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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP041732 Alcaligenaceae bacterium SJ-26 chromosome, complete genome 1 crisprs DEDDh,DinG,RT,csa3 0 2 2 0

Results visualization

1. NZ_CP041732
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041732_1 2713997-2714144 Orphan I-F
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP041732_1 1.1|2714025|32|NZ_CP041732|CRISPRCasFinder 2714025-2714056 32 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 4783319-4783350 8 0.75
NZ_CP041732_1 1.1|2714025|32|NZ_CP041732|CRISPRCasFinder 2714025-2714056 32 NZ_CP020540 Sphingobium herbicidovorans strain MH plasmid pSHV1, complete sequence 155154-155185 9 0.719
NZ_CP041732_1 1.2|2714085|32|NZ_CP041732|CRISPRCasFinder 2714085-2714116 32 NZ_CP012399 Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence 586860-586891 9 0.719

1. spacer 1.1|2714025|32|NZ_CP041732|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.75

ttgttgacaccaccttggatgatcgccatgac	CRISPR spacer
ccgtcgacaccaccttcgatgatcgccgcgcg	Protospacer
..**.*********** **********..*  

2. spacer 1.1|2714025|32|NZ_CP041732|CRISPRCasFinder matches to NZ_CP020540 (Sphingobium herbicidovorans strain MH plasmid pSHV1, complete sequence) position: , mismatch: 9, identity: 0.719

ttgttgacaccaccttggatgatcgccatgac	CRISPR spacer
accttgacaccgccttcgatgatcgcgcgggc	Protospacer
 . ********.**** *********   *.*

3. spacer 1.2|2714085|32|NZ_CP041732|CRISPRCasFinder matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 9, identity: 0.719

gtgcagttcaacagggacttccccggttgctg	CRISPR spacer
ctgcagttcaaccgggacttcaccttcgacgg	Protospacer
 *********** ******** **  . .* *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 841535 : 900149 50 Agrobacterium_phage(25.0%) protease,plate NA
DBSCAN-SWA_2 1820968 : 1917291 120 Pseudomonas_phage(19.4%) protease,portal,capsid,tail,holin,tRNA,terminase,head,integrase,plate attL 1834298:1834313|attR 1915839:1915854
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage