CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP041737	Enterobacter hormaechei subsp. steigerwaltii strain ME-1 plasmid pME-1d, complete sequence	0 crisprs	NA	0	0
NZ_CP041734	Enterobacter hormaechei subsp. steigerwaltii strain ME-1 plasmid pME-1a, complete sequence	0 crisprs	csa3	0	3
NZ_CP041735	Enterobacter hormaechei subsp. steigerwaltii strain ME-1 plasmid pME-1b, complete sequence	0 crisprs	NA	0	0
NZ_CP041733	Enterobacter hormaechei subsp. steigerwaltii strain ME-1 chromosome, complete genome	2 crisprs	DEDDh,WYL,csa3,RT,DinG,cas3	1	5
NZ_CP041736	Enterobacter hormaechei subsp. steigerwaltii strain ME-1 plasmid pME-1c, complete sequence	0 crisprs	NA	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

59136 : 102104

Acinetobacter_phage(20.0%)

protease,transposase,integrase

attL 58671:58684|attR 109995:110008

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
58671:58684	attL	NA	NA	NA	NA
WP_000795949.1\|59136_60312_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_001285422.1\|60481_60694_+	hypothetical protein	NA	NA	NA	NA
WP_001232447.1\|61054_62137_+	hypothetical protein	NA	NA	NA	NA
WP_001284318.1\|62302_63802_-	kinase	NA	NA	NA	NA
WP_107535687.1\|63827_65465_-	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_001253656.1\|65464_66505_-	VWA domain-containing protein	NA	NA	NA	NA
WP_001253658.1\|66589_67228_-	VWA domain-containing protein	NA	NA	NA	NA
WP_000116681.1\|67227_67869_-	TerD family protein	NA	NA	NA	NA
WP_001253657.1\|67891_68530_-	VWA domain-containing protein	NA	NA	NA	NA
WP_001176767.1\|68992_69460_-	tellurium resistance protein TerW	NA	NA	NA	NA
WP_011152964.1\|69477_70686_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_011152965.1\|70696_71653_-	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_001585166.1\|71652_72732_-\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	2.8e-38	34.1
WP_001040058.1\|72733_73507_-	hypothetical protein	NA	NA	NA	NA
WP_001280115.1\|73499_74642_-	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	6.5e-30	34.5
WP_012695441.1\|74651_75710_-	hypothetical protein	NA	NA	NA	NA
WP_000254137.1\|76030_76612_+	tellurium resistance-associated protein TerZ	K4JRX3	Caulobacter_phage	6.3e-13	30.0
WP_044704557.1\|76611_77769_+	tellurium resistance protein TerA	NA	NA	NA	NA
WP_000007449.1\|77791_78247_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_000255079.1\|78269_79310_+	tellurium resistance membrane protein TerC	K7QKE8	Escherichia_phage	2.2e-77	48.0
WP_000116680.1\|79358_79937_+	tellurium resistance membrane protein TerD	A0A2P1N0L4	Streptomyces_phage	2.5e-06	40.0
WP_000301247.1\|80005_80581_+	TerD family protein	K4JRX3	Caulobacter_phage	8.7e-31	41.6
WP_001053340.1\|81009_82251_+	tellurium resistance protein TerF	NA	NA	NA	NA
WP_000374058.1\|82341_82797_+	hypothetical protein	NA	NA	NA	NA
WP_000398479.1\|83037_83229_-	hypothetical protein	NA	NA	NA	NA
WP_001151572.1\|83320_83662_-	hypothetical protein	NA	NA	NA	NA
WP_000880375.1\|84648_84903_+	hypothetical protein	NA	NA	NA	NA
WP_000166877.1\|84905_86945_-	ATP-dependent helicase	E3T5J8	Cafeteria_roenbergensis_virus	1.7e-25	25.3
WP_000211823.1\|86941_87928_-	hypothetical protein	NA	NA	NA	NA
WP_000341066.1\|88848_89241_+	hypothetical protein	NA	NA	NA	NA
WP_012695443.1\|89219_89531_+	hypothetical protein	NA	NA	NA	NA
WP_000462754.1\|89899_90556_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_123906519.1\|90595_90778_+	hypothetical protein	NA	NA	NA	NA
WP_000340139.1\|90758_91256_+	membrane protein	NA	NA	NA	NA
WP_012695445.1\|91260_92649_+	hypothetical protein	NA	NA	NA	NA
WP_012477377.1\|93049_93343_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000088044.1\|93347_94673_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_000134171.1\|94733_94940_+	hypothetical protein	NA	NA	NA	NA
WP_000985909.1\|95040_95451_+	hypothetical protein	NA	NA	NA	NA
WP_001805097.1\|95463_95988_+	hypothetical protein	NA	NA	NA	NA
WP_000427623.1\|96169_97174_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_001138073.1\|97252_100225_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
WP_001162012.1\|100227_100785_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
WP_001447826.1\|100822_101146_-	hypothetical protein	NA	NA	NA	NA
WP_000845054.1\|101090_102104_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	6.1e-72	45.5
109995:110008	attR	NA	NA	NA	NA

DBSCAN-SWA_2

105717 : 142658

Escherichia_phage(33.33%)

transposase,integrase

attL 112412:112471|attR 133927:135060

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032492010.1\|105717_106761_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000679427.1\|106983_107331_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|107324_108164_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000050481.1\|108568_110110_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_012579084.1\|110373_111030_+	quinolone resistance pentapeptide repeat protein QnrA1	NA	NA	NA	NA
WP_004193231.1\|111215_112091_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_025999322.1\|112094_112460_-	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA
WP_052238321.1\|112352_112688_+	ethidium bromide resistance protein	NA	NA	NA	NA
112412:112471	attL	NA	NA	NA	NA
WP_000259031.1\|112681_113521_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_001993321.1\|113450_113630_-	hypothetical protein	NA	NA	NA	NA
WP_000376623.1\|113648_114149_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001297012.1\|114454_114568_-	hypothetical protein	NA	NA	NA	NA
WP_001389365.1\|114655_115420_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_021242992.1\|115594_115813_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_001446012.1\|115775_115895_+	hypothetical protein	NA	NA	NA	NA
WP_001087807.1\|115878_116115_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001277466.1\|116111_116477_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000209296.1\|116494_118180_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
WP_000522996.1\|118218_118644_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_000732275.1\|118671_118947_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001294656.1\|118962_119328_-	mercuric ion transporter MerT	NA	NA	NA	NA
WP_001166628.1\|119399_119855_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001194554.1\|120590_120794_+	hypothetical protein	NA	NA	NA	NA
WP_001287391.1\|121135_121540_-	H-NS histone family protein	NA	NA	NA	NA
WP_001100635.1\|121717_122011_-	hypothetical protein	NA	NA	NA	NA
WP_000175475.1\|122036_122273_-	hypothetical protein	NA	NA	NA	NA
WP_000916941.1\|122313_122769_-	hypothetical protein	NA	NA	NA	NA
WP_001447900.1\|122828_123494_-	hypothetical protein	NA	NA	NA	NA
WP_001371925.1\|123551_123932_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|127841_128546_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067855.1\|129154_129859_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_015057121.1\|129749_130709_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.7e-47	40.5
WP_032490158.1\|130864_131338_+	trimethoprim-resistant dihydrofolate reductase DfrA16	G3MBI7	Bacillus_virus	1.4e-18	30.8
WP_001261740.1\|131442_132234_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_144428063.1\|132364_132796_+	trimethoprim-resistant dihydrofolate reductase DfrA	A0A1B4XX05	Tenacibaculum_phage	6.7e-12	35.2
WP_001261740.1\|132900_133692_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000679427.1\|133855_134203_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|134196_135036_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000050481.1\|135440_136982_+\|transposase	IS91 family transposase	NA	NA	NA	NA
133927:135060	attR	NA	NA	NA	NA
WP_032489926.1\|137308_138184_+	class A extended-spectrum beta-lactamase CTX-M-9	A0A1B0VBP7	Salmonella_phage	2.3e-152	99.3
WP_144428061.1\|138647_139187_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_044704969.1\|139923_141546_-	MCR-9 family phosphoethanolamine--lipid A transferase	NA	NA	NA	NA
WP_001572374.1\|141734_142658_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.4e-176	99.3

DBSCAN-SWA_3

156684 : 161953

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000927306.1\|156684_158163_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	7.3e-199	74.4
WP_001066652.1\|158181_159009_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	4.9e-43	37.2
WP_000065802.1\|159068_159494_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.6e-50	70.7
WP_000922628.1\|159506_160796_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	9.9e-168	71.4
WP_000941305.1\|160841_161162_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	1.7e-20	53.7
WP_000130816.1\|161248_161953_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	8.8e-86	72.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP041733

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041733_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041733_1

1380788-1381064

Orphan

Consensus_repeat	Method
GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP041733_1

>merge|NZ_CP041733|1|1380788-1381064|PILER-CR
GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTTATTGGTTCCGAGTGATAATTCAGGCAACACCCGAACGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAGCCTGAATAGATTTGAAGTACATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGG

>NZ_CP041733|1|1|1380788-1381064|PILER-CR
GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGG	TTCGAATCCTGCACGACCCACCAATTTTATTGGTTCCGAGTGATAATTCAGGCAACACCCGAAC
GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGG	TTCGAATCCTGCACGACCCACCAGCCTGAATAGATTTGAAGTACATCCCGCAAG
GGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041733.1\|WP_003858593.1\|1374907_1375312_+\|tol-pal-system-associated-acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|182742
NZ_CP041733.1\|WP_047732942.1\|1376461_1377697_+\|cell-envelope-integrity-protein-TolA	unknown	unknown	gnl\|CDD\|236545
NZ_CP041733.1\|WP_023303309.1\|1373201_1374341_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|184965
NZ_CP041733.1\|WP_017384960.1\|1381317_1382361_+\|quinolinate-synthase-NadA	unknown	unknown	gnl\|CDD\|236489
NZ_CP041733.1\|WP_017384957.1\|1384149_1384509_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372863
NZ_CP041733.1\|WP_017384962.1\|1377797_1379090_+\|Tol-Pal-system-protein-TolB	unknown	unknown	gnl\|CDD\|235143
NZ_CP041733.1\|WP_017694131.1\|1382383_1383103_+\|nicotinamide-riboside-transporter-PnuC	unknown	unknown	gnl\|CDD\|185295
NZ_CP041733.1\|WP_003858578.1\|1379124_1379646_+\|peptidoglycan-associated-lipoprotein-Pal	unknown	unknown	gnl\|CDD\|182744
NZ_CP041733.1\|WP_126804855.1\|1387982_1389131_-\|galactokinase	unknown	unknown	gnl\|CDD\|179937
NZ_CP041733.1\|WP_003858596.1\|1374468_1374759_+\|cyd-operon-protein-YbgE	unknown	unknown	gnl\|CDD\|236721
NZ_CP041733.1\|WP_003858589.1\|1376004_1376433_+\|colicin-uptake-protein-TolR	unknown	unknown	gnl\|CDD\|236824
NZ_CP041733.1\|WP_033486389.1\|1386945_1387989_-\|galactose-1-epimerase	unknown	unknown	gnl\|CDD\|182931
NZ_CP041733.1\|WP_144427710.1\|1383099_1384050_-\|CDF-family-zinc-transporter-ZitB	unknown	unknown	gnl\|CDD\|235130
NZ_CP041733.1\|WP_017694127.1\|1389134_1390181_-\|galactose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|236963
NZ_CP041733.1\|WP_006809557.1\|1385927_1386680_-\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|184516
NZ_CP041733.1\|WP_003858598.1\|1374355_1374469_+\|cytochrome-bd-I-oxidase-subunit-CydX	unknown	unknown	gnl\|CDD\|227227
NZ_CP041733.1\|WP_003858564.1\|1384813_1385866_+\|3-deoxy-7-phosphoheptulonate-synthase-AroG	unknown	unknown	gnl\|CDD\|236435
NZ_CP041733.1\|WP_003858554.1\|1390190_1391207_-\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|182639
NZ_CP041733.1\|WP_045350538.1\|1379655_1380444_+\|cell-division-protein-CpoB	unknown	unknown	gnl\|CDD\|182745
NZ_CP041733.1\|WP_003858590.1\|1375308_1376001_+\|Tol-Pal-system-protein-TolQ	unknown	unknown	gnl\|CDD\|182743

Protein	Function_ID	Function_description	E-value
NZ_CP041733.1\|WP_003858593.1\|1374907_1375312_+\|tol-pal-system-associated-acyl-CoA-thioesterase	gnl\|CDD\|182742	PRK10800, PRK10800, acyl-CoA thioesterase YbgC; Provisional.	1.00309e-89
NZ_CP041733.1\|WP_047732942.1\|1376461_1377697_+\|cell-envelope-integrity-protein-TolA	gnl\|CDD\|236545	PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional.	2.35408e-56
NZ_CP041733.1\|WP_023303309.1\|1373201_1374341_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|184965	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II.	0
NZ_CP041733.1\|WP_017384960.1\|1381317_1382361_+\|quinolinate-synthase-NadA	gnl\|CDD\|236489	PRK09375, PRK09375, quinolinate synthase NadA.	0
NZ_CP041733.1\|WP_017384957.1\|1384149_1384509_-\|hypothetical-protein	gnl\|CDD\|372863	pfam13985, YbgS, YbgS-like protein. This family of proteins is functionally uncharacterized. The family includes the YbgS protein from E. coli. This family of proteins is found in bacteria. Proteins in this family are approximately 130 amino acids in length. Some members of this family are annotated as homeobox protein, but this annotation cannot be verified.	1.46731e-29
NZ_CP041733.1\|WP_017384962.1\|1377797_1379090_+\|Tol-Pal-system-protein-TolB	gnl\|CDD\|235143	PRK03629, tolB, Tol-Pal system protein TolB.	0
NZ_CP041733.1\|WP_017694131.1\|1382383_1383103_+\|nicotinamide-riboside-transporter-PnuC	gnl\|CDD\|185295	PRK15397, PRK15397, nicotinamide riboside transporter PnuC; Provisional.	1.37815e-169
NZ_CP041733.1\|WP_003858578.1\|1379124_1379646_+\|peptidoglycan-associated-lipoprotein-Pal	gnl\|CDD\|182744	PRK10802, PRK10802, peptidoglycan-associated lipoprotein Pal.	1.38395e-116
NZ_CP041733.1\|WP_126804855.1\|1387982_1389131_-\|galactokinase	gnl\|CDD\|179937	PRK05101, PRK05101, galactokinase; Provisional.	0
NZ_CP041733.1\|WP_003858596.1\|1374468_1374759_+\|cyd-operon-protein-YbgE	gnl\|CDD\|236721	PRK10588, PRK10588, hypothetical protein; Provisional.	2.79913e-55
NZ_CP041733.1\|WP_003858589.1\|1376004_1376433_+\|colicin-uptake-protein-TolR	gnl\|CDD\|236824	PRK11024, PRK11024, colicin uptake protein TolR; Provisional.	1.31294e-95
NZ_CP041733.1\|WP_033486389.1\|1386945_1387989_-\|galactose-1-epimerase	gnl\|CDD\|182931	PRK11055, galM, galactose-1-epimerase; Provisional.	0
NZ_CP041733.1\|WP_144427710.1\|1383099_1384050_-\|CDF-family-zinc-transporter-ZitB	gnl\|CDD\|235130	PRK03557, PRK03557, CDF family zinc transporter ZitB.	0
NZ_CP041733.1\|WP_017694127.1\|1389134_1390181_-\|galactose-1-phosphate-uridylyltransferase	gnl\|CDD\|236963	PRK11720, PRK11720, UDP-glucose--hexose-1-phosphate uridylyltransferase.	0
NZ_CP041733.1\|WP_006809557.1\|1385927_1386680_-\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	gnl\|CDD\|184516	PRK14115, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase.	0
NZ_CP041733.1\|WP_003858598.1\|1374355_1374469_+\|cytochrome-bd-I-oxidase-subunit-CydX	gnl\|CDD\|227227	COG4890, COG4890, Predicted outer membrane lipoprotein [Function unknown].	5.94507e-11
NZ_CP041733.1\|WP_003858564.1\|1384813_1385866_+\|3-deoxy-7-phosphoheptulonate-synthase-AroG	gnl\|CDD\|236435	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated.	0
NZ_CP041733.1\|WP_003858554.1\|1390190_1391207_-\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|182639	PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional.	0
NZ_CP041733.1\|WP_045350538.1\|1379655_1380444_+\|cell-division-protein-CpoB	gnl\|CDD\|182745	PRK10803, PRK10803, tol-pal system protein YbgF; Provisional.	3.55156e-165
NZ_CP041733.1\|WP_003858590.1\|1375308_1376001_+\|Tol-Pal-system-protein-TolQ	gnl\|CDD\|182743	PRK10801, PRK10801, Tol-Pal system protein TolQ.	9.08981e-166

>NZ_CP041733.1|WP_045350538.1|1379655_1380444_+|cell-division-protein-CpoB
MSSNFRHHLMSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQLERISNAHSQLLTQLQQQLSDNQNDIDSLRGQIQESQYQLNQVVERQKQILLQMDSLNSGGAAAQPAAGDQSGAATPAPAADASASSGAPVQSGDANTDYNAAIALVQDKSRQEDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAFYFASVVKNYPKSPKAPDAMYKVGVIMQDKGDTAKAKAVYQQVVAKFPGTDGAKQAQKRLSSMG
>NZ_CP041733.1|WP_003858578.1|1379124_1379646_+|peptidoglycan-associated-lipoprotein-Pal
MQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMMGAGTGMDANGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVY
>NZ_CP041733.1|WP_017384962.1|1377797_1379090_+|Tol-Pal-system-protein-TolB
MKQALRLAFGFLVLLTSAVHATVSIDITDWNDSARPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQQPGTAQEVQPAAWSALGIDAVVVGQVTPAPDGGYNVAYQLVDTGGAPGTVLAQNTYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFTVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLSNGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAAQRITWEGSQNQDADVSADGKTMVMVSTAGGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSPYL
>NZ_CP041733.1|WP_047732942.1|1376461_1377697_+|cell-envelope-integrity-protein-TolA
MSKATEQNDKLKRAIIVSAVLHVILFAALIWSSFDEHLDASGGGGGSSIDAVMVDPGAIVQNYNRQQQQQASSKRAEEQREKQAQQQAEELREKQAAEQERLKQLEKERLQAQEAAKEQAEQQKQAEAAAKKAQEQQKQAEEAAAKAAADAKAQADAQAKLAADAAKKAAADAQKKAEAEAAKKAAADAQKKAEAEAAKKAAQEAEKKAAADAAKKAAAAEKAAAEKAAAAEKAAADKKAAAEKAAAAKKAAAEKAAADKKAAAEKAAARKAAAEKAAAEAATADDIIGDLSSGKNAPKTGGGAKGSNAAPAGSGNTKNNGASGAEINDYKNQIAAAISSRLNDKSLYTGKTCRLHIKLHTDGTVLSVESEGGDDALCQAALVAVNQAKLPKPPSQAVYEVFKDASLNFKP
>NZ_CP041733.1|WP_003858589.1|1376004_1376433_+|colicin-uptake-protein-TolR
MARSRGRGRRELKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSTNDDPPVIIEVSGVGQYSVVVEKDRMDQLPPEQVIAEAQRRLESNPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI
>NZ_CP041733.1|WP_003858590.1|1375308_1376001_+|Tol-Pal-system-protein-TolQ
MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAGREAEAFEDKFWSGIELSRLYQESQGRRDNLSGSEQIFYSGFKEFARLHRANSHAPEAVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTSTESNKG
>NZ_CP041733.1|WP_003858593.1|1374907_1375312_+|tol-pal-system-associated-acyl-CoA-thioesterase
MNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQVLLAERVAFVVRKMTLEYFAPARLDDMLEVQTEITSMRGTSLVFTQRIVNAENTVLNSAEVLIVCVDPTIMKPRALPKSIVAEFKQ
>NZ_CP041733.1|WP_003858596.1|1374468_1374759_+|cyd-operon-protein-YbgE
MNIIATLYAVMDKRPLRALSLIMALLLAGCIFWDPSRFAAKTSELEIWHGFLIMWAVCAGVIHGVGFRPKALHWQGIFCPLIADLVLLAGLIFFFF
>NZ_CP041733.1|WP_003858598.1|1374355_1374469_+|cytochrome-bd-I-oxidase-subunit-CydX
MWYFAWILGTLLACAFGVITALALEHVEATKAGEEKH
>NZ_CP041733.1|WP_023303309.1|1373201_1374341_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MIDYEVLRFIWWLLIGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEDTRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFHVDEYMRLFYTGNFFQLLNPFGLLAGVVSVAMIITQGATYLQMRTVGELHLRSRATAQVAALVTLVCFALAGVWVVYGIDGYVVTSAINHAAPSNPLTKEVARQAGAWLVNFNNTPVLWAIPALGVLLPLLTVLTSRLEKGALAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSHMTLNLMTYVACVFVPIVLAYTIWCYWKMFGRITKEHIESNTHSMY
>NZ_CP041733.1|WP_017384960.1|1381317_1382361_+|quinolinate-synthase-NadA
MSVMFDPETAIYPFPPKPAPLSRDEKQFYREKIKRLLKERDAVMVAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEKTILMPTLNAECSLDLGCPIDEFTAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAVELIEHLDSLGEKIIWAPDRHLGNYVQKQTGADVLCWQGACIVHDEFKTQALTRMRGLYPDAAILVHPESPQSIVDMADAVGSTSQLIHAAKTLSHKQLIVATDRGIFYKMQQAVPEKTLLEAPTAGEGATCRSCAHCPWMAMNGLKAIAEGLENGGAAHEIHVDAALREGALIPLNRMLDFAATLRT
>NZ_CP041733.1|WP_017694131.1|1382383_1383103_+|nicotinamide-riboside-transporter-PnuC
MDFFSTQNILVHIPIGAGGYDLSWIEAVGTLAGLLCIWLASLEKISNYAFGLINVTLFAIIFFQIQLYASLLLQLFFFAANIYGWYAWSRQNSQQEAELQIRWLPLPKAITWFAACVVAIGFMTVFIDPVFAFLTRVAVSVMSGLGLNVTMPELQPDAFPFWDSCMMVLSIAAMILMTRKYVENWLLWVVINVISVVIFARQGVYAMSLEYMLLTVIALNGSRMWINSARERGSRALSR
>NZ_CP041733.1|WP_144427710.1|1383099_1384050_-|CDF-family-zinc-transporter-ZitB
MAHSHSHSHSHSHSTGDENAKRLLLAFGVTATFMIIEVTGGLISGSLALLADAGHMLTDAAALLFALLAVQFARRPPNTRHTFGWLRLTTLAAFVNAIALVVITLLIVWEAFQRFRHPQPIAGTTMMVIAIAGLVANILAFWILHRGSSEKNLNVRAAALHVLGDLLGSVGAIVAALIIMGTGWTPIDPILSVLVSCLVLRSAWRLLKESVNELLEGAPTSLDIGELKRNLCRSIPEVRNVHHVHVWLVGEKPLMTLHVQVIPPHDHDALLERIRHFLEHHYEIAHATIQMEYQPCNGPDCHLNEAQSGHSHAHHH
>NZ_CP041733.1|WP_017384957.1|1384149_1384509_-|hypothetical-protein
MKMTKLTTLFLTATLTLASGSVLAADAGSSGSNGDANAAAEAGQVAPDAKQNIAPNNVDNSNINTGNTNTGGTSTGTMNHEGMTTDEVHKNSVCKDGKCPDPNDKVGSDANTKTDGTTQ
>NZ_CP041733.1|WP_003858564.1|1384813_1385866_+|3-deoxy-7-phosphoheptulonate-synthase-AroG
MNYQNDDLRIKEINELLPPVALLEKFPATENAANTVSHARKAIHKILKGSDDRLLVVIGPCSIHDPAAAKEYASRLLALREELKGELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLEINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKAGLEKAGLAPQVMIDFSHANSSKQFKKQMEVGADVCQQIASGERAVIGVMIESHLVEGNQNLEGSEPLVYGKSVTDACIGWDDTDAILRQLADAVKARRG
>NZ_CP041733.1|WP_006809557.1|1385927_1386680_-|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase
MANTKLVLVRHGESQWNNENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGFTFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELSKDDERYPGHDPRYAKLTEAELPQTESLALTIDRVVPYWNETILPRLKSGERVIIAAHGNSLRALVKYLDNMGEDEILELNIPTGVPLVYEFDENFKPVKHYYLGNADEIAAKAAAVANQGKAK
>NZ_CP041733.1|WP_033486389.1|1386945_1387989_-|galactose-1-epimerase
MLNETPTLAPDGLPYRLLTLRNSAGMVVTLMDWGATLLSARVPMPDGSVRETLLGCASPEQYIEQTAFLGASIGRYANRIARSRFTMDGVTYSLLASQGENQLHGGPEGFDKRRWKIVQQNDGEVWFSLDSLDGDQGFPGNLTATARFTLTEDNRIAIEYRATVDKPCPVNLTNHAYFNLDGNQTDVRSHKLQILADEYLPVDEMGIPYQGLKPVSGNSFDFRQPKTIAQDFLSDDDQRKVKGYDHAFLLQAKGDLSQPAAQVWSADEKLQMTVYTTAPALQFYSGNYLEGTTAREHDAYGAWQGLALESEFLPDTPNHPEWPQPDCVLRPGEEYVSVTEYHFIPRA
>NZ_CP041733.1|WP_126804855.1|1387982_1389131_-|galactokinase
MSLKDKTQSLFAEKFGYPATHVIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAKRDDRHVRVIAADYGNEIDEFSLDAPIVPHDSQQWSNYVRGVVKHLQKRNKNFGGADLVISGNVPQGAGLSSSASLEVAVGTVFQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKEHALLIDCRSLGTKAVPLPKGAAVVIINSNFKRTLVGSEYNTRREQCETGARFFQQPALRDVSLDEFNKVAHELDPVVTKRVRHILTENARTVEAASALAKGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKATIGDKGGVRMTGGGFGGCVVALVPEELVPAIQDAVAKQYEAKTGIKETFYVCKASQGAGQC
>NZ_CP041733.1|WP_017694127.1|1389134_1390181_-|galactose-1-phosphate-uridylyltransferase
MTQFNPVDHPHRRFNPLSGQWILVSPHRAKRPWQGAQETPAKQTLPQHDPDCFLCPGNTRVTGDKNPDYQGTFVFTNDFAALMTDTPDAPESHDPLMRCESARGTSRVICFSPDHSKTLPELSVEALKEVVSTWQAQTAELGQSYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAEREDRLQKAYFTQNGSPMLVDYTQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVQRITELSDAQRDDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDVHYRESGV
>NZ_CP041733.1|WP_003858554.1|1390190_1391207_-|UDP-glucose-4-epimerase-GalE
MRVLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNSKRSVLPVIERLSGKQPTFVEGDIRNEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMQQLADKPGVHIYNLGAGIGSSVLDVVNAFSKACGKPVKYHFAPRRDGDLPAYWADATKADKELNWRVTRTLDEMAQDTWHWQSRHPQGYPD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP041733_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041733_2

1561743-1561831

Orphan

I-F

Consensus_repeat	Method
GTTCACTGCCGGGCAGGCAGCTTAGAAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041733_2

>merge|NZ_CP041733|2|1561743-1561831|CRISPRCasFinder
GTTCACTGCCGGGCAGGCAGCTTAGAAATACGGCGACACCGACACGCGCCAGCGTGTTTTGTTCACTGCCGGGCAGGCAGCTTAGAAAT

>NZ_CP041733|2|1|1561743-1561831|CRISPRCasFinder
GTTCACTGCCGGGCAGGCAGCTTAGAAAT	ACGGCGACACCGACACGCGCCAGCGTGTTTT
GTTCACTGCCGGGCAGGCAGCTTAGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041733.1\|WP_015570991.1\|1558704_1559706_-\|low-specificity-L-threonine-aldolase	unknown	unknown	gnl\|CDD\|236710
NZ_CP041733.1\|WP_017384852.1\|1556151_1557165_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528
NZ_CP041733.1\|WP_144427722.1\|1554193_1556005_+\|PKD-domain-containing-protein	unknown	unknown	gnl\|CDD\|381595
NZ_CP041733.1\|WP_026080729.1\|1566191_1566887_-\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP041733.1\|WP_015570984.1\|1571061_1573002_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP041733.1\|WP_144427721.1\|1550813_1553516_+\|PKD-domain-containing-protein	unknown	unknown	gnl\|CDD\|119365
NZ_CP041733.1\|WP_017693710.1\|1562339_1563308_-\|NADH-oxidoreductase	unknown	unknown	gnl\|CDD\|236735
NZ_CP041733.1\|WP_045341351.1\|1549279_1549765_+\|type-II-secretion-system-protein-M	unknown	unknown	gnl\|CDD\|377391
NZ_CP041733.1\|WP_032653116.1\|1557257_1558694_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187556
NZ_CP041733.1\|WP_126804874.1\|1548149_1549283_+\|type-II-secretion-system-protein-GspL	unknown	unknown	gnl\|CDD\|273768
NZ_CP041733.1\|WP_017384847.1\|1563318_1564971_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP041733.1\|WP_006174393.1\|1573561_1573882_+\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP041733.1\|WP_006809408.1\|1573072_1573294_-\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|184960
NZ_CP041733.1\|WP_033486314.1\|1568833_1569790_-\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|377343
NZ_CP041733.1\|WP_144427720.1\|1549761_1550559_+\|prepilin-peptidase	unknown	unknown	gnl\|CDD\|224900
NZ_CP041733.1\|WP_017384854.1\|1553618_1554059_+\|type-III-secretion-system-invasion-protein-IagB	unknown	unknown	gnl\|CDD\|185228
NZ_CP041733.1\|WP_017693711.1\|1559744_1561463_-\|ubiquinone-dependent-pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|181661
NZ_CP041733.1\|WP_015570988.1\|1565115_1566015_-\|lysine-exporter-LysO-family-protein	unknown	unknown	gnl\|CDD\|225287
NZ_CP041733.1\|WP_033486313.1\|1569949_1571065_+\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP041733.1\|WP_017693708.1\|1567178_1568837_+\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121

Protein	Function_ID	Function_description	E-value
NZ_CP041733.1\|WP_015570991.1\|1558704_1559706_-\|low-specificity-L-threonine-aldolase	gnl\|CDD\|236710	PRK10534, PRK10534, L-threonine aldolase; Provisional.	0
NZ_CP041733.1\|WP_017384852.1\|1556151_1557165_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	1.05058e-52
NZ_CP041733.1\|WP_144427722.1\|1554193_1556005_+\|PKD-domain-containing-protein	gnl\|CDD\|381595	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.	2.03028e-72
NZ_CP041733.1\|WP_026080729.1\|1566191_1566887_-\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	1.82782e-146
NZ_CP041733.1\|WP_015570984.1\|1571061_1573002_+\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP041733.1\|WP_144427721.1\|1550813_1553516_+\|PKD-domain-containing-protein	gnl\|CDD\|119365	cd06548, GH18_chitinase, The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.	2.62092e-124
NZ_CP041733.1\|WP_017693710.1\|1562339_1563308_-\|NADH-oxidoreductase	gnl\|CDD\|236735	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional.	0
NZ_CP041733.1\|WP_045341351.1\|1549279_1549765_+\|type-II-secretion-system-protein-M	gnl\|CDD\|377391	pfam04612, T2SSM, Type II secretion system (T2SS), protein M. This family of membrane proteins consists of Type II secretion system protein M sequences from several Gram-negative (diderm) bacteria. The precise function of these proteins is unknown, though in Vibrio cholerae, the T2SM (EpsM) protein interacts with the T2SL (EpsL) protein, and also forms homodimers.	7.74824e-29
NZ_CP041733.1\|WP_032653116.1\|1557257_1558694_-\|SDR-family-oxidoreductase	gnl\|CDD\|187556	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2. This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.37263e-139
NZ_CP041733.1\|WP_126804874.1\|1548149_1549283_+\|type-II-secretion-system-protein-GspL	gnl\|CDD\|273768	TIGR01709, Type_II_secretion_system_protein_L, type II secretion system protein L. This model represents GspL, protein L of the main terminal branch of the general secretion pathway, also called type II secretion. It transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens. [Protein fate, Protein and peptide secretion and trafficking].	1.23451e-40
NZ_CP041733.1\|WP_017384847.1\|1563318_1564971_-\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP041733.1\|WP_006174393.1\|1573561_1573882_+\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	9.90991e-48
NZ_CP041733.1\|WP_006809408.1\|1573072_1573294_-\|cold-shock-like-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	9.14248e-48
NZ_CP041733.1\|WP_033486314.1\|1568833_1569790_-\|DUF535-domain-containing-protein	gnl\|CDD\|377343	pfam04393, DUF535, Protein of unknown function (DUF535). Family member Shigella flexneri VirK is a virulence protein required for the expression, or correct membrane localization of IcsA (VirG) on the bacterial cell surface,. This family also includes Pasteurella haemolytica lapB, which is thought to be membrane-associated.	5.56196e-127
NZ_CP041733.1\|WP_144427720.1\|1549761_1550559_+\|prepilin-peptidase	gnl\|CDD\|224900	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	2.36344e-41
NZ_CP041733.1\|WP_017384854.1\|1553618_1554059_+\|type-III-secretion-system-invasion-protein-IagB	gnl\|CDD\|185228	PRK15328, PRK15328, type III secretion system invasion protein IagB.	5.32861e-87
NZ_CP041733.1\|WP_017693711.1\|1559744_1561463_-\|ubiquinone-dependent-pyruvate-dehydrogenase	gnl\|CDD\|181661	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase.	0
NZ_CP041733.1\|WP_015570988.1\|1565115_1566015_-\|lysine-exporter-LysO-family-protein	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	2.69399e-117
NZ_CP041733.1\|WP_033486313.1\|1569949_1571065_+\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP041733.1\|WP_017693708.1\|1567178_1568837_+\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0

>NZ_CP041733.1|WP_017693711.1|1559744_1561463_-|ubiquinone-dependent-pyruvate-dehydrogenase
MKQTVAAYIAKTLEQAGVKRIWGVTGDSLNGLSDSLNKMKTIEWMPTRHEEVAAFAAGAEAQLTGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAILNRGVSVVVLPGDVALKAAPETATTHWYSAPQPTITPAEEELKKLAQLLRYSSNIALMCGSGCAGAHKELVEFAGKLKAPVVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLILLGTQFPYRAFYPTDAKIIQIDINPGSIGAHSKVDMALIGDIKSTLAALLPLLEEKTDRKFLDKALSDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFADDDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAKATAPERQVVAMCGDGGFSMLMGDFLSVAQMKLPLKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVDDALQRAFAIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELAKTNWLR
>NZ_CP041733.1|WP_015570991.1|1558704_1559706_-|low-specificity-L-threonine-aldolase
MIDLRSDTVTRPGRAMLEEMMAAPVGDDVYGDDPTVNELQRYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQGAHNYLYEAGGAAVLGSIQPQPIDAAPDGTLPLDKVAAKIKADDIHFARTKLLSLENTHNGKVLPREYLKAAWDFTRERKLGLHVDGARIFNAVVEYGCELKAITQYCDSFTICLSKGLGTPVGSLLVGSADYIRRANRWRKMTGGGMRQAGILAAAGLYALKNNVSRLKDDHDNAAWMAAQLREIGADVMRHDTNMLFVRVGDEHAAALGDFMKARGVLINASPVVRLVMHLDVNREQLTEVVKHWQAFLQR
>NZ_CP041733.1|WP_032653116.1|1557257_1558694_-|SDR-family-oxidoreductase
MPQRILVLGASGYIGQHLTTALSQQGHQVLAAARNTERLQKLHLPGVTCHNVDLSWPKALPALLEGVDTLYYLVHSMGEGGDFIAHERQVAMNVRDALLQTPVKQVIFLSSLQAPEHEQSDHLRARQLTAEMLRSARIPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLAHPAEQHRVLEAAGPEVLSYQAQFEHFMRVSGRHRWLIPIPFPTRWISVWFLNVITSVPPTTAKALIQGLKHDLLADDRALRALIPQELIRFDDAVRNTLKEEEKLVNSSDWGYDAQAFARWRPEYGYYPKQAGCTVKTTASLAALWEVVNQIGGKERYFFGNILWQTRGALDLLVGHRLAKGRPAHPWLKVGDTVDSWKVIIVEPEKQLALLFGMKAPGLGRLCFTLKDNGDHRELDVRAWWHPHGMPGLFYWLLMIPAHLFIFRGMAKRIAQLAEEKRENN
>NZ_CP041733.1|WP_017384852.1|1556151_1557165_-|NAD(P)-dependent-oxidoreductase
MKVLVTGATSGLGRNAVEFLRNKGISVRATGRNEAMGKLLQKMGAEFVHADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQEAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHHRDIQEDFRPARFACEFARSKAAGEEVIDLLAQSNPHTRFTVLRPQSLFGPHDKVFIPRLAQMMHHYGSVLLPRGGDALVDMTYYENAVHAMWLASQPECDKLVSGRAYNITNGEPCTLRSIVQRLIDELKIDCRIRSVPYPMLDMIARSMERFGSKSAKEPALTHYGVSKLNFDFTLDISRAENELGYKPIVSLDEGIVRTAAWLRDHGKLHR
>NZ_CP041733.1|WP_144427722.1|1554193_1556005_+|PKD-domain-containing-protein
MNKRTLLSVLIAGACVAPLMAQAANLKETSSEPYTIKASDLAKKEKELTDFPLMASVKETIQTLDNAQVELIEPGRAANPDNVKRVEGIVKASDWEYLFPLRAQAYTYSNFLKAVGKFPALCKTYNDGRDSDAICRKELATMFAHFAQETGGHESWRPEAEWRQALVHVREMGWSEGQKGGYNGECNPDVWQGQTWPCGKDKDGDFLSYFGRGAKQLSYNYNYGPFSEAMYGDVRTLLDKPELVADTWLNLASAIFFFAYPQPPKPSMLQVIDGTWQPNDHDKANGMVPGFGVTTQIINGGVECGGPTEIAQSQNRIKYYKEFANYLKVPVPANEVLGCANMKQFDEGGAGALKIYWEQDWGWSADTPDGKTYSCQLVGYQTPFSAFKDGDYSKCVQHFFNVKIVNDEGSSETPDETPVTPTPTPSDDETPAPTPTPDETPVVVNHAPVAQIAGPIGAVEAGAQVSLSAEGSTDPDGNTLTYTWRSQDGQTVTGQDKAVVTFTAPESATAQQYEVSLTVSDGELSSTTSYLLNVKAKAATPSGEDTSYPAWSANSKYNAGDIVNNHGKLFQCKPFPYSGWCNNAPTYYEPGAGLAWAEAWTAL
>NZ_CP041733.1|WP_017384854.1|1553618_1554059_+|type-III-secretion-system-invasion-protein-IagB
MKKLILLLLIISQSALANCWNKAAHYYHVDPYLLYAIANVESGMNPYAVGQNRDGTRDVGLMQINSSHFTALESRGIDEYRLITEPCTSIMVGASILAGMIRVYGYNWEAVGAYNAGLKKENYPQRMKYAHKVWAKYQQLKLAARY
>NZ_CP041733.1|WP_144427721.1|1550813_1553516_+|PKD-domain-containing-protein
MKFMKPKYLALFIAAATSSAFAAAPGAPTIGYGNDKFALVEVDQAAQDYNNLVKVHNDGVDVKVEWNVWSGDAPTSAKVLLDGQTVWTGAAGATGSATFKVKKGGRYQEQVEVCNASGCAKSASKLIIVADTDGSHLLPLNTSLKENNKAFAKHTDKVVAAYFPEWGVYDRNFPVDKIPAANLNHILYGFIPICGGDGINDGLKTIEGGNSFRVLQNDCKGRPDYTVAIHDPWAALQKPQAGVSGWDDPYKGNFGQLMALKKAHPDLKVLPSIGGWTLSDPFFHMGDPAIRARFVSSVKEFLQTWKFFDGVDIDWEFPGGGGVSENLGNPQQDKATYTSLMHDLRTMLNELSAQTGRTYELTSAIGAGRDKIEDVDYTAAQQYLDHIFLMSYDFYGGWSNTVLGHQAALRAPAWRPDTDYTTENGVNALLSQGVQPGKIVVGAGMYGRGWTGVHGYTGNNPFTGTATGMVKGTWEPGVVDYRQIVNEYKGKPGWEYGYDADAEAPYVFNKTTGDLITYEDARSTTAKGKYVLANKLGGLFAWSIDSDTGDILNAMNESLLGGDATPVDPEVTNHAPIASSADQNVSGPVTVTLDGSASSDPDGDAITYKWTQVSGPSVTITNSTKAKATFNVAAATSDQTMVFRLTVTDAKGLSNAIDVQVVNKAPKANQAPVLNPMEAITLESGETYALHAQAADPDGDALTYAWSVPADMHATGTDSANVNITAPEVSSTSTYTLSVVVSDGKTSVQSNVQVTVNPKAAPAPVPDDEDTNPADDVTPPADDVTPPSDKGSCDAPVDANASKYAAWESSKIYNGGDTVSFDHLVWKAKYWTQGNQPGFGVDAWELVSNVKMNWRSDLVYNGGDTTTYEGNVYRAKWWTRGDNPANSDVWVKEGASTDCK
>NZ_CP041733.1|WP_144427720.1|1549761_1550559_+|prepilin-peptidase
MNTFSLMRDACPVGFPIMSAILGGIVGSFLGVVAERVPGMVMDEEGSGNLLFPASHCPVCQHALAAWENIPLLSWLLLRGRCHQCGSAIPLRLLLVELISALFFGITAWCMPDVQALFSLWLLAAFLLPLAMIDWQHQLLPDCLTQPLLWAGLVLHAFDHTLPLRDALFGAVAGYLSLWLLYWAFRLITGREGLGYGDFKLLAALGAWCGWQVLPSIELAAALSGIVGYFAVNNLNKNNLTISFGPYLAFAGIVVFMSQQFAFTF
>NZ_CP041733.1|WP_045341351.1|1549279_1549765_+|type-II-secretion-system-protein-M
MKERIAQLKSRYQNYSTREKIILKICAVAIVGAAVYYTGVIPLDNMIQNSKSTLKRQKETLNWMRSEIDKNHLQVQIVKTNNPRTVVENSAHEINLSLTDMRQEGQTLSFVVNRVNVYELKSWLREINQTTGVRLQKINLTPVDHLSDVKAQVQLTWSRNA
>NZ_CP041733.1|WP_126804874.1|1548149_1549283_+|type-II-secretion-system-protein-GspL
MKQVLFVRPDSREGGKIMWRESGSERVEVVDSLEMLAEQPLATRVCLLLPASDMIFRHFTLPKKMTSQAMAFSWMAEETLIGDVDNLHWTVLHKKGADVDAVAIDADRLRAALTRCQEAGLNVIQALPDAWLLPVTTGGSTLVAQDDSYWLRLSPHVAGEMEATLLPLLMQKAGVGEVWCYGDAPAKVHVDVQHAWQHPLALIQPQWQTCRVNLLHGEFSLKAGNGRAAKSMKAAMVAAGVLSVALLLGPRIAMAWMLVQQENRVQEEIVQVYQHHFPSMRQQTNIKYHFGQSLKKQSQGFFLQLDELENARQSVPAMEIELLEYDAQQNTLTLSVSAQNQPALQAFVNQTSENFDFTLQPVSTTEPYTAMIAGKHK
>NZ_CP041733.1|WP_017693710.1|1562339_1563308_-|NADH-oxidoreductase
MTMPTSQCPWRMQVHHIHQETPDVWTLSLLCHDYYPYRAGQYALVSVRNSADTLRAYTISSTPGVSEYITLTVRRIDDGAGSEWLTRDVKRGDYIWLSDAQGEFTCDDKTEDKFLLLAAGCGVTPIMSMRRWLAKYRPQANVQVIFSVRSPEDVIFAEEWRNYPVTLVAEHNATHGFVAGRLSRELLQSVPDIANRIVMTCGPAPYMEIVEKEVKALGVTRFFKEQFFTPVAEAATSGMKFTKLQPAQTFFGRVGTTLLEALESNNVPVAAACRAGVCGCCKTKVVSGEYTVTSTMTLTDAEIAEGYVLACSCHPQGDLVLA
>NZ_CP041733.1|WP_017384847.1|1563318_1564971_-|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAFKAREYGIVDHYVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLNADASARVDNPMAELQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNAIYAQYHKIMAWLGTWPSDMNALLECSMEIGQMNFKVMSILDAGETSTYGHPTPTQVNVKATEGKCILISGHDLKDLYNLLKQTEGTGVNVYTHGEMLPAHGYPELRKFKHLIGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSEIPHLITVGFGRETLLGAADSLIDLVSREKLRHIFLIGGCDGARGERNYFTDFATRVPEDCLILTLACGKYRFNKLDFGNIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVTNIVTGPTAPGFLTPDLLAILNEKFGLRSVTNVEDDMKQLLSA
>NZ_CP041733.1|WP_015570988.1|1565115_1566015_-|lysine-exporter-LysO-family-protein
MFSGLLIILLPLIVGYLIPLRHESALKLINRFLSWIVYVILFFMGISLAFLDNLATNLLSILHYSAVTVVVILLCNIAALFWLERTIPWKNHHHQEKLPSRIAMALESLKLCGVVVLGFLLGLTGWAFLQHATEASEYTLIFLLFLIGIQLRNNGMTLKQIVLNRRGMMVAVIVVASSLAGGVINAFILDLPLKTSLAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLVRRSRSTALGLCGATSMDFTLPVLQRSGGLEMVPAAIVHGFILSLLVPILMAFFSA
>NZ_CP041733.1|WP_026080729.1|1566191_1566887_-|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAAFPELGIGFVGVALAFGLTVLTMAFAVGHISGGHFNPAVTLGLWAGGRFPAKDIIGYIIAQVIGGIIAAAVLYVIASGKAGFDAAASGFASNGFGEHSPGGYSMLSAIVIEIVLTAGFLLVIHGATDKYAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWLFWVMPIIGGILGGVLYRTLLEKRD
>NZ_CP041733.1|WP_017693708.1|1567178_1568837_+|ATP-dependent-endonuclease
MLLERVEIVGFRGINRLSLQLEQNNVLIGENAWGKSSLLDALTLLLSPEENLYHFVHDDFWFPPGDVNGREKHLHIILTFRESEPGRHRVRRFRPMSPCWVPCEDGFQRIFYRLEGEMAQNDGVLTLREFLDEKGNPIPLDNIDELARHLIRLSPVLRLRDARFMRRIRNGTVPNMPEVEVTARELDFLARELVSRPQNLTDGQIRQGLSAMVQLLEHYFSEQGTGQARHRLMRRRSHDEQRSWRYLDIINRMIDRPGGRTHRVILLGLFSTLLQAKGTVRLDRDARPLLLVEDPETRLHPIMLSVAWHLLNLLPLQRVTTTNSGELLSLTPVEYVCRLVRESSRVTAYRLGPGGLNAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLIKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREEEREHLTALPAMDMEHFMYRQGFDDVFHRVAMIPVDVPMNMRRVIAKAIHRSSKPDLAIEVATEAGRRGVESVPTLLRKMFSRVLWLARGRAD
>NZ_CP041733.1|WP_033486314.1|1568833_1569790_-|DUF535-domain-containing-protein
MSSIVDTPYSTLPQPKSGWQLFKSLASGSLTPGLAWQNPAYRRKFMLRSLATPFTTARLLGNLAKQPRLMQILRVQPGLPCRLHRPWLTVNMGRQTTLDALNDHYEMMSRHLPASLLNGYLSSQGIMLVTLTGKEEQQFSVRLSADAFLDKEGEATLTFCDHQNTVLAELTFTLCTYQGKPTLFIGGMQGAKAHVPHEHIQLATKACHGLFPKRLLVEAVMTLAGAFPVEQILAVSNATHIYRSWRYRKKKEGKLLADYDSFWRSLGGQQQDNGNFALPLTMPRKPMEEIASKKRSEYRRRYALLDSLIQQVSQATAR
>NZ_CP041733.1|WP_033486313.1|1569949_1571065_+|macrolide-transporter-subunit-MacA
MNLKGKRRKLFLLLAVVVLAGGFWLWKVLNAPVPQYQTLIVRPGELQQNVLATGKLDALRKVDVGAQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAQNQIREVEATLMELRAQRAQAQAERNLAQVTLTRQQALAKTQAISKQDLDTAATELAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTQIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPQTRYEGVLKDILPTPEKVNDAIFYYARFEVPNPQGVLRLEMTAQVHIQLTGVKNVLTVPLSALGESAGDNRYKVKVLRNGETREREVVIGARNDTDVVVVKGLEEGEEVVTSETLPGAAQ
>NZ_CP041733.1|WP_015570984.1|1571061_1573002_+|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTALLELNDIRRSYPSGDGPVEVLKGISLRVEAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGTDVSTLDGDALAKLRREHFGFIFQRYHLLSHLSAAQNVEVPAVYAGVERKKRLERAKALLTRLGLAERVDYQPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDQGHTVIIVTHDPQVAAQAERIIEIHDGELVSNPPPRQSRAAAPKEALPASTGWGQFSSGFREALTMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQLVLADIRAIGTNTIDVYPGKDFGDDEPQYQQALKYDDLAAIQKQPWVNSATPAVSQNLRLRYGNIDVAASANGVSGDYFNVYGMTFSEGATFNAEQLAGRAQVVVLDANSRRQLFPNKTRVVGEVILVGNMPATVIGVAEEKQSMFGSSKILRVWLPYSTISGRIMGQSWLNSITVRVKEGYDSALAEQQLERLLTLRHGKKDFFTWNMDGLLKTAEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGAMGIALSMMIAFALQLFLPGWEIGFSPMAILTAFLCSTFTGILFGWLPARNAARLDPVDALARE
>NZ_CP041733.1|WP_006809408.1|1573072_1573294_-|cold-shock-like-protein-CspD
MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASLIVPVEAETVA
>NZ_CP041733.1|WP_006174393.1|1573561_1573882_+|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEDKVRDALKPPSMYKVMLMNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYRGKAICGIFTAEVAETKVAMVNDYARENEHPLLCTLEKA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	JF974302	Vibrio phage VBpm10, * SEQUENCING IN PROGRESS *, 8 unordered pieces	21037-21067	6	0.806
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	MG592513	Vibrio phage 1.142.O._10N.261.49.E11, partial genome	26631-26661	7	0.774
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	MG592412	Vibrio phage 1.028.O._10N.286.45.B6, partial genome	26631-26661	7	0.774
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	MG592527	Vibrio phage 1.159.O._10N.261.46.F12, partial genome	26631-26661	7	0.774
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	MG592588	Vibrio phage 1.217.O._10N.261.45.A1, partial genome	26631-26661	7	0.774
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	MG592589	Vibrio phage 1.219.O._10N.261.45.E2, partial genome	26631-26661	7	0.774
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	MG592524	Vibrio phage 1.156.O._10N.261.45.A6, partial genome	26631-26661	7	0.774
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	MG592669	Vibrio phage 2.159.A._10N.261.46.F12, partial genome	26631-26661	7	0.774
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	MG592670	Vibrio phage 2.159.B._10N.261.46.F12, partial genome	26631-26661	7	0.774
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	MG592507	Vibrio phage 1.136.O._10N.261.45.E11, partial genome	26631-26661	7	0.774
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1534665-1534695	7	0.774
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	NC_015184	Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence	62534-62564	8	0.742
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	NZ_CP035511	Haematobacter massiliensis strain OT1 plasmid pOT1-1, complete sequence	283146-283176	8	0.742
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	22328-22358	9	0.71
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	NC_013859	Azospirillum sp. B510 plasmid pAB510e, complete sequence	475099-475129	9	0.71
NZ_CP041733_2	2.1\|1561772\|31\|NZ_CP041733\|CRISPRCasFinder	1561772-1561802	31	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	714186-714216	10	0.677

1. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to JF974302 (Vibrio phage VBpm10, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces) position: , mismatch: 6, identity: 0.806

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
acggcgacactgaaacgcgccagagcattgt	Protospacer
**********.** ********* *..** *

2. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to MG592513 (Vibrio phage 1.142.O._10N.261.49.E11, partial genome) position: , mismatch: 7, identity: 0.774

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
acggcgacactgaaacgcgccagagcatagt	Protospacer
**********.** ********* *..*  *

3. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to MG592412 (Vibrio phage 1.028.O._10N.286.45.B6, partial genome) position: , mismatch: 7, identity: 0.774

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
acggcgacactgaaacgcgccagagcatagt	Protospacer
**********.** ********* *..*  *

4. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to MG592527 (Vibrio phage 1.159.O._10N.261.46.F12, partial genome) position: , mismatch: 7, identity: 0.774

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
acggcgacactgaaacgcgccagagcatagt	Protospacer
**********.** ********* *..*  *

5. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to MG592588 (Vibrio phage 1.217.O._10N.261.45.A1, partial genome) position: , mismatch: 7, identity: 0.774

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
acggcgacactgaaacgcgccagagcatagt	Protospacer
**********.** ********* *..*  *

6. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to MG592589 (Vibrio phage 1.219.O._10N.261.45.E2, partial genome) position: , mismatch: 7, identity: 0.774

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
acggcgacactgaaacgcgccagagcatagt	Protospacer
**********.** ********* *..*  *

7. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to MG592524 (Vibrio phage 1.156.O._10N.261.45.A6, partial genome) position: , mismatch: 7, identity: 0.774

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
acggcgacactgaaacgcgccagagcatagt	Protospacer
**********.** ********* *..*  *

8. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to MG592669 (Vibrio phage 2.159.A._10N.261.46.F12, partial genome) position: , mismatch: 7, identity: 0.774

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
acggcgacactgaaacgcgccagagcatagt	Protospacer
**********.** ********* *..*  *

9. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to MG592670 (Vibrio phage 2.159.B._10N.261.46.F12, partial genome) position: , mismatch: 7, identity: 0.774

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
acggcgacactgaaacgcgccagagcatagt	Protospacer
**********.** ********* *..*  *

10. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to MG592507 (Vibrio phage 1.136.O._10N.261.45.E11, partial genome) position: , mismatch: 7, identity: 0.774

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
acggcgacactgaaacgcgccagagcatagt	Protospacer
**********.** ********* *..*  *

11. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

acggcgacaccgacacgcgccag----cgtgtttt	CRISPR spacer
acggcgagaccgtcacgcgccaggtgccggg----	Protospacer
******* **** **********    ** *

12. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to NC_015184 (Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence) position: , mismatch: 8, identity: 0.742

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
gcggcgacaccgacactcgcccgcgatctca	Protospacer
.*************** **** ***  .*.

13. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to NZ_CP035511 (Haematobacter massiliensis strain OT1 plasmid pOT1-1, complete sequence) position: , mismatch: 8, identity: 0.742

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
tcggcgatgccgacacgcgccagcagttcta	Protospacer
 ******..***************.  *.*

14. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.71

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
ccggcgacatcgacacgcggcagcccaggat	Protospacer
 ********.********* **** ..   *

15. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 9, identity: 0.71

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
ccggcgacaccgacacccggcagcccaggat	Protospacer
 *************** ** **** ..   *

16. spacer 2.1|1561772|31|NZ_CP041733|CRISPRCasFinder matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 10, identity: 0.677

acggcgacaccgacacgcgccagcgtgtttt	CRISPR spacer
ggggcgactccgacccgcgccagcgccgcag	Protospacer
. ****** ***** **********.  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1803606 : 1864135

Enterobacterial_phage(24.07%)

protease,tRNA,terminase,integrase,capsid,holin,tail,head,portal

attL 1806365:1806380|attR 1844549:1844564

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032103856.1\|1803606_1804719_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_015570797.1\|1804759_1805233_-	NUDIX hydrolase	NA	NA	NA	NA
WP_017693618.1\|1805232_1805895_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_003857898.1\|1806012_1807263_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	7.9e-21	94.4
1806365:1806380	attL	NA	NA	NA	NA
WP_063135241.1\|1807374_1808112_-	serine/threonine-protein phosphatase	I6PCV8	Cronobacter_phage	4.3e-51	43.1
WP_063135240.1\|1808108_1808843_-	protein kinase family protein	I6PD73	Cronobacter_phage	1.4e-33	36.7
WP_023292711.1\|1809575_1809728_+	isocitrate dehydrogenase (NADP(+))	Q77Z09	Phage_21	3.4e-19	94.0
WP_015570796.1\|1809803_1810049_+	YmjA family protein	NA	NA	NA	NA
WP_047735062.1\|1810053_1811553_-	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
WP_071524166.1\|1811677_1811770_-	stress response membrane protein YncL	NA	NA	NA	NA
WP_003857896.1\|1812139_1812388_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_015570794.1\|1812441_1812516_-	protein YoaJ	NA	NA	NA	NA
WP_015570793.1\|1812516_1812615_-	YoaK family small membrane protein	NA	NA	NA	NA
WP_032653235.1\|1812660_1813689_-	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	3.2e-12	31.6
WP_015570791.1\|1814001_1814256_+	DUF333 domain-containing protein	NA	NA	NA	NA
WP_015570790.1\|1814336_1814642_+	hypothetical protein	NA	NA	NA	NA
WP_015570789.1\|1814642_1814987_-	DUF488 domain-containing protein	NA	NA	NA	NA
WP_047637426.1\|1815138_1815846_+	CTP synthase	NA	NA	NA	NA
WP_023303489.1\|1815877_1817065_-	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_017384695.1\|1817164_1817956_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003857881.1\|1817939_1818386_-	DUF441 domain-containing protein	NA	NA	NA	NA
WP_023303491.1\|1818492_1820529_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA
WP_015570785.1\|1820544_1821876_-	sugar (Glycoside-Pentoside-Hexuronide) transporter	NA	NA	NA	NA
WP_023303492.1\|1822284_1822785_-\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_032103854.1\|1823004_1824147_-\|integrase	tyrosine-type recombinase/integrase	O21929	Phage_21	6.4e-94	49.3
WP_022650818.1\|1824121_1824385_-	hypothetical protein	NA	NA	NA	NA
WP_045345724.1\|1824417_1824687_-	hypothetical protein	K7PKM4	Enterobacterial_phage	3.1e-31	75.3
WP_032620364.1\|1824766_1825111_-	DUF550 domain-containing protein	K7PGV7	Enterobacterial_phage	2.7e-40	74.3
WP_063436968.1\|1825708_1826536_-	hypothetical protein	K7PKM7	Enterobacterial_phage	2.8e-123	86.3
WP_144428040.1\|1826535_1826949_-	hypothetical protein	K7PJS4	Enterobacterial_phage	6.2e-55	84.7
WP_144427735.1\|1826997_1827318_-	hypothetical protein	K7P7N6	Enterobacteria_phage	1.8e-25	54.7
WP_063419993.1\|1828091_1828739_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	1.9e-74	63.0
WP_016530206.1\|1828843_1829041_+	hypothetical protein	H9C161	Pectobacterium_phage	2.7e-16	66.1
WP_063866408.1\|1829066_1829537_+	hypothetical protein	K7PJS5	Enterobacterial_phage	1.4e-74	92.3
WP_063945205.1\|1829777_1829957_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	5.1e-14	69.2
WP_144427736.1\|1829946_1830825_+	GntR family transcriptional regulator	U5P0A0	Shigella_phage	7.0e-40	82.0
WP_144427737.1\|1830821_1831316_+	hypothetical protein	NA	NA	NA	NA
WP_144427738.1\|1831315_1831975_+	DNA methyltransferase	I6PDF5	Cronobacter_phage	2.1e-97	80.4
WP_144427739.1\|1831971_1832301_+	hypothetical protein	NA	NA	NA	NA
WP_006809179.1\|1832297_1832525_+	hypothetical protein	NA	NA	NA	NA
WP_032103831.1\|1832521_1832842_+	LexA family transcriptional regulator	K7PHB4	Enterobacterial_phage	1.2e-42	75.5
WP_045325138.1\|1832838_1833228_+	RusA family crossover junction endodeoxyribonuclease	K7PKN5	Enterobacterial_phage	2.1e-68	95.3
WP_144427740.1\|1833224_1834214_+	DUF968 domain-containing protein	K7PJS6	Enterobacterial_phage	1.1e-166	85.1
WP_144427741.1\|1834226_1834805_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	5.6e-46	53.9
WP_144427742.1\|1834919_1835492_+	hypothetical protein	NA	NA	NA	NA
WP_022648767.1\|1835581_1835977_+	phage membrane protein	K7PHB9	Enterobacterial_phage	9.1e-64	99.2
WP_144427743.1\|1835963_1836245_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	2.0e-41	91.4
WP_144427744.1\|1836244_1836874_+	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	2.1e-102	88.0
WP_144427745.1\|1836881_1837151_+	hypothetical protein	G8C7W1	Escherichia_phage	3.2e-28	78.7
WP_045334178.1\|1837107_1837302_+	hypothetical protein	K7PM01	Enterobacterial_phage	3.7e-18	87.8
WP_144427746.1\|1837427_1838252_+	hypothetical protein	K7PH02	Enterobacteria_phage	3.2e-18	74.2
WP_144427747.1\|1838263_1839721_+	glycosyltransferase family 2 protein	K7PKP3	Enterobacterial_phage	6.0e-270	90.7
WP_144427748.1\|1839733_1839943_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_144427749.1\|1839889_1840153_-	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_144428041.1\|1840316_1840907_+	hypothetical protein	S4TR53	Salmonella_phage	1.0e-98	85.6
WP_032619870.1\|1840906_1841257_+	HNH endonuclease	K7PHK9	Enterobacteria_phage	1.2e-51	81.9
WP_022650844.1\|1841414_1841888_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	2.3e-85	98.7
WP_144427750.1\|1841887_1843624_+\|terminase	terminase large subunit	K7PKT2	Enterobacteria_phage	0.0e+00	99.5
WP_032104390.1\|1843623_1844928_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	4.7e-234	93.3
1844549:1844564	attR	NA	NA	NA	NA
WP_144427751.1\|1844941_1845790_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	2.7e-137	91.1
WP_144427752.1\|1845799_1847011_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	9.9e-194	86.7
WP_144427753.1\|1847053_1847380_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.2e-48	86.1
WP_126542737.1\|1847443_1847656_+	hypothetical protein	K7PGR0	Enterobacteria_phage	2.1e-11	62.5
WP_144427754.1\|1847657_1847990_+\|head	phage head closure protein	K7PH08	Enterobacteria_phage	1.8e-49	85.5
WP_144427755.1\|1847982_1848522_+	HK97 gp10 family phage protein	Q9MCV1	Escherichia_phage	6.5e-81	85.3
WP_049012839.1\|1848518_1848884_+	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	1.0e-45	68.6
WP_144427756.1\|1848939_1849431_+\|tail	phage tail protein	A0A286S1Q8	Klebsiella_phage	8.1e-62	71.6
WP_047741118.1\|1849484_1849862_+\|tail	phage tail assembly protein	K7PJU9	Enterobacteria_phage	5.1e-48	77.2
WP_058663178.1\|1849873_1850128_+	hypothetical protein	A0A286S1P2	Klebsiella_phage	3.1e-25	62.7
WP_058685377.1\|1850129_1852685_+\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	2.1e-177	46.8
WP_048974390.1\|1852684_1853158_+	hypothetical protein	A0A286S298	Klebsiella_phage	1.4e-58	63.5
WP_048974389.1\|1853154_1853637_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	1.5e-60	71.2
WP_048974387.1\|1853646_1854027_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	2.2e-59	78.6
WP_144427757.1\|1854023_1856738_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	57.5
WP_023303499.1\|1856787_1859163_+	SGNH/GDSL hydrolase family protein	G0XNW5	Escherichia_phage	1.5e-92	32.7
WP_144427758.1\|1859202_1860648_-	hypothetical protein	NA	NA	NA	NA
WP_144427759.1\|1860644_1861562_-	glycosyltransferase	U5P087	Shigella_phage	2.5e-157	90.5
WP_023303502.1\|1861558_1861921_-	GtrA family protein	U5P0S6	Shigella_phage	5.8e-49	83.3
WP_023303503.1\|1862033_1862273_+	hypothetical protein	K7P7E2	Enterobacteria_phage	8.5e-25	66.7
WP_023303504.1\|1862272_1862593_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.4e-25	53.8
WP_023303505.1\|1862851_1864135_-	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	1.1e-09	28.3

DBSCAN-SWA_2

2033546 : 2144380

148

Salmonella_phage(28.93%)

lysis,holin,tail,head,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023332828.1\|2033546_2034827_-	DUF3596 domain-containing protein	B6DZ48	Enterobacteria_phage	2.5e-123	50.9
WP_022650951.1\|2034859_2035108_-	excisionase family protein	S4TND0	Salmonella_phage	8.3e-15	50.0
WP_023306352.1\|2035217_2035448_-	hypothetical protein	G8C7S3	Escherichia_phage	9.7e-34	94.7
WP_129318017.1\|2035456_2035696_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	9.8e-29	75.6
WP_144428042.1\|2035673_2036279_-	hypothetical protein	Q71T76	Escherichia_phage	7.9e-51	49.8
WP_144427789.1\|2036290_2036509_-	TraR/DksA family transcriptional regulator	A0A0N7C094	Escherichia_phage	1.6e-17	63.4
WP_063944929.1\|2036600_2036792_-	DUF1382 family protein	A0A0P0ZC60	Stx2-converting_phage	1.4e-14	66.1
WP_144427790.1\|2036788_2036989_-	hypothetical protein	NA	NA	NA	NA
WP_006176198.1\|2036985_2037204_-	hypothetical protein	NA	NA	NA	NA
WP_063944930.1\|2037200_2037752_-	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	2.8e-55	58.9
WP_063624365.1\|2037912_2038341_-	hypothetical protein	M9NYX4	Enterobacteria_phage	2.0e-72	95.1
WP_032105028.1\|2038349_2038832_-	siphovirus Gp157 family protein	G8C7S9	Escherichia_phage	8.4e-80	99.4
WP_063944931.1\|2038828_2039743_-	DNA recombinase	G8C7T0	Escherichia_phage	1.0e-171	99.7
WP_063944932.1\|2039752_2040034_-	host nuclease inhibitor GamL	M9NZI3	Enterobacteria_phage	5.5e-47	96.8
WP_006809788.1\|2040105_2040315_-	cell division protein FtsZ	M9NZE2	Enterobacteria_phage	6.7e-34	95.7
WP_063944933.1\|2040466_2040976_-	hypothetical protein	G8C7T4	Escherichia_phage	1.2e-89	97.6
WP_023330696.1\|2041137_2041368_-	hypothetical protein	NA	NA	NA	NA
WP_063840716.1\|2042069_2042267_+	hypothetical protein	G8C7T7	Escherichia_phage	6.4e-26	98.4
WP_032667315.1\|2042412_2043186_-	hypothetical protein	NA	NA	NA	NA
WP_144427791.1\|2043328_2043988_-	helix-turn-helix domain-containing protein	F1C599	Cronobacter_phage	3.4e-71	64.6
WP_022650973.1\|2044096_2044315_+	helix-turn-helix transcriptional regulator	A0A0N7C2U7	Escherichia_phage	1.9e-10	47.0
WP_144427792.1\|2044345_2044888_+	regulator	M9NZI6	Enterobacteria_phage	9.5e-80	85.6
WP_144427793.1\|2045073_2046039_+	replication protein	K7PGZ0	Enterobacteria_phage	4.5e-72	95.5
WP_144427794.1\|2046035_2046725_+	phage replication protein	G8C7U6	Escherichia_phage	1.7e-126	96.1
WP_144427795.1\|2046726_2047071_+	helix-turn-helix transcriptional regulator	G8C7U7	Escherichia_phage	6.1e-56	96.5
WP_144427796.1\|2047067_2047364_+	DUF4406 domain-containing protein	A0A222YYT7	Escherichia_phage	5.4e-29	63.0
WP_144427797.1\|2047360_2047813_+	hypothetical protein	A0A0F6N6A6	Escherichia_phage	7.3e-09	49.5
WP_144427798.1\|2047809_2048025_+	hypothetical protein	NA	NA	NA	NA
WP_045340902.1\|2048021_2048282_+	DUF4752 family protein	T1S9K2	Salmonella_phage	3.1e-36	91.7
WP_023306327.1\|2049368_2049806_-	hypothetical protein	A0A222YWI5	Escherichia_phage	2.8e-13	41.1
WP_144427799.1\|2050174_2050630_+	hypothetical protein	I6PD71	Cronobacter_phage	1.7e-58	64.9
WP_144427800.1\|2050629_2050800_+	hypothetical protein	K7P7K0	Enterobacteria_phage	3.1e-21	92.9
WP_144428043.1\|2050796_2051465_+	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	7.0e-125	94.1
WP_144427801.1\|2051457_2052105_+	hypothetical protein	S4TSR3	Salmonella_phage	1.9e-79	68.4
WP_045621977.1\|2052101_2052743_+	HNH endonuclease	A0A2I7QND8	Vibrio_phage	1.6e-38	46.0
WP_023330221.1\|2052739_2052856_+	hypothetical protein	NA	NA	NA	NA
WP_063840973.1\|2052852_2053542_+	antiterminator	I6PDF8	Cronobacter_phage	1.6e-55	49.8
WP_001514183.1\|2054061_2054463_+	hypothetical protein	NA	NA	NA	NA
WP_001514184.1\|2054459_2054735_+\|holin	phage holin family protein	S4TNV9	Salmonella_phage	5.8e-09	41.0
WP_144427802.1\|2054738_2055179_+	glycoside hydrolase family protein	A0A0M4R365	Salmonella_phage	3.0e-60	79.9
WP_144427803.1\|2055175_2055649_+\|lysis	lysis protein	Q8HA85	Salmonella_phage	4.2e-39	56.0
WP_144427804.1\|2055683_2055959_+	hypothetical protein	K7P6G5	Enterobacteria_phage	5.6e-28	72.5
WP_047355357.1\|2056109_2056328_+	hypothetical protein	NA	NA	NA	NA
WP_144427805.1\|2056493_2057132_+	hypothetical protein	I6S676	Salmonella_phage	4.1e-114	92.0
WP_058647982.1\|2057163_2057622_+	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	2.8e-64	80.9
WP_144427806.1\|2057614_2058862_+\|terminase	PBSX family phage terminase large subunit	I6RSK1	Salmonella_phage	1.1e-211	95.9
WP_032669775.1\|2058877_2060227_+	DUF1073 domain-containing protein	Q5G8Y4	Enterobacteria_phage	5.3e-204	77.3
WP_144427807.1\|2060186_2061113_+\|head	phage head morphogenesis protein	Q5G8Y3	Enterobacteria_phage	1.8e-163	93.2
WP_144427808.1\|2061115_2062381_+	hypothetical protein	Q5G8Y2	Enterobacteria_phage	6.9e-214	88.1
WP_023300384.1\|2062393_2062843_+	hypothetical protein	H6WRT3	Salmonella_phage	5.5e-65	85.9
WP_144427809.1\|2062860_2063937_+	hypothetical protein	Q5G8Y0	Enterobacteria_phage	3.5e-190	91.6
WP_063938464.1\|2063946_2064240_+	hypothetical protein	A0A1V0E5P8	Salmonella_phage	1.5e-42	87.6
WP_047052488.1\|2064302_2064704_+	hypothetical protein	A0A1V0E5R0	Salmonella_phage	3.0e-62	85.0
WP_047052487.1\|2064703_2064892_+	hypothetical protein	I6R0P9	Salmonella_phage	7.7e-29	93.5
WP_045332269.1\|2064875_2065238_+	hypothetical protein	I6S1Q5	Salmonella_phage	4.9e-64	94.2
WP_045345395.1\|2065245_2065641_+	hypothetical protein	Q5G8X5	Enterobacteria_phage	2.0e-66	95.4
WP_058663653.1\|2065637_2066024_+	hypothetical protein	I6R9A6	Salmonella_phage	3.6e-65	96.1
WP_058663651.1\|2066039_2066774_+	hypothetical protein	A0A1V0E5P2	Salmonella_phage	1.5e-115	86.8
WP_096889005.1\|2066814_2067468_+	hypothetical protein	I6R0Q2	Salmonella_phage	1.0e-112	90.3
WP_096889003.1\|2067579_2067948_+	hypothetical protein	H6WRV1	Salmonella_phage	1.1e-58	90.8
WP_063159490.1\|2067944_2068247_+	hypothetical protein	H6WRV2	Salmonella_phage	2.2e-41	98.0
WP_047653434.1\|2068319_2068817_+	hypothetical protein	NA	NA	NA	NA
WP_144428044.1\|2068878_2071119_+	tape measure protein	I6S1R4	Salmonella_phage	6.3e-178	59.7
WP_063250684.1\|2071118_2071466_+\|tail	phage tail protein	H6WRV8	Salmonella_phage	7.0e-60	94.8
WP_022651024.1\|2071621_2071819_-	hypothetical protein	NA	NA	NA	NA
WP_023303627.1\|2071984_2072689_+\|tail	phage minor tail protein L	A0A1V0E5N2	Salmonella_phage	9.3e-136	98.7
WP_032668142.1\|2072688_2073408_+	C40 family peptidase	A0A1V0E5M9	Salmonella_phage	3.3e-120	82.3
WP_017385011.1\|2073350_2073884_+\|tail	tail assembly protein	H6WRW3	Salmonella_phage	1.0e-54	68.2
WP_144427810.1\|2073893_2077685_+	DUF1983 domain-containing protein	I6R9B3	Salmonella_phage	0.0e+00	60.9
WP_017694302.1\|2077727_2078042_+	hypothetical protein	A0A2P0WA17	Enterobacter_phage	3.0e-33	65.7
WP_006809145.1\|2078042_2078714_+	hypothetical protein	A0A2P0WA07	Enterobacter_phage	2.0e-87	73.1
WP_039268850.1\|2078821_2079055_+	hypothetical protein	E4WL42	Enterobacteria_phage	8.6e-30	77.6
WP_144427811.1\|2079113_2080388_+\|tail	phage tail protein	K7PKG5	Enterobacteria_phage	3.1e-161	69.4
WP_144427812.1\|2080470_2080710_+	hypothetical protein	K7P7N3	Enterobacteria_phage	1.7e-25	69.6
WP_023306078.1\|2080709_2081027_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.1e-19	48.0
WP_023303634.1\|2081540_2082569_+	Mal regulon transcriptional regulator MalI	NA	NA	NA	NA
WP_023303635.1\|2082670_2084197_-	YdgA family protein	NA	NA	NA	NA
WP_032619780.1\|2084296_2085472_-	mannose-6-phosphate isomerase	NA	NA	NA	NA
WP_015570656.1\|2085670_2087317_+	fumarate hydratase	NA	NA	NA	NA
WP_017693543.1\|2087499_2088894_+	class II fumarate hydratase	NA	NA	NA	NA
WP_023296464.1\|2088894_2089824_-	DNA replication terminus site-binding protein	NA	NA	NA	NA
WP_033487082.1\|2089898_2091197_-	two-component system sensor histidine kinase RstB	W8CYF6	Bacillus_phage	3.6e-16	24.5
WP_144427813.1\|2091226_2092507_-	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	5.7e-123	52.8
WP_017693537.1\|2092506_2092722_-	DUF1233 family excisionase	A0A0U2RY08	Escherichia_phage	5.0e-16	50.7
WP_144427814.1\|2092786_2093026_-	DUF4060 family protein	M9P0E0	Enterobacteria_phage	1.2e-23	69.2
WP_144427815.1\|2093060_2094146_-	recombinase RecT	K7PKR8	Enterobacteria_phage	1.9e-103	53.1
WP_144427816.1\|2094155_2097575_-	exodeoxyribonuclease	K7P6V4	Enterobacteria_phage	0.0e+00	67.7
WP_144427817.1\|2097882_2098080_-	DUF1482 family protein	NA	NA	NA	NA
WP_032682189.1\|2098079_2098280_-	hypothetical protein	NA	NA	NA	NA
WP_044704637.1\|2098475_2098889_-	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	1.4e-06	42.4
WP_117500397.1\|2099009_2099240_+	hypothetical protein	H6WRX5	Salmonella_phage	2.0e-10	44.9
WP_006811599.1\|2099242_2099785_+	hypothetical protein	M9NZI6	Enterobacteria_phage	1.1e-46	54.4
WP_032659815.1\|2099793_2100048_+	hypothetical protein	NA	NA	NA	NA
WP_144428045.1\|2100221_2101214_+	replication protein	A5VW95	Enterobacteria_phage	1.4e-49	75.0
WP_144427818.1\|2101197_2101890_+	phage replication protein	G8C7U6	Escherichia_phage	7.1e-80	60.4
WP_144427819.1\|2102591_2102852_+	DUF977 family protein	H6WRX9	Salmonella_phage	2.4e-28	72.3
WP_144427820.1\|2102848_2103337_+	hypothetical protein	NA	NA	NA	NA
WP_064489599.1\|2104317_2104932_-	hypothetical protein	A0A2D1GNI4	Pseudomonas_phage	9.2e-31	39.4
WP_127348470.1\|2104935_2105280_-	hypothetical protein	NA	NA	NA	NA
WP_064489600.1\|2105272_2106028_-	TIGR04255 family protein	A0A2D1GNM9	Pseudomonas_phage	2.5e-22	31.3
WP_045332197.1\|2107249_2107483_+	DinI family protein	A0A0M4REN2	Salmonella_phage	4.0e-27	80.5
WP_144427821.1\|2107593_2107803_+	hypothetical protein	NA	NA	NA	NA
WP_144427822.1\|2107887_2108487_+	DUF1367 family protein	A0A0M4QX23	Salmonella_phage	7.7e-99	87.3
WP_032645668.1\|2108492_2108693_+	hypothetical protein	H6WRY8	Salmonella_phage	3.7e-21	66.7
WP_144427823.1\|2108695_2108977_+	DUF1364 family protein	K7P7Q1	Enterobacteria_phage	1.0e-45	97.8
WP_039270102.1\|2108973_2109330_+	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	3.4e-62	94.9
WP_144427824.1\|2109326_2109464_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	1.6e-07	73.7
WP_144427825.1\|2109463_2110297_+	antitermination protein	K7PKS8	Enterobacteria_phage	1.7e-123	79.8
WP_023296485.1\|2110488_2110680_+	hypothetical protein	NA	NA	NA	NA
WP_022651287.1\|2111185_2111374_+	hypothetical protein	NA	NA	NA	NA
WP_015570936.1\|2111467_2111854_+	hypothetical protein	A0A192Y8P2	Salmonella_phage	3.2e-45	78.1
WP_022651286.1\|2111840_2112122_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	1.3e-19	46.2
WP_144427826.1\|2112121_2112751_+	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	1.3e-101	87.1
WP_144428046.1\|2112758_2113028_+	hypothetical protein	G8C7W1	Escherichia_phage	1.1e-31	84.3
WP_063867083.1\|2112984_2113164_+	hypothetical protein	K7PM01	Enterobacterial_phage	1.7e-14	81.4
WP_017693500.1\|2114540_2114882_+	hypothetical protein	NA	NA	NA	NA
WP_144427827.1\|2115219_2116209_+\|terminase	terminase small subunit	I6X6R5	Burkholderia_virus	2.0e-35	40.7
WP_017693498.1\|2116186_2117494_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.5e-142	57.0
WP_144427828.1\|2117495_2118884_+	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	1.8e-122	49.7
WP_144427829.1\|2118885_2119977_+	hypothetical protein	I6PD76	Cronobacter_phage	2.0e-116	57.7
WP_048229364.1\|2120063_2120834_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	2.8e-69	60.0
WP_144427830.1\|2120846_2121800_+	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	6.9e-134	75.0
WP_144428047.1\|2122117_2122600_+	hypothetical protein	A0A2I7RR81	Vibrio_phage	2.3e-08	32.0
WP_032654540.1\|2122601_2122862_+	hypothetical protein	J9Q7U0	Salmonella_phage	2.5e-22	60.5
WP_144427831.1\|2122865_2123216_+	RNA-binding S4 domain-containing protein	I6PD77	Cronobacter_phage	3.5e-35	59.5
WP_144427832.1\|2123217_2123802_+	hypothetical protein	G8C7Q1	Escherichia_phage	2.9e-50	53.7
WP_144427833.1\|2123798_2124209_+	hypothetical protein	I6PDJ8	Cronobacter_phage	1.1e-32	50.7
WP_048219641.1\|2124265_2124937_+\|tail	phage tail protein	I6PBN6	Cronobacter_phage	4.4e-50	48.4
WP_144427834.1\|2124998_2125310_+	hypothetical protein	I6PDG2	Cronobacter_phage	2.4e-35	68.9
WP_144427835.1\|2125357_2125621_+	hypothetical protein	I6PD79	Cronobacter_phage	1.4e-15	59.3
WP_144427836.1\|2125617_2128545_+\|tail	phage tail tape measure protein	I6PCW3	Cronobacter_phage	4.6e-136	36.6
WP_144427837.1\|2128665_2128857_+	hypothetical protein	NA	NA	NA	NA
WP_144427838.1\|2128857_2129295_+	hypothetical protein	NA	NA	NA	NA
WP_144427839.1\|2129331_2129679_+\|tail	phage tail protein	I6PBN7	Cronobacter_phage	2.4e-36	61.7
WP_015570920.1\|2129675_2130431_+\|tail	phage minor tail protein L	G8C7J7	Escherichia_phage	1.5e-115	77.2
WP_144427840.1\|2130432_2131143_+	peptidase P60	K7PLS6	Enterobacteria_phage	5.7e-141	96.6
WP_144427841.1\|2131176_2131806_+\|tail	tail assembly protein	K7PGY0	Enterobacteria_phage	4.2e-55	56.9
WP_144427842.1\|2131857_2135403_+	DUF1983 domain-containing protein	Q9MCU0	Escherichia_phage	0.0e+00	89.0
WP_017382568.1\|2135445_2135760_+	hypothetical protein	A0A2P0WA17	Enterobacter_phage	1.5e-32	64.7
WP_144427843.1\|2135760_2136432_+	hypothetical protein	A0A2P0WA07	Enterobacter_phage	8.4e-86	72.2
WP_017382566.1\|2136539_2136773_+	hypothetical protein	E4WL42	Enterobacteria_phage	3.9e-30	78.9
WP_144427844.1\|2136831_2138049_+\|tail	phage tail protein	K7PKG5	Enterobacteria_phage	1.7e-198	84.4
WP_144427845.1\|2138014_2138758_-	hypothetical protein	K7P6M1	Enterobacteria_phage	1.5e-59	70.8
WP_144427846.1\|2138814_2139582_-	hypothetical protein	K7P6T0	Enterobacteria_phage	1.7e-26	32.7
WP_045358105.1\|2139664_2140222_+	recombinase family protein	A0A1S6L009	Salmonella_phage	3.5e-77	78.7
WP_039270990.1\|2140394_2140814_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-35	56.7
WP_144427847.1\|2140815_2142084_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.4e-230	92.7
WP_144427848.1\|2142382_2144380_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	5.7e-21	25.9

DBSCAN-SWA_3

2980054 : 2988939

Tupanvirus(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_126805203.1\|2980054_2980666_+	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	A0A2H4UVM0	Bodo_saltans_virus	2.7e-14	29.3
WP_023303969.1\|2980705_2981686_-	LPS O-antigen chain length determinant protein WzzB	NA	NA	NA	NA
WP_049134169.1\|2981877_2982882_+	NAD-dependent epimerase	A0A2K9L0I7	Tupanvirus	3.8e-34	29.0
WP_003859477.1\|2982929_2984096_-	UDP-glucose 6-dehydrogenase	A0A1J0FA55	Only_Syngen_Nebraska_virus	4.1e-112	54.0
WP_049134171.1\|2984335_2985217_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.9e-104	62.7
WP_144427925.1\|2985217_2986303_-	dTDP-glucose 4,6-dehydratase	A0A291LAD7	Escherichia_phage	4.1e-98	51.7
WP_006811221.1\|2986392_2987799_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	5.2e-37	28.3
WP_023303974.1\|2987925_2988939_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	3.0e-87	48.3

DBSCAN-SWA_4

3382775 : 3426836

Salmonella_phage(45.65%)

terminase,holin,tail,integrase

attL 3378762:3378775|attR 3425049:3425062

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3378762:3378775	attL	NA	NA	NA	NA
WP_088567074.1\|3382775_3383258_-	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	7.0e-58	78.8
WP_063928602.1\|3383254_3383884_-	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	2.0e-105	90.0
WP_024203029.1\|3383873_3384167_-\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	9.2e-29	65.7
WP_040117937.1\|3384153_3384558_-	membrane protein	T1SA79	Salmonella_phage	1.3e-54	83.6
WP_047052272.1\|3384711_3385074_+	GtrA family protein	U5P0S6	Shigella_phage	4.4e-49	83.3
WP_088567075.1\|3385070_3385988_+	glycosyltransferase family 2 protein	U5P087	Shigella_phage	2.5e-157	90.7
WP_111996595.1\|3385984_3387442_+	hypothetical protein	NA	NA	NA	NA
WP_111996596.1\|3387472_3390178_-	hypothetical protein	G9L6E4	Escherichia_phage	7.3e-96	74.4
WP_032671830.1\|3390373_3390634_+	hypothetical protein	T1SA06	Salmonella_phage	1.7e-34	80.2
WP_059585505.1\|3390666_3390861_-	hypothetical protein	Q858F7	Salmonella_phage	1.7e-15	70.3
WP_088567077.1\|3390857_3393614_-	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	97.1
WP_088567078.1\|3393613_3395179_-	hypothetical protein	Q858F9	Salmonella_phage	1.6e-241	75.2
WP_088567079.1\|3395178_3397707_-	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	94.2
WP_032671835.1\|3397719_3398259_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	2.0e-61	73.9
WP_088567080.1\|3398258_3398723_-	hypothetical protein	T1SA73	Salmonella_phage	1.8e-79	90.3
WP_088567081.1\|3398722_3401200_-	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	95.4
WP_045342897.1\|3401199_3401805_-	hypothetical protein	A0A193GYT2	Enterobacter_phage	1.9e-100	86.6
WP_045342894.1\|3401804_3402128_-	hypothetical protein	A0A193GYH8	Enterobacter_phage	2.9e-36	71.8
WP_047050241.1\|3402179_3402554_-	hypothetical protein	G9L6C7	Escherichia_phage	1.1e-21	48.8
WP_045342888.1\|3402558_3402999_-	hypothetical protein	A0A193GYT9	Enterobacter_phage	4.1e-65	89.7
WP_045342886.1\|3403050_3404037_-	phage protein	G9L6C5	Escherichia_phage	2.8e-162	86.0
WP_088567082.1\|3404054_3404753_-	peptidase	G9L6C4	Escherichia_phage	1.5e-72	81.9
WP_045342883.1\|3404764_3405088_-	hypothetical protein	NA	NA	NA	NA
WP_111996597.1\|3405084_3405384_-	hypothetical protein	T1SBI9	Salmonella_phage	5.3e-32	71.9
WP_088567084.1\|3405380_3407051_-\|tail	phage tail protein	T1S9Z7	Salmonella_phage	4.4e-301	94.2
WP_032636549.1\|3407065_3407272_-	hypothetical protein	T1SA67	Salmonella_phage	1.3e-08	95.6
WP_088567085.1\|3408109_3408904_+	hypothetical protein	NA	NA	NA	NA
WP_088567086.1\|3408900_3410376_-\|terminase	terminase	Q858H3	Salmonella_phage	1.4e-287	95.9
WP_088567087.1\|3410372_3410975_-\|terminase	terminase small subunit	A0A193GYG6	Enterobacter_phage	6.4e-85	82.9
WP_088567088.1\|3411031_3411361_-	hypothetical protein	K7PGV5	Enterobacterial_phage	1.3e-28	60.8
WP_088567089.1\|3411634_3411982_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	2.8e-48	83.9
WP_088567090.1\|3411974_3412154_-	hypothetical protein	NA	NA	NA	NA
WP_088567091.1\|3412141_3412405_-	hypothetical protein	K7PKM4	Enterobacterial_phage	5.0e-10	64.8
WP_088567105.1\|3412604_3412988_-	DUF550 domain-containing protein	K7PGV7	Enterobacterial_phage	2.0e-44	74.6
WP_088567092.1\|3413520_3413898_-	ead/Ea22-like family protein	K7P6V8	Enterobacteria_phage	1.9e-10	50.0
WP_088567093.1\|3413894_3414461_-	hypothetical protein	NA	NA	NA	NA
WP_088567094.1\|3414842_3415187_-	DUF1064 domain-containing protein	T1SA23	Salmonella_phage	2.4e-60	96.5
WP_088567095.1\|3415307_3416138_-	Pyocin large subunit	T1SA92	Salmonella_phage	4.2e-119	79.5
WP_088567096.1\|3416147_3416900_-	hypothetical protein	M1FN76	Enterobacteria_phage	7.6e-136	89.2
WP_063150712.1\|3416896_3417100_-	hypothetical protein	Q858D5	Salmonella_phage	2.3e-23	84.4
WP_032634928.1\|3417247_3417478_-	hypothetical protein	A0A193GYK6	Enterobacter_phage	1.5e-31	84.0
WP_088567097.1\|3417632_3418223_+	transcriptional regulator	G9L6A6	Escherichia_phage	1.8e-79	75.0
WP_063149225.1\|3418520_3418820_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	8.8e-19	53.5
WP_088567098.1\|3418816_3419716_+	endonuclease	Q858E0	Salmonella_phage	1.1e-162	95.3
WP_088567099.1\|3419725_3420748_+	recombination protein RecT	Q858E1	Salmonella_phage	7.8e-184	97.4
WP_032634922.1\|3420796_3421045_+	AlpA family phage regulatory protein	A0A193GYW1	Enterobacter_phage	1.2e-32	79.3
WP_032634921.1\|3421154_3421451_+	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	8.1e-33	70.1
WP_088567100.1\|3421443_3421602_+	DUF1317 family protein	T1SAR0	Salmonella_phage	7.1e-20	88.5
WP_088567101.1\|3421598_3422246_+	adenine methylase	A0A193GYV6	Enterobacter_phage	3.0e-120	91.6
WP_047050290.1\|3422281_3423532_-\|integrase	site-specific integrase	G9L697	Escherichia_phage	1.4e-190	80.1
WP_006811514.1\|3423724_3425302_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
3425049:3425062	attR	NA	NA	NA	NA
WP_003860601.1\|3425369_3426836_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.0e-88	39.1

DBSCAN-SWA_5

3486524 : 3567930

Escherichia_phage(23.91%)

portal,tRNA,lysis,plate,integrase,capsid,holin,tail,head,terminase

attL 3529005:3529021|attR 3559592:3559608

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023295164.1\|3486524_3487064_-\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
WP_017383550.1\|3487088_3487724_-	acid phosphatase AphA	NA	NA	NA	NA
WP_015572146.1\|3487727_3489092_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_017692906.1\|3489101_3489998_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_003860702.1\|3490116_3490965_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_003860704.1\|3491021_3491282_+	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.4e-17	51.2
WP_015572144.1\|3491278_3491659_-	holo-ACP synthase	NA	NA	NA	NA
WP_015572143.1\|3491658_3492390_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_015572142.1\|3492465_3493173_-	DNA repair protein RecO	NA	NA	NA	NA
WP_126805082.1\|3493190_3494096_-	GTPase Era	NA	NA	NA	NA
WP_003860711.1\|3494092_3494773_-	ribonuclease III	A0A2P0VNZ5	Tetraselmis_virus	9.6e-21	39.0
WP_047732551.1\|3494996_3495959_-	signal peptidase I	NA	NA	NA	NA
WP_003860714.1\|3495974_3497780_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	1.1e-23	25.9
WP_006811609.1\|3497965_3498442_-	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_003860717.1\|3498438_3499392_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_015572138.1\|3499391_3500042_-	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_006176728.1\|3500073_3500649_-	RNA polymerase sigma factor RpoE	A0A0F6TH34	Sinorhizobium_phage	8.2e-05	28.1
WP_017692868.1\|3501074_3502694_+	L-aspartate oxidase	NA	NA	NA	NA
WP_144427958.1\|3502678_3503416_-	methyltransferase	NA	NA	NA	NA
WP_017383554.1\|3503548_3504877_+	ATP-dependent RNA helicase SrmB	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.7e-48	33.5
WP_003860727.1\|3504930_3505314_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	2.1e-33	71.8
WP_003860729.1\|3505629_3506319_+	uracil-DNA glycosylase	A0A076JX67	Equid_alphaherpesvirus	7.9e-55	48.8
WP_017383555.1\|3506358_3507444_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_032649129.1\|3507648_3508068_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-13	37.2
WP_015572132.1\|3508138_3508837_+	DTW domain-containing protein	NA	NA	NA	NA
WP_126805084.1\|3508872_3511536_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_126805087.1\|3511645_3513001_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_003860739.1\|3513046_3513370_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_017383558.1\|3513366_3514674_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.5e-43	29.6
WP_017692863.1\|3514825_3515278_-	DUF4385 domain-containing protein	M4QHR1	Cyanophage	1.3e-34	50.0
WP_017692862.1\|3520806_3523380_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.7
WP_126804714.1\|3523509_3524241_-	polyphenol oxidase	NA	NA	NA	NA
WP_017383977.1\|3524237_3525218_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_003863164.1\|3525349_3526087_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_003863162.1\|3526354_3526696_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_100229775.1\|3526800_3526848_+	hypothetical protein	NA	NA	NA	NA
WP_015571567.1\|3526955_3528116_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_017383978.1\|3528112_3528985_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
3529005:3529021	attL	NA	NA	NA	NA
WP_023323577.1\|3529129_3529351_-	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	4.9e-27	72.6
WP_109909770.1\|3529427_3530597_-	phage late control D family protein	Q6K1G4	Salmonella_virus	2.3e-179	81.9
WP_063132915.1\|3530593_3531058_-\|tail	phage tail protein	A0A218M4I2	Erwinia_phage	2.5e-60	72.7
WP_144427959.1\|3531068_3533519_-\|tail	phage tail tape measure protein	Q858U7	Yersinia_virus	1.1e-305	76.0
WP_017382998.1\|3533508_3533631_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	5.9e-14	89.7
WP_032659931.1\|3533663_3533987_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	1.2e-24	65.2
WP_023295232.1\|3534044_3534563_-\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	2.9e-78	81.4
WP_023323582.1\|3534575_3535769_-\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	2.4e-184	81.1
WP_032659926.1\|3536143_3536575_-\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	1.2e-16	39.6
WP_144427960.1\|3536576_3538925_-\|tail	phage tail protein	A0A0F7LDR4	Escherichia_phage	1.7e-112	50.6
WP_026080583.1\|3538936_3539467_-\|tail	phage tail protein I	Q37841	Escherichia_phage	2.8e-92	88.1
WP_144427961.1\|3539459_3540368_-\|plate	baseplate assembly protein	A0A0F7LCQ9	Escherichia_phage	1.1e-133	82.8
WP_144427962.1\|3540373_3540724_-\|plate	baseplate assembly protein	A0A0M4RE59	Salmonella_phage	3.6e-40	72.4
WP_144427963.1\|3540720_3541356_-\|plate	phage baseplate assembly protein V	A0A2I8TV69	Erwinia_phage	4.8e-99	86.3
WP_060614460.1\|3541626_3542526_+	hypothetical protein	NA	NA	NA	NA
WP_060614459.1\|3542589_3543036_-	phage virion morphogenesis protein	O80313	Escherichia_phage	1.5e-46	65.3
WP_060614458.1\|3543028_3543496_-\|tail	phage tail protein	A0A218M4K6	Erwinia_phage	3.0e-58	68.4
WP_072204597.1\|3543458_3543704_-\|holin	holin	S4TNY4	Salmonella_phage	9.4e-27	72.8
WP_058687916.1\|3543591_3544008_-\|lysis	LysB family phage lysis regulatory protein	A0A218M4K2	Erwinia_phage	7.1e-43	68.0
WP_144427964.1\|3544007_3544439_-	lysA protein	A0A218M4L6	Erwinia_phage	5.6e-59	79.0
WP_144427965.1\|3544435_3544948_-	glycoside hydrolase family protein	A0A218M4K3	Erwinia_phage	1.0e-83	88.8
WP_144427966.1\|3544931_3545153_-	primosomal protein	A0A218M4L5	Erwinia_phage	2.7e-25	72.6
WP_017382979.1\|3545143_3545347_-\|tail	tail protein	Q858W3	Yersinia_virus	3.3e-25	79.1
WP_080469633.1\|3545346_3545853_-\|head	head completion/stabilization protein	O80306	Escherichia_phage	1.7e-62	70.8
WP_063940391.1\|3545952_3546708_-\|terminase	terminase endonuclease subunit	Q6K1I5	Salmonella_virus	6.4e-74	64.1
WP_047721716.1\|3546711_3547779_-\|capsid	phage major capsid protein, P2 family	A0A0M4R4W2	Salmonella_phage	2.8e-168	83.3
WP_017382975.1\|3547834_3548689_-\|capsid	GPO family capsid scaffolding protein	S4TP53	Salmonella_phage	2.4e-114	73.6
WP_045339905.1\|3548854_3550624_+\|terminase	terminase ATPase subunit family protein	A0A218M4M1	Erwinia_phage	9.4e-302	85.6
WP_144427967.1\|3550625_3551651_+\|portal	phage portal protein	Q6K1J0	Salmonella_virus	6.7e-167	82.4
WP_116329066.1\|3552421_3553513_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_116329072.1\|3553527_3554016_-	phosphohistidine phosphatase	NA	NA	NA	NA
WP_023323606.1\|3556423_3556699_-	DUF5405 family protein	M1TAP2	Escherichia_phage	2.2e-24	59.3
WP_044596220.1\|3556715_3556931_-	DUF2732 family protein	NA	NA	NA	NA
WP_023323608.1\|3556995_3557496_-	hypothetical protein	M1SV55	Escherichia_phage	8.5e-83	89.2
WP_032627926.1\|3557486_3557666_-	hypothetical protein	S4TNZ7	Salmonella_phage	6.2e-12	66.7
WP_023295263.1\|3557668_3557941_-	hypothetical protein	Q1JS20	Enterobacteria_phage	3.4e-38	82.2
WP_023295264.1\|3558100_3558394_+	helix-turn-helix transcriptional regulator	Q1JS21	Enterobacteria_phage	7.7e-36	71.1
WP_044596219.1\|3558463_3559444_+\|integrase	tyrosine-type recombinase/integrase	S4TP66	Salmonella_phage	4.0e-153	81.0
WP_006811631.1\|3559632_3560754_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
3559592:3559608	attR	NA	NA	NA	NA
WP_006811632.1\|3560764_3561835_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.5e-89	51.5
WP_126804715.1\|3562047_3562422_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_032619208.1\|3562575_3563112_+	YfiR family protein	NA	NA	NA	NA
WP_017692859.1\|3563104_3564325_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_017382956.1\|3564337_3564823_+	OmpA family protein	NA	NA	NA	NA
WP_126804716.1\|3564825_3566196_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_126804717.1\|3566234_3566639_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_002914145.1\|3566771_3567119_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_003863138.1\|3567162_3567930_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP041734

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP041733

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection