVPVTRTPDAHYMTEARYRGQKVVVVSPDYADNTKFADEWVPARPGTDAALAMSMGHVVLKEFFVERDTPYFRDYVKRYTDLPYLITLDDKDGVCVPGKFLTAADLGHTGEGVEFQTVLLDADGNPAVPNGSLGHRFTEAGKGKWNLDLGDVDPLLTLHGRVSDAAAVQLPRFDDGTAGVITRGVPTAVVAGKRVTTVFDLLLAQYGVARTGLPGSWPTGYDDASEPYTPAWQETITGVPAKQAERIGREFADNAEKSQGRSMILMGAGTNHWFHSDQIYRAFFTLTLLTGCQGVNGGGWAHYVGQEKCRPVTGWSTLAFGLDWQRPPRQMQGTVFWYLANDQWRYDPFTAESFSSPLGAGRFAGRTAADNIALATRLGWMPSYPTLNRNPLDLVDEAEAAGKTPADHVVDGLTSGELRFACEDPDAPENFPRVLTVWRANLLGSSGKGNEYFHKHLLGADSNLQTTDTTGVRPQELVWREQAATGKLDLLMSLDFRMTSTTLFSDIVFPAATWYEKHDLSSTDMHPFVHAFSPAISPPWEAKTDFDAFHRIARGFSWLAEKHLGKRKDLVAVPLQHDSADALAQAGGRVLDWKAGECEPVPGRTMPKLVVVERDYPSVAEKMAALGPLVETAGLTVKGVTTLPDAEVEYLKGVNGTVVSGVAQGRPSLAKDTHAAEAILALSGTTNGRLAVEGFHALEQRTGTRLADLAAEHEGKRISFADTQARPVPVITSPEWSGSETGGRRYSPFTINTERLKPWHTLTGRQHFYLDHDWMIELGEQLPIFRPPLDMTALFSEPGVGNVSENGVTVRYLTPHSKWSIHSAYQDNLHMLTLSRGGQSIWMSDKDAAKIGVADNDWIEAVNRNGVVVARAIVSHRMPEGTVFMYHAQDRAVDVPRIEGTPNGNGANGSGADGSGFVGKGKRGGIHNALTRIMIKPSHLIGGYAQQSFALNYHGPTGNQRDEVTTIRKRSQEVEY
>NZ_CP041695.1|WP_143979675.1|922580_924341_-|nitrate-reductase-subunit-beta
MRVMAQLAMVMNLDKCIGCHTCSVTCKQAWTNRGGTEYVWFNNVETRPGQGYPRQYQDQEKWKGGWTLNRKGRLTLKSGSRMKRLLNIFANPDLPTVSDYYDPWSYDYDNLLSSPQIDTTPVARPKSLITGEDTKVTWGANWDDDLGSGPEQVGRDPLLSKLSDQVKLEFEQTFMFYLPRICEHCLNPSCAASCPSGAIYKRAEDGIVLVDQDKCRGWRQCVTGCPYKKIYFNHKTGKAEKCTFCYPRVEVGIPTVCSETCVGRLRYIGVMLYDADAVQEAASVENDKDLYPAQLGVFLNPHDPRVVAEAERAGISTEWIQAAQDSPVYKLIVDYQIALPLHPEYRTMPMVWYVPPLSPVVDVLSETGHDGEDHSNLFGAIDALRIPVEYLAELFTAGEVGPVRAALQRLAGMRSFMRSINLGQEPDLSIPEAVRLEPEEIEAMYRLLAIAKYEHRYVIPSGATSRAHELDSLATGCSLDTDGGPGMTAYDYMADKFHLSDTNGAAPEEKSNRINLLNWDGKKTDGLVPTRDGAAADGNGVSNGGVGSNGSGVSNGDGHNGTEPHGDGAHAATDADPTPEPSGVRR
>NZ_CP041695.1|WP_143979674.1|921903_922584_-|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MKLLTLRRRPEPTVRMSERDRRLVWRTAALCLDYPSEDMLRTVHEFGGAVDELPAEVRAQLGEFLAHLRETDPLALAQRYVETFDMRRRASLHLTFYAYGDTRKRGMALLRFKHAYRHAGVELGDEELPDHLPVLLEFAATVDPIGGERLLGEHVPVLELLRLSLSDNGSPYAAVLAAVTATLPPVTTADRRRIAELAAQGPPEEEVGLEPFAMDPMMFAGSEGRR
>NZ_CP041695.1|WP_143979682.1|936074_936650_-|two-pore-domain-potassium-channel-family-protein
MPNEEVPHTVPAGARPGVVRRALLPPLLTAAVLLLAYFVLPFTGVLAGRALVVLVLGGLLVCVTLGWELRRVLRAENPLARGLEGLAAVFGLHIVGFATVYLMLSEVDPANFSETLTRLDALYFCVTVFTTVGFGDIVADSQPARAAVLVQMVVNLVLIGAALRLFTHAVGLRQRQLDRREPGVDPPATGP
>NZ_CP041695.1|WP_143979683.1|936883_939361_-|hypothetical-protein
MTDRSTDGRITADLSYPAIDRPDLYDRLDAATAAGGRVVLLSAAAGTGKSVTVADWLRRRPAPGTTVTWVDLADSDTDPGVALRGRTGPTLLVVDNAQRITDPAALEPRLRCLPSTVTVVLCARTDPALRWHALELCGRVTRIGAAELALTAAQTRALCAQHGYHPDDDELAALRELTGGWAAPTRILAARLALAHPGGRSVAALRTHLPRALSDFLTREVIEPLPADLRRFLLCTGAPTAFTTELAATLAGPSAPLLLRELERRNIPIARIARDDGVWFEHHPLLHAQLRADLPRLGAEFAAGLESRAARWFDAAGLPLLALPHLLDAGASDRLADHLRRHGMTMVLDGDGPALFAHLNRGRPELSGDPYLALLRAVDALGRGDATLTESLPSPGHRGATSVAPAAWLTPLARAADIDTALRTDRPVGRPVAAPTTGHLDLDCYLTVHLASARALHGDRADGEARLRHGLTLATRANRPGLALRAVTGLAVAAGRADALTAMRDRAAKAIAVAAEHDLDRTVDALHAAGMAAFGAYLQGESWPADQTEALLTTREDADGTPRPAAGWSTHVIGRLLDFHRCPEQRTAAEDLRSAMLALLDRGGPLPVSGSRLLLPVVWALSTVRAPRTARLLVAHARTTGVGIPEVPLAQAALALVAGGATAVRPMLAAAHERAAELATTERTTLWLLDAATAALSDAPHPAGDRLRRAVELAAPEQVVRPFLDVPGVIEMLDDRAGTFGRGDDFVDRIRRHPGIGRTAAAPPLTAAEITVLTQLPSGRTAQQIAADLGVSINTVKTHLHRLYAKLGVNSRMDAIGRGRRIGLL
>NZ_CP041695.1|WP_143979684.1|939357_939660_-|hypothetical-protein
MRENGFAATLLGYLSDLTETIARRIDRIVIARTLSLDEAGAPDGLYRDRFGALWEKHARGWRLWLRSGAALEVLATEADIARTLRSFAPFTPVVVWLPRR
>NZ_CP041695.1|WP_143979685.1|939781_941749_+|AAA-family-ATPase
MGQYDLALRQIVNIQQTAEVRPRMRENTWRAGKVMNDRRIRVLGPLRVVIDGTPVDIRGRLPRTLLGRLVVAHGRVLSVDRLVDDIWEGTPPSSAASVLQVQIHKLRTVFEPRRHRRAPATVLVSEGGGYALRLAVEQVDAWHFEALLRVYQDRLRESGTGIDPADRCRLLDAALACWDGAALESFQDAGWAVGEADRLTDLRLLAAELRAQAALALDRPTEVVTGLRPLLDQRPGREEGARLLAIAQYRLGQQAEALATLRRAGEYLVREIGVYPGRRLRDLESAILNQTDPLQVGPTVHAIAETPAAGRDSALDPGPSGGAHTGYPRQFAAVLAAAAEAWARGARPIWLAGAAGMGKTYLAESVAAELRRRSWTVATGRCVDGGPPARAWADIAASLDGPAGFAESLSAARYFDVARTIAQRCRTVAAARPVALVLEDLQYADPVTLHILRLLTAWLRRAPVLLILTLRPAEAGPELRATVTALADRTVSWEELNGVGPDTVARMVRTAGGTAVDRDTIAALRERTGGNPLFVRELAGIAAQHGDIRELPPRVRDIVRARIERLPAEVIRTLRYTARLGDDADVAGLLALLGCSETALLDRITTAQAAGIIRFDPVGRIGFEHSLIREVLEYGFPEEWPTGERASPRQRESGR
>NZ_CP041695.1|WP_143979686.1|941888_942707_+|helix-turn-helix-domain-containing-protein
MAANSGCVDKAGEVQPPTLGNLLRRLRDSRRVSRERLAFNAGVSASYITHLENGNRERPTQEVLQALVRCLHQIGPLSAVEYRYLLDLAGFDVRERVAPDELRGELGGGLGDDPRRALMLHEPNLAAYLDIGWNVLACNDSFARAFPGITDDGNMLRWLLGDKSSRRVLVEWEQETRLLVRWLRGLIAGAGTGVAASELLADLGRYEFFRRIWDEGIPAYGRDRPLLHLRDPETAVRRTVAVQMFRADFPNRSDSVQVFLGIATDRDQSPGD
>NZ_CP041695.1|WP_029931666.1|942688_943006_-|DNA-methyltransferase
MATTDAEIERVRALVALIPPGRVATYGDIAAAAGLSTPRTVGWIMRTDSADLPWHRVLRADGRPAPHLAGRQLQRLAAEGCPLLDDRVDLRRARFDLAADQSPGD
>NZ_CP041695.1|WP_143979687.1|943067_943853_-|alpha/beta-fold-hydrolase
MADLQVHRFGPSTGPLVLALHGLTGHGNRWRALAEEQLPEVRMVAPDLRGHGRSTSLPPWDFETVVADLVTVLTAETGKPAVVVGHSFGGAVAIHLARARPDLVRALVLLDPAIGIDPVLLHDIARSTLEHPDYESVEAARFDKLETGWAEVEPRLLDAELAEHLMPTGGGRVGWRLFAPAVLSYWGQLARDVVLPPAGMPTVLVQAAKVRPPFVPPAFRAALTDQLGDRLTVHDFDCDHMVSEARPAETAALVRAVLATT
>NZ_CP041695.1|WP_143983849.1|944956_947818_+|DUF2800-domain-containing-protein
MLRDNHRSAPAIQEALARITARLPGTGVHRTPPVTLRVVDAPATEPDAARDSAQATISASTATDRVAAPGTDRAAGPRTGWVAGPGWVGSARDVGARDDRAAASDAAASAYPDTARTADTGVGHRAGVGARESGRGGDIPALEGEVRVHVLTTPAKEAALVADHLRRAHLTHGVPWSRMAVIVRSIPLSLAPLRRALLAAGVPVRQPPPEVPLARRRGAAWALLTLRAIMASDPSRHPGPRPDAFTADDALDLLAGPLGGADQISLRRLRRGIRRSVLELGHPTRRPEPDADAHASAPDDSATVDGSEPRPGTDRAEPSGAAPGDDAGADSRTPGTGAAVSGGREDVRVGQATGPDGEREAERFADLDRSSAEILRDLIIGVGDRAVLGRLTEVESAPLRRVLKAVGRGRAARRRGEGLEETLWAVWTASNLERRWVGQSERGGAVGMQADRDLDAVVGLFEAAGAYVDRLPHATVEGFVEYLEQQEIPQDSAPHTDPGEAVTIVSAHGAAGREWDTVAVAGVQEGIWPNLRPRGTLLGVEELVDVIAGVGNTGERLSRAAPLLAEERRLLLVACGRARRSLLVTAVESVTGDQDLTPSRFLAELDADTDHGAPGRIPAPVDPGRALAMHALIAELRGAVCDPEADPDRADRAARQLARLAAAGVRGAHPDEWYGTADLSSEHPLWEIEDGAVGLSPSTVDQLKTCPLRWALERHGGQDGDNVHALKGNLVHTLVQALAGQVDEAQVKAALAKAWKKVDPSSREGENWHSRQELRRTETMVDTFLAWLRNTRDELTALGVEVPIDLTLPARGPDELPVRIKGRVDRVERDALGRFVIVDVKTGKTPISKQAAEDHAQLATYQVAAAEGALGDGEPGGARLVYVAKPSSREGATQRAQPPLDEAGIDRWRGVIHDAAAATRGPSYLAMRNDGCRHCKVSGSCPVQDTGRQVTDE
>NZ_CP041695.1|WP_143983848.1|947817_951345_+|AAA-family-ATPase
MTPRQLADALGLPPPTDEQAAVIAAPPGPTLVVAGAGAGKTETMAARVVWMVANGLVEPEQVLGLTFTRKAAQQLTTRIRTRLARLAGAPLVRDIDPTGHLRALLTGSEPEISTYHSYAGRLLTEHGLLLPVEPNATLLSETQLWQLAYRLVSTWDGDLDIDRTPVSVTEAVLALSGQLAEHLVRPDQLRDAHRELDRLIHTLPAGPKQRGGPKKALLDLLAVQEERISLLPLVERLAEELRRRGALDFGAQMSLAARLAAEHPEVSAAEGERFRLVLLDEYQDTGHSQRILLASLFGGIGSDHDDDPAGSGRLAVTAVGDPMQSIYGWRGASAANLPRFATDFPCAPGIPAPVLPLLTSWRNPPEALELANLVADPLRRRAAEGGGVTVDALRPRPDATDGVLAFALTETVADEREWVAERIAAEWEAAADLGAQPPISAVLVRRNADAAPLAEALRERGLPVEIVGLGGLLHTPEVADVVATLRLIADPSAGSAAIRILTGARWRIGVADIAALFRRARELSIRQPGGQQAAITDTGTLDDALREVAPEPSEQAGLADAIADPGAAEQYSPQGFARINALGAELTALRERSGQPLPELVADVERTIGVGVETQARRAAAGAGAGREHLDAFAEVVSGYAADHRASLTGLLAFLAAAEEVENGLEPGEVEVARDRVQVLTVHAAKGLEWEVVAVPHVVDGTFPSGTGTTTWMGALAELPTALRGDRQRDDAGEGVPVLDLTDIHDRADLERALDAHKKALAARRLDEERRLFYVALTRTERALFVSAHHWAETGSKPKGPSDFLLDLARAAEQPGTLARAVRIDRWDDPPPPDTPNPFTDNPPTATWPRDPLGKRRPDIEHAAALVRAALADLRAEPSAGGRGGDGPPHRRADPLADLSVDVETVAGESDSDDPDPEGWAADVDALLAEHAAATQAAREVELPGQLPATALVDLHADPAKLAARLRRPLPYPPSPYARRGTAFHAWLQRWFGASRLLGVDELPGASDIGDTDADLVRLQEAFLASPWADRNPVEVEVSFETTLAGTVLRGRMDAVFREPDGRWVVVDWKTGAEPKPAEEAAVAVQLAVYRVAWARLLAQRTGATEAEMLDRIGAAFHYVRTGRTIAPEHLPGPGELAGLIGAAAPLGPEPDTPEDTDRSPDAPRPDITSRRSDR
>NZ_CP041695.1|WP_143983850.1|951396_952455_+|potassium-channel-family-protein
MFGDSSPGLGRLTERPDFALVGVLRIPEAQTSPWRLLWRRIGMAVLLLALATTVVYIGRDGYNDNTDGELSLMDALYYSTVSLSTTGYGDIAPVTDKARLVNILVITPLRVLFLIVLVGTTLSVLTERSRQAFKIQRWRHTVRNHTVVVGYGTKGRTAVDAMLGDGVQPAEIVVVDTDADMLERAANAGLVTVHGSATQSDVLRLAGVQNAASIVIAANRDDTAVLVTLTARELNAKAKIVASIREAENTHLLRQSGADSVVVSSETAGRLLGIATTTPSVVDMIEDLLTPEAGFAIAERDVEPEEVGGSPRHLRDIVLGVVREGQLIRVGEPEVDALETADKLLYLRRANL

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Crispr_ID: NZ_CP041695_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041695_5

2428119-2428219

Orphan

Consensus_repeat	Method
TTCGACGACCGGGTGCTCGCCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041695_5

>merge|NZ_CP041695|5|2428119-2428219|CRISPRCasFinder
TTCGACGACCGGGTGCTCGCCGCCGGGACCGGCTCGGCCGCGCGGGGCGTCGCCGAACTCGCCAGGAGACTGGCCGGTTTCGACGACCGGGCGCTCGCCGC

>NZ_CP041695|5|5|2428119-2428219|CRISPRCasFinder
TTCGACGACCGGGTGCTCGCCGC	CGGGACCGGCTCGGCCGCGCGGGGCGTCGCCGAACTCGCCAGGAGACTGGCCGGT
TTCGACGACCGGGCGCTCGCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041695.1\|WP_143983993.1\|2422502_2422718_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143983994.1\|2423018_2423357_+\|NADH-quinone-oxidoreductase-subunit-A	unknown	unknown	gnl\|CDD\|376344
NZ_CP041695.1\|WP_039818716.1\|2419417_2420263_-\|3-hydroxybutyryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|181133
NZ_CP041695.1\|WP_143983997.1\|2434073_2435045_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|182464
NZ_CP041695.1\|WP_143980565.1\|2425640_2426204_+\|NADH-quinone-oxidoreductase-subunit-J	unknown	unknown	gnl\|CDD\|376343
NZ_CP041695.1\|WP_143980574.1\|2438608_2439769_+\|lactate-2-monooxygenase	unknown	unknown	gnl\|CDD\|239448
NZ_CP041695.1\|WP_143980561.1\|2415049_2417041_-\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP041695.1\|WP_143980569.1\|2431592_2432213_-\|(2Fe-2S)-ferredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239278
NZ_CP041695.1\|WP_143980563.1\|2423776_2424706_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143980572.1\|2436564_2437455_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379312
NZ_CP041695.1\|WP_143980568.1\|2428485_2429979_+\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235622
NZ_CP041695.1\|WP_143980562.1\|2421462_2422365_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|378820
NZ_CP041695.1\|WP_143980571.1\|2435068_2436103_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238568
NZ_CP041695.1\|WP_143983995.1\|2430037_2431435_+\|NADH-quinone-oxidoreductase-subunit-N	unknown	unknown	gnl\|CDD\|235603
NZ_CP041695.1\|WP_143983992.1\|2417293_2419342_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224926
NZ_CP041695.1\|WP_143980564.1\|2424698_2425622_+\|NADH-quinone-oxidoreductase-subunit-H	unknown	unknown	gnl\|CDD\|376297
NZ_CP041695.1\|WP_143980566.1\|2426200_2426503_+\|NADH-quinone-oxidoreductase-subunit-NuoK	unknown	unknown	gnl\|CDD\|180218
NZ_CP041695.1\|WP_143980573.1\|2437463_2438498_-\|AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP041695.1\|WP_143983996.1\|2433009_2434056_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|227119
NZ_CP041695.1\|WP_143980570.1\|2432209_2433013_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224045

Protein	Function_ID	Function_description	E-value
NZ_CP041695.1\|WP_143983994.1\|2423018_2423357_+\|NADH-quinone-oxidoreductase-subunit-A	gnl\|CDD\|376344	pfam00507, Oxidored_q4, NADH-ubiquinone/plastoquinone oxidoreductase, chain 3.	2.9632e-27
NZ_CP041695.1\|WP_143983997.1\|2434073_2435045_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|182464	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease.	3.15562e-80
NZ_CP041695.1\|WP_143980565.1\|2425640_2426204_+\|NADH-quinone-oxidoreductase-subunit-J	gnl\|CDD\|376343	pfam00499, Oxidored_q3, NADH-ubiquinone/plastoquinone oxidoreductase chain 6.	7.08722e-10
NZ_CP041695.1\|WP_143980574.1\|2438608_2439769_+\|lactate-2-monooxygenase	gnl\|CDD\|239448	cd03332, LMO_FMN, L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.	0
NZ_CP041695.1\|WP_143980561.1\|2415049_2417041_-\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP041695.1\|WP_143980569.1\|2431592_2432213_-\|(2Fe-2S)-ferredoxin-domain-containing-protein	gnl\|CDD\|239278	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE). TRX-like Fds are soluble low-potential electron carriers containing a single [2Fe-2S] cluster. The exact role of TRX-like Fd is still unclear. It has been suggested that it may be involved in nitrogen fixation. Its homologous domains in large redox enzymes (such as Nuo and hydrogenases) function as electron carriers.	2.44259e-09
NZ_CP041695.1\|WP_039818716.1\|2419417_2420263_-\|3-hydroxybutyryl-CoA-dehydrogenase	gnl\|CDD\|181133	PRK07819, PRK07819, 3-hydroxybutyryl-CoA dehydrogenase; Validated.	6.55496e-163
NZ_CP041695.1\|WP_143980568.1\|2428485_2429979_+\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235622	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed.	4.97467e-155
NZ_CP041695.1\|WP_143980562.1\|2421462_2422365_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	1.39338e-08
NZ_CP041695.1\|WP_143980571.1\|2435068_2436103_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238568	cd01148, TroA_a, Metal binding protein TroA_a. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.	5.63611e-53
NZ_CP041695.1\|WP_143980564.1\|2424698_2425622_+\|NADH-quinone-oxidoreductase-subunit-H	gnl\|CDD\|376297	pfam00146, NADHdh, NADH dehydrogenase.	8.2616e-40
NZ_CP041695.1\|WP_143983996.1\|2433009_2434056_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|227119	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism].	2.52543e-71
NZ_CP041695.1\|WP_143983992.1\|2417293_2419342_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224926	COG2015, COG2015, Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP041695.1\|WP_143983995.1\|2430037_2431435_+\|NADH-quinone-oxidoreductase-subunit-N	gnl\|CDD\|235603	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN.	1.05836e-90
NZ_CP041695.1\|WP_143980566.1\|2426200_2426503_+\|NADH-quinone-oxidoreductase-subunit-NuoK	gnl\|CDD\|180218	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK.	4.79781e-17
NZ_CP041695.1\|WP_143980573.1\|2437463_2438498_-\|AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.01983e-13
NZ_CP041695.1\|WP_143980572.1\|2436564_2437455_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.5524e-12
NZ_CP041695.1\|WP_143980570.1\|2432209_2433013_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	4.13562e-120

>NZ_CP041695.1|WP_143980566.1|2426200_2426503_+|NADH-quinone-oxidoreductase-subunit-NuoK
MNLPEFLVLAAALFSVGLYGVLSQQSIVMIMMGLELMINAVLVAAAAFWYFAWPTADAQVLVVVAVTAMAVEMAAGFAVATIVFRARDIDTVDDATDLKG
>NZ_CP041695.1|WP_143980565.1|2425640_2426204_+|NADH-quinone-oxidoreductase-subunit-J
MLSHILFWVCAVGAVAAGVAVFRVDSMARATFALLLSFLFAAGTVFLVELAYLGVLVVLMMIMEMVIMVLFMVMYMMNPAGLMPMSMVHNKIGALVISGTVFVALSAVALLVDWPRREDAPPADPTRALGEALMGSKMLVMIIVGLVLFTTMVATVVLATHRGRYDRYGDRLDRRIPDDPVEGGVRS
>NZ_CP041695.1|WP_143980564.1|2424698_2425622_+|NADH-quinone-oxidoreductase-subunit-H
MVELAPWWLTVLLPAGVLAMAWGTATADAVLRARAAGAPVAAAVGAPWRAVVLGLVQQRRRIVGADVLLWRAAGLVLLLAGVLAAALVPVGGAVVLDGGVSLVWFNAVEVVAWVAVWSAGWGSNSVFALVGGYRFVAQGVAYELPHMFALTCAAVGAGSLRIADVVAAQQDRWFVLIMPVAFAVYLLSVPAMAFTRPFDAPAGTDLAGGVFAEVSGPDRLLLRVARRVLFVAAAAMAVPLFLGGGAGPWLPGWLWTLVKTIAVLAVLVWLGRRWPTIRMSRYMEVAWLVLLPLTLVQALVVSLLVLR
>NZ_CP041695.1|WP_143980563.1|2423776_2424706_+|hypothetical-protein
MEHGGTGAHGEPDADDERRERSARDENGGHGHGGHAEHGGHGGHGGHGGHGHEGVEMPGGLAMAERAADRDGLTLDEVTVSLGPVLPWWPAGLVVTARVQGGIVSSAEVSTLAAPEGAGSFWLEPWVGRVEAGDGGWMRRRYAVARRVDSVATLLTVAGWEDAAAAGRLLRDRVLADGPADAGESLGHRWIRRVRRSRTLRWSLRGVGTIADGPGAPPGLAGDTADRLDAWLTEIGQLLSNRASVEWNAAIARRTADFPATETTRTTWTLAALPELLAGVTLAEARLIVAGLDPDPDVLCHAPREVVHG
>NZ_CP041695.1|WP_143983994.1|2423018_2423357_+|NADH-quinone-oxidoreductase-subunit-A
MPHLLVLVGIVLASTAVLYAAARAVRPTPQAEQMPFLSGAAPREHAVSRYHVRWYAVTMLFLAFDMEMAYMYPWAVVVADLGSSAVIEMFGFLAVLMVAVLYAWREGALRWT
>NZ_CP041695.1|WP_143983993.1|2422502_2422718_-|hypothetical-protein
MDPAPERTPDLEPGGGVAPGSTPPDTPQTSGLSAPEPRTRHHFPPTGVLAITAILLIVAVFIVVAIAIAVS
>NZ_CP041695.1|WP_143980562.1|2421462_2422365_+|alpha/beta-fold-hydrolase
MTVTTVPFTFTRDGDRLVGTLYLPEGEPTAVVITTGPLTSVKEQAAGVYAAALARRGFAALAFDHRTFGESEGVPRQLEDPLGKAADIAAAVSALEQDARFSGKPVVALGVCAGGGYMARAVADDPRIRAFAGVAGVYPDTAAAPPDAAVVERGRLARERRLATGEVESIPAVAADNGDVAMPLREAFEYYGTDRGAVPNYTNAFAVESFEHSAVFDAQEAAARLAVPFLLVHSEHALVPPWARAFYAAVTSPKSELWLDSVGQIDFYDDPRLIDAAADAAGALFRDAVAPADDQVRSNV
>NZ_CP041695.1|WP_039818716.1|2419417_2420263_-|3-hydroxybutyryl-CoA-dehydrogenase
MQRIGVIGGGTMGAGIAEVAARAGGSVLVLERDTEAADAAVARIEKSLARAVKSGRLEQAAADEARARITLTTAIDDFADRELVIEAAPEIESLKTDFFTKLDGIVSPETILATNTSSIPVIRLANATANPGRVVGVHFFNPVPVLPLVEIVVTLKTDREVADKVTAYARDILGKRTIESKDQAGFIVNALLIPYLCSAIRMYETGFASAEDIDEGMVSGCAHPMGPLRLTDTVGLDVTLAVAESLYAEFGEPQYAPPVLLRRMVDAGYLGRKTGRGFYTY
>NZ_CP041695.1|WP_143983992.1|2417293_2419342_+|MBL-fold-metallo-hydrolase
MRETSEPPRPHLSRRSVFSMGAAAVVAAGMGAGVSGCGDDSAASEAEQARKIPIDPSGHIVDRQQQATAALPFSDQQDFADADRGFVAALEPDVVKDANGNVVWDNDSYSFIQGTCPNSVHPSLWRQSQLVLEQGLYEVTPGFYQIRGLDLSNMTLIEGDTGVIVIDPLISTETARAGLDLYRANRGDKPVVGVIYTHSHVDHFGGVMGVTTIDDVRSGRVPVLAPQGFMDHAVSENIYAGTAMARRSAYMYGAALPRNDRGQVGAGLGMTTSTGTVSLIAPTRDITATGQEEVIDGVRIVFQMTPGTEAPSEMNFYFPDHRALCMAENATHTLHNILTLRGALVRDAHVWSRYLTEAINLFADKSDVAFASHHWPTWGTDRITEWLSLQRDTYAYLHDQTLRLLNQGYVGTEIAEMMRMPPALEAKWYNHGYYGSVSHDVKAVYQRYMGWFDGNPAHLWEHPPVEEGKRHVEAIGGAEEVLKKARAAYDDGDFRWTVQLLNYLIFAEPDNEKAKMLQASAFEQLGYGSENGTWRNFYLSGAYELRNGNFGTPTKPTSPTMIAALTVDQVFDSVAFLVDGPKAWDLHMVNDWVITDENTTYRTELRNGVLIHFVVGPDFTGPDPDATLTLSRPTLISVLTGAKPVEDAIASGDVRVSGDPGKLRQLTGVLDTPDPNFNIVTP
>NZ_CP041695.1|WP_143980561.1|2415049_2417041_-|NAD-dependent-DNA-ligase-LigA
METGERIQQLADRIMALRDAYYQGSPLVADAEYDAIEDELRDLVAAHPELTPDPNPLEQVGAPTVLHAPIRHARPMLSLEKATTPEQVEAFFNRFPGQPVVVMPKLDGLSLSLVYEDGRLTRAVTRGDGTTGDDVTVLVRALVDGVPERIEAPGRVEVRGEAVMLRSTFAAYNTAHPDKPLINPRNAAAGTLRAKDPATVAERRLRFFGFDLDTSAGGAALDLEEGLTTLGIAGAQMRHCTDAAQAQAAITAIEQGRNALDYDLDGAVLRLADRDAYAAAGTRSSSPRGALAFKFAAEEKTTLLADVVWDVGKTGKIVPVAWLEPVFVGGTTVTKATLANQEVIRARDIKIGDTVLVRRAGDVIPFVAGVLDASKRTGAEREILPPTACPSCEQPVTEQGNSRELFCTNVSCSAQTVRRLIHWASRAAADIDAIGPVWIERLAEAGMLTNPSDFYTLTKESLLDFDRIGEVSAQRMIDSIDASRQVGLRRALIGLAIPMASDGTAARLARSGFASLEEVAEAGEERLVAVEDIGAKVAASLITHLTRLRPELERLRAAGVSLDVREEDLPPVVAAGAPLAGKTVVITGAISDPRSGEKVARPTFQRLCEKAGATAASSVSANTDLLITGAGVGDAKLTKAEKLGVEVVDQGRIWTMLIDANIV
>NZ_CP041695.1|WP_143980568.1|2428485_2429979_+|NADH-quinone-oxidoreductase-subunit-M
MLSVLVFLPLAAALILAAVPRLGDRAVRWAWVAASAAEVVLVAALWWSYRRTPPAPGDFAFTERVDWIPSLRASYHLGLDGFSLPLVAMTTVLFLACAVYSLRETRRVRWFAALFLFLETVCLGVFVSLDLVLFFVFFDLSIVGMYFVINGWGHGQARRAALQFFLYTFIGSLALLLGFIILYLAADPHTFDIVELTAANPLADNTVRGSIALAAIVLGLAVKTPTVPFHTWLPPAHTEAPGAGSAVLAGVLLKLGTYGFVRIAMPLLPEAWRRFALVLLIVGVVSVLYGALVALAQRNFKRMIAYTSVNHMGYILLALGAAGLVAGNSEQARTLAISGAVTQMVSHGLITGALFLIAGVLYARRETYDLDAFGGLAAAAPVLAAATAVASMASLGLPGFSGFIAEFQVFLGSFAPAPVLTAIALTGILITAALLLRAYQSIFLGPKRIGEFTDVTAPEAWSIIPLLAGSLVIGLAPRFLLDVIEPSARMLGLLVEG
>NZ_CP041695.1|WP_143983995.1|2430037_2431435_+|NADH-quinone-oxidoreductase-subunit-N
MGADLAALAPEAALAAAAVLGLLLGSFLPRTWQWPVRLLAAIAAITTLVTTVAVWNDPPATIFEATYDIDTATNAVRLTVAVSLLLILALSWPGTRAAARESEFVVLLTLAGLGAVLLAGAADLLVLITAYLLASIPLYALTAFEKDSAGVEAALKYYLLGALFGTTMLLGAALVLGAGGATTYSALAEAAPTAPRAALAVGAVALLGALLFKAGAVPAHFWVPDVTQGTHAAVAAVVTTVPKLGAIVAISRFGTVVSADGELRWGVLIAVIAAATMTLGNLAAFFQTDVRRLLAYSTISQAGYLLVGVAAVGRSELAVPAILLYLAAYAVTNLGAFAVVCALPDRRALGDYTGLLRRRPALATALLVCLFGLIGTPPTGVFVGKLTVFTAAFDAGLGWLAVLALVNTVASVFYYLRWVVPVVRGGGDIEPSPPGAAAVTAYAAAVLSVLIGLLAGPVWDALEFG
>NZ_CP041695.1|WP_143980569.1|2431592_2432213_-|(2Fe-2S)-ferredoxin-domain-containing-protein
MSRRHILVARPTPAGVDLPAVEALARACEMGYALLDQGEPTIHQVLDAAADDDVPVTLIPLAVPRDRYLETWIARAVANWKETRDRDLDLRMTESIDGTADFAALIRARNQDAGTPVTASPRAFRSPAWSEIPEHSTHILVCRGPRCTVYGAAELHRTLRDTHPDALITPTGCLHPCNLGPLYITYPDGRWHSGAAVETAEADRVG
>NZ_CP041695.1|WP_143980570.1|2432209_2433013_-|ATP-binding-cassette-domain-containing-protein
MTAHLTTAHLTTSALTLAYGDTPAVTDATVDFPAGALTVIVGRNGCGKSTLLRGLARLISPAAGAVLLDGGDIGRLPARTLARRLGMLPQQPTAPDGITVADLVGRGRHPHQRWFRQWSEADEAAVHRAMAATDTLELADRSLDELSGGQRQRVWVALAVAQDPEVLLLDEPTTFLDLTHQLDVLDLLRNLLPRTIVVVLHDLNLAARYADHLVAVRDGRVVAQGAPSEIVRPDLVAEVFDLDCTVIDDPATGTPLVVPAARKVRTA
>NZ_CP041695.1|WP_143983996.1|2433009_2434056_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MLPPGTVLLRSPGGRIVVRVQRRSALLTVVFTVAALVVAAWSLTVGHFPLTVGDVLRVLGGGGTLIEYDVVVRDRLPRVLTGLCVGAAFAVSGAILQRVATNPLVSPEIIGINTGASLGALVVSVVLGGSGPLLVGGALAGSLLAMAIILAVATRNGLDGYRLVLVGIGVTAMLSAAISFVLTRANIYEAHTAARWLTGSLANRDWSHVALGVAALAVVTPPLLVLARTLRLLELGDELAATLSGRRGPHRTTLIVLAAVAATLATAAAGPVAFVALVAPQIVRRLLAERDAGLVPAAAAGALLVVTADLAARRLFPAELPVGVVTAVLGAPVLVYLLARATRIGHAG
>NZ_CP041695.1|WP_143983997.1|2434073_2435045_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MPVALVALALVCLASLRVGTHPITVDQVAAAFTDFRGTDADRVVRYIRLPRTVAGLLAGIALALAGAVMQGLTRNPLAGPGLLGINSGASLAIVIAMGVLGLSAPGGVVWFAFLGAAVAAVFVYTLGSLGFGGATPVKLALAGAACAALCGSITTAVTLLDRTTFDNFRFWVVGSLTRADIESVWAITPFIAVGTVLAVAVARSLNALAMGEDMARTLGTRLVTVRAVGAAAVVLLAGAAVAIAGPVAFIGLVIPHIARALAGQDYRWILAWCAVLGPTLLLAADVLGRVVARPQEIQVGIITAFAGSPFFLYLVRTRKVATL
>NZ_CP041695.1|WP_143980571.1|2435068_2436103_-|ABC-transporter-substrate-binding-protein
MTTFVSARLRIGALLAGAVALAGCAPAADTAVGDAAVTRVNCGIDIGVDAPPQRIYAAYQPSIEIAHALGVTDRLVGTAFLDAAVLPEYRDAQASVPYVEKLPSRDELLSQQPDFVLSGYNGVFAKSAQASVGTRASLHELGVRTWVLSPLCPSADGLADEAIDPATVRFDNVYADLRDLGALWGVPERAEQVATDLRDRIEAVRATVAGAERPRVAVVTPKDDGSYTVAGGIDFVTRIIEAAGGVNAFADLTARRNVPIGAEEIIARDPDIILTSLCCEAGYTRADGQSQADTITGNPAFANLTAVRAGAVHPFLFADRAAGVRIAHATELVAELIHPDLFGR
>NZ_CP041695.1|WP_143980572.1|2436564_2437455_+|methyltransferase-domain-containing-protein
MHDAAPTADDTAIADDTAIADDTAIADNRANWDDRADVHARSGMYDVDGFLNEPTRISTVVRNDLSVLAPHLPDTGIRDRSLLHLQCHIGTDTVSWARLGAVDVHGLDLSPNSLRHAARIAAADGREITWVEGDARFASALLDRRFSTIVTSAGTIVWLPELDAWAQSVHDLLEPGGVFLIRDDHPLLGALGFEPWEISEDYLSGGGVQTYTDSGSYTPGSAGQIAHATNHEWRHDLQEIVTVLLDAGLVTESLRELPYMDWHAFPELVACPEGWTLPAGAPRVPLNFAVVARRPR
>NZ_CP041695.1|WP_143980573.1|2437463_2438498_-|AsnC-family-transcriptional-regulator
MQDHCEPIGEDELALIHALQLRPRASWTELGAVLGVDPVTAARRWSRLRARGAAWVTVSPGPRLLDRITVAYVEIDCAAGEAATVAARLATHPHMVTIERTASAQRLFTTVAAADLAAMSRYTLDILPTLPHIGAVHASLVTHMFAEGGDWRIDALDPAQRTRLTAPPARSPADRDRFRLTEVDRALLGLLARDGRTPYAELAAALAVSTSTVKRRVDDLTGLGLFRFRCDFARPLGGWPVAVTFRATVPAADLPRIGHAVVALPQTRNCAATTGTHNLLVQAGLHTMSDVLRFENTLTALHPAMTIAERVITLRHDKLLGHLLDRYGRTESVVAADIWSEPGA
>NZ_CP041695.1|WP_143980574.1|2438608_2439769_+|lactate-2-monooxygenase
MAFGDYQNEIYFNGLRGVVPPLPVSFAELRDRARAAMPPSVWSYVAGGAGDERTQDANVTAFDHWGLIPRMFVGAKQRDLSVELFGTTWPAPVFLAPIGVIGLCAQDGHGDLATARAAARTGVPMVASTLTVDPMEQVAAEFGATPGFFQLYTPTDRELAASLVRRAEQAGFRGIVVTLDTWVTGWRPRDLSTGNFPQLRGHCLANYFTDPVFRAGLDRTPEEDPQAAILRWIQLFGNPLTWDDLPWLRSLTELPLIVKGICHPDDARRAVDGGVDGIYCSNHGGRQANGGLPALDALPEVVAAAGGVPVLFDSGVRSGADIVKALALGASAVGIGRPYAYGLALGGADGIAHVLRTLLAEADLIMAVDGYPTLKDLTPEALRAVR

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Crispr_ID: NZ_CP041695_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041695_6

2653172-2653249

Orphan

Consensus_repeat	Method
CCTGCGCCGAATGAGTGCCTGCACCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041695_6

>merge|NZ_CP041695|6|2653172-2653249|CRISPRCasFinder
CCTACGCCGAATGAGCACCTGCGCCGAATGAGTGCCTGCACCGGAATGAGTGCCTGCGCCGAATGAGTGCCTGCACCG

>NZ_CP041695|6|6|2653172-2653249|CRISPRCasFinder
CCTACGCCGAATGAGCACCTGCGCCG	AATGAGTGCCTGCACCGGAATGAGTG
CCTGCGCCGAATGAGTGCCTGCACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041695.1\|WP_085996412.1\|2647712_2648474_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP041695.1\|WP_143984024.1\|2644091_2645786_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP041695.1\|WP_143980704.1\|2646613_2647012_+\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP041695.1\|WP_143980703.1\|2641629_2642529_-\|NERD-domain-containing-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143984025.1\|2656155_2657772_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238733
NZ_CP041695.1\|WP_029930634.1\|2649437_2650001_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133380
NZ_CP041695.1\|WP_143980710.1\|2660596_2661316_-\|anti-sigma-factor	unknown	unknown	gnl\|CDD\|378389
NZ_CP041695.1\|WP_143984023.1\|2642652_2644026_-\|DUF2252-domain-containing-protein	unknown	unknown	gnl\|CDD\|313268
NZ_CP041695.1\|WP_143980707.1\|2655684_2656098_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143980711.1\|2661308_2661965_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|182015
NZ_CP041695.1\|WP_029930639.1\|2645942_2646554_+\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632
NZ_CP041695.1\|WP_143980708.1\|2658315_2658873_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|224321
NZ_CP041695.1\|WP_143980712.1\|2662354_2664544_-\|malate-synthase-G	unknown	unknown	gnl\|CDD\|235097
NZ_CP041695.1\|WP_143980709.1\|2658859_2660359_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184249
NZ_CP041695.1\|WP_143984022.1\|2641128_2641617_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_CP041695.1\|WP_029930637.1\|2647203_2647668_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|224630
NZ_CP041695.1\|WP_143980713.1\|2664726_2665473_+\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|235500
NZ_CP041695.1\|WP_039813340.1\|2658014_2658281_-\|WhiB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376791
NZ_CP041695.1\|WP_143980706.1\|2653328_2655533_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP041695.1\|WP_029930635.1\|2648780_2649254_+\|bifunctional-nuclease-family-protein	unknown	unknown	gnl\|CDD\|376830

Protein	Function_ID	Function_description	E-value
NZ_CP041695.1\|WP_085996412.1\|2647712_2648474_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	4.5148e-18
NZ_CP041695.1\|WP_143984024.1\|2644091_2645786_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	2.61831e-49
NZ_CP041695.1\|WP_143980704.1\|2646613_2647012_+\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	2.94507e-62
NZ_CP041695.1\|WP_143980713.1\|2664726_2665473_+\|glucose-1-dehydrogenase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	3.46667e-69
NZ_CP041695.1\|WP_029930634.1\|2649437_2650001_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133380	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.	2.44654e-21
NZ_CP041695.1\|WP_143984025.1\|2656155_2657772_-\|VWA-domain-containing-protein	gnl\|CDD\|238733	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Not much is known about the function of the members of this subgroup. All members of this subgroup however have a conserved MIDAS motif. .	1.67306e-23
NZ_CP041695.1\|WP_143980710.1\|2660596_2661316_-\|anti-sigma-factor	gnl\|CDD\|378389	pfam10099, RskA, Anti-sigma-K factor rskA. This domain, formerly known as DUF2337, is the anti-sigma-K factor, RskA. In Mycobacterium tuberculosis the protein positively regulates expression of the antigenic proteins MPB70 and MPB83.	2.20138e-17
NZ_CP041695.1\|WP_143984023.1\|2642652_2644026_-\|DUF2252-domain-containing-protein	gnl\|CDD\|313268	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252). This domain, found in various hypothetical bacterial proteins, has no known function.	4.80857e-148
NZ_CP041695.1\|WP_143980711.1\|2661308_2661965_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|182015	PRK09646, PRK09646, ECF RNA polymerase sigma factor SigK.	5.25485e-70
NZ_CP041695.1\|WP_029930639.1\|2645942_2646554_+\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	4.00752e-22
NZ_CP041695.1\|WP_143980708.1\|2658315_2658873_-\|HNH-endonuclease	gnl\|CDD\|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	4.06758e-15
NZ_CP041695.1\|WP_143980712.1\|2662354_2664544_-\|malate-synthase-G	gnl\|CDD\|235097	PRK02999, PRK02999, malate synthase G; Provisional.	0
NZ_CP041695.1\|WP_143980709.1\|2658859_2660359_+\|hypothetical-protein	gnl\|CDD\|184249	PRK13693, PRK13693, (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional.	3.52755e-48
NZ_CP041695.1\|WP_143984022.1\|2641128_2641617_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	1.01922e-10
NZ_CP041695.1\|WP_029930637.1\|2647203_2647668_+\|FHA-domain-containing-protein	gnl\|CDD\|224630	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms].	2.98964e-29
NZ_CP041695.1\|WP_039813340.1\|2658014_2658281_-\|WhiB-family-transcriptional-regulator	gnl\|CDD\|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	6.6538e-10
NZ_CP041695.1\|WP_143980706.1\|2653328_2655533_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.14638e-100
NZ_CP041695.1\|WP_029930635.1\|2648780_2649254_+\|bifunctional-nuclease-family-protein	gnl\|CDD\|376830	pfam02577, DNase-RNase, Bifunctional nuclease. This family is a bifunctional nuclease, with both DNase and RNase activity. It forms a wedge-shaped dimer, with each monomer being triangular in shape. A large groove at the thick end of the wedge contains a possible active site.	6.60617e-61

>NZ_CP041695.1|WP_029930634.1|2649437_2650001_+|MerR-family-transcriptional-regulator
MGDQPQDVVQPGLFPDDTVPDDLVGYRVPTACQAAGITYRQLDYWARTGLVAPSIRTATGSGSQRLYSFKDILVLKIVKRLLDAGISLQNIRIAVDHLRSRGVEDLAGITLFSDGTTVYECTSPEEVVDLLQGGQGVFGIAVSGAMRELTGAIANFPAERAEEGNATDRPEDELAFRRKARLNAKTG
>NZ_CP041695.1|WP_029930635.1|2648780_2649254_+|bifunctional-nuclease-family-protein
MSEMRVIGIRVEQPQNQPVLLLREVSGDRYLPIWIGQAEATAIVLEQEGVTPIRPLTHDLVKILIKELGHTLKEVRIVDLQEGTFYADLVFENGPRISARPSDSVAIALRVGCPIYAEEAVLEEAGLVMPDEREDEVEKFKEFLESVSPDDFKATDS
>NZ_CP041695.1|WP_085996412.1|2647712_2648474_+|MerR-family-transcriptional-regulator
MSIGSVLDLLRPDFPDITISKIRFLESEGLISPERTPSGYRRFAVHDVERLRFVLTAQRDQYLPLKVIKEQLEAIDKGAATLGVREARARAGGGGVDAVNGSAPTDGAGRLRRLGVVPGEVSPEELRFDHEIRVTRADLIDQAGIDEKFLQELIRAGLITPGAAGFFDTDAVTLARTAQALSEFGLEARHLRAFKLAADREAALVAQIAAPIAKSRDEDARARAEETVRELAALSLTLHTCLVKTAVRASLGG
>NZ_CP041695.1|WP_029930637.1|2647203_2647668_+|FHA-domain-containing-protein
MSEHKDPVYGESAAETTSVFRADFLNEVEPRTEQTGEQPVGVEGLPAGAALLVVKRGPNAGSRFLLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRQDDDTFQVVDVGSLNGTYVNREPVDSSELQNGDEVQIGKFRLVFLTGPRPQSSDAGAL
>NZ_CP041695.1|WP_143980704.1|2646613_2647012_+|glycine-cleavage-system-protein-GcvH
MTDLPQDLRYTEEHEWVAKVGPTRVRVGITDYAQSQLGDVVFVQLPEVDKDVAAGDSIAEVESTKSVSDIYAPLAAKVVAVNEDLVSSPETINSDPYGDGWMFELELDDADGVDAVLGELLDAAGYQGVIGG
>NZ_CP041695.1|WP_029930639.1|2645942_2646554_+|CDP-alcohol-phosphatidyltransferase-family-protein
MTSERNAESVFGDRILTVPNVLSVIRLVGVPVFLWLLLVREADGWAFALLVVSGVTDFLDGKLARLLDQSSRLGALLDPLVDRLYLVATLGGFLIRGILPWWVVAILIGRDVILTVTLGVYKRRDLPPPEVIYLGKAATFALMSALPWLLAGQMDWAAAGFGAAFGGALLVWGTVVYVWTGILYVGKAVAVARAVPAVPRVTP
>NZ_CP041695.1|WP_143984024.1|2644091_2645786_-|FAD-dependent-oxidoreductase
MPDFDYDVVVIGSGFGGSVSALRLTEKGYRVAVLESGRRWTPENLPKTNWNVRKSIWAPRLGMTGTQRISVLGKCAVFSASGVGGGSLIYGNTLYEPLPDFYADRQWAHITDWRTELAPYYDQAQRMLGVEPNPRLTPADDVIRSVAEDLGVADTFHPTRVGVFFNEENPGAEVDDPYFGGVGPRRSGCVHCARCFTGCPHNAKNTTVKNYLYLAEQAGAHVFELTTATRVRPIAGGGYAIETQRSDRWIRKGRKVFTAEQVVFAAAALGTQKLLHQMRDEGVLPRLSPRLGELTRSNSEAILNVVSKARDDFAQGIAITSSIHPEPNTHIEVCHYGKGQNGLFPLSVPIVDGGAFRFLRFLLAILLHPIVFARSLNAHRASEKSVILLVMQSLDNSLTSFRRWGQLKTRQGTGEPNPTWIPLAHDVGRRFGEKVDGDVHSLIMDVFNIPATAHYIGGCVIGTDPNTGVVDPYQRVFGHPGLHIADGSAVTANLGVNPSLTITAQAERAMAFWPNRGEPDPRPELGQPYRRIAPVAPRRPTVPDTAPGALRLPIFPTDAPVSGH
>NZ_CP041695.1|WP_143984023.1|2642652_2644026_-|DUF2252-domain-containing-protein
MIDFRSPVAADEVLARGRALRERTPLSARDRDAVAPDRPGVLDFLEASNRGRLDHLIPLRMGRMVASPFAFFRGCAGLMAADLAPAPVSGLDAQLCGDAHAANFGLYGGQRGEIVMDINDFDETVRGPWEWDLERLAASLVLAGREGDASEDDCRIAARDAARSYRLAVGALAEMPFLTSWTALADESAIGRTRADALLDDFQRAAKKARKNTSAKVARKWTEIEDHETGIGKRTFVPDPPVLSTVDPAVAEAVIDGLTGYVGTLRESRRRLITRFSVSDIAFRVVGTGSVGFHSYLALLHGNGDEVLVLQLKQAAPAALAPYLPAVPARHEGERIVQGARAVQAETDILLGWTTLTLDGRELPFIVRQFRNLKGGIDPSALEPDHLDDYGRLAGALLARAHARSVDPRLLAGYLANGEEFDDAVAAFAVRYADRAEADHAELATAVRTGRIAAETS
>NZ_CP041695.1|WP_143980703.1|2641629_2642529_-|NERD-domain-containing-protein
MLVRVQNTAGTHAEKVLIDWLRTWKGRGDPHGVATVNCSLFHGDRLYPFDAVVWTPTSCVVIEAEALVERLEGELEVPLSGPWRGADKIINFEGGDRRTPLDKSRDHTFALQNWFAERGLGQRVVHGAVLVVPPPGSQVRVRQLWSDPSFEVLLGDDPARLREYFDSIASRGRPQWSANDVAWAFRGLGILPYLPAPQDLLNEGFLGPVDVTLWHGGPQQAQAEAYAEEQARLEREAERPHRRIMSVPAPWYSPWKLYPRRSGELDVGGSVMRVLLTIGMVVAAVWVIWFVLAALLTYG
>NZ_CP041695.1|WP_143984022.1|2641128_2641617_+|phosphatase-PAP2-family-protein
MLAFPGTAWAVLPLLAAAALWFARRRLWWRAGFVLLAPEFAVVVNTWVLKPLWDRPLHDYLAYPSGHTVHLVAAVTAVALAADHRGFRVAAVGVGAVVLAGVTVGMVGLGYHYVTDVVGGAAAAVALVAVLYIPVRRYLPVRRIALRADGTPRAPGDPAVQP
>NZ_CP041695.1|WP_143980706.1|2653328_2655533_-|protein-kinase
MTLHQGAIFAGYAIQRVIGVGGMGTVYLARHPRLPMDVALKVLSADLGRDPAARAYFEREAEIAARLQHPNIVRVHDRGTEGDHLWIAMDYVDGPDIGQVLRDGPLAAEVAVEVIAQAADGLDHAHRRGVLHRDVKPANLLTTAVRQRRHVYLTDFGIARSLDDTTTVTTSVRATFAYAAPELLTGHPLDRRADVYALGATLYRLLTDTVPYPRDTLAAVLHAHLHQTPPQATSCRPDLPAGVDRVIATAMAKDPADRYPTCTALAEAAVTALRESATLPAPRPLPDSPPLPAPQPLPDSRPLPAPPAVPASPSTDAGQTIAGQTDAGQTNAGQTNAGQTDAGPAAATTPPPGCPPMDGSWDTPTAPAPPPSREPTEPPVPQAKSPAITRRRLLSALGIVAPVAAVATAVVLLTQEDSSGRSDAPGQRDAPRAGSRLRTVLTGHTGLVHDVRFSPDGALVATASFDKSARLWDVGAGGPAGEPLTGHTDRVRSVAFAPDGATLATTSADTTARLWDVRTGRPLGEPLSDAAGSINAVAFAPDGVLLATAGSDSLIRLRGVDSRQQVGAPLHGHTAAVNAVAFSPDGTMLASAGFDMTVRLWDVRTRRQLGAPFLGHTDRVRTVIFSPDASLLATTGADGTARIWDTGTHRQLGDAIPGHTGGVRAVAFAPDGATLASGGDDGTVRLWDVTTRRQLGEPLTGHTDAVYAVTFSPDGRLLATTGSDATLRLWEPAV
>NZ_CP041695.1|WP_143980707.1|2655684_2656098_-|hypothetical-protein
MAHTTSTDSSLKQGFAAGTSIAAAVLLLVVGVLSILEGISAAASDDLVIVDVNDYVYKLNTTGWGWIHIILGAIVVIAAIGLMAGTTWGRAAAMILAALSIIANFLWLPYYPIWSIVIIALDVVIIWAVATWKPDAV
>NZ_CP041695.1|WP_143984025.1|2656155_2657772_-|VWA-domain-containing-protein
MVAVVVLAVAVVGWSWLAERAKDRDAAAAAACAEGTTTLHVTVDPDIAEPVRAAAQRYNATNPRVRDHCAQVEVTARASAAVVAAFTADAPWNPELGPQPALWIPDSSRSVALMRVPGLVEGTPAPVAVSPIALAVPDQLRRALEAAQTTWADLPGLQQGSLAEVGLGGWGGLRLAMPPGDDSLAAALAVGSGVSGSDPLTAEAASSGQVTSAISRLAAGAPEATDLGRALLDAAGADDLPAATVHAVTATEQRIKANRGLTAFRPLGATPVADYPAALLTGDWVDQTQNLVAGLFADYLRAPEQAKLFTDNGFGAAPPAGPPVPEQAVLLRVQEVLANPVLGVSATALVDVSSSMATTEGAATRLANTLAALQSVMNVMPPDFGLGVWTFGKNLDGNQPYRVVSRTAPLTDAHRAELVRELSDISATSTQPDRAYPTLEAAYRDAVANYAPGRTNSILLVTDGPDDDSPVTGDQLLATIAALADPARPVRIDVIAIGGQGPQTLRTLTEQTNGTFTQVPTTDELAFGSAMNQALTTP
>NZ_CP041695.1|WP_039813340.1|2658014_2658281_-|WhiB-family-transcriptional-regulator
MTKTAVRELSLADLLPISDSKDYWARAACKGDPNHDAWFPYPSQDFDYARTICAACPIRRECGDFAASTGQSGVWGGHEYDRGTLIRD
>NZ_CP041695.1|WP_143980708.1|2658315_2658873_-|HNH-endonuclease
MVTPMLFRHADDPPAITVDNWIHTGVLLLNASYETLTEIRAERAVVLLISGAAETVVDRDPHFPIRSKSLELALPETIRLRRYVYLEHSVTVTDGSRATLPAVLRRDAYRCGYCAGWARTVDHIRPRSRGGPNTWDNLIAACGRCNTYKADRTPEEAGMRLLWEPRAPQDMAKKQRRIWKELAAS
>NZ_CP041695.1|WP_143980709.1|2658859_2660359_+|hypothetical-protein
MGVTMFREKEGGDERKRRVRPARRGGRYSGPAVRACPYHCRAASTPDAKPPPPSLGRRPLGRDDRRNSWWHNGPAVVVRILSCGFCRADLHPRRTSTTVEWPDLFHRNRLRIRNEASATARAPARERRAGECVVDHTSVPRAIRRPSGYRLVGNSFPVLEEKSVLDATLADPHTLVGRTYRLRDHYEVGREQVREFARAVQNDHPAHLHEDVAAGYGCATLPAPPTFAALLGGRVQAALGQLLTDCDLTSTVQTEQTFDFHRPILVGDRLTSHIGLLSRRKAFGGDLMVVGNEVTDAHGGAVLTATTGLVARADGGPDERFAAIGENVLHHGLLDAEPPAFDEVEAVSPVHPAPRPVTGGRDLAAVAVGDRLPSRVYRLTLGDLVRYAGVAGDPNPIHWHPASAEAVGMGPGVLAHGMLTMSLGAGYLTAWTGDPTALRRYRVRLSTPVRVLPGTTGEIELGGRVSEIDTATRTATIALTATHDGRRVFGGATATVALA
>NZ_CP041695.1|WP_143980710.1|2660596_2661316_-|anti-sigma-factor
MPDHSPDTDLLDLAYPYALDALSDDERAAVEERVRTADAAAATAFRDSVRDIRETLAALTVVDRHPAPDHVEASVQAALDRQLAATAPATRTWPVRWLAAAAVLILAIGVGTFLAIDRAQQRDSGAVTAQRVLAEPDARQTRAPVTGGGDIVVTTSARLDAAAVSFDAVPAAPPNHTYQLWLIPEGGQPVSAGVLDDLPASDDPAVVPLDHADLLALSVEPTGGSDQPTTDPVVAVPLD
>NZ_CP041695.1|WP_143980711.1|2661308_2661965_-|sigma-70-family-RNA-polymerase-sigma-factor
MADEGRTLSADAGDNRVERSESCPAVRPTPDPEQMRRLAALLRGVAAGDRDAFTAFYRSTHDRVYGLALRILRRPPAAEEVTQEVYLYVWNSADQYDKRLASPIGWLMMLTHRRAVDRARTEYSRGHRDFAYGQRHLGRDHDIVAETVTQRSEERAVLDCLATLTDIQRETVALAYYGGRTYPEVADDLGIPLSTVKTRIRDGLRRLRSCLTGSVTDA
>NZ_CP041695.1|WP_143980712.1|2662354_2664544_-|malate-synthase-G
MTERIQVGGLQVAKVLHDFVENEALPGTGVDSAAFWSGAEAVINDLAPRNRALLTERDDIQAKIDEWHRAHPGTGYDKAAYKQFLTEIGYLRPEPADFQIGTENVDAEIATTAGPQLVVPVMNARFAINAANARWGSLYDALYGTDAISEENGAEKGTGYNKVRGDKVIEWARNFLDDAVPLITGSHVGSTKYSIEDGELVVGLEDGTDIGLADPSALVGYLGDPANPTSVLLKHHGLHIEIQIDPSSPIGSTDTAGVKDVVLESAVTTIMDFEDSVAAVDAEDKVLCYHNWLGLMKGDLAEEVSKGGKSFTRTMNPDRVYTALDGSELVLHGRSLLFVRNVGHLMTSDAILDADGNEVPEGIMDGLLTVLIAKHALNGDTKLKNTRTGSIYIVKPKMHGPDEVAFTNELFGRIEEVVGLPANTLKVGIMDEERRTTVNLKACIHAAKDRVVFINTGFLDRTGDEIHTSMEAGPMVRKAEMKGQQWILSYEDFNVDTGIATGLPGKAQIGKGMWAMPDLMADMLVQKVGHPKAGANTAWVPSPTAATLHATHYHLVDVFKRQAEIAKGGARASVDQILEIPLAADTNWSAEEKQQELDNNSQGILGYVVRWIDQGVGCSKVPDIKDVGLMEDRATLRISSQLVANWLRHGVVSEDEVIASLERMAPVVDRQNAGDPSYRPMAPDFASSIAFQAAKELVLEGTEQPNGYTEPILHRRRREAKEYNAKFGA
>NZ_CP041695.1|WP_143980713.1|2664726_2665473_+|glucose-1-dehydrogenase
MGKSLSEKVVVVTGGSRGLGREMVHAFADAGAHVVIASRKLDACAALAAEVRAKYGVRALPVACNVGVWEQCDALVDAVYAEFDRVDVLVNNAGMSLLYPSLDRVTEAMFDKVIATNLKGAFRLSARIGPRMAAAGGGSIINISSIEAAKPEPLAVPYAAAKAGLEALTGGLAQTYGPAVRVNTIRCGAFDTDIAKAWPQEMRDHLAQHNALGRIGVPADIVGAALFFASDASAFCTGATLALDGGWR

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Crispr_ID: NZ_CP041695_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041695_7

4491265-4491352

Orphan

Consensus_repeat	Method
CGAACGGCGCGAAGCAGTCACGCTCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041695_7

>merge|NZ_CP041695|7|4491265-4491352|CRISPRCasFinder
CGAACGGCGCGAAGCAGTCACGCTCACGGCGGCAGTTCCAGCCGATCGCGCCACGGGTGAACGAACGGCGCGAAGCAGTCACGCTCAC

>NZ_CP041695|7|7|4491265-4491352|CRISPRCasFinder
CGAACGGCGCGAAGCAGTCACGCTCAC	GGCGGCAGTTCCAGCCGATCGCGCCACGGGTGAA
CGAACGGCGCGAAGCAGTCACGCTCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041695.1\|WP_143981885.1\|4481472_4481988_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378696
NZ_CP041695.1\|WP_143981883.1\|4479901_4480789_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|274926
NZ_CP041695.1\|WP_143981896.1\|4496909_4498061_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143981887.1\|4482527_4483694_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|224732
NZ_CP041695.1\|WP_081592592.1\|4496031_4496574_+\|amino-acid-N-acetyltransferase	unknown	unknown	gnl\|CDD\|236132
NZ_CP041695.1\|WP_039815798.1\|4498434_4499808_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|365848
NZ_CP041695.1\|WP_143981891.1\|4488238_4489399_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380650
NZ_CP041695.1\|WP_143984215.1\|4495246_4495798_-\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|273139
NZ_CP041695.1\|WP_143981894.1\|4494221_4494629_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP041695.1\|WP_143981886.1\|4481998_4482190_-\|DUF3046-domain-containing-protein	unknown	unknown	gnl\|CDD\|378612
NZ_CP041695.1\|WP_143981884.1\|4480857_4481319_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319898
NZ_CP041695.1\|WP_143981889.1\|4484837_4486010_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP041695.1\|WP_143984214.1\|4494722_4495202_-\|nicotinamide-nucleotide-amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|334938
NZ_CP041695.1\|WP_143981892.1\|4489507_4490452_-\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176191
NZ_CP041695.1\|WP_143981890.1\|4487458_4488232_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP041695.1\|WP_143981895.1\|4496614_4496899_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183800
NZ_CP041695.1\|WP_143981893.1\|4491419_4492238_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143981888.1\|4484048_4484759_-\|PIG-L-family-deacetylase	unknown	unknown	gnl\|CDD\|225031
NZ_CP041695.1\|WP_039815749.1\|4493186_4494017_-\|PspA/IM30-family-protein	unknown	unknown	gnl\|CDD\|224755
NZ_CP041695.1\|WP_143981897.1\|4499894_4500869_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173835

Protein	Function_ID	Function_description	E-value
NZ_CP041695.1\|WP_143981885.1\|4481472_4481988_+\|hypothetical-protein	gnl\|CDD\|378696	pfam11706, zf-CGNR, CGNR zinc finger. This family consists of a C-terminal zinc finger domain. It seems likely to be DNA-binding given the conservation of many positively charged residues. The domain is named after a highly conserved motif found in many members of the family.	2.61838e-20
NZ_CP041695.1\|WP_143981883.1\|4479901_4480789_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|274926	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family. Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily consists of proteins mostly from species that lack the capability to synthesize F420, and therefore most likely all bind FMN.	2.12618e-17
NZ_CP041695.1\|WP_143981887.1\|4482527_4483694_-\|glycosyl-transferase	gnl\|CDD\|224732	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms].	6.6407e-45
NZ_CP041695.1\|WP_081592592.1\|4496031_4496574_+\|amino-acid-N-acetyltransferase	gnl\|CDD\|236132	PRK07922, PRK07922, amino-acid N-acetyltransferase.	8.81846e-113
NZ_CP041695.1\|WP_039815798.1\|4498434_4499808_+\|cytochrome-P450	gnl\|CDD\|365848	pfam00067, p450, Cytochrome P450. Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures.	6.37848e-75
NZ_CP041695.1\|WP_143981891.1\|4488238_4489399_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|380650	cd19995, PBP1_ABC_xylose_binding-like, periplasmic xylose-like sugar-binding component of the ABC-type transport systems. Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic xylose-binding protein is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.	6.92163e-99
NZ_CP041695.1\|WP_143984215.1\|4495246_4495798_-\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	gnl\|CDD\|273139	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. Alternate names: phosphatidylglycerophosphate synthase; glycerophosphate phosphatidyltransferase; PGP synthase. A number of related enzymes are quite similar in both sequence and catalytic activity, including Saccharamyces cerevisiae YDL142c, now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. [Fatty acid and phospholipid metabolism, Biosynthesis].	6.19889e-34
NZ_CP041695.1\|WP_143981886.1\|4481998_4482190_-\|DUF3046-domain-containing-protein	gnl\|CDD\|378612	pfam11248, DUF3046, Protein of unknown function (DUF3046). This family of proteins with unknown function appears to be restricted to Actinobacteria.	9.52833e-28
NZ_CP041695.1\|WP_143981884.1\|4480857_4481319_-\|VOC-family-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	4.75236e-16
NZ_CP041695.1\|WP_143981889.1\|4484837_4486010_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	2.62331e-46
NZ_CP041695.1\|WP_143984214.1\|4494722_4495202_-\|nicotinamide-nucleotide-amidohydrolase-family-protein	gnl\|CDD\|334938	pfam02464, CinA, Competence-damaged protein. CinA is the first gene in the competence-inducible (cin) operon, and is thought to be specifically required at some stage in the process of transformation. This Pfam family consists of putative competence-damaged proteins from the cin operon. Some members of this family have nicotinamide mononucleotide (NMN) deamidase activity.	1.08371e-49
NZ_CP041695.1\|WP_143981892.1\|4489507_4490452_-\|zinc-binding-dehydrogenase	gnl\|CDD\|176191	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	2.12746e-75
NZ_CP041695.1\|WP_143981890.1\|4487458_4488232_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	1.03095e-102
NZ_CP041695.1\|WP_143981895.1\|4496614_4496899_+\|hypothetical-protein	gnl\|CDD\|183800	PRK12863, PRK12863, YciI-like protein; Reviewed.	1.46025e-13
NZ_CP041695.1\|WP_143981894.1\|4494221_4494629_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.24122e-07
NZ_CP041695.1\|WP_143981888.1\|4484048_4484759_-\|PIG-L-family-deacetylase	gnl\|CDD\|225031	COG2120, COG2120, Uncharacterized proteins, LmbE homologs [Function unknown].	1.89576e-32
NZ_CP041695.1\|WP_039815749.1\|4493186_4494017_-\|PspA/IM30-family-protein	gnl\|CDD\|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	2.01206e-34
NZ_CP041695.1\|WP_143981897.1\|4499894_4500869_+\|hypothetical-protein	gnl\|CDD\|173835	cd00687, Terpene_cyclase_nonplant_C1, Non-plant Terpene Cyclases, Class 1. This CD includes terpenoid cyclases such as pentalenene synthase and aristolochene synthase which, using an all-trans pathway, catalyze the ionization of farnesyl diphosphate, followed by the formation of a macrocyclic intermediate by bond formation between C1 with either C10 (aristolochene synthase) or C11 (pentalenene synthase), resulting in production of tricyclic hydrocarbon pentalenene or bicyclic hydrocarbon aristolochene. As with other enzymes with the 'terpenoid synthase fold', they have two conserved metal binding motifs, proposed to coordinate Mg2+ ion-bridged binding of the diphosphate moiety of FPP to the enzymes. Metal-triggered substrate ionization initiates catalysis, and the alpha-barrel active site serves as a template to channel and stabilize the conformations of reactive carbocation intermediates through a complex cyclization cascade. These enzymes function in the monomeric form and are found in fungi, bacteria and Dictyostelium.	4.41373e-22

>NZ_CP041695.1|WP_143981892.1|4489507_4490452_-|zinc-binding-dehydrogenase
MAIAIIATAYGGPEVLTPIEIDVPAPGPGEVTVEVRAAGVNPFDYKRYSGAFGTDPDALPMRLGGEVSGVVTAVGPDAVGPAGPIHLGDEVLARVDGGYATAVTARADRVVPKPKAVSWEVAAGIQAVGGTAVHTLAATAVRAGDTVLVHGAAGSVGATAAQLAVARGARVIGTAAPARHERLRGYGVEPVAYGPGLADRVRALAPGGVDAAIDTVGTDEAVDVSLALVADRARIATIAAFGRVAETGIKALGGGPGADPGTEIRAGAWRELLELLGADKLELVIAATYPLTEVAAAHEFVIAGHAGGKVVLLP
>NZ_CP041695.1|WP_143981891.1|4488238_4489399_-|substrate-binding-domain-containing-protein
MRTKTPLPPRNSRRTRRPGYALCALAISGLMALTACGSNTTRDDGPTTAAGGGGGSGTVGVILPETATSARWESFDKPMLEQALRAEGFDADVQNAQGDVQKFSALADGMIAQGVKVLIIAAINSEVGSTVAAKAQRAGIPTIDYDRLSLGGSSDYYVSFDNVRVGELQGQAMADALRDKPGAEVIEIEGAPTDNNATLFHQGQTNILKPLYDSGALKLVHSQPIDGWDNQKGGTVFEQLLTGNGGKVDGVVAANDGLAGAVITVLKKNGLNGRVPVTGQDATVEGLKAVLRGDQYMTVFKPIQAEAEAAAALAAALANGDKAAADALAQDVSQDPKGDREVKSVLLEPQTILKDQVKTVIDTGYVRAADVCSGDLSAICAELGIG
>NZ_CP041695.1|WP_143981890.1|4487458_4488232_-|ATP-binding-cassette-domain-containing-protein
MTEPLLDITGLNKSFGPVRVLHEVDFTVPAGSVTALVGDNGAGKSTLVKCIAGIHAADSGTVRFRGEDVRIHGPKDAAALGIEVVYQDLALADNLDIVANMFLGRERGRPWFLDEASMEEAARRTLASLGVRTVKSVRTPVSALSGGQRQTVAIAKAVLWNSNLVLLDEPTAALGVAQTRQVLDLVRRLAEQGLGVVLISHNLADVFEVADRIAVLYLGRMAAQVRAADVTHAQVVELITAGRSGELGLARPEAVAL
>NZ_CP041695.1|WP_143981889.1|4484837_4486010_-|ROK-family-protein
MTVARPDEVRRFNRSSLLRLLHIGGPATRAALATDLGLNRSTIKMLVDGLAEAGIVEERVPRQTPAGAGRGAGRPSLLVLPQPQAAVVLAVDVQVERTAIALVGFGGHILGRNSWNLHGRQRDPIEVVTHVAESAALLAGDLGVHPVAVGISVPGVVRRTDGYVHTAANLRWSEVALGERVSAVLGLPVAVGNDAEFGALAEHVRGAGRGTADAVFVSADVGVGGGLIAQGGILRGAAGYLGEIGHMTVRPDGRACHCGNVGCWESEVGQAALCRALGLPEHGPRGGIVAELRALERDSDPLARLGEYPDWLVLGLVNVVNVLGPELVVLGDLFTALPDVVVARVRDRVRERSIVSRALGGVRIEKSTLGADLKLLGAAEAAFEGVLGAL
>NZ_CP041695.1|WP_143981888.1|4484048_4484759_-|PIG-L-family-deacetylase
MEQLPEDWQRGIVIVAHPDDIEYGAAAAVARWTRQGKDIRYVLVTSGEAGIAGLPPAESGRLREAEEIAAAKAVGVAEVEFLGYPDGRVEESLALRRDLAAAIRRHRPEMVILFNFGDTWAPGYANSADHRAVGRAGLDAVSDAGNEWIFPELAELPVWSPRWAAVTGPKVTHAVDVTDTIEPAVESLVAHGRYLAALSSDPVLEQARAIVDMSTGPIEGFPAARATGFELYYFGG
>NZ_CP041695.1|WP_143981887.1|4482527_4483694_-|glycosyl-transferase
MRVAVVAGPDPGHAFPAIALCLRFLEAGDEPVLFTGPRWFDAAKQVGIGVRRLKGLAPRAEDDDADAGQRIHERAAFISTEILPDMSAMLPDLVVSDVLTAGGGMAAERMKVPWVELSPHPLYLPSKGLPPIGSGLAPGEGLSGRARDAVLRGMTARAIRQGEEQRERARAGIGLPPEDPGPAARLVATLPALEVPRPDWPDNAHLVGPLLWEPTANVLDLPPGDDPLVMVAPSTAHTGVSGMVDTVLEALDGAGVRVAISMLDTPPAELPPWATAGLGRQDELLRHASVVIGGGGHGLLAKSLLAGVPVVTVPGGGDQWELANRAARHGSSLLVRPLTAEAVRTAVRRILDEPTFAERARKASADASVVSDPVPLCHEVAAAARTHR
>NZ_CP041695.1|WP_143981886.1|4481998_4482190_-|DUF3046-domain-containing-protein
MRLTEFQELLYTEFGTARGDALLSDHVLPSMGKTGAQAIEAGIDPRDVWRALCAEFDVPKARW
>NZ_CP041695.1|WP_143981885.1|4481472_4481988_+|hypothetical-protein
MPVPRPHLGEPLALDLLNTRWMSGEGLQDLLSDVAGLRQWLADNDLAERCPADAATLHALVRTREAILRAARGDDIEALNGILEHGRIRRILTDHGPRDEVEVRDPAWLPGWLAADDLLTLMAAPDRIKQCAHPHCVLWFYDTSKNGARRWHSMATCGNRAKAARHYARNA
>NZ_CP041695.1|WP_143981884.1|4480857_4481319_-|VOC-family-protein
MTAVTAPQLATGHIGLNVTDLTRSVDFYRRAFGFEQLGASTEGEQRFAFLGADGKLVLTLWQQSDGEFSAKTPGLHHLSFQVDSLEQVRSVESVLKDLNVSFAHDGVVAHGEGASSGGIFFSDPDGIRLEVYAPSGAEAAPAPSGTAPTCGFF
>NZ_CP041695.1|WP_143981883.1|4479901_4480789_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MTTSYHPGEVAVQQRMGQSDIAQHVGRMIRAEIPHTAAAFLAEQPLVVIAAADGAGRLWASQLIGPAGFARATDERTIVVDALPTAADPLAEPLRSTRHIGMIALQPQRRRRMRVNGVTEPTERGLRITTDQVYSNCPKYITRRTIDDWSGASAVTVHRSSELTAAQQRAITAADTFFIASADPDGNADASHRGGNPGFLQVLSPTRLRWPDYRGNSMFMTLGNIAADPRCGLLIPDWRTGSTLQLTGTAEIIWDDTTFAPGSQATVDFTATEVVEIAGASPLRWGASELSPANP
>NZ_CP041695.1|WP_143981893.1|4491419_4492238_-|hypothetical-protein
MLAPAGVEPEELAQRLPEALRGMGEQAFATVRRWADPRERELRKRRRVRRRSLRLGTASGVTTIGTIGLVLISAPAWAVVVVGGGAVALVTGAAVTTKRYLQIRNDPLPPAAFQPRRLPPVRSAARAAIARLVRAERAMHGLGNQIARSGRLPADDLADTLETAGSGAAALHALAADMVAMERAASALSPTNSPVAEHIRIAAGRLDAGVAEYERIVAATAQVLAVPESAALADDLGWAMVDLRDAADRLDGWAQALTDLADGRYRATPPTA
>NZ_CP041695.1|WP_039815749.1|4493186_4494017_-|PspA/IM30-family-protein
MANPFVKAWKYLMALFDSKIEEHADPKVQIQQAIEEAQRQHQALSQQAASVIGNQRQLEMKLNRQLDEVEKLNANARQAVMLADQATNAGDTEKAIQYTNAAEAFAAQLVTAEQSVEDLKVLHDQSLQAAAQAKKAVEQNAMLLQQKVAERTKLLSQLEQAKMQEQVSASLQRMDSTLSAPGTTPSLDAVREKIERRYANALGAAELAQNSVQGRMMEVQQASIQMAGHNRLEQIRASMRGDALPSSGASPQLNQGQAAANPAQPQLDKDRSAQQQ
>NZ_CP041695.1|WP_143981894.1|4494221_4494629_-|helix-turn-helix-domain-containing-protein
MTLLREAIGESLRRARVAQSRTLREVSTSARVSLGYLSEVERGRKEASSELLAAICQALDVPLSQVLFDVSAAMADADRETERAAAAPAGAATASAAASAASGSGVTPRGGDGAFGPRFVIPAPKSDRLVLVAAD
>NZ_CP041695.1|WP_143984214.1|4494722_4495202_-|nicotinamide-nucleotide-amidohydrolase-family-protein
MTAEAPAAELVRALRAAGQTVATAESLTAGLLAATIAGVPGASAVLRGGLVVYATDLKATLAGVSADTLDTDGPVAASTAEQLAVGARIRCGADWGVGLTGVAGPEPQDGRPVGTVFLGLAGPEGTEVIRLKLSGDRWTIRVTAVRAAITELLRGVRGG
>NZ_CP041695.1|WP_143984215.1|4495246_4495798_-|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
MNVANVLTVLRIAIVPLFLAALFAGGGHDTGWRWAAAALFGIAAITDRIDGQLARKYGLITDFGKLADPIADKALIGAALVGLSMLGDLPWWITIVIGAREIGITLLRLAVVRRGVIPAGRGGKLKTLVQSVAIAVLLLPLSDGWFTAGMLLMYAAVALTVATGLDYVVQAARLWFGAPRRTA
>NZ_CP041695.1|WP_081592592.1|4496031_4496574_+|amino-acid-N-acetyltransferase
MTTRAPHSGSVDGAAAGTPAVRRARASDVPEIKGLVDIYAGRILLEKNLVNLYEAVQEFWVAELDGRLVGCGALHVLWADLGEVRTVAVHPDVKGSGVGHMLVSQLITVARELELKRLFVLTFEVDFFGRHGFAEIDGTPVTAEVYAEMCRSYDTGVAEFLDLSYVKPNTLGNTRMLLNL
>NZ_CP041695.1|WP_143981895.1|4496614_4496899_+|hypothetical-protein
MPIFAVHYTYTDATAAARTEHRPAHRAFLNGLVDQGIVLTSGPYPDGSGALLLFRVSDAEEMPKLLAQDPFAQLGLIEEVRFVEWLPVMGAFAE
>NZ_CP041695.1|WP_143981896.1|4496909_4498061_-|hypothetical-protein
MSQIALYYPWMRFRNENWLKLALLTWDHLARIRPRSATETDSDAVARLRAETDFLHDVEPVREDLRRLTNIFGDIITLGEPRVLQPYAWRAVVDSAGSAATPRRSGGPRRAYPGLAWVHVGTDGPKAHLALSRLLEEEGLAVAVEEATGPYLGMHPRLADVYRTALADVVAARQRVSPVTDDPRAHAAVGTIDRLYALLVDDDTAEPVSEDAQHAYIHFAAHAALRPERLRDVPLSTLLSFRERHAGPLRAFREHIGSLSKELESVVLVAGPESARRRLRDVYRSTTKPRLEELCRASDDFGIDAAPGLLGIKVDLPAASTRATLPALSDLAGSGTGFAFAVVPYVADRMRARRTTIQETPVSYLLTADRKLTGKALLAGMRR
>NZ_CP041695.1|WP_039815798.1|4498434_4499808_+|cytochrome-P450
MRSVNSIPTAPKAMPLLGHAGPLLRDPTRFLTSLPTTESLIRIRIGPARMVLACDPATVRQLLRDDRTFDKGGPIYDRIREVLRDSLASCPYEAHRRQRRLAQPAFRSDRLPLYAQTMTECIVDVIDSWPDDEPLNLLTEMMTITSRVTASTLLSNSLPAELLDRLLTDITTLFDGFYLRTFLPPPLDRFPSPGNLSYRRAHARLRRTVDDIIAARRRAPADHGDLLSALMSARDVEHDGGGMNDEEITDTIIAFFLAGTETTATTLAWALYLLARNPDVEHRLHAEVDAVLPDRTARYPDLRRLTLTERVITEALRVYSPAWLSMRVVTGPTTLGGYTLPAGTTVAYSPYLIHHRADVFPEPEIFDPDRWDPDSAQPPPEHFIPFGGGARKCIGDRFGMTEATLALATIASRRRLRLSTTRDVTPATGLLLRPRNLLMTASSRHTTPVRAGDKADR
>NZ_CP041695.1|WP_143981897.1|4499894_4500869_+|hypothetical-protein
MSATAAGVWAWVDSFELTPTDSSRKHLERTETPWIASLFYPQAAPHVLPVLTQHLAWAFIVDDQFDDGPVGRDVAQATAAVTELRAQLETTPTRARSRPARALRDIWTRAVARRSRGWIEQFSTSTGEWLDSLRLDAEDRRHDYRPTIAEYRRRRRYGSGMPMFFDLAELSVGVDVDPRLRALPEFSRARLWLAEWIGLHNDIYMARKDLEIDPAHNAVCIVHRTGGLSLEQSLVAVSDMADHCMRRYLECERECRSAFDATAASARDRADAEQCFVSYRQVCRACFDIEGRTQRYRNASDYLAAARHSRDEAPDWTAQRLFGD

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Crispr_ID: NZ_CP041695_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041695_8

5886885-5887004

Orphan

Consensus_repeat	Method
CGACCATCCCCAGACAACGGACGCAACCGACCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041695_8

>merge|NZ_CP041695|8|5886885-5887004|CRISPRCasFinder
CGACCATCCCCAGACAACGGACGCAACCGACCCTGGTCCGGGCGACCGTGGGTCGAGTTCGCCCGTACCGCAACACAACACACCGATCGACCATCCCCAGACAACGGACGCAACCGACCC

>NZ_CP041695|8|8|5886885-5887004|CRISPRCasFinder
CGACCATCCCCAGACAACGGACGCAACCGACCC	TGGTCCGGGCGACCGTGGGTCGAGTTCGCCCGTACCGCAACACAACACACCGAT
CGACCATCCCCAGACAACGGACGCAACCGACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041695.1\|WP_029923711.1\|5888877_5889381_-\|DUF4254-domain-containing-protein	unknown	unknown	gnl\|CDD\|379447
NZ_CP041695.1\|WP_029923717.1\|5882611_5883025_-\|30S-ribosomal-protein-S11	unknown	unknown	gnl\|CDD\|180007
NZ_CP041695.1\|WP_029923718.1\|5881985_5882591_-\|30S-ribosomal-protein-S4	unknown	unknown	gnl\|CDD\|235411
NZ_CP041695.1\|WP_143982748.1\|5880262_5880772_-\|50S-ribosomal-protein-L17	unknown	unknown	gnl\|CDD\|235522
NZ_CP041695.1\|WP_143982755.1\|5900322_5902023_+\|type-VII-secretion-protein-EccE	unknown	unknown	gnl\|CDD\|274857
NZ_CP041695.1\|WP_143982752.1\|5895066_5896485_-\|type-VII-secretion-associated-serine-protease-mycosin	unknown	unknown	gnl\|CDD\|274856
NZ_CP041695.1\|WP_003886926.1\|5883838_5884060_-\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP041695.1\|WP_029923719.1\|5880826_5881885_-\|DNA-directed-RNA-polymerase-subunit-alpha	unknown	unknown	gnl\|CDD\|235359
NZ_CP041695.1\|WP_143982754.1\|5898107_5899943_+\|type-VII-secretion-AAA-ATPase-EccA	unknown	unknown	gnl\|CDD\|188437
NZ_CP041695.1\|WP_143982747.1\|5879338_5880205_-\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_CP041695.1\|WP_025347279.1\|5883628_5883742_-\|50S-ribosomal-protein-L36	unknown	unknown	gnl\|CDD\|179039
NZ_CP041695.1\|WP_143982757.1\|5902503_5904411_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP041695.1\|WP_143982753.1\|5896481_5897954_-\|type-VII-secretion-integral-membrane-protein-EccD	unknown	unknown	gnl\|CDD\|274855
NZ_CP041695.1\|WP_143982756.1\|5902044_5902455_-\|DUF3592-domain-containing-protein	unknown	unknown	gnl\|CDD\|378822
NZ_CP041695.1\|WP_029923716.1\|5883034_5883406_-\|30S-ribosomal-protein-S13	unknown	unknown	gnl\|CDD\|235358
NZ_CP041695.1\|WP_143982751.1\|5891023_5895049_-\|type-VII-secretion-protein-EccCa	unknown	unknown	gnl\|CDD\|274858
NZ_CP041695.1\|WP_051036894.1\|5889555_5890395_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP041695.1\|WP_143982750.1\|5890391_5891003_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP041695.1\|WP_143982749.1\|5884407_5884932_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143982746.1\|5878270_5879311_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|236612

Protein	Function_ID	Function_description	E-value
NZ_CP041695.1\|WP_029923711.1\|5888877_5889381_-\|DUF4254-domain-containing-protein	gnl\|CDD\|379447	pfam14063, DUF4254, Protein of unknown function (DUF4254). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 195 and 207 amino acids in length.	1.95896e-19
NZ_CP041695.1\|WP_029923717.1\|5882611_5883025_-\|30S-ribosomal-protein-S11	gnl\|CDD\|180007	PRK05309, PRK05309, 30S ribosomal protein S11; Validated.	4.51993e-88
NZ_CP041695.1\|WP_029923718.1\|5881985_5882591_-\|30S-ribosomal-protein-S4	gnl\|CDD\|235411	PRK05327, rpsD, 30S ribosomal protein S4; Validated.	2.50627e-117
NZ_CP041695.1\|WP_143982748.1\|5880262_5880772_-\|50S-ribosomal-protein-L17	gnl\|CDD\|235522	PRK05591, rplQ, 50S ribosomal protein L17; Validated.	6.39071e-60
NZ_CP041695.1\|WP_143982755.1\|5900322_5902023_+\|type-VII-secretion-protein-EccE	gnl\|CDD\|274857	TIGR03923, T7SS_EccE, type VII secretion protein EccE. This model represents the transmembrane protein EccB of the actinobacterial flavor of type VII secretion systems. Species such as Mycobacterium tuberculosis have several instances of this system per genome, designated EccE1, EccE2, etc. This model represents a conserved core region, and many members have 200 or more additional C-terminal residues. [Protein fate, Protein and peptide secretion and trafficking].	3.04155e-65
NZ_CP041695.1\|WP_143982752.1\|5895066_5896485_-\|type-VII-secretion-associated-serine-protease-mycosin	gnl\|CDD\|274856	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin. Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair].	1.36428e-124
NZ_CP041695.1\|WP_003886926.1\|5883838_5884060_-\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	4.3561e-46
NZ_CP041695.1\|WP_029923719.1\|5880826_5881885_-\|DNA-directed-RNA-polymerase-subunit-alpha	gnl\|CDD\|235359	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional.	0
NZ_CP041695.1\|WP_143982754.1\|5898107_5899943_+\|type-VII-secretion-AAA-ATPase-EccA	gnl\|CDD\|188437	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA. This model represents the AAA family ATPase, EccA, of the actinobacterial flavor of type VII secretion systems. Species such as Mycobacterium tuberculosis have several instances of this system per genome, designated EccA1, EccA2, etc. [Protein fate, Protein and peptide secretion and trafficking].	5.15754e-179
NZ_CP041695.1\|WP_143982747.1\|5879338_5880205_-\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	3.13385e-116
NZ_CP041695.1\|WP_025347279.1\|5883628_5883742_-\|50S-ribosomal-protein-L36	gnl\|CDD\|179039	PRK00465, rpmJ, 50S ribosomal protein L36; Reviewed.	1.1426e-12
NZ_CP041695.1\|WP_143982757.1\|5902503_5904411_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.26735e-77
NZ_CP041695.1\|WP_143982753.1\|5896481_5897954_-\|type-VII-secretion-integral-membrane-protein-EccD	gnl\|CDD\|274855	TIGR03920, T7SS_EccD, type VII secretion integral membrane protein EccD. Members of this family are EccD, a component of actinobacterial type VII secretion systems (T7SS) with ten to eleven predicted transmembrane helix regions. [Protein fate, Protein and peptide secretion and trafficking].	1.90742e-84
NZ_CP041695.1\|WP_143982756.1\|5902044_5902455_-\|DUF3592-domain-containing-protein	gnl\|CDD\|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	1.85399e-13
NZ_CP041695.1\|WP_029923716.1\|5883034_5883406_-\|30S-ribosomal-protein-S13	gnl\|CDD\|235358	PRK05179, rpsM, 30S ribosomal protein S13; Validated.	3.20167e-77
NZ_CP041695.1\|WP_143982751.1\|5891023_5895049_-\|type-VII-secretion-protein-EccCa	gnl\|CDD\|274858	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa. This model represents the N-terminal domain or EccCa subunit of the type VII secretion protein EccC as found in the Actinobacteria. Type VII secretion is defined more broadly as including secretion systems for ESAT-6-like proteins in the Firmicutes as well as in the Actinobacteria, but this family does not show close homologs in the Firmicutes. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP041695.1\|WP_143982746.1\|5878270_5879311_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|236612	PRK09685, PRK09685, DNA-binding transcriptional activator FeaR; Provisional.	1.26666e-19
NZ_CP041695.1\|WP_143982750.1\|5890391_5891003_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.9275e-08
NZ_CP041695.1\|WP_051036894.1\|5889555_5890395_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	3.20617e-35

>NZ_CP041695.1|WP_143982749.1|5884407_5884932_-|hypothetical-protein
MLWRSVVDGLRYPVVVGQGVVWSGAGVRLCGGAVLVRCGSFVALAVGVEAVGGGGEGVAGMVAGSLRCAAGEAGGGLRFGGVRVVGGRVLVPGGGRGDTDRLALGDGIGLGGVLVLAAFAAAEQAAAGGLLLGNEFVVREVLDGSLVADLGDFTLGEPRRQHREAVVVAAHMSP
>NZ_CP041695.1|WP_003886926.1|5883838_5884060_-|translation-initiation-factor-IF-1
MAKKDGAIEVEGRVIEPLPNAMFRIELENGHKVLAHISGKMRQHYIRILPEDRVVVELSPYDLSRGRIVYRYK
>NZ_CP041695.1|WP_025347279.1|5883628_5883742_-|50S-ribosomal-protein-L36
MKVQPSVKKICEKCKVIRRNGRVMVICDNLRHKQRQG
>NZ_CP041695.1|WP_029923716.1|5883034_5883406_-|30S-ribosomal-protein-S13
MARLMGVDLPREKRMEIALTYIFGIGRTRAKEILEATGVSADLRSKDLSDDDLTKLRDYIESQDFKVEGDLRREVQADIRRKIEIQCYQGIRHRRGLPVRGQRTKTNARTRKGPKKTVAGKKK
>NZ_CP041695.1|WP_029923717.1|5882611_5883025_-|30S-ribosomal-protein-S11
MPPKSRAAGPKKTQKSRRRDKKNVPHGNAHIKSTFNNTIVSITDPQGNVISWASSGHVGFKGSRKSTPFAAQLAAENAARKAQEHGVKKVDVFVKGPGSGRETAIRSLQAAGLEVGTISDVTPQPHNGCRPPKRRRV
>NZ_CP041695.1|WP_029923718.1|5881985_5882591_-|30S-ribosomal-protein-S4
MARYTGPITRKSRRLRVDLVGGDQAFERRPYPPGQHGRARIKESEYLMQLQEKQKARFSYGVMEKQFRRYYEEANRQKGKTGDNLLRLLESRLDNVVYRAGLARTRRQARQLVSHGHFTVNGVKVDVPSFQVSQYDIIDVKEKSAGYLPFQIARETYGERPVPGWLQVVPGRLRILVHQLPERAQIDVPLQEQLIVEFYSK
>NZ_CP041695.1|WP_029923719.1|5880826_5881885_-|DNA-directed-RNA-polymerase-subunit-alpha
MLISQRPTLTEEVVSENRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVLHEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYVRKQGPGTVTAGDIVPPAGVTVHNPDMHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEATRVEQRTDFDRLILDVETKNSISARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAEADHIASFGLPIEDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVKLHSLGLSLKDSPASFDPSSVVGYDAASGTWSDSGSFSDTDSGEQDYAETEQL
>NZ_CP041695.1|WP_143982748.1|5880262_5880772_-|50S-ribosomal-protein-L17
MPKPKKGARFGGSASHQKAIYANLATALFEHGRITTTEAKAKALRPYAEKLVTKAKAGTLADRREVMKVIRRKDIVHALFAEIGPSFDGREGGYTRIIKTVPRKGDNAPMAIIELVREKTVTNEADRARRVAASQKKVDEAKVEEAKAEEKADEAEAVAEAPAEEKKED
>NZ_CP041695.1|WP_143982747.1|5879338_5880205_-|tRNA-pseudouridine(38-40)-synthase-TruA
MSIQEVAVTVADSEPGAVRVRLDIGYDGTDFIGWARQPGLRTVQGVLEESLSKVLREPVQLTVAGRTDAGVHAEGQVAHFDTRAEVDGPRLVHRLARFLPKDVRVKAVSFPPAEFDARFSAVRRHYAYRLTTAPYGAEPLQARSVVACRSDVDLDAMRAASRELLGLHDFAAFCRRREGATTVRELQRFDWERAGDLLTAHVSADAFCWSMVRSLVGAVLAVGEGRRTPEWVAGLLLERERSSAVTVAPAHGLSLVAVDYPSAAELAARNAQTREVRTVPGAEGCCGS
>NZ_CP041695.1|WP_143982746.1|5878270_5879311_-|helix-turn-helix-domain-containing-protein
MRSSRVDLPCRHHRARSDRRRRERQTVTSWVPDIREVEIRSGAEVSSGEAFQRWEAHMSETYFPLAVSPTAPHHFHGWISHGRYGGVELSAVGSTPQRVRRTARAVADAEEEYLLAGIFVRGQGRLHQGDRVAELRPGMMVLYGSGERYHWEIEGRWEKAVVQVPLSRLREHSGITLDEVPTVVALPGNSATGVVARYFQGLAGIQRTDPDQAAVLAAPAMDMLVSAVTLAAGSERSTPDAFARERVLDYMRAHRTDPGLTVDRIAQGCLMSRRTLYRVFDEIEGGPAAVLRRMRVDYACELLTKSALPIAAVARASGFLTERHFYRAFRLEKGVTPAAFRVSDLA
>NZ_CP041695.1|WP_029923711.1|5888877_5889381_-|DUF4254-domain-containing-protein
MALPDVPGYSDAESQPLTAGLLPPSDLLLRACRGHRVIGGPLLWFAHDLAVLHEKRLVGRGGTGPDTDPTSIVENKRRRIELVMAIDDWVVRNLPQHRLGATLHTETVGSVIDRLAEASVRAHHALMTLDANDEILHSAWHHLAELSDAYDDLVRDVLAGRRRLPAW
>NZ_CP041695.1|WP_051036894.1|5889555_5890395_+|GntR-family-transcriptional-regulator
MADGPRYQRIADLLREEIRGGKWKPGDRLPSHNELAEQMQVSITTARNAIQVLVAENLVYTATSRGTIVRSQEVLESVVTNHIRPNRPRAAHDIFEEIARAAGREPSKQFTARMEPASAEVAHWLGIAKDSWVVARTVVQYLDNEPWSWEVSFYPRDLAEATGIDCPYDIPEGTTRRLADRGHAETAHRDSIVARPATSEEAAVLGVGPGTFLLDHLRIGANHDRVTRVTRHRSTAARNRLTYELGDDSGTEMIRRVLGVPSAPANSHSFGNSLLPGSP
>NZ_CP041695.1|WP_143982750.1|5890391_5891003_+|GNAT-family-N-acetyltransferase
MTLRIRPARLDDLGTICRLRLQRTVWLAARGSDQWTREGRGLPIETFAGSVAQAISNGETWMAEVDGERAGTITVNDRADEGLWSPGELADAVIVHYMIVDLRFAGQRVGEALLAHAARIARDRHRGWVRLDAWSANADLHAYYRRAGFHLARFAGPEATGPSGALFERRTESWAHRPVRSLADSMYPLLSTATPDQDAPAAR
>NZ_CP041695.1|WP_143982751.1|5891023_5895049_-|type-VII-secretion-protein-EccCa
MATEGFVRRPRIAPPRAPGGEMALTAPPEIPRAVPAPLITKIMPVVMVVAVIGMLVIFATMGRSILTNPMMMMFPMMMIMSMAGMMMGQRSGNKSAGELNEERKDYFRYLDQTRRDVRRTAAKQLDTLVWSHPAPDHLLSIIGTRRMWERRPNDPDFGHVRVGIGTHRLAAKLARPETGPLEDLEPVSTVALRRFVRTHSVVHHLPTAVSLRAFPAINIEGPEEDSRALVRAMLMELCAFHGPDHVAVAIVCSDPDSETWAWAKWLPHLQHRTERDGMGAVRMMYGSLGELETGLADDLLERGRFMRNPQPTQGRLHLVVVIDDGYVNGTERLVSESGLDSVTVIDLTAPENGLAVRRGLQLVATGGDILAKSAVGAEKFATADRVTLAEAESFARGLARYRLATAAQIVSLGDSSSTTADPGLMALLKIPDAAQIDPAKVWRPRAGRERLRVPIGITPDGAPVEIDIKESAENGMGPHGLCIGATGSGKSEFLRTLVLSLVATHSPDQLNLVLVDFKGGATFLGLDPLPHVAAVITNLEDEIELVDRMRDALAGEMNRRQELLREAGNFANVNDYEKARAAGVALDPLPALFIVVDEFSELLAQKPDFADLFVMIGRLGRSLHVHLLLASQRLEENKLRGLDSHLSYRIGLRTFSANESRAVLGITDAYHLPSVPGAGYLKSDASDPLRFNATYVSGPYVAPRATRQADGRAVIEAPPRVFTASPVEVLEAPEPENPLDPLDLLPPPPPAGDEGVPDSLLQVVVKRLTGHGRPAHEVWLPPLEESPTVDMLLPDPDWRSPVNRHGQLWMPIGIIDKPYEQRRDVLTVNLSGAQGHVAVVGGPQSGKSTTLRTIIMAAAATHTPEQVQFYCLDFGGGSMVGLNGLPHVGSIARAMDVDRVRRTVAEMTTLLRQREENFTQLGIESMADYRRRKDAAKAQGRTDDPILADRFGDVFLVIDNWMVIRDDFDSLVGQITALAQQGLSYGIHLILGANAWREIRANIKDQIGTRIELRLGDPSDSELGRRVAANVPQNRPGRGLTPDQLHMLIALPRLDSDTNAQTLAEGVSTSREQMAQLYGELRAPEVRMLPEHLPREQVLRLAQARGVEQSPTRVVVGIDEAELQPLALDFGSDPHFMAFADVESGKTTLLRALIRGIAENSTAETARIILIDYRRTLLGTLEGDQLAGYSTSSQTCGPMIKEVVGFMTKRIPGSDITPQQLRDRSWWSGPEIYVVIDDYDMVSTGGMQDPLAPLIELLPQARDIGLHIVVTRNTGGVSRALYGGLLGAMKNMSVPALIMSGPRDEGKIIGDIRPSKLPPGRGVLWTRSGQRMVQIIDLPPE
>NZ_CP041695.1|WP_143982752.1|5895066_5896485_-|type-VII-secretion-associated-serine-protease-mycosin
MSRWSGAWARTLCAASILGAALLGPSTPVAAAPVRTVNPPEIDLGRLGEAQALSGNPAPLQETEQHAVCAEPTLRGEAPRDEPLAQKVLDLPAAWQFSRGAGQKVAVIDTGVNPHPRLPALQAGGDYVSDSDGTVDCDGHGTLVAGIIAARPSPDDAFVGVAPEAEILTIRQLSLAYRAKDSRGNPQPGAIDSSGYGNMLTLAGAVVRAVDMGATVINISEVACVPAGSDTSDAPLGAAVRYAYDRNVVVVAAAGNLGSGCENQNEDTGWGQVRTVATPAWFSPYVLSVGSVDPNGDPSALTLYGPWVGAAAIGRNVVSLDSKPGGTGLVNAVQGQNGLQPIDGTSFAAPYVAGLAALVRARFPELSAQQVMDRITRTAHGPGPGRDDRIGAGLIDPLAALTAQLPAEPVSVGADQPRAFPEPGRPQGPDSLPRLVATVGSIVCLAALAIGLAISIPFRRARRDDELPDLDS
>NZ_CP041695.1|WP_143982753.1|5896481_5897954_-|type-VII-secretion-integral-membrane-protein-EccD
MTAQSTSGVRATEPELCRVSVIGGNTQLDVGLPANVPIAAFMGDLVQLIQSRNPDPVEKEDSNPGQVENWTLAKLGRDMIPPNQTLNDAEIHDGELLVLRSVAAKESPALFDDVIDAVSRLTADDFRGWSAASARWTGLVVGVLATVLALLLGADARGHGDTFVAPAMLLGAAIAALVAAVIAARKYGDELTATVLMLCMLLLVFGGAGLAVPGAIGSPHALLGGSATLLFAVVGYRLIGVGAAIVSAVVTLVVFAGVAAAVHMIWDTDLPKLAAGILVSSMILLSMVPRLAALLARLPVPPVPTAGAAIDPADHEPRPNIEGIGAIGATVLPSAQGLGQRARAANQFQTGIVLGATLGAAFGAIGAADVFGQARWQGITLAVVVSVILCLRGRSFADLAQAAILIAGGCLTFTTLLVALAMDDPDRLLLSAALLLAFAVGAIGFGVIGPHIEVTPVTRRRNELFEYALIVSIVPLVLWIMDVYSMARNR
>NZ_CP041695.1|WP_143982754.1|5898107_5899943_+|type-VII-secretion-AAA-ATPase-EccA
MIDTRQAQRAFDAGVLSLGLSIDGQESTRDLEYAKLAFQRATEWDPTMCDAWLGRAAAGEVTKDVLYNLHKTSTTTLYREQRRLGLPPRMFAGRFLPGLYIDYPLASFTEIWLAYAAQLISEKQYDEAERILDDLEKHRRERTSDPDREIDNRIAAYVRAVLHYNTQRWPDVMTILAGSAEWEDPYIAAGAHVMVGTACAQLGLFGEAVQRMEKAEAGPIPAARTAAMFCRGLCLREMGKADEAQSLFEKVYSQAPDFDANTAAMRDRTYRITVTNKEVIEARTDKWDPASAPSLEEKAKAEFADRAKKILDEARAELDKQIGLAAVKTQVAKLQSSAQLAKIRAEKGLSSSARGQHLAFTGPPGTGKTTIARVVAKIYCGLGILKTDKVVEAKRSDFVGQHLGSTAIKSEALIDSALDGVLFIDEAYTLIQTGLSGGDAFGREAVDTLLARMENDRDRLVVIIAGYDGEIDRFLAANDGLASRFAKRLQFPSYTAPELGQIGQVIAGKRDSELSEGALELLVQTCQRLYEMESTDQSGQPRRGVDLAGNGRFIRNLIEAAEEEREFRLANDDSLDLSAVDETVLMRIEAPDMKAALTTVLTSLGLASATA
>NZ_CP041695.1|WP_143982755.1|5900322_5902023_+|type-VII-secretion-protein-EccE
MWLFRNLPLRLVIPVALLAVAASLIAIAFDAPWWGTAIATAVPALIGLAPVGGTPLGLRLGSWVAYRWRQSRRRATEDEESLTDLPLPEGGSYGMRWDGTLVTTMLRIDPPPDTLTLLRRGSLSTDQVLPLTEIADCLRQYDVELDSADVVSTGTRTAGTDAVLSGYAASVAHLGRMYDEILGPLPAIAHRTVWIMLRFNPLANAKAVQNRGGGSEGALRSAITATRRVANRLAARGITASVLTSSEMTAAIREITRGIPVGEFTETPKSLAHDGIHLTTYRIGRDLFTSDGLAKIWAVRSLATTVTVRLRPVTDPTARPGTKATTIEVDARVRYDTRHEPEVPPVDGLHELPRRQLWALVDTLAFDSQNAREKGYRGPVTALSGIAIPTAGCGQLIGADASGSGVAVPLIGSGSRRIDIIASLHLAQQTILRAIALGAGAVVHTSRPAAWQGMIANVAAPHALSLASSVTHSTRHQIMNPNAPHPAATVIVFDGVPASTPPGSASVITVLDRIPEHYQPNADVTIVQHPNEPQTVTVHTPATRTTAQLVTTPTEQQLIGAMPVRR
>NZ_CP041695.1|WP_143982756.1|5902044_5902455_-|DUF3592-domain-containing-protein
MSKDWLFALIPLGLGSVFFAVGVNFVLRTRALRRNGAKAYGEVVRLATSSGNNGTLYHPVVRWVAADGRVVERAAPIGKTWIVNFRPGRQVLVHYNPADPDRMAIDGYSGGSEWLFCLLGALLIIGTAAVFVVFGL
>NZ_CP041695.1|WP_143982757.1|5902503_5904411_-|protein-kinase
MKIQPLQADDPQHVGRYRVLGELGAGGMGRVLLGVGADGRLVAIKQVHPHLLDEAEYRARFRREVAATTRVSGAFTAPVIDFDIDSGVPWLASVFVIGMPLDKAVSQYGPLPPSAVRRLAVGLAAALHAIHQAGLVHRDLKPANVLLADDGPRVIDFGIASMSENPGGLTETGSVLGSPAYMSPEQTLAQRLTSASDVFSLGSVLMAAATGSSPFEAASLAYTLFNIAHTQPDLEALPSELRDLIEPCLRKDPAARPTPAQILDYLGQPVQHELPWPEPVHHEIERQRTELAALAADPDATSVLPGVRRVRDRREQPHPTRRRSGRVGTAIAVAVVLAVAMAVTATAAWVRSGDTAPQPAARELTLPQVREADTCSWLKEALGASVPVDLAQNVPAEVSAWQLVPFSQWSCHSAVRLGDRQLIFSAGDIVHRSERTAVEVPAGSFAAGQPIVGDSDGYGCERSVRVSDSTTWGLTVSGGAESCDLLEHILLRVLAVEEVPRLADVAGSLASVDPCGLADPASLLPLIGPVPDIPSVASARSCEWQGSESVAITTSRSTDLDDAPVIELGDGRQLLAPTSTVDAICDRKYVFRQDGADSEVVNVRVHGGAGMNEQICATAESVARTAIDRLPRQPG

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Crispr_ID: NZ_CP041695_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041695_9

6569494-6569649

Unclear

Consensus_repeat	Method
CTTCTTGGCGGCGGTCTTCTTCGC	CRISPRCasFinder

3 spacers

cas3

The CRISPR arrays of NZ_CP041695_9

>merge|NZ_CP041695|9|6569494-6569649|CRISPRCasFinder
CTTCGTGGCAGCCGTCGCCTTCTTCGCCGGAGCCTTCTTGGCGGCGGTCTTCTTCGCGGCCGTCTTCTTGGCCGCCGCGCCCTCGCCCGTCGTGCCCGCGGCCTTCTTCGCTGTGGTCTTCTTGGCGGTGGTCTTCTTCGCCGCGGCCTTCTTGGC

>NZ_CP041695|9|9|6569494-6569649|CRISPRCasFinder
CTTCGTGGCAGCCGTCGCCTTCTT	CGCCGGAGCCTTCTTGGCGGCGGT
CTTCTTCGCGGCCGTCTTCTTGGC	CGCCGCGCCCTCGCC
CGTCGTGCCCGCGGCCTTCTTCGC	TGTGGTCTTCTTGGCGGTGGT
CTTCTTCGCCGCGGCCTTCTTGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041695.1\|WP_143983143.1\|6576860_6577076_-\|DUF4244-domain-containing-protein	unknown	unknown	gnl\|CDD\|379429
NZ_CP041695.1\|WP_143983140.1\|6573307_6575689_+\|DEAD/DEAH-box-helicase	cas3	mkCas0139_cas3_CAS-I	gnl\|CDD\|274800
NZ_CP041695.1\|WP_143983132.1\|6563050_6563428_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143983144.1\|6577133_6577730_-\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|366122
NZ_CP041695.1\|WP_143983141.1\|6576103_6576481_-\|flp-pilus-assembly-TadE/G-like-family-protein	unknown	unknown	gnl\|CDD\|274799
NZ_CP041695.1\|WP_143983138.1\|6567616_6568828_-\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|236134
NZ_CP041695.1\|WP_029925108.1\|6572668_6572872_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP041695.1\|WP_143983148.1\|6581311_6582229_+\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|273654
NZ_CP041695.1\|WP_143983131.1\|6562657_6563044_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143983137.1\|6566078_6567398_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP041695.1\|WP_143983147.1\|6579833_6581069_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274798
NZ_CP041695.1\|WP_143983145.1\|6577755_6578568_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227300
NZ_CP041695.1\|WP_143983142.1\|6576477_6576795_-\|pilus-assembly-protein-TadE	unknown	unknown	unknown
NZ_CP041695.1\|WP_143983146.1\|6578649_6579837_-\|TadA-family-conjugal-transfer-associated-ATPase	unknown	unknown	gnl\|CDD\|200328
NZ_CP041695.1\|WP_143983136.1\|6565842_6566076_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143983133.1\|6563434_6564418_+\|toprim-domain-containing-protein	unknown	unknown	gnl\|CDD\|235927
NZ_CP041695.1\|WP_143983135.1\|6564863_6565820_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143983130.1\|6562231_6562654_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143983139.1\|6568886_6569390_-\|DUF664-domain-containing-protein	unknown	unknown	gnl\|CDD\|368218
NZ_CP041695.1\|WP_143983134.1\|6564456_6564867_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP041695.1\|WP_143983144.1\|6577133_6577730_-\|type-II-secretion-system-F-family-protein	gnl\|CDD\|366122	pfam00482, T2SSF, Type II secretion system (T2SS), protein F. The original family covered both the regions found by the current model. The splitting of the family has allowed the related FlaJ_arch (archaeal FlaJ family) to be merged with it. Proteins with this domain in form a platform for the machiney of the Type II secretion system, as well as the Type 4 pili and the archaeal flagella. This domain seems to show some similarity to PF00664 but this may just be due to similarities in the TM helices (personal obs: C Yeats).	1.21866e-09
NZ_CP041695.1\|WP_143983140.1\|6573307_6575689_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|274800	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase. A conserved gene neighborhood widely spread in the Actinobacteria contains this uncharacterized DEAH-box family helicase encoded convergently towards an operon of genes for protein homologous to type II secretion and pilus formation proteins. The context suggests that this helicase may play a role in conjugal transfer of DNA.	0
NZ_CP041695.1\|WP_143983143.1\|6576860_6577076_-\|DUF4244-domain-containing-protein	gnl\|CDD\|379429	pfam14029, DUF4244, Protein of unknown function (DUF4244). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 66 and 95 amino acids in length. There is a conserved EYA sequence motif.	1.61483e-15
NZ_CP041695.1\|WP_143983148.1\|6581311_6582229_+\|HAD-IB-family-hydrolase	gnl\|CDD\|273654	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled here are all bacterial. The IB subfamily includes the enzyme phosphoserine phosphatase (TIGR00338). Due to this relationship, several of these sequences have been annotated as "phosphoserine phosphatase related proteins," or "Phosphoserine phosphatase-family enzymes." There is presently no evidence that any of the enzymes in this model possess PSPase activity. OMNI\|NTL01ML1250 is annotated as a "possible transferase," however this is due to the C-terminal domain found on this sequence which is homologous to a group of glycerol-phosphate acyltransferases (between trusted and noise to TIGR00530). A subset of these sequences including OMNI\|CC1962, the Caulobacter crescentus CicA protein cluster together and may represent a separate equivalog. [Unknown function, Enzymes of unknown specificity].	1.81746e-72
NZ_CP041695.1\|WP_143983138.1\|6567616_6568828_-\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|236134	PRK07940, PRK07940, DNA polymerase III subunit delta'; Validated.	0
NZ_CP041695.1\|WP_029925108.1\|6572668_6572872_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	4.93346e-37
NZ_CP041695.1\|WP_143983141.1\|6576103_6576481_-\|flp-pilus-assembly-TadE/G-like-family-protein	gnl\|CDD\|274799	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein. Members of this small, highly hydrophobic protein family occur in a pilus/secretion-like region that usually is next to an uncharacterized DEAH-box helicase, in Actinobacteria. Members show sequence similarity to the TadE-like family described by pfam07811. The function is unknown. [Unknown function, General].	1.4205e-16
NZ_CP041695.1\|WP_143983137.1\|6566078_6567398_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	8.25958e-21
NZ_CP041695.1\|WP_143983145.1\|6577755_6578568_-\|hypothetical-protein	gnl\|CDD\|227300	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion].	8.1946e-26
NZ_CP041695.1\|WP_143983147.1\|6579833_6581069_-\|hypothetical-protein	gnl\|CDD\|274798	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see ). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.	1.29459e-80
NZ_CP041695.1\|WP_143983133.1\|6563434_6564418_+\|toprim-domain-containing-protein	gnl\|CDD\|235927	PRK07078, PRK07078, hypothetical protein; Validated.	7.58252e-12
NZ_CP041695.1\|WP_143983139.1\|6568886_6569390_-\|DUF664-domain-containing-protein	gnl\|CDD\|368218	pfam04978, DUF664, Protein of unknown function (DUF664). This family is commonly found in Streptomyces coelicolor and is of unknown function. These proteins contain several conserved histidines at their N-terminus that may form a metal binding site.	4.10098e-36
NZ_CP041695.1\|WP_143983146.1\|6578649_6579837_-\|TadA-family-conjugal-transfer-associated-ATPase	gnl\|CDD\|200328	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase. Members of this protein family comprise a distinct clade of putative ATPase associated with an integral membrane complex likely to act in pilus formation, secretion, or conjugal transfer. The association of most members with a nearby gene for a DEAH-box helicase suggests a role in conjugal transfer.	9.48016e-172

>NZ_CP041695.1|WP_143983139.1|6568886_6569390_-|DUF664-domain-containing-protein
MTVDREREDLIANLAEQRRLFGITLRGIDDDQARQRTTVSELTLGGLLHHLVDTERHWVTVAVERDENAKFDLSDMDSRYRLGPDETVAGLLAEWDVVAQRTEKLIREVDSFDTPIPIPTAPWAPEREYWPVRNILFNIFREIAQHSGHADIIREALDGANTTYQRV
>NZ_CP041695.1|WP_143983138.1|6567616_6568828_-|DNA-polymerase-III-subunit-delta'
MAGVFDRLVGQDAVESELTAAAVAARNGTGSSSAMTHSWLFTGPPGSGRSVAALAFAAALQCTDPERPGCGKCHACTTTMAGTHGDVRRVVPEGLSIGTKEMRAIVQVASRRPSTGRWQVVVVEDADRLTEAAGNVLLKVVEEPPERTVFLLCAPSVDPEDISVTLRSRCRHVHLVTPSVDAIARVLVERDGLDAKTAGWAASISGGHVGRARRLATDDEARGRRKRALALVGATARPGAAYAAADALVKSADEEAKQVSAERDGKEREELATAMGAGGTGKGTASATRGSAGALKDLERRQKSRATRTGRDALDRALIDVAGLYRDALAVRLRATTPDAQGVALTHPDMSDQIRELATEVRPEGLLRSIQAVLECREALDTNVKPRFAVAAMVATLIAARST
>NZ_CP041695.1|WP_143983137.1|6566078_6567398_+|tyrosine-type-recombinase/integrase
MPRGRPPRPIGVPGAVMLTELAPGHFEARVLVRDGSGKRREVTRRSPLRLDTRGRKVPDRNGSRASEAVLAAAREIRVAVQGELTDSISVRKLWEFYRNHLVALERAASTLDRYDDVATMFNRAFGDLRLHEVTTAAAEKFLIEVGKTQGPGSMDTARSVLSGMFKYAVRKTPLAVNPVREVELPENLEPKGRAGGARDITIDELRFILAAVRTSILPCPRRLMKKERERPTPIRSYAPPTVADFCTSADLTDWVTLLAGTGLRRSQILALLWSDIDFESKTLRTSGKVVRITNVGLVRQEIENDPKNRKGRIALPDFAVVMLTQRKAMLENRKKAHPPAKPPEYDLVFPSENWTLRDPNNVQHQWQRVRDALGIPDDITAHSFRGAVATILDDAGLSARVTADVLGHADPSMTQRRYMARGRVHPAAAEALHKAVHVE
>NZ_CP041695.1|WP_143983136.1|6565842_6566076_+|hypothetical-protein
MTTATNSSGQAHTRRWASTKDAAAHIHRHPEVLRRWHRQRAEHPWLPLPRRVGKNLLWDLDELDAAIDAQVDRDEGQ
>NZ_CP041695.1|WP_143983135.1|6564863_6565820_+|hypothetical-protein
MTGNGAGSLVVHGNDAVHHSRPPADTPDTDTAAPPDAVADPTPPRRQRRLTRQETRHPHAPTGGRTVAWLGFGFGAVLSVMANWLYTWLPADTQPDGWSPGIAPQIGSAVWPIVLMLSVEVLLRVRWLPGLWWKLARYAGAGTVALGSAIISYGHVYHVLLSWGYDSVGARVGPLAIDGFMVICGFALLSESTPAQPDPDPADTAGDTRDTTSAVVDTPPDTRDSVPDAVGITGDTTADAKATVGDKSADSDRDNSIRAMYRTVRSTRIVADAFGLHHSTVAKIVAQPDSTDTTPGETNSGDTTEPGQAMAGSNSLHH
>NZ_CP041695.1|WP_143983134.1|6564456_6564867_+|hypothetical-protein
MTGIDYGQRFKAAAAKPPSAFGKNATPGTTVYGRITEIGEQPRLKFNGAPGEVQKDKQGNPVMQLYITLDTPAGLRNLYPTPRMERAIGTALSKAGAEFQIGATLSVTYTGTDPADDRARLYTAAYTPTTAGGGEA
>NZ_CP041695.1|WP_143983133.1|6563434_6564418_+|toprim-domain-containing-protein
MEPQPTHGRSWELITSALTAQMGPGRAGPKWTNYYCPVHENDGQHHNPSLGVRYDPAQGKTILRCWAGCDDQDVLSRLNLRVRDMWDQLPQRDPHRRNQPPTPRPRPQGAGMSLVDKAIDYAQFPPPHKPQLGEAVGPVETVCTYVYRWPDGRVEGAVARQRTPHQRGYSKGFWQARWTGNQWEHTGFAPIPYRLPELVDAVAAGREIYVCEGEKDVVRAFDTGQIATCNAMGAGSWTPEHARWLHGAGRVIVVADRDRPGYRHAARVAETLHGHVGEIRVLQAAAGKDLSDHLDAGHGIDALERVPYLDRHYRQPPQRTRAITRSR
>NZ_CP041695.1|WP_143983132.1|6563050_6563428_+|hypothetical-protein
MEREYEEAMRTEFAAQAERWRTAYEPDVTEAKLDEIYRTANECDQRWQTGPHAEHWQYLTDAYSDWRARPDTMNRLLDDVEHNRAQGWDTGVTDIQRRSLHQARDLAHWERSQQRTHRPGIERGR
>NZ_CP041695.1|WP_143983131.1|6562657_6563044_+|hypothetical-protein
MHHEHEEAMRAEFSDCIALSWHTMRHSTTIDTDEIHARVNEYDQRWQSGPHAREWNFLCAAYTDWRDYPEDTAKLVADIDAHRDVYHGAGFTDIQRRSLDQARNIANEERSAIRAHSPSQQLPVQRER
>NZ_CP041695.1|WP_143983130.1|6562231_6562654_+|hypothetical-protein
MNVESTDPVQPQYYLDRGAFALEAEMRADYAVVRNARKIAARVQFDSHRAELLAAADRIARRWASPAGVTGPWEQLDNAVSRWERTPQLMHRLHDQVTEGGREPGMLPIDWRTCQQARELTGNGTWPPTTLLRHRIERNR
>NZ_CP041695.1|WP_029925108.1|6572668_6572872_-|cold-shock-protein
MAQGTVKWFNAEKGFGFIAPEDGSADVFVHYSEIQGSGFRTLEENQKVEFEVGQGTKGPQATGVRAL
>NZ_CP041695.1|WP_143983140.1|6573307_6575689_+|DEAD/DEAH-box-helicase
MKPAARAVHIDGTSYGRSLLNRVLIGFENGDARLTHISELPSRAAQVTEWPQWSSPDVVEALQASGVDTPWTHQADTAELAFSGRNVVVSTGTASGKSVGYQLPVLTTLHADPKATALYLSPTKALGADQLRCATELTDGPLRHIHPAAYDGDTPGEIRQWVRAHSRWVFTNPDMLHLGILRGHQRWARLLRNLRYVVIDECHTYRGVFGSHVALVLRRLRRLAQRYGSDPVFILCSATAAEPAATAARLIGAPCAAVTADGSPQGARTVALWEPPLIEGVTGENGAAVRRSAGAEAARVMAELVAEGASTLAFVRSRRSAELVAMDTRHLLSEVDPQLTSRVAAYRAGYLAEDRRALEAALSDGSLLGVATTNALELGVDIAGLDAVVVTGYPGTVASFWQQAGRAGRRTQGALVLLIARDDPLDTYLVHHPEALLGKPIEATITDPHNPYVLGPHLLCAAMEQPLSDAEVHAFGAWELLSDLAEQGLIRRRARAARDGGARWFVTADAHPHDAVDVRGGIGTTVAVVDGESGRLLGTTDAGRAPATLHEGAVHLHQGESYVVDELDLDGGVALVHAETPSWTTSARAVTTVEVEAVDDQRIHGAVTTALARVLVTRQVVGYLRRLPSGEVLDMVPLDMPAQPLPTRAVLYTVTPELLEHAGIDAGRVAGALHAAEHAAIGMLPLVATCDRWDIGGVSTAEHPDTGLPTVFVYDGHPGGAGFAERGFARLRYWLTATLEVIRSCGCANGCPSCVQSPKCGNGNNPLDKAGAERLLAAVLAQLRDGDDGHAES
>NZ_CP041695.1|WP_143983141.1|6576103_6576481_-|flp-pilus-assembly-TadE/G-like-family-protein
MSDVSPARLRADAGSATVTAAWALAALLTVTLLLAQLGVAVVARHEAQSAADLAALAAAGGLDRGTDAGCAEANRVGQRMGVRIRGCVVAGWDVTVTVESGITLGPLGTRMVRASARAGPVVGPG
>NZ_CP041695.1|WP_143983142.1|6576477_6576795_-|pilus-assembly-protein-TadE
MATVEAALALATILLGMALCIGALLAASAQVRCVDAAREAARLTARGAQSEAVPTAGRVAPPGADITVRADADLVVATVTARLPLLPGLELRATAVAVSEPGVRS
>NZ_CP041695.1|WP_143983143.1|6576860_6577076_-|DUF4244-domain-containing-protein
MRSTVRNMTLRLRTRLLLAATAENGMSTAEYAIGTIAAAAFGAVLYAVVTGDSIVNALTRIIDKALKTSVG
>NZ_CP041695.1|WP_143983144.1|6577133_6577730_-|type-II-secretion-system-F-family-protein
MSAYSTPLLLVAVALVLLPGRDVGRRRLGGLVDRRRPDRGTAVRARPDPLGVAAALDLFAACLRAGLPTAAAADAVAVSAPEPVRTVLRRAADLLALGADPAVAWERAGAGVCDAAVTALTRLARRSARSGASLAVAVGELAQQRRGEVEDAAAARAERAGVLISGPLGLCFLPAFVCLGIVPVVIGLAGRVMAGGLL
>NZ_CP041695.1|WP_143983145.1|6577755_6578568_-|hypothetical-protein
MRELLAYPSPALACLALALVTLPPPPARRRCAALFGPPVPKRKALSPFVLRVVVPLIPLSLWLVGFGTMLAAAVLAATFAVRHHRRRHARRHAAELAHLLDGLEVIIGELRVGAHPSAAAEIAARETAGDASHAFAVSAARSRLGGSGASGLRHPNSAITHDLSRVADAWQVAESHGLALAELLTAARTDLLGRKRFQARTRAALAGAHATAAVLSALPLLGLALGHLMGAAPLHILLTTPPGQLLLPLGTTLTCTGLLWTDAITRKVLR
>NZ_CP041695.1|WP_143983146.1|6578649_6579837_-|TadA-family-conjugal-transfer-associated-ATPase
MSALVTAELLERVRERLADGVGDPDPAQVAAAVRAEAGGVLGDTDLLRALRLLQTELTGAGVLEPLLHDPEVADVLVTGPDAVWVDRGQGLRRTSVRFPDEAAVRRLAQRLALSAGRRLDDAQPWVDGRLAGSETAVGNSFGVRLHAVLAPIAHGGTCLSLRILRPATQGLDALAAAGAVPPDAKRLLENIIRARLAFLVVGGTGAGKTTLLSGLLAKVDAAERIVCVEDAAELAPPHPHVVRLVARTPNVEGVGEVTVRDLVRQALRMRPDRIVVGEVRGAEVVDLLTALNTGHDGGAGTVHANSPGEVPARLEALAALGGMDRLALHSQLAAAIQVVLHVHRRPDGSRALREIGVVTRTPSGTVHIEPAWTATTRPAPAAPILTRLIDERLDR
>NZ_CP041695.1|WP_143983147.1|6579833_6581069_-|hypothetical-protein
MNPVVAAAPALMLVDRPGLRAEIRRIAAAADRRVDERALPVGRHDWMGASVVLLDTAAARECAAARCPRRPGVLLVTEDEPGLPDWQTATAVGAEQVLALPDAAEALIAAFAANAHGGGGRGVVVAVAGACGGAGASTLAAAIALTAARRRFRPRTLLLDAAPFGGGLDLLLGLEQAPGPRWPDLAVEHGRVAADALHAALPGVGGITVLACTRDGSAPAPPPTAVRAVLDAVRGAGDLLVCDLSTERGAHADQLLDSADLVVLIAPAQLRAVAAAEPTTARLRTRNPNLALLVRGPAPGGLRPADIATALDLPLLHTMRALPALSHQLERGGLPLHARHPLHRAATAVLGVLTSTGAPPRSGCAAPREPIRHTFAAQQPKPPATAVDPVAPHDVPAGPAVTPLIPEPGRR
>NZ_CP041695.1|WP_143983148.1|6581311_6582229_+|HAD-IB-family-hydrolase
MQVRRASRFPNRTCRLPAGKPVRTDRPPPHRPGKPILDGVTAERGRVAAFFDLDKTVIARSSAFVFSKPFLDQGLLSRRAVLESSYAHFLFLLSGADHDQMERMRAHLTSMCAGWDVEQVKGIVAETLHEIVDPLIYAEAADLIADHRIRGHDVIVVSASGEEIVAPIAAALGADHVAATRMVVENGKYTGEVEFYCYGEGKVQAIEKLSASEGYDLSRCYAYSDSVTDLPMLAAVGHPTVVNPDRALRREAHQRGWPVLTFENPVSLWSRIPAPSTTTVAASVAVGLGAVAAGALSYRLLRKRR

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Crispr_ID: NZ_CP041695_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041695_10

6648496-6648581

Orphan

Consensus_repeat	Method
GACCCGTCCACGAGGGGTGTCGGGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041695_10

>merge|NZ_CP041695|10|6648496-6648581|CRISPRCasFinder
GACCCGTCCACGAGGGGTGTCGGGTCGTGCCCGGGCGACACGAACCACCACCGTCGAGCGGACCCGTCCACGAGGGGTGTCGGGTC

>NZ_CP041695|10|10|6648496-6648581|CRISPRCasFinder
GACCCGTCCACGAGGGGTGTCGGGTC	GTGCCCGGGCGACACGAACCACCACCGTCGAGCG
GACCCGTCCACGAGGGGTGTCGGGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041695.1\|WP_143983186.1\|6641965_6643198_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP041695.1\|WP_143983193.1\|6652864_6653446_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP041695.1\|WP_143984396.1\|6650951_6651923_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|270703
NZ_CP041695.1\|WP_143983192.1\|6651860_6652379_-\|DUF1772-domain-containing-protein	unknown	unknown	gnl\|CDD\|378020
NZ_CP041695.1\|WP_029932806.1\|6657531_6657951_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_CP041695.1\|WP_143983190.1\|6649040_6649658_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379883
NZ_CP041695.1\|WP_143983195.1\|6655227_6655959_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367243
NZ_CP041695.1\|WP_143983182.1\|6637368_6637770_+\|glyoxalase	unknown	unknown	gnl\|CDD\|319901
NZ_CP041695.1\|WP_143983187.1\|6643525_6645169_+\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|235000
NZ_CP041695.1\|WP_143983185.1\|6640011_6641367_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP041695.1\|WP_143983183.1\|6637748_6638492_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225117
NZ_CP041695.1\|WP_143983196.1\|6656025_6657489_-\|catalase	unknown	unknown	gnl\|CDD\|163712
NZ_CP041695.1\|WP_143983194.1\|6653504_6655070_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|184957
NZ_CP041695.1\|WP_029932793.1\|6639329_6639893_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP041695.1\|WP_143983184.1\|6638531_6639191_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379276
NZ_CP041695.1\|WP_143983189.1\|6646304_6648194_-\|PKD-domain-containing-protein	unknown	unknown	gnl\|CDD\|214510
NZ_CP041695.1\|WP_143983188.1\|6645295_6646318_+\|TIGR03617-family-F420-dependent-LLM-class-oxidoreductase	unknown	unknown	gnl\|CDD\|132656
NZ_CP041695.1\|WP_029932795.1\|6641430_6641919_-\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|223463
NZ_CP041695.1\|WP_143983197.1\|6658391_6659633_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP041695.1\|WP_143983191.1\|6649780_6650893_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP041695.1\|WP_143983186.1\|6641965_6643198_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	8.8598e-87
NZ_CP041695.1\|WP_143983193.1\|6652864_6653446_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	8.31194e-09
NZ_CP041695.1\|WP_143984396.1\|6650951_6651923_+\|phosphotransferase	gnl\|CDD\|270703	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins. This subfamily is composed of the N-terminal domains of vertebrate ACAD10 and ACAD11, and similar uncharacterized bacterial and eukaryotic proteins. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 are both significantly expressed in human brain tissues. They contain a long N-terminal domain with similarity to phosphotransferases with a Protein Kinase fold, which is absent in other ACADs. They may exhibit multiple functions in acyl-CoA oxidation pathways. ACAD11 utilizes substrates with carbon chain lengths of 20 to 26, with optimal activity towards C22CoA. ACAD10 may be associated with an increased risk in type II diabetes. The ACAD10/11-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	6.55472e-74
NZ_CP041695.1\|WP_143983192.1\|6651860_6652379_-\|DUF1772-domain-containing-protein	gnl\|CDD\|378020	pfam08592, DUF1772, Domain of unknown function (DUF1772). This domain is of unknown function.	9.58188e-09
NZ_CP041695.1\|WP_029932806.1\|6657531_6657951_-\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	2.14532e-34
NZ_CP041695.1\|WP_143983190.1\|6649040_6649658_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	8.30195e-16
NZ_CP041695.1\|WP_143983195.1\|6655227_6655959_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|367243	pfam02909, TetR_C, Tetracyclin repressor, C-terminal all-alpha domain.	1.72779e-14
NZ_CP041695.1\|WP_143983182.1\|6637368_6637770_+\|glyoxalase	gnl\|CDD\|319901	cd07235, MRD, Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.	3.80158e-52
NZ_CP041695.1\|WP_143983187.1\|6643525_6645169_+\|FAD-binding-protein	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	7.95794e-175
NZ_CP041695.1\|WP_143983185.1\|6640011_6641367_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	3.76525e-68
NZ_CP041695.1\|WP_143983183.1\|6637748_6638492_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	2.04546e-12
NZ_CP041695.1\|WP_143983196.1\|6656025_6657489_-\|catalase	gnl\|CDD\|163712	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 3 catalases are the most abundant subfamily and are found in all three kingdoms of life; they have a relatively small subunit size of 43 to 75 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. Clade 3 catalases also bind NADPH as a second redox-active cofactor. They form tetramers, and in eukaryotic cells, catalases are located in peroxisomes.	0
NZ_CP041695.1\|WP_143983194.1\|6653504_6655070_-\|MFS-transporter	gnl\|CDD\|184957	PRK14995, PRK14995, SmvA family efflux MFS transporter.	4.10767e-74
NZ_CP041695.1\|WP_029932793.1\|6639329_6639893_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	3.8295e-10
NZ_CP041695.1\|WP_143983184.1\|6638531_6639191_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379276	pfam13578, Methyltransf_24, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.46435e-20
NZ_CP041695.1\|WP_143983189.1\|6646304_6648194_-\|PKD-domain-containing-protein	gnl\|CDD\|214510	smart00089, PKD, Repeats in polycystic kidney disease 1 (PKD1) and other proteins. Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.	1.64265e-10
NZ_CP041695.1\|WP_143983188.1\|6645295_6646318_+\|TIGR03617-family-F420-dependent-LLM-class-oxidoreductase	gnl\|CDD\|132656	TIGR03617, F420_MSMEG_2256, probable F420-dependent oxidoreductase, MSMEG_2256 family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes one such subfamily, exemplified by MSMEG_2256 from Mycobacterium smegmatis. [Unknown function, Enzymes of unknown specificity].	4.84699e-145
NZ_CP041695.1\|WP_029932795.1\|6641430_6641919_-\|glutathione-peroxidase	gnl\|CDD\|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	4.27958e-80
NZ_CP041695.1\|WP_143983197.1\|6658391_6659633_+\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.1403e-47

>NZ_CP041695.1|WP_143983189.1|6646304_6648194_-|PKD-domain-containing-protein
MQVDPIGTRRVGVACKTPISAGRGVSSFSARRVSIGSELVARWRNRIGYGARRIRSENFLFQHRRHFTCRRCAFVCALEEELLNVWRSRWWHPVLPLAVPVLAVAAGSVPAQAEVITDYPVVIDVSATPGGLCDGPLQGTTSVWYPPGIPLRADIEWRMRAGDRLLRSGTARVDGEVLTIPFEIARHEVPASGPLRVDARAHLPGGAVTEFGTPWPLYPARECDALHVVSVGDAVMWGQVLDLEHKFAHLTAETLGARTGRAVELHDYSVSGAVLDAPTVPAGNDDAGCLEQHYAREVYGTVAMESVPLDERLPDVFCQLERAASEAEAGGYRVDLVLVNGCVNDLDPFFGIPLGVTPGSADLVSAVRRECGGEGADPVNPAADVPYYSGAKLGYGGRGMRAALERAHDLPGAPKVLVSNYFHGFDAELLPDGLPRWSEFVRLSAAAFGQAAHEANAAAGVDFAVAADGLVARDGVPGATSRLSLNPFGDESVTLRALTCPETDHEAPQCRIPVLGRPDVDGARRYAEAFLLHPRMREWFGGGGPTGEGFTLSHESGPVGQTVHFDATAAGSAVREYDWYFGDGIHVTTTAPTVAHTYTGRGPHRARLVVTDVEGNRTLYEAGASITIG
>NZ_CP041695.1|WP_143983188.1|6645295_6646318_+|TIGR03617-family-F420-dependent-LLM-class-oxidoreductase
MGLPIDVWLNGSALEASTRAAQLRALGVDGVFTFEGPNDVFFPLVAASRVPELSLMTNVAMAFPRSPVHLAHAAYDLHLLSDGRFRLGLGSQIRTHIEKRYGSTWSRPVERMRDTVLAVKAILRSWQTGERLDHRGPFWRHTLMPPQFSPGPNPCGVPPVLVGALGPRMTEMAAQVADGLLVMPFNSARHYRERTLPAVAAGLDGSERPFEIIAEAIVAMGTTDAEIEVARRAVRNLLAFYGSTPAYRPVLAVEGRAGLQPELNALSKQGRWPEMAARIDDDLVDAIAVSGTPAACAATIRERFGDTISRVCCYFPGYPVTDAAIAELAAALRGGAVSRS
>NZ_CP041695.1|WP_143983187.1|6643525_6645169_+|FAD-binding-protein
MTASPRSADAATEADYVVVGAGSAGAVVAGRLAEAGASVILLEAGRKDNTRLVTSPGMITMVHTVPQLKQRVVWKQYSVPQKHANERKIPMTRGKVLGGSSSVNGMLFVRGNRANYDSWAAEGNTGWSYDEVLPAYKRLENWEEGASDVRGAGGPIEVTRQQDLTPITQEFMIAASETLGAPIIDDYNGTSQEGISIFQQSVRNGLRYSSSRGFITDRPNTNLTVVTHAHVTRVVIENGRATGVEVADKKGARRIIRAAKEVVVSGGVVGSPQILMLSGIGPAGHLRDLGINVHADLPVGQNLHDHLFVPMTYISKKAIHRGIPTYFARGILRELRRPGSSWMGRTVFEAVGFVKTKFAEGDYPDMQIHTLPWSYPIPNQDEDKLHMVDRRPGLTIFPSLIYPKSRGELRLASADPYASPLIDPGYLTDSRDTEFLVEGIRIIREIMAHKAIAGDVIEELAPGPDLMDESALRAELPNRIHSIYHPVGTCRMGVDERAVVDPTLKVRGIEGLRVADASIMPSITGGNTNAPSYMIGEKAAEFITADM
>NZ_CP041695.1|WP_143983186.1|6641965_6643198_-|cytochrome-P450
MTVPSIPTGFDFTDPALWADRSPVEEFAALRRTAPVWWNAQTPEQAAPFEDGGYWVISRLEDVKEISRHPDLFSSNEKGAIIRIPGDSTPEQLDLTRNALLVNMDPPKHTKIRRIISKGFTPRAVEGLRAALTERAHRIVAAAKETGGGDFVEQVACELPLQAIAELLGVPQDDRHKLFTWTNETLNYDDPEYGGDSNAASAEILGYAWNMAEQRRACPVDDIVSQLVNADVDGEALGSDEFGFFVILLAVAGNETTRNAITHGMKAFIDNPDQWELYREQRPRTAPDEIVRWATPVTAFQRTATRDTDIGGQRIRAGDRVGLFYSSANFDEDAFDEPFRFDVLRDPNPHVGFGGTGTHFCVGANLARLEIDLMFNAIADAMPNLSEVEPPQRLRSGWINGIKHWPVRYA
>NZ_CP041695.1|WP_029932795.1|6641430_6641919_-|glutathione-peroxidase
MTDLREIPLRTLSDEPTTLAELAGDKVVLLVNVASKCGLTPQYAGLVELQQTYGPRGFTVVGAPCNQFMGQEPGSAEEIQTFCATNYGVDFPLLEKVEVNGEGRHPLYAELTETPDAEGAAGDIQWNFEKFLIGRDGKVLSRIRPRTEPTDAAVTGAIEAAL
>NZ_CP041695.1|WP_143983185.1|6640011_6641367_+|cytochrome-P450
MTLVRPRQVSGGEHEHGHLEEFRTDPIALMRRVRTECGDIGSFRLADKDVILLSGAQANEFFFRASDDELDQAAAYPFMKPIFGEGVVFDAPPERRKEMLHNSALRAEQMRGHASTIAREVDRMVARWDDEGEIDLLEFFAELTIYTSSACLIGVKFREELDARFARLYHELEQGTDAYCYVDPYAPIDSFRRRDEARHQLVKLVRHIMAGRMANPPEGKADRDMLDVLVSVRDEQGQPRFSASEITGIFISMMFAGHHTTSGTAAWTIIELLRNPAVLDSVVTELDTLYADGQDVSFHALRQIPRLEAALKETLRLHPPLIILMRVARDEFEVCGHGIAAGDLVAATPAVSNRIPEDFPEPDRFDPNRYLDPNQEDLANRWTWIPFGAGRHRCVGAAFALMQLKAIFSILLRDWEFELAQPSDSYRNDHSKMVVQLEQPCAVRYRRRQRH
>NZ_CP041695.1|WP_029932793.1|6639329_6639893_+|TetR-family-transcriptional-regulator
MSMEATRRRLTEKQADTVDKLTRAAMEVLAREGFAGLTVRMVAAAAGVGTATAYTYFSSKEHLVAELFWRRLAATEPPVETDVDSTARVIAVLRQIAMLVADEPALAGAVTSALLGTDPDVAHLRLRIGTEIRNRLVAALGADADPEIVETLESLYAGALVRAGMGYASYIEIADQLEKSARLVLPH
>NZ_CP041695.1|WP_143983184.1|6638531_6639191_-|class-I-SAM-dependent-methyltransferase
MTQAAAGISAATAELFALAEQATGFMPPAEGRALYAAARDHAGDGVIVEIGTYCGKSAIYLGAAARETGATVYTVDHHRGSEEHQPGWEYHDTTLVDPETGVFDTVTAFRRTMVRAGLTDTVVGILGSSTAAARIWRTPVRLLFIDGGHTEEAAQRDYDNWAHWVAGGGLLAIHDVFPDPADGGQAPFHIYRRALDSGKFRELAVTGSLRILQRTAACN
>NZ_CP041695.1|WP_143983183.1|6637748_6638492_-|helix-turn-helix-domain-containing-protein
MEESASSPAYQERPSAAVAGAVVWTRTLRSAVEAPVLPDGCMDLLWMDGALRVAGPDTRAREVALAAGTRISGIRFAPGTAPALLGVPAHELRDAGVELDALWSPADVRRAAESVAAADDPMTGLEVVSAERAAVIEPADPVVRWIAEQLAAGRSVAETATATGFGARRLHRLSLASFGYGPKTLARVLRLQHGLALSRAGVPFAEVAARAGYADQAHFAREVRDLTGMPLRRLLTVQGADQASNAA
>NZ_CP041695.1|WP_143983182.1|6637368_6637770_+|glyoxalase
MTKNAPRLDVIGLVVSDLDASLTFYRRLGLEFGPVLGEGHVEAELPGGFRLALDTEAVIASFHPNWRPPQGDGRIGLAFHCDSPADVDRLFEELVAAGHHAEMKPFDAPWGQRYAVVHDPDGNGVDLYAALDA
>NZ_CP041695.1|WP_143983190.1|6649040_6649658_-|TetR-family-transcriptional-regulator
MTAPAGTRTGPGRPRDPQLDAQVLAAAQELLVTEGYEATTIAAVARRAGVVTTSIYRRWPSRRALIEDAVFALDPGNHPVPTGDLRADLLAWTRLCHGAAAHPAARSAIPGLLAAYHDDRASYRRILDRGEQPTRRALRELLTGAAAAGQASAGCDVDAIFELLRGATLIRALTHGEEGADAFCEQIADALVVVARTPQRSNPNQ
>NZ_CP041695.1|WP_143983191.1|6649780_6650893_+|hypothetical-protein
MLTPQDELLCHQLPTTFDHVLQSDLRWTERIVLYGFDTGGTATVMTGMARYPNRNVTDAYAMVTLDGGKTHVVRMSREIAGRYDGLGSWQVGPYRYEIGEPLRTVHASLDDNEHGVRLHLDFDAEFPAYEQEPAFFRSRGRVREDARRYYQNGRVSGWLEVEGERLELDPDTWWFGRDHSWGTRHGGGGGSLAEGEGMQPPEVPDGVLYFMGIFEFADELVHFAHRETADGQRWHFEGTVVPRIDSAAAPIPIVSVEHDLRFREDFRILREGTFRAHGADGRTREFAVTALKDFWPGLAGYDNYRGYASGLWRGPYYSDGFTVDLSDTDELRRVSMLSETFCRVEHGGEVGHGLVEMVCMGRHARYGFAG
>NZ_CP041695.1|WP_143984396.1|6650951_6651923_+|phosphotransferase
MLRQRLPVSATARIRDWAPSPRGFATETYLFEVVDENRCIPLVFRRPPELSLFPDYDLLRQVLVMERLADTVLPVATVRWLDRSDTALGSPYFVMDRLDGEAPGDYPSYHVAGNYYAASPENRARMWWGCVDTIAAIHRLDWRALGLDFLAMPRFGSGPVDQLVNYLDAALAWATGDPPATYRRAVDWLRAHRYDPEHVVLCWGDARMSNILYDKDYRVTGVLDWETAHLGDHEYDLAWLLFLDWASSVFEGHTPLPGTPTRAETITHYEAATGMPVRNLHYNEILAAVLLSIPLLRMADRVRLPPDTDITGFCTARIEELLP
>NZ_CP041695.1|WP_143983192.1|6651860_6652379_-|DUF1772-domain-containing-protein
MRIHILRAASLLATGLLAGAFGYGLANIAPTFHRVPLQLRLEFHTELMRANSISMQLTMATAALSCTALAMAARGRSRVLAGAAAVLVVASFAITRLGNVPINHKINAWVTDGAPADYAAILSRWDFFHGLRTGTAIAAFVLMIVLALWPHRSGQQLLDARGAEAGDVRVRG
>NZ_CP041695.1|WP_143983193.1|6652864_6653446_+|TetR-family-transcriptional-regulator
MSPGPRRRADAERSRTAILDAATRLLAERPDAGLAAVAAAAGVTRQTIYAHFSSREELLTAVVERTTAATVAAMAAADLDSGSAVDALLRILDVGWRAFEAHPTLQLIAPTAPEESRELHDPVLDHLLPLLRRGQRQGEFDSAATPEWLAAAIVAVSHAAGAEVTAGRMDQPAAERALRRSVLRLVGGEREGR
>NZ_CP041695.1|WP_143983194.1|6653504_6655070_-|MFS-transporter
MSDIAGAAVSTEAPQRNPKRWWILVVLCLSSLVLVIDNMVLNVAIPQISTELGATSQDIQWIIDAYILVFAGLLLTSGSLSDRFGRRLVMVVGLVVFGVASMLAAYADTPQLLIAGRVLMGVGGALIMPSTLSILITVFDEQERPKAIASWSAVAMVGMVGGPIVGGVLLEHFWWGSVFVLNVPIAIVAIAAALLLMPESKGPWTKPDLSGMALSIVGTTALVWTIIEWPTAGFDGTWGALLIAVAGLAAFVVRELRAEYPMVPLQLFRNRVFTGSSFSLVLVTFANGGLLLVLTQYLQFVLDYSPMRTALAFTPFALTALVFNGIGAGLVQKAGVRPVMLVGMAVLAGGFVMLSLLTTDSGFWKPALAMTLVGAGAGLAMPAAIGALMSAIPPERAGVGSALNDTIQQTGGALGVAVLGAVLAGTYTEEMPATAPAAARESIAPALTSGDGMLITAAKDAFTTAMSATFLGGAASVLAATVIAFFLMRGAKAAGGEGGPVETSEQEDAPGGGDDDLVTSG
>NZ_CP041695.1|WP_143983195.1|6655227_6655959_+|TetR-family-transcriptional-regulator
MTAKAEQFATVWTRPQRTRRDTPALNREQIVAEAIALLDSEGLEALSMRKLGTRLNAGATSLYTHVANKEELLELVVDEVFGEIRLPERLAAENWRTDLMEFGRSMRATMLRHVWMPAVLSTAGLVYLGPNVMRMTDGMLGILEVAGFDATTSDRATNAIFAYLIGATTTETAMITTVTRSGLGEQEWMEQIMTASQRMSEPYPRLHRSYARHRELDSARSRDEFFDTELELLIDGLEARRAR
>NZ_CP041695.1|WP_143983196.1|6656025_6657489_-|catalase
MTKPTTTNTGIPVVSDNESLTAGTQGPILLHDHYLIEKLAQFNRERVPERIVHAKGAGAFGELVVTGDVSRYTKAKLFQPGARTESLVRFSTVAGEQGSPDTWRDPRGFAVKFYTEDGNYDIVGNNTPIFFIKDPIKFPDFIRSQKRLPGSGLRDHNMQWDFWTLRPETAHQVTWLMGDRGIPKTYRHMDGFGSHTYQWVNAQGERFWVKYHFKTDQGIEFLTQAEADRIAGEDADFHRRDLWDAIERGEFPSWTVKVQVMPVDEAEGYRFNPFDLTKVWSQKDYPLIEVGKWTLNRNPGNFHVEIEQSAFEPSNVVPGIGFSPDKMLLGRVFAYADAHRYRIGANYAQLPPNRAKAAEVNSYSKEGPMRYDYNPADVPVYAPNSFGGPHADPERAGDEGLWNFDPTMVRAGYVQHAEDGDFTQAGTLVREVLDDAARDRLVANVVGHVLGGVREPVLSRVFEYWKNVDSDLGKRIEEGVRAGLNGH
>NZ_CP041695.1|WP_029932806.1|6657531_6657951_-|transcriptional-repressor
MHTGYDARERLREVGLRVTAPRVAVLDAVVAAPHSDADSVAATVRERLGSVSTQAVYDVLRACVGAGLLRRIEPAGSSALYEARTGDNHHHLVCRSCGTVVDVDCAVGAAPCLEPARTHGFSIDEAEVVFWGLCPACRP
>NZ_CP041695.1|WP_143983197.1|6658391_6659633_+|amino-acid-permease
MATQDDALHRRLGLSDSVVIGLGSMVGAGIFAALAPAAAAAGSWLLLALGVAGVVAYCNATSSARLAALYPVSGGTYVYGRERLGPFWGYLAGWGFVVGKTASCAAMALTVGAYAWPEHARVVAVAAVAVITAINYVGVQKSALATRLIVAAVLVVLATVVAVCLFGEHGGAARADGEIGVRGVLEAAGLLFFAFAGYARIATLGEEVRDPRRTIPRAIGIALGLALAVYALVAVAVLLVLGSKGLAAYADPLARAVDAAGVPALAPVVRVGAVVAAAGSLLALVLGVSRTTLAMARDRQLPGVLAAVHPRYGVPHRAELAVGAVVAVVAVSFDIRAAIGFSSFAVLVYYLIANVSAATLTAAENRPPRAVPVVGAIGCVVVGLSLPTSSVLTGAAVLAAGAGVYAIRRFARR

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Crispr_ID: NZ_CP041695_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041695_11

7554051-7554125

Orphan

Consensus_repeat	Method
GCGTTGCCTTGTCGGGTGGGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041695_11

>merge|NZ_CP041695|11|7554051-7554125|CRISPRCasFinder
GCGTTGCCTTGTCGGGTGGGCCGCTGTCTGCGCTGGTGTTCCGTCGTAGCTTGCGTTGCCTTGTCGGGTGTGCCG

>NZ_CP041695|11|11|7554051-7554125|CRISPRCasFinder
GCGTTGCCTTGTCGGGTGGGCCG	CTGTCTGCGCTGGTGTTCCGTCGTAGCTT
GCGTTGCCTTGTCGGGTGTGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041695.1\|WP_143983690.1\|7561076_7563710_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|366375
NZ_CP041695.1\|WP_143983685.1\|7554810_7555617_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213260
NZ_CP041695.1\|WP_143983687.1\|7556371_7557223_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223673
NZ_CP041695.1\|WP_143983684.1\|7554326_7554731_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041695.1\|WP_143983683.1\|7550914_7551355_-\|DUF4254-domain-containing-protein	unknown	unknown	gnl\|CDD\|379447
NZ_CP041695.1\|WP_143983677.1\|7543089_7543911_-\|urea-ABC-transporter-ATP-binding-protein-UrtD	unknown	unknown	gnl\|CDD\|274568
NZ_CP041695.1\|WP_143983681.1\|7547554_7548964_-\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|226322
NZ_CP041695.1\|WP_143984491.1\|7558382_7559435_-\|XdhC-family-protein	unknown	unknown	gnl\|CDD\|224886
NZ_CP041695.1\|WP_143983679.1\|7545094_7545979_-\|urea-ABC-transporter-permease-subunit-UrtB	unknown	unknown	gnl\|CDD\|200272
NZ_CP041695.1\|WP_143984489.1\|7553092_7554016_+\|hexose-kinase	unknown	unknown	gnl\|CDD\|274804
NZ_CP041695.1\|WP_143983688.1\|7559434_7560124_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133025
NZ_CP041695.1\|WP_143984488.1\|7551741_7552986_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238434
NZ_CP041695.1\|WP_143983689.1\|7560203_7561037_+\|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline-decarboxylase	unknown	unknown	gnl\|CDD\|184333
NZ_CP041695.1\|WP_143983682.1\|7549057_7550623_+\|ATP-dependent-DNA-ligase	unknown	unknown	gnl\|CDD\|235108
NZ_CP041695.1\|WP_143983676.1\|7542397_7543090_-\|urea-ABC-transporter-ATP-binding-subunit-UrtE	unknown	unknown	gnl\|CDD\|274567
NZ_CP041695.1\|WP_143983680.1\|7546054_7547335_-\|urea-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|132448
NZ_CP041695.1\|WP_143984490.1\|7557331_7558390_+\|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl\|CDD\|378117
NZ_CP041695.1\|WP_143983678.1\|7543907_7545098_-\|urea-ABC-transporter-permease-subunit-UrtC	unknown	unknown	gnl\|CDD\|132449
NZ_CP041695.1\|WP_143983686.1\|7555613_7556375_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223673
NZ_CP041695.1\|WP_143983691.1\|7563927_7564332_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP041695.1\|WP_143983690.1\|7561076_7563710_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|366375	pfam00931, NB-ARC, NB-ARC domain.	6.39129e-07
NZ_CP041695.1\|WP_143983685.1\|7554810_7555617_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	2.52249e-103
NZ_CP041695.1\|WP_143983687.1\|7556371_7557223_+\|ABC-transporter-permease-subunit	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	8.99033e-36
NZ_CP041695.1\|WP_143983683.1\|7550914_7551355_-\|DUF4254-domain-containing-protein	gnl\|CDD\|379447	pfam14063, DUF4254, Protein of unknown function (DUF4254). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 195 and 207 amino acids in length.	2.18012e-10
NZ_CP041695.1\|WP_143983677.1\|7543089_7543911_-\|urea-ABC-transporter-ATP-binding-protein-UrtD	gnl\|CDD\|274568	TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	4.30329e-136
NZ_CP041695.1\|WP_143983681.1\|7547554_7548964_-\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|226322	COG3800, COG3800, Predicted transcriptional regulator [General function prediction only].	1.11171e-169
NZ_CP041695.1\|WP_143984491.1\|7558382_7559435_-\|XdhC-family-protein	gnl\|CDD\|224886	COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones].	1.8212e-40
NZ_CP041695.1\|WP_143983679.1\|7545094_7545979_-\|urea-ABC-transporter-permease-subunit-UrtB	gnl\|CDD\|200272	TIGR03409, urea_trans_UrtB, urea ABC transporter, permease protein UrtB. Members of this protein family are ABC transporter permease proteins associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	1.03718e-125
NZ_CP041695.1\|WP_143984489.1\|7553092_7554016_+\|hexose-kinase	gnl\|CDD\|274804	TIGR03828, pfkB, 1-phosphofructokinase. This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688).	2.88685e-86
NZ_CP041695.1\|WP_143983688.1\|7559434_7560124_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133025	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.8414e-37
NZ_CP041695.1\|WP_143984488.1\|7551741_7552986_+\|amidohydrolase-family-protein	gnl\|CDD\|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	1.75723e-106
NZ_CP041695.1\|WP_143983689.1\|7560203_7561037_+\|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline-decarboxylase	gnl\|CDD\|184333	PRK13798, PRK13798, putative OHCU decarboxylase; Provisional.	9.16615e-68
NZ_CP041695.1\|WP_143983682.1\|7549057_7550623_+\|ATP-dependent-DNA-ligase	gnl\|CDD\|235108	PRK03180, ligB, ATP-dependent DNA ligase; Reviewed.	0
NZ_CP041695.1\|WP_143983676.1\|7542397_7543090_-\|urea-ABC-transporter-ATP-binding-subunit-UrtE	gnl\|CDD\|274567	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	1.57027e-122
NZ_CP041695.1\|WP_143983680.1\|7546054_7547335_-\|urea-ABC-transporter-substrate-binding-protein	gnl\|CDD\|132448	TIGR03407, urea_ABC_UrtA, urea ABC transporter, urea binding protein. Members of this protein family are ABC transporter substrate-binding proteins associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. Members of this protein family tend to have the twin-arginine signal for Sec-independent transport across the plasma membrane. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP041695.1\|WP_143984490.1\|7557331_7558390_+\|twin-arginine-translocation-signal-domain-containing-protein	gnl\|CDD\|378117	pfam09084, NMT1, NMT1/THI5 like. This family contains the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine. They are regulated by thiamine. The protein adopts a fold related to the periplasmic binding protein (PBP) family. Both pyridoxal-5'-phosphate (PLP) and an iron atom are bound to the protein suggesting numerous residues of the active site necessary for HMP-P biosynthesis. The yeast protein is a dimer and, although exceptionally using PLP as a substrate, has notable similarities with enzymes dependent on this molecule as a cofactor.	3.85005e-41
NZ_CP041695.1\|WP_143983678.1\|7543907_7545098_-\|urea-ABC-transporter-permease-subunit-UrtC	gnl\|CDD\|132449	TIGR03408, urea_trans_UrtC, urea ABC transporter, permease protein UrtC. Members of this protein family are ABC transporter permease proteins associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	9.83144e-139
NZ_CP041695.1\|WP_143983686.1\|7555613_7556375_+\|ABC-transporter-permease-subunit	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	1.89078e-35

>NZ_CP041695.1|WP_143984489.1|7553092_7554016_+|hexose-kinase
MNPAYDMTYRVERFDRGRAHRVRSVDQRIGGRGINVTRVLNQLGRYARATGFSDHSFAAAAELEMPVDFVHALPWVRRTVVISESDDGTATALWEPGARISDAHAVEQLRVRVSGLLSDSSGVVIAGSLPGGVDVSVPAELARLATDAGVPVVCDVDGPALELAAGVPGVVLMPNTEELERLTGMPATTPAEIMAAVDPLVARGVGAVIVTCGGAGMVAVTPGRAWSAALPEPLAGNPTGAGDAAAAAVIAGLARSREPDWPALLTDAVATSAAAVVIPVAGEIDRALRDRLTPTVRVTELAAVRAP
>NZ_CP041695.1|WP_143984488.1|7551741_7552986_+|amidohydrolase-family-protein
MRVCRGPHRSPNTGECHEYEEVRGVAVSAELHLELHLRGRVVSAGYPFEDGVVTVSGERITAVRSFTDWKAQRPYSPTPLPVGTLLPGLVDMHNHGGGGHGFDTLDAEEATAAAEYHHALGTTTILASIVSAPADEMVEQVAMLRELAAVGMIGGIHVEGPFLADTRCGAHDRRHLLAPDPRLTSRLLDAAGGHLRVMTLAPELPGFDTVARMLADRGAVVALGHSEADFDAFSKALRPNGFATSVTHVGNGMPPIHHRASGAGAAALTAASRGQIVVELIGDGVHVDAGFGTMVFAVAEDQIALVTDAMRAAGMPDGRYRLGAREMEVGGGVARTEDGAIAGGTSHLLQGVSWAVRECGVSLAEAVRAASLTPAIALGLTEVGDLCPGRYADVLVVDDELGLRRVLRRGRWLS
>NZ_CP041695.1|WP_143983683.1|7550914_7551355_-|DUF4254-domain-containing-protein
MHPLPTKNLLLRACRGLPPDDHPVLRYAGLLADLHERRLAARPGATSAIDHHRARLVHDIDRWVATASPKAERDARLHTETVGTVVDRLAQFSALAYLTLTTCPDEAVHDASTRLTELATAYEDLAQDIAAGRRRLPNLLVDSGYE
>NZ_CP041695.1|WP_143983682.1|7549057_7550623_+|ATP-dependent-DNA-ligase
MLLSEVVRASASVRATTSRKSKIATLAALLQRVTVDELAQVVAWVSGDLRQGRVGAGWRTLTAVAVDPAPEPTLTVGGVDRVLSELAATSGAGSVVRRRELLVELLSAATVEERDFLLRLLTGELRQGALTAVVAEAVAAAFEVPVAAVRRAHMLSGRLPVTAVAAATGGAAALAAFRLEVGRPLQPMLASPGSALDAAMAEFAGEVSVEHKMDGARIQVHRDGERVWVFTRTLRDITAGVPELVGLVRELDCTSVVLDGETLALNDAGRPRPFQETMSRFASDPALVASDPGLAQANSTRDLLLHPYFFDCLHLDGVDLLDAPLRDRRAALTKVAPGHSIPALITPDAEAAAEYFDGALAAGHEGIMIKSLDSVYAAGRRGRAWQKIKPTHTLDLVVLGAEWGYGRRTGYLSNLHLGARDPDGGEPVMVGKTFKGLTDALLHWQTAEFPRHERDRDSTTVYLRPELVVEIAIDGVQASTRYTGGVALRFARVVRYRPDKEPAQADTIDTVRALLPGTRPT
>NZ_CP041695.1|WP_143983681.1|7547554_7548964_-|ImmA/IrrE-family-metallo-endopeptidase
MAKTYVGARLRQLRTERGLSQVSLAKKLEISASYLNQIEHDVRPLTVPVLLRISEVFGVDASFFSSQDDTRLIAELQEVVMDQELGIEADAAEIADMVSAHPTLARAMVNMHRRYRNTTAQLAAATEDRFADGSGSGAISRPHEEVRDFFYQRQNYIHELDTAAEELATRMRFHGGDLKREIARRLTTAHGVQIVERIDLGEGVLHRYDEENRRLEIAPHLSGGQRVFKLAAELAYLECGELIEKLVEEGNFTNDETRVLAKLGLANYFAAATVLPYTHFHEVAEDFRYDIERLSAFFTQSYETICHRLSTLQRPKLRGVPFSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYETFAYPGRIMTQIAQMPDGRKYLWIARTVERRATRYGEPSKTFAIGLGCELRHATRVVYADGLDLHDPKATPIGAGCRVCERTNCPQRAFPPLGKSLDISEHRSSISPYVIL
>NZ_CP041695.1|WP_143983680.1|7546054_7547335_-|urea-ABC-transporter-substrate-binding-protein
MQDSRDLGRDTSRRLRKAIAVPTAVALSALLLAGCGSRDTDTASGSNATSCVDTSAPTIKVGSLHSLTGTMAISEVTVANSTKMAVDEINAAGGVLGKQIELVLEDGASDPKTFAEKAEKLISSDCVAAVFGGWTSASRKAMKPKFESLNSLLYYPVQYEGLEDSKNIFYTGATTNQQILPALDYLKQQGITSLYLVGSDYVFPQTANREIKAWAEANGMEIKGEDYAPLGSTDFSTIVNKVRSAGAGAVFNTLNGDSNVAFFREYANAGLNAQTMPVVSVSIAEEEVAGIGVQNIVGQLTSWNYYQTLDTPANKKFVDAYKAAFGADKPTSDPMEAAYTSVYLWKNTVEKANSFAVADIQAAADGVSFDAPEGTVVIDGDNHHITKTARIGEIRADGLIYTVWDSGQPIVPDPYLKSYDWAKGLK
>NZ_CP041695.1|WP_143983679.1|7545094_7545979_-|urea-ABC-transporter-permease-subunit-UrtB
MDVAVAQLFTGLSLGSILLLAALGLSLTFGQMGVINMAHGEFIMAGCYTTFVVQQAISATGVALIVSLIVGFIVGGLLGAALEAGLIRFMYDRPLDTLLVTFGVGLVLQQLARNIFGAPAKNVVAPEWLTGGIAIAGTVVPKTRIFIMVLAVTAVIALAVALKATPLGRRIRAVVQNRSLAETSGISSRFTDLSTFFIGSGLAAVAGVALTLIGSTSPTIGQSYLVDAFLVVVIGGLGQIKGTVIAAFGMGLLNSFIEYSTTASVAKVIVFIVIVVFLQVRPQGLFTVRTRSLA
>NZ_CP041695.1|WP_143983678.1|7543907_7545098_-|urea-ABC-transporter-permease-subunit-UrtC
MSIIGRFGANSSVKPLAGFAIAAILLFGVAPVALSDFRLSLLAKFLCFAIVAVGIGLAWGRGGMLTLGQGVFFGIGAYIMAMHMQMADAARSGEDVPEFMVIAGIPELPSYWQPFASAPVAILSILVLPALLAAALGFGVFKRRVKGAYFAILSQALAAALAILLTGQQTIGGFTGLSDFRSFFGFRLDDPVNRRMLFFIAAGALLAVVAIARQLMHSRYGELLVAVRDQEERVRFLGYDPANIKIVAYVVAAFFAGIAGALFTPIVGIISPADIGVVPSIAFLIGVAIGGRTTLLGPVLGAIGVAWAQTTFSEQFPSGWTYLQGVLFIVVVGFLPAGLAGFGPLAKQLAQRVRPTSRATGDAAAPDAVVDPVTPTDASVTGDPESPAEEEKVQAR
>NZ_CP041695.1|WP_143983677.1|7543089_7543911_-|urea-ABC-transporter-ATP-binding-protein-UrtD
MTTVAHEPKIGGNAGMDSEYLEIRGLSVSFDGFKAVSDVDLTVLQGDLRFLIGPNGAGKTTLIDAITGLVPATGSAQKSGRELIGRKVHQIARMGVGRTFQTASVFEQLTVLQNLDIAAGAGRSALTLLRRRKSVLPAIDEALETTGLTALRDKPAGVLAHGQKQWLEIGMLLVQNASVLLLDEPVAGMSAEEREETGNLLRRIGGDRVVVVVEHDMDFMRSFATSVTVLAGGRVLAEGTVAEVQDDPKVQEVYLGTATAAEHSAATESEEAR
>NZ_CP041695.1|WP_143983676.1|7542397_7543090_-|urea-ABC-transporter-ATP-binding-subunit-UrtE
MLELADIHTGYGRTEVIHGVSLTVPDDGVAAIMGHNGAGKTSLLRAAVGLLPTKSGRITFDGKDITKLPPSKRVRHGIAYVPQGQQSFGQLSTMENLQVVADGRKRGKELVAEALDLFPALRELLTRKAGLLSGGQRQQLAIARALITEPKLLILDEPTEGIQPSVVAEIERTILDLTRRGGLSVLLVEQHIGFALQAAQQYYVLRSGRITSSGAGGAGAETDVRTAMAI
>NZ_CP041695.1|WP_143983684.1|7554326_7554731_+|hypothetical-protein
MSEHWFPPEPTAATEYEYRMPRSVRAAQVIVLGFAAVGMVCTAASGWLLGTKAAVTTALPFVPGFLLGLVGLTFNSEGQSVRIAAILLAVLNMLWTVPSITDGRPPGPLGIVASLAVIMLLFRREARDWFEPTW
>NZ_CP041695.1|WP_143983685.1|7554810_7555617_+|ATP-binding-cassette-domain-containing-protein
MSSADSTTVGTGIHIGGLSKSFRAGRRTVHALDTVDLHTGRGAFLSLLGPSGCGKSTILRILAGLDEPSAGTARINGLTPVELRSRHELGIAFQDAALLPWRSVAANIELPLQVAGIPPDPHLITDLIELVGLRGFEKAKPAQLSGGMRQRVSIARALVVKPTVLLLDEPFGALDDMTRQRLNLELLRIWTEQPATTLMVTHGIGEAVFLSDQVAVMSPRPGRVVEVVDIDLPRPRTPEMMRSPEFHKLCDYLSELLFGGSGHGGVAE
>NZ_CP041695.1|WP_143983686.1|7555613_7556375_+|ABC-transporter-permease-subunit
MNWGTAKKLGGVTGIAALVGIWWLAAAAGVAGGTIPSPWQVAHTMYTDGWALYGPNFRITAWGALQGFLWGNVLAIILAVLVILVPPIEMLATQLAILSYCTPLLALGPIILVVFGGRTPTVFLAAMYCFFTTMVGTVAGLRSADGASLDLVRAYGGGRWQQLRRVRLVAALPNTFAALRIAAPSAVLGAIIGEYLGGVDSGIGVALTAAQNAYNVPRTWGMAIAAAALAGVGYAVVALVARFAVPWTRAEAR
>NZ_CP041695.1|WP_143983687.1|7556371_7557223_+|ABC-transporter-permease-subunit
MSTVPARARADAPRTRAALRQVVGFLAPLVVSLILLVALWYAFLALFPQVGLVGKSPTEVWTYLVSGPTAPSARDAILADLRITLRDAGIGFLAGLGSALVVAALFVTVPAAAQAFLPVAMLLRSVPLVALTPIIVLVFGRGLLGVTVLAAIVVFFPALVMMMTGLRSAPRQAMELVEAYGGSRWTALRTVAIPAALPSVFAAARVAVPGALIGALLGEWLGSGTGLGASLIRAIPTFQYNRLWASIVVVTLVSVFVYAVVGVLENLVLARFAPDAGGDRYTS
>NZ_CP041695.1|WP_143984490.1|7557331_7558390_+|twin-arginine-translocation-signal-domain-containing-protein
MLNRRSFLRYSALTGAALGGAGLLAACGDDAAGPANGTTPDGSKYGTVAIQLSWIKNIEFAGEYFADSKGYFREAGFGSVNLVAGGAASTSVEAGLGTGKIWLGMSAPQTTAPAVLEGLPAKIVGATYQKNPFCIVSAAGSPIASPQDMRGRRIGVQDTNQLIFAALLTANGMRPDDVTIVPAQFDPTPLANGEVDGWVSYVTNEPIILAAKGFANTNFLFADFGLPLVAETLTVTQETIDNEREKLKAFLAAEIKGWRDAVADPAEGARLAVEVYGKDLQLDLAEQTEEAIAQNDLVVSADTAANGLFTMTDDLIERNIAALGKSGIDIEADRLFDMSVLAEVYAEQPDLK
>NZ_CP041695.1|WP_143984491.1|7558382_7559435_-|XdhC-family-protein
MRDIVDDLLRVWHSGHTAGLATLVRAVGSTPLPVGSAMMVDAQGRAFGSVSAGCAEAEVYQAAVEAAQTGRRAMHRFGPATGMDCGGTMDVFAEPFSRTHFPEFPTVAADIAAQRQVTVFTVVWHSDPDVIGQHLVTDRKHGTELVSLPDSDVFVSSFTRPPRLILVGANAFAAALATQARLVGYRVTLCDARPTFASPEAYPQCEVVVDWPHRYLNAQSAAGEIDGSTAIVVLSHDAKFEIPLLTVALRLPELGYLAAVGSRQVHARRLEALQAGGFDAATLSRLHAPAGLDLGGRTAPEAALAITAELLAARNGTSAAPLSVRTGPIHSATAAEARAGARGPESHSLT
>NZ_CP041695.1|WP_143983688.1|7559434_7560124_-|NTP-transferase-domain-containing-protein
MNRGRCDGILLAAGAGTRYGMPKVLAEDGAWLRGAVHALHAGGCERVYVVLGATGPPHRALDDPDDSSLPRWQISQTHGILIPAAAQPVWASDWAAGMSASLRAGLAAVVAHPAGARAQARRIGGLPEFVAIMPVDTPDVGPEVVARVIAAARGAGSGLARAVFDGRPGHPVVIGRGHWAGVTVALTGKSGAASYLRERADMVCVTCGDVATGWDHDYPRHAHTPSGSK
>NZ_CP041695.1|WP_143983689.1|7560203_7561037_+|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline-decarboxylase
MTENAIGLEEFAALDETAATELLLTVCASPRWAARVAEGRPFATLDELLRAADAALAELPEDEIDRALAGHPRIGDRPDNAASAREQAGMAGADDRVRAAIVAGNRAYEDRFGHVYLVRASGRTPEELLNILTERLANDPPTERRIVREQLAEINRLRLRHLVDTGRRNAAAATLSTHVLDAVRGRPATGVRVTLFDAAGAESAADTTDADGRITGLGGTLGAGTYRLRFETGEYFAAQAVDSFYPEVTITFTIAEERHYHVPILLSPFAYSTYRGS
>NZ_CP041695.1|WP_143983690.1|7561076_7563710_-|tetratricopeptide-repeat-protein
MSRNGDSDDYGAETRKRLRGILLGTGLAEHQVVEPLAAELQRNGCRPRKAWRLANGYTLEAAAREYNRSTGDDRAAMTAARISEFESWPRSRGNGRERPRPTVATLKVLATVYRTSWEQLVDVADLAKMPGRDITGYRDAVARRCTAPPVLDDHGLPTDIVPFIGRHDQRAELHRRVREHAGGRGPGVHVVSGLAGVGKTALARYLIEEYRDRYPDGWIWEDLRGHSDGRTPRTPAGVLEQLLLRLGVPPETIENEAARRAERWRAEMRGRRMLIVFDNALDSKQVRDLLPHAPGSFVLITSRHKLTGLSGAAPLQLDAMGTAEAEELLVRLSHLPPGYDVGAVRRILETAGRLPLAIRLVAGQIAHHGPEMLAAADRDFQRLTDRVQHAPIGTPSEESPAAPILDFFAAEGESLAAAFELSYQRLWEPELRRAVRLLGLFPGSEITAETLAPMADMPPLAANALIRRIFEVGLLDPAVNGPSGQRYRIHDVTRLFARKQADQEDLPSERAAAIGRLVRYCLTIARRVGAPRPFDLAGSFPNVPGPGPSDAVDRAREWLTGEKEVLLGCIRVAGPTAEAGELARLLASHLSGLGHWSDARWLFVRALDVARGDRDATAECDVLYGLGTVHRLACDYETASKCFQEAHAIAARIDDPLRMASGLWGYAEVTRHIGDYDRARHAYADALGIARQLQNLEFEGDSLRGLGHIERMGGDPAAARHYYEAALDIAAQIDDDYSRGWTLWGLGNVIRMAGDFTTARAHFEQSHEIGGELDDALLVADALRGLGHTERDLGDLDAAQGFYSDSLDVARRSGDPHGEADAWRALGGIAAGAGRRHRPRACEFLRRSLALYESMGVKALAEQVRADMRRLDCDSHA
>NZ_CP041695.1|WP_143983691.1|7563927_7564332_+|hypothetical-protein
MAITASDWLITSDVAHEVAFRVDVPEPQRGRWVLSYLPTSRRLTREQAIAGVVLAEMILMGLLRPGGEFDAEIAALHAGMLGLTVTDVMCLLALRVGDGEPKPLRPGAACPGGRAATAPDRICRHGRAREEVSR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP041695_9	9.2\|6569566\|15\|NZ_CP041695\|CRISPRCasFinder	6569566-6569580	15	NZ_CP041695.1	48555-48569	0	1.0
NZ_CP041695_9	9.2\|6569566\|15\|NZ_CP041695\|CRISPRCasFinder	6569566-6569580	15	NZ_CP041695.1	5807026-5807040	0	1.0
NZ_CP041695_9	9.2\|6569566\|15\|NZ_CP041695\|CRISPRCasFinder	6569566-6569580	15	NZ_CP041695.1	5832092-5832106	0	1.0
NZ_CP041695_9	9.2\|6569566\|15\|NZ_CP041695\|CRISPRCasFinder	6569566-6569580	15	NZ_CP041695.1	6808155-6808169	0	1.0
NZ_CP041695_2	2.2\|840023\|17\|NZ_CP041695\|CRISPRCasFinder	840023-840039	17	NZ_CP041695.1	5228030-5228046	1	0.941
NZ_CP041695_2	2.2\|840023\|17\|NZ_CP041695\|CRISPRCasFinder	840023-840039	17	NZ_CP041695.1	2312296-2312312	1	0.941
NZ_CP041695_2	2.2\|840023\|17\|NZ_CP041695\|CRISPRCasFinder	840023-840039	17	NZ_CP041695.1	3172281-3172297	1	0.941

1. spacer 9.2|6569566|15|NZ_CP041695|CRISPRCasFinder matches to position: 48555-48569, mismatch: 0, identity: 1.0

cgccgcgccctcgcc	CRISPR spacer
cgccgcgccctcgcc	Protospacer
***************

2. spacer 9.2|6569566|15|NZ_CP041695|CRISPRCasFinder matches to position: 5807026-5807040, mismatch: 0, identity: 1.0

cgccgcgccctcgcc	CRISPR spacer
cgccgcgccctcgcc	Protospacer
***************

3. spacer 9.2|6569566|15|NZ_CP041695|CRISPRCasFinder matches to position: 5832092-5832106, mismatch: 0, identity: 1.0

cgccgcgccctcgcc	CRISPR spacer
cgccgcgccctcgcc	Protospacer
***************

4. spacer 9.2|6569566|15|NZ_CP041695|CRISPRCasFinder matches to position: 6808155-6808169, mismatch: 0, identity: 1.0

cgccgcgccctcgcc	CRISPR spacer
cgccgcgccctcgcc	Protospacer
***************

5. spacer 2.2|840023|17|NZ_CP041695|CRISPRCasFinder matches to position: 5228030-5228046, mismatch: 1, identity: 0.941

tgtgccgggtgttcggc	CRISPR spacer
tgtgccgggtgtgcggc	Protospacer
************ ****

6. spacer 2.2|840023|17|NZ_CP041695|CRISPRCasFinder matches to position: 2312296-2312312, mismatch: 1, identity: 0.941

tgtgccgggtgttcggc	CRISPR spacer
tgtgccgggtggtcggc	Protospacer
*********** *****

7. spacer 2.2|840023|17|NZ_CP041695|CRISPRCasFinder matches to position: 3172281-3172297, mismatch: 1, identity: 0.941

tgtgccgggtgttcggc	CRISPR spacer
tgtgccgggtgtgcggc	Protospacer
************ ****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MT657343	Microbacterium phage GaeCeo, complete genome	29488-29511	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MN310543	Microbacterium phage ChickenKing, complete genome	29255-29278	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK279853	Gordonia phage Gray, complete genome	81714-81737	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MN586022	Gordonia phage Chidiebere, complete genome	82384-82407	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK864266	Gordonia phage Arri, complete genome	19288-19311	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MN284907	Gordonia phage Fireball, complete genome	18724-18747	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK864264	Gordonia phage VanDeWege, complete genome	19398-19421	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MH479910	Gordonia phage Danyall, complete genome	19106-19129	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MT639651	Gordonia phage Portcullis, complete genome	18634-18657	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MH479917	Gordonia phage KimmyK, complete genome	19306-19329	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MH669015	Gordonia phage TillyBobJoe, complete genome	18389-18412	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK814761	Gordonia phage SmokingBunny, complete genome	18590-18613	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	KX557286	Gordonia phage Twister6, complete genome	19017-19040	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK864267	Gordonia phage Valary, complete genome	19523-19546	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK967381	Gordonia phage RogerDodger, complete genome	19484-19507	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MT310872	Gordonia phage Evamon, complete genome	18592-18615	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MT521998	Gordonia phage Jambalaya, complete genome	18371-18394	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK864265	Gordonia phage Barb, complete genome	19306-19329	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NC_030913	Gordonia phage Wizard, complete genome	18724-18747	1	0.958
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MN010760	Gordonia phage Nubi, complete genome	18612-18635	1	0.958
NZ_CP041695_9	9.3\|6569605\|21\|NZ_CP041695\|CRISPRCasFinder	6569605-6569625	21	NC_018023	Mycolicibacterium chubuense NBB4 plasmid pMYCCH.02, complete sequence	91336-91356	1	0.952
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2521-2544	2	0.917
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NC_042118	Microbacterium phage Koji, complete genome	28881-28904	2	0.917
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MG925347	Microbacterium phage Lucky3, complete genome	28796-28819	2	0.917
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MT522001	Microbacterium phage Karate, complete genome	28671-28694	2	0.917
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MG925343	Microbacterium phage Golden, complete genome	28796-28819	2	0.917
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_LR134458	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 16, complete sequence	33750-33773	2	0.917
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	131859-131882	2	0.917
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NC_012520	Rhodococcus opacus B4 plasmid pROB01, complete sequence	477401-477424	2	0.917
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NC_008271	Rhodococcus jostii RHA1 plasmid pRHL3, complete sequence	84414-84437	2	0.917
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MN096367	Microbacterium phage Nucci, complete genome	28763-28786	2	0.917
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK937603	Gordonia phage Bakery, complete genome	18517-18540	2	0.917
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK305889	Gordonia phage Mutzi, complete genome	19036-19059	2	0.917
NZ_CP041695_9	9.3\|6569605\|21\|NZ_CP041695\|CRISPRCasFinder	6569605-6569625	21	NZ_AP014581	Burkholderia sp. RPE67 plasmid p3, complete sequence	122712-122732	2	0.905
NZ_CP041695_9	9.3\|6569605\|21\|NZ_CP041695\|CRISPRCasFinder	6569605-6569625	21	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	400842-400862	2	0.905
NZ_CP041695_1	1.1\|321794\|31\|NZ_CP041695\|CRISPRCasFinder	321794-321824	31	KR080200	Mycobacterium phage AlanGrant, complete genome	11286-11316	3	0.903
NZ_CP041695_1	1.1\|321794\|31\|NZ_CP041695\|CRISPRCasFinder	321794-321824	31	KR080194	Mycobacterium phage Vincenzo, complete genome	11286-11316	3	0.903
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	202938-202961	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	2605-2628	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NC_011879	Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence	367218-367241	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NC_010811	Ralstonia phage RSL1, complete genome	219884-219907	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MH045559	Microbacterium phage Etna, complete genome	29370-29393	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MH590590	Microbacterium phage Schnapsidee, complete genome	29348-29371	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	AB366653	Ralstonia phage RSL1 DNA, complete genome	219884-219907	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	LR743524	Xylella phage Bacata genome assembly, chromosome: 1	32745-32768	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MT498062	Microbacterium phage Leafus, complete genome	29487-29510	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MG839030	Microbacterium phage Balsa, complete genome	29344-29367	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MH479922	Microbacterium phage Redfield, complete genome	29341-29364	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MG944216	Microbacterium phage Pajaza, complete genome	23386-23409	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MG944226	Microbacterium phage Casey, complete genome	23386-23409	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MG839024	Microbacterium phage Peppino, complete genome	29336-29359	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MG839025	Microbacterium phage Raccoon, complete genome	29309-29332	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NC_042345	Phage Salvo, complete genome	11943-11966	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MH045555	Microbacterium phage BeeBee8, complete genome	29512-29535	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MG944218	Microbacterium phage Pikmin, complete genome	23386-23409	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NC_042110	Microbacterium phage Hamlet, complete genome	29351-29374	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MT522003	Microbacterium phage Rie18, complete genome	28217-28240	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	342027-342050	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1563068-1563091	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1563263-1563286	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2829019-2829042	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4864904-4864927	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_CP022424	Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence	172414-172437	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_CP041653	Streptomyces sp. RLB1-9 plasmid pRLB1-9.1, complete sequence	64457-64480	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NC_006912	Streptomyces sp. FQ1 plasmid pFP1, complete sequence	28242-28265	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_CP029602	Streptomyces sp. WAC 01438 plasmid unnamed1, complete sequence	3786-3809	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_CP029602	Streptomyces sp. WAC 01438 plasmid unnamed1, complete sequence	50255-50278	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_CP032230	Streptomyces seoulensis strain KCTC 9819 plasmid unnamed	57808-57831	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MT818420	Microbacterium phage Gilda, complete genome	28666-28689	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK737941	Microbacterium phage Rachella, complete genome	28668-28691	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NC_048144	Microbacterium phage Schubert, complete genome	28591-28614	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK801732	Microbacterium phage NarutoRun, complete genome	28642-28665	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NC_047986	Microbacterium phage Krampus, complete genome	28674-28697	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK801731	Microbacterium phage Anakin, complete genome	28642-28665	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MH271292	Microbacterium phage AnnaSerena, complete genome	28677-28700	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MH588547	Caulobacter phage CcrSC, complete genome	147212-147235	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK875791	Gordonia phage Yakult, complete genome	26752-26775	3	0.875
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_CP050092	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence	343912-343935	4	0.833
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_CP053440	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence	208491-208514	4	0.833
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_CP048281	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence	240726-240749	4	0.833
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	154959-154982	4	0.833
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NC_012848	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence	22891-22914	4	0.833
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	1105858-1105881	4	0.833
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	467448-467471	4	0.833
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MK894437	Microbacterium phage MonChoix, complete genome	29243-29266	4	0.833
NZ_CP041695_9	9.1\|6569518\|24\|NZ_CP041695\|CRISPRCasFinder	6569518-6569541	24	MN062703	Microbacterium phage McGalleon, complete genome	30642-30665	4	0.833
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	174143-174172	5	0.833
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	195059-195088	5	0.833
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	271278-271307	5	0.833
NZ_CP041695_6	6.1\|2653198\|26\|NZ_CP041695\|CRISPRCasFinder	2653198-2653223	26	NC_011664	Shewanella baltica OS223 plasmid pS22301, complete sequence	31163-31188	5	0.808
NZ_CP041695_6	6.1\|2653198\|26\|NZ_CP041695\|CRISPRCasFinder	2653198-2653223	26	NC_015724	Cupriavidus necator N-1 plasmid pBB2, complete sequence	299833-299858	5	0.808
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	192656-192685	6	0.8
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NC_022049	Paracoccus aminophilus JCM 7686 plasmid pAMI4, complete sequence	248677-248706	6	0.8
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NC_013857	Azospirillum sp. B510 plasmid pAB510c, complete sequence	182604-182633	6	0.8
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1376427-1376456	6	0.8
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1381095-1381124	6	0.8
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	MT498058	Gordonia phage Clawz, complete genome	53757-53786	6	0.8
NZ_CP041695_11	11.1\|7554074\|29\|NZ_CP041695\|CRISPRCasFinder	7554074-7554102	29	NZ_CP014516	Frondihabitans sp. PAMC 28766 strain SR6 plasmid 3, complete sequence	14978-15006	6	0.793
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP042276	Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence	26702-26731	7	0.767
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP025432	Paracoccus zhejiangensis strain J6 plasmid pPZ02, complete sequence	128001-128030	7	0.767
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	754418-754447	7	0.767
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	234748-234777	7	0.767
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	206520-206549	7	0.767
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	18057-18086	8	0.733
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	350345-350374	8	0.733
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP025114	Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence	233079-233108	8	0.733
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	244020-244049	8	0.733
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	116943-116972	8	0.733
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP044544	Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence	145459-145488	8	0.733
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP012918	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p4, complete sequence	47191-47220	8	0.733
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	687448-687477	9	0.7
NZ_CP041695_3	3.1\|848163\|30\|NZ_CP041695\|CRISPRCasFinder	848163-848192	30	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	411159-411188	9	0.7

1. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MT657343 (Microbacterium phage GaeCeo, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcggcggg	Protospacer
***********************

2. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MN310543 (Microbacterium phage ChickenKing, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcggcggg	Protospacer
***********************

3. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK279853 (Gordonia phage Gray, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttggcggcggt	Protospacer
 ***********************

4. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MN586022 (Gordonia phage Chidiebere, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttggcggcggt	Protospacer
 ***********************

5. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK864266 (Gordonia phage Arri, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

6. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MN284907 (Gordonia phage Fireball, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

7. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK864264 (Gordonia phage VanDeWege, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

8. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MH479910 (Gordonia phage Danyall, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

9. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MT639651 (Gordonia phage Portcullis, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

10. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MH479917 (Gordonia phage KimmyK, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

11. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MH669015 (Gordonia phage TillyBobJoe, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

12. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK814761 (Gordonia phage SmokingBunny, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

13. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to KX557286 (Gordonia phage Twister6, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

14. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK864267 (Gordonia phage Valary, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

15. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK967381 (Gordonia phage RogerDodger, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

16. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MT310872 (Gordonia phage Evamon, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

17. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MT521998 (Gordonia phage Jambalaya, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

18. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK864265 (Gordonia phage Barb, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

19. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NC_030913 (Gordonia phage Wizard, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

20. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MN010760 (Gordonia phage Nubi, complete genome) position: , mismatch: 1, identity: 0.958

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcggt	Protospacer
*************** ********

21. spacer 9.3|6569605|21|NZ_CP041695|CRISPRCasFinder matches to NC_018023 (Mycolicibacterium chubuense NBB4 plasmid pMYCCH.02, complete sequence) position: , mismatch: 1, identity: 0.952

tgtggtcttcttggcggtggt	CRISPR spacer
tgaggtcttcttggcggtggt	Protospacer
** ******************

22. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 2, identity: 0.917

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggggc	Protospacer
******************** **.

23. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NC_042118 (Microbacterium phage Koji, complete genome) position: , mismatch: 2, identity: 0.917

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttggctgcggt	Protospacer
 ***************** *****

24. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MG925347 (Microbacterium phage Lucky3, complete genome) position: , mismatch: 2, identity: 0.917

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttggctgcggt	Protospacer
 ***************** *****

25. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MT522001 (Microbacterium phage Karate, complete genome) position: , mismatch: 2, identity: 0.917

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttcgcggcggt	Protospacer
 ************** ********

26. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MG925343 (Microbacterium phage Golden, complete genome) position: , mismatch: 2, identity: 0.917

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttggctgcggt	Protospacer
 ***************** *****

27. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_LR134458 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 16, complete sequence) position: , mismatch: 2, identity: 0.917

cgccggagccttcttggcggcggt	CRISPR spacer
cgcgggagccttcttggcggtggt	Protospacer
*** ****************.***

28. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 2, identity: 0.917

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcgggggt	Protospacer
*************** **** ***

29. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NC_012520 (Rhodococcus opacus B4 plasmid pROB01, complete sequence) position: , mismatch: 2, identity: 0.917

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagacttcttggcggccgt	Protospacer
******** ************ **

30. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NC_008271 (Rhodococcus jostii RHA1 plasmid pRHL3, complete sequence) position: , mismatch: 2, identity: 0.917

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagacttcttggcggccgt	Protospacer
******** ************ **

31. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MN096367 (Microbacterium phage Nucci, complete genome) position: , mismatch: 2, identity: 0.917

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgctgcggt	Protospacer
*************** ** *****

32. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK937603 (Gordonia phage Bakery, complete genome) position: , mismatch: 2, identity: 0.917

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgctgcggt	Protospacer
*************** ** *****

33. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK305889 (Gordonia phage Mutzi, complete genome) position: , mismatch: 2, identity: 0.917

cgccggagccttcttggcggcggt	CRISPR spacer
cgctggagccttcttcgcggcggt	Protospacer
***.*********** ********

34. spacer 9.3|6569605|21|NZ_CP041695|CRISPRCasFinder matches to NZ_AP014581 (Burkholderia sp. RPE67 plasmid p3, complete sequence) position: , mismatch: 2, identity: 0.905

tgtggtcttcttggcggtggt	CRISPR spacer
ggtggtcttcttggcggtggc	Protospacer
 *******************.

35. spacer 9.3|6569605|21|NZ_CP041695|CRISPRCasFinder matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 2, identity: 0.905

tgtggtcttcttggcggtggt	CRISPR spacer
gatggtcttcttggcggtggt	Protospacer
 .*******************

36. spacer 1.1|321794|31|NZ_CP041695|CRISPRCasFinder matches to KR080200 (Mycobacterium phage AlanGrant, complete genome) position: , mismatch: 3, identity: 0.903

cggtcagccgtcctacggccagtcgggtggc	CRISPR spacer
cggtcagccgtcccacggccaggcgggtgcc	Protospacer
*************.******** ****** *

37. spacer 1.1|321794|31|NZ_CP041695|CRISPRCasFinder matches to KR080194 (Mycobacterium phage Vincenzo, complete genome) position: , mismatch: 3, identity: 0.903

cggtcagccgtcctacggccagtcgggtggc	CRISPR spacer
cggtcagccgtcccacggccaggcgggtgcc	Protospacer
*************.******** ****** *

38. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_CP050098 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
acccggagccttcttggcggcgga	Protospacer
  *********************

39. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

40. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NC_011879 (Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
tgccggagccttcttggcggcagc	Protospacer
.********************.*.

41. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NC_010811 (Ralstonia phage RSL1, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
agccggagccttcttggcggccgg	Protospacer
 ******************** *

42. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MH045559 (Microbacterium phage Etna, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

43. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MH590590 (Microbacterium phage Schnapsidee, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

44. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to AB366653 (Ralstonia phage RSL1 DNA, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
agccggagccttcttggcggccgg	Protospacer
 ******************** *

45. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to LR743524 (Xylella phage Bacata genome assembly, chromosome: 1) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttcgcggcggc	Protospacer
 ************** *******.

46. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MT498062 (Microbacterium phage Leafus, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

47. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MG839030 (Microbacterium phage Balsa, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

48. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MH479922 (Microbacterium phage Redfield, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

49. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MG944216 (Microbacterium phage Pajaza, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

50. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MG944226 (Microbacterium phage Casey, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

51. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MG839024 (Microbacterium phage Peppino, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

52. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MG839025 (Microbacterium phage Raccoon, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

53. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NC_042345 (Phage Salvo, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttcgcggcggc	Protospacer
 ************** *******.

54. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MH045555 (Microbacterium phage BeeBee8, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

55. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MG944218 (Microbacterium phage Pikmin, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

56. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NC_042110 (Microbacterium phage Hamlet, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttggcgggagc	Protospacer
******************** .*.

57. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MT522003 (Microbacterium phage Rie18, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttcgcggcggc	Protospacer
 ************** *******.

58. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggcaccttcttggcggcggc	Protospacer
****** .***************.

59. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgcagcagccttcttggcggcggg	Protospacer
*** * *****************

60. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgcggcagccttcttggcggcggc	Protospacer
*** * *****************.

61. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggggccttcttcgcggcggt	Protospacer
 *****.******** ********

62. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggcgggagccttcttcgcggcggt	Protospacer
 ** *********** ********

63. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_CP022424 (Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgctggaaccttcttggcggcggg	Protospacer
***.***.***************

64. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_CP041653 (Streptomyces sp. RLB1-9 plasmid pRLB1-9.1, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggagccttcttcgcggcctt	Protospacer
*************** *****  *

65. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NC_006912 (Streptomyces sp. FQ1 plasmid pFP1, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggcgccttcttggcggccgg	Protospacer
****** ************** *

66. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_CP029602 (Streptomyces sp. WAC 01438 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggcgccttcttggcggccgg	Protospacer
****** ************** *

67. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_CP029602 (Streptomyces sp. WAC 01438 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccggcgccttcttggcggccgg	Protospacer
****** ************** *

68. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_CP032230 (Streptomyces seoulensis strain KCTC 9819 plasmid unnamed) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggcgtcttcttggcggcggt	Protospacer
 ***** *.***************

69. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MT818420 (Microbacterium phage Gilda, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttcgcagcggt	Protospacer
 ************** **.*****

70. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK737941 (Microbacterium phage Rachella, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttcgcagcggt	Protospacer
 ************** **.*****

71. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NC_048144 (Microbacterium phage Schubert, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccgtagccttcttggcggcagg	Protospacer
***** ***************.*

72. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK801732 (Microbacterium phage NarutoRun, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttcgcagcggt	Protospacer
 ************** **.*****

73. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NC_047986 (Microbacterium phage Krampus, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttcgcagcggt	Protospacer
 ************** **.*****

74. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK801731 (Microbacterium phage Anakin, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttcgcagcggt	Protospacer
 ************** **.*****

75. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MH271292 (Microbacterium phage AnnaSerena, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttcgcagcggt	Protospacer
 ************** **.*****

76. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MH588547 (Caulobacter phage CcrSC, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggggccttctgggcggcggt	Protospacer
 *****.******* *********

77. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK875791 (Gordonia phage Yakult, complete genome) position: , mismatch: 3, identity: 0.875

cgccggagccttcttggcggcggt	CRISPR spacer
cgccgctgccttcttggcggcggg	Protospacer
*****  ****************

78. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_CP050092 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b6, complete sequence) position: , mismatch: 4, identity: 0.833

cgccggagccttcttggcggcggt	CRISPR spacer
acccggagcctttttggcggcgga	Protospacer
  **********.**********

79. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_CP053440 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eF, complete sequence) position: , mismatch: 4, identity: 0.833

cgccggagccttcttggcggcggt	CRISPR spacer
acccggagcctttttggcggcgga	Protospacer
  **********.**********

80. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_CP048281 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248e, complete sequence) position: , mismatch: 4, identity: 0.833

cgccggagccttcttggcggcggt	CRISPR spacer
acccggagccgtcttggcggcgga	Protospacer
  ******** ************

81. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 4, identity: 0.833

cgccggagccttcttggcggcggt	CRISPR spacer
acccggagcctttttggcggcgga	Protospacer
  **********.**********

82. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NC_012848 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501, complete sequence) position: , mismatch: 4, identity: 0.833

cgccggagccttcttggcggcggt	CRISPR spacer
acccggagccctcttggcggcgga	Protospacer
  ********.************

83. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 4, identity: 0.833

cgccggagccttcttggcggcggt	CRISPR spacer
acccggagcctttttggcggcgga	Protospacer
  **********.**********

84. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 4, identity: 0.833

cgccggagccttcttggcggcggt	CRISPR spacer
acccagagccttcttggcggcgga	Protospacer
  **.******************

85. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MK894437 (Microbacterium phage MonChoix, complete genome) position: , mismatch: 4, identity: 0.833

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttggcgggagc	Protospacer
 ******************* .*.

86. spacer 9.1|6569518|24|NZ_CP041695|CRISPRCasFinder matches to MN062703 (Microbacterium phage McGalleon, complete genome) position: , mismatch: 4, identity: 0.833

cgccggagccttcttggcggcggt	CRISPR spacer
ggccggagccttcttggcgggagc	Protospacer
 ******************* .*.

87. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 5, identity: 0.833

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
ttccgccttctcctccagcgccgccttggc	Protospacer
 . ***********.**********.****

88. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 5, identity: 0.833

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
ttccgccttctcctccagcgccgccttggc	Protospacer
 . ***********.**********.****

89. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.833

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
ttccgccttctcctccagcgccgccttggc	Protospacer
 . ***********.**********.****

90. spacer 6.1|2653198|26|NZ_CP041695|CRISPRCasFinder matches to NC_011664 (Shewanella baltica OS223 plasmid pS22301, complete sequence) position: , mismatch: 5, identity: 0.808

aatgagtgcctgcaccggaatgagtg	CRISPR spacer
aatgagtgcttgaaccggaatgatat	Protospacer
*********.** **********

91. spacer 6.1|2653198|26|NZ_CP041695|CRISPRCasFinder matches to NC_015724 (Cupriavidus necator N-1 plasmid pBB2, complete sequence) position: , mismatch: 5, identity: 0.808

aatgagtgcctgcaccggaatgagtg	CRISPR spacer
aatgagttcctgcaccggaatctgca	Protospacer
******* *************  *..

92. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 6, identity: 0.8

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
cggcgccttcgcctacagcgccgccctgcg	Protospacer
  ******** *** *************

93. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NC_022049 (Paracoccus aminophilus JCM 7686 plasmid pAMI4, complete sequence) position: , mismatch: 6, identity: 0.8

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
gcgcgccttctcctccagcgccgcgatcat	Protospacer
**************.*********  * ..

94. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 6, identity: 0.8

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
ttcggccttctcctccagcgccgccttggc	Protospacer
 .  **********.**********.****

95. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 6, identity: 0.8

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
gcgcgccttcggcttcagcgccgcgcagcg	Protospacer
**********  ************ * *

96. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 6, identity: 0.8

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
gcgcgccttcggcttcagcgccgcgcagcg	Protospacer
**********  ************ * *

97. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to MT498058 (Gordonia phage Clawz, complete genome) position: , mismatch: 6, identity: 0.8

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
cggctccttctccttcagcgccgacccgtc	Protospacer
  ** ****************** **.* *

98. spacer 11.1|7554074|29|NZ_CP041695|CRISPRCasFinder matches to NZ_CP014516 (Frondihabitans sp. PAMC 28766 strain SR6 plasmid 3, complete sequence) position: , mismatch: 6, identity: 0.793

ctgtctgcgctggtgttccgtcgtagctt	CRISPR spacer
ctgtcggcgctgctgttccgtcgccgcgg	Protospacer
***** ****** **********. **

99. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP042276 (Agrobacterium tumefaciens strain 186 plasmid pAt, complete sequence) position: , mismatch: 7, identity: 0.767

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
caatgccttctccttcggcgtcgccctggg	Protospacer
  ..************.***.********

100. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP025432 (Paracoccus zhejiangensis strain J6 plasmid pPZ02, complete sequence) position: , mismatch: 7, identity: 0.767

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
cagcgcctcctccttcagcgccgcatcgcc	Protospacer
  ******.*************** ..* *

101. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 7, identity: 0.767

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
cggcgccttctcctccagcgccacccagca	Protospacer
  ************.*******.*** *

102. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 7, identity: 0.767

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
aagcgccttctcctgcagcgccgcaagcgc	Protospacer
. ************ *********    **

103. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 7, identity: 0.767

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
cggcgccttctcctccagcgccacccagca	Protospacer
  ************.*******.*** *

104. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
cgatgccttctcgttcagcgccgccgtatc	Protospacer
  ..******** ************ *. *

105. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
cgatgccttctcgttcagcgccgccgtatc	Protospacer
  ..******** ************ *. *

106. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP025114 (Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
gcgcgccttctgcttcagcgcttcgagcga	Protospacer
*********** *********. *    *

107. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.733

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
gattgccttcgccttcagctccgccctcta	Protospacer
*  .****** ******** *******

108. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
caggcccttgtccttcagcgccgcccagaa	Protospacer
  *  **** **************** *.

109. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP044544 (Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence) position: , mismatch: 8, identity: 0.733

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
gcgcgccttctgcttcagcgcttcgagcga	Protospacer
*********** *********. *    *

110. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP012918 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p4, complete sequence) position: , mismatch: 8, identity: 0.733

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
gattgccttcgccttcagctccgccctcta	Protospacer
*  .****** ******** *******

111. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.7

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
ctgcgcgttctccttctgcgccgccaccag	Protospacer
 .**** ********* ******** . .

112. spacer 3.1|848163|30|NZ_CP041695|CRISPRCasFinder matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gcgcgccttctccttcagcgccgccctggc	CRISPR spacer
ccgcgccatttccttcagcgccgcgacacg	Protospacer
 ****** *.**************  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5107524 : 5168470

Bacillus_virus(27.27%)

protease,tRNA,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_143982263.1\|5107524_5110215_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	5.7e-141	38.7
WP_143982264.1\|5110425_5111454_-	FAD-binding protein	G3MA85	Bacillus_virus	3.8e-05	22.7
WP_143984268.1\|5111695_5112313_+	ATP-binding protein	NA	NA	NA	NA
WP_143984269.1\|5112501_5113479_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_143982265.1\|5113487_5114699_+	saccharopine dehydrogenase	NA	NA	NA	NA
WP_143984270.1\|5114851_5115673_+	transcriptional regulator	NA	NA	NA	NA
WP_143984272.1\|5115763_5116663_-	hypothetical protein	NA	NA	NA	NA
WP_143984271.1\|5116698_5118276_-	FAD-binding protein	NA	NA	NA	NA
WP_143982266.1\|5118394_5118979_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_143982267.1\|5119004_5120543_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_143982268.1\|5120568_5121405_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_143982269.1\|5121469_5121892_-	hypothetical protein	NA	NA	NA	NA
WP_143982270.1\|5124137_5127167_-	FHA domain-containing protein	NA	NA	NA	NA
WP_143982271.1\|5127185_5129039_-	protein kinase	A0A1B1IUU3	uncultured_Mediterranean_phage	8.2e-22	32.8
WP_143982272.1\|5129035_5130322_-\|tail	lamin tail domain-containing protein	NA	NA	NA	NA
WP_143982273.1\|5130318_5130801_-	hypothetical protein	NA	NA	NA	NA
WP_143982274.1\|5131900_5134225_+	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA
WP_143982275.1\|5134217_5135054_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_039811187.1\|5135128_5135497_+	steroid Delta-isomerase	NA	NA	NA	NA
WP_143984273.1\|5135632_5136157_+	hypothetical protein	NA	NA	NA	NA
WP_143982276.1\|5136484_5137060_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_143984274.1\|5137152_5138436_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	6.7e-140	60.1
WP_029927069.1\|5138721_5139399_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A248SJ97	Salicola_phage	1.4e-27	39.1
WP_029927067.1\|5139436_5140018_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	4.0e-44	50.0
WP_143982277.1\|5140206_5141601_-	trigger factor	NA	NA	NA	NA
WP_143982278.1\|5141733_5142300_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_143982279.1\|5142466_5143978_+	3' terminal RNA ribose 2'-O-methyltransferase Hen1	NA	NA	NA	NA
WP_143982280.1\|5143974_5146749_+	polynucleotide kinase-phosphatase	A0A2L0UZN4	Agrobacterium_phage	1.3e-23	26.0
WP_143982281.1\|5146809_5147283_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_143982282.1\|5147438_5148218_+	hypothetical protein	NA	NA	NA	NA
WP_143984275.1\|5149408_5150383_+	diguanylate cyclase	G3MA91	Bacillus_virus	4.1e-17	31.7
WP_143982283.1\|5150443_5151280_+	DUF1542 domain-containing protein	NA	NA	NA	NA
WP_143982284.1\|5151304_5151910_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_143982285.1\|5151972_5153304_+	amidohydrolase family protein	NA	NA	NA	NA
WP_143982286.1\|5153332_5154145_-	Fpg/Nei family DNA glycosylase	A0A1V0CNR6	Kaumoebavirus	2.0e-09	26.9
WP_029927041.1\|5154250_5154724_-	ribose-5-phosphate isomerase	NA	NA	NA	NA
WP_143982287.1\|5156332_5157001_-	DsbA family protein	NA	NA	NA	NA
WP_143982288.1\|5157126_5158347_+	FAD-binding protein	NA	NA	NA	NA
WP_143982289.1\|5158453_5158855_+	hypothetical protein	NA	NA	NA	NA
WP_143982290.1\|5158867_5160202_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_143984276.1\|5160210_5161152_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_143982291.1\|5161264_5161948_+	NAD(P)H oxidoreductase	NA	NA	NA	NA
WP_143982292.1\|5162007_5162874_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	5.3e-40	35.2
WP_143982293.1\|5162961_5165550_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	1.0e-46	34.4
WP_143982294.1\|5165811_5166429_-	pyridoxamine 5-phosphate oxidase	NA	NA	NA	NA
WP_143982295.1\|5166508_5167054_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_143982296.1\|5167283_5167886_+\|protease	ATP-dependent Clp protease proteolytic subunit	NA	NA	NA	NA
WP_143982297.1\|5167882_5168470_+\|protease	ATP-dependent Clp protease proteolytic subunit	NA	NA	NA	NA

DBSCAN-SWA_2

6799228 : 6807205

Mycobacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_143983274.1\|6799228_6800233_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.9e-71	45.3
WP_029930390.1\|6800658_6801357_+	hypothetical protein	NA	NA	NA	NA
WP_143983275.1\|6801422_6802409_-	alpha/beta hydrolase fold domain-containing protein	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	1.1e-17	26.2
WP_143983276.1\|6802655_6803555_+	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	2.6e-90	56.9
WP_143983277.1\|6803557_6804124_+	dTDP-4-keto-6-deoxy-D-glucose epimerase	H9NC63	Sphingomonas_phage	2.1e-13	36.2
WP_143983278.1\|6804518_6805664_-	alpha/beta fold hydrolase	A0A249XU20	Mycobacterium_phage	1.3e-09	27.1
WP_143983279.1\|6805738_6807205_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	1.5e-55	34.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP041695

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection