CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP041944	Lactobacillus paracasei strain NJ chromosome, complete genome	2 crisprs	DEDDh,cas3,csa3,DinG,WYL,csa5gr11,cas1,cas2,csn2	0	15	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041944_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041944_1

2120454-2122271

TypeII-A

Consensus_repeat	Method
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	PILER-CR
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CRISPRCasFinder
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CRT

27 spacers

csn2,cas2,cas1

The CRISPR arrays of NZ_CP041944_1

>merge|NZ_CP041944|1|2120454-2122271|PILER-CR,CRISPRCasFinder,CRT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCAACAGCTTTCCCGCAGATTCAGCATCGCTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCTTCATCTAATGATGAATTAACTAACAAGTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGCAATTTAATTTATAACCCAAGTTTATCACGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGAGTTTTAAGGTGATCAGAATGTATCGAGAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAATTCTTGACCCCATGATTGAGACGTATCTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCTTCGTTGATGAGATGATCGAGCATAAACAAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCAATGCCGGGGGTCCAACCATAGCCTGTGTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCATCGTACCCTCACAAAAGCTAACGCCGGCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCTTTTATGAAGAACTGTTTACACCGGTTATGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCTCTTCAAGGTCTTGTGTGGCAATAGCGTTTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCTCAATATAACTCGCATCATAATCAAGATTAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGGGATTGTGGGCTGACGATAGATATACGCTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCTAACCTTGGCTGTGAATACTGGAGGCGTCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGTAAAACCATCATTCGTCTTGGAGTCAATCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCATATTGACGTTGTGAACGTTGCATTTCTGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCTTACGTCAACGGTTATACCGTGCGCAAGGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAAGGGTTAGCGCCACTTAATCCTGACAACTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAAAGCAAAGGCTTACGTTCAGGCGATTGAATCCGGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCACCCAGTTTCCTCGTTGCGCAGATGTTTGTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCGCCTGAACATTGCATCGATGGTTTGATCAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGTTGGTGGCAGCGATTCATTGCTGACGTCCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAAAGCGTTCGCTTTGATATATCAAAATTAGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAAGGGTTAGCGCCACTTAATCCTGACAACTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAAAGCAAAGGCTTACGTTCAGGCGATTGAATCCGGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCACCCAGTTTCCTCGTTGCGCAGATGTTTGTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCCGAGAAGGTCGGACGATCAACTACTTTCGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAGGAAATTCGAGTTCTTCCCGCAATTGATGCTCTCAGGTAGATGCCGAATCAATCAGTTGAATTCC

>NZ_CP041944|1|1|2120454-2122205|PILER-CR
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CAACAGCTTTCCCGCAGATTCAGCATCGCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTCATCTAATGATGAATTAACTAACAAGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCAATTTAATTTATAACCCAAGTTTATCAC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAGTTTTAAGGTGATCAGAATGTATCGAGA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AATTCTTGACCCCATGATTGAGACGTATCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TTCGTTGATGAGATGATCGAGCATAAACAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CAATGCCGGGGGTCCAACCATAGCCTGTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CATCGTACCCTCACAAAAGCTAACGCCGGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTTTATGAAGAACTGTTTACACCGGTTAT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCTTCAAGGTCTTGTGTGGCAATAGCGTTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCAATATAACTCGCATCATAATCAAGATTA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GGGATTGTGGGCTGACGATAGATATACGCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAACCTTGGCTGTGAATACTGGAGGCGTC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTAAAACCATCATTCGTCTTGGAGTCAATC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CATATTGACGTTGTGAACGTTGCATTTCTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTACGTCAACGGTTATACCGTGCGCAAGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGGGTTAGCGCCACTTAATCCTGACAACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAAAGC	AAAGGCTTACGTTCAGGCGATTGAATCCGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCCAGTTTCCTCGTTGCGCAGATGTTTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGCCTGAACATTGCATCGATGGTTTGATCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTTGGTGGCAGCGATTCATTGCTGACGTCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAAGCGTTCGCTTTGATATATCAAAATTAG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGGGTTAGCGCCACTTAATCCTGACAACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAAAGC	AAAGGCTTACGTTCAGGCGATTGAATCCGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCCAGTTTCCTCGTTGCGCAGATGTTTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CCGAGAAGGTCGGACGATCAACTACTTTCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC

>NZ_CP041944|1|1|2120454-2122271|CRISPRCasFinder
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CAACAGCTTTCCCGCAGATTCAGCATCGCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTCATCTAATGATGAATTAACTAACAAGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCAATTTAATTTATAACCCAAGTTTATCAC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAGTTTTAAGGTGATCAGAATGTATCGAGA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AATTCTTGACCCCATGATTGAGACGTATCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TTCGTTGATGAGATGATCGAGCATAAACAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CAATGCCGGGGGTCCAACCATAGCCTGTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CATCGTACCCTCACAAAAGCTAACGCCGGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTTTATGAAGAACTGTTTACACCGGTTAT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCTTCAAGGTCTTGTGTGGCAATAGCGTTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCAATATAACTCGCATCATAATCAAGATTA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GGGATTGTGGGCTGACGATAGATATACGCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAACCTTGGCTGTGAATACTGGAGGCGTC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTAAAACCATCATTCGTCTTGGAGTCAATC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CATATTGACGTTGTGAACGTTGCATTTCTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTACGTCAACGGTTATACCGTGCGCAAGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGGGTTAGCGCCACTTAATCCTGACAACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAAAGC	AAAGGCTTACGTTCAGGCGATTGAATCCGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCCAGTTTCCTCGTTGCGCAGATGTTTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGCCTGAACATTGCATCGATGGTTTGATCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTTGGTGGCAGCGATTCATTGCTGACGTCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAAGCGTTCGCTTTGATATATCAAAATTAG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGGGTTAGCGCCACTTAATCCTGACAACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAAAGC	AAAGGCTTACGTTCAGGCGATTGAATCCGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCCAGTTTCCTCGTTGCGCAGATGTTTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CCGAGAAGGTCGGACGATCAACTACTTTCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AGGAAATTCGAGTTCTTCCCGCAATTGATG
CTCTCAGGTAGATGCCGAATCAATCAGTTGAATTCC

>NZ_CP041944|1|1|2120454-2122271|CRT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CAACAGCTTTCCCGCAGATTCAGCATCGCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTCATCTAATGATGAATTAACTAACAAGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GCAATTTAATTTATAACCCAAGTTTATCAC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GAGTTTTAAGGTGATCAGAATGTATCGAGA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AATTCTTGACCCCATGATTGAGACGTATCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TTCGTTGATGAGATGATCGAGCATAAACAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CAATGCCGGGGGTCCAACCATAGCCTGTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CATCGTACCCTCACAAAAGCTAACGCCGGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTTTATGAAGAACTGTTTACACCGGTTAT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCTTCAAGGTCTTGTGTGGCAATAGCGTTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCAATATAACTCGCATCATAATCAAGATTA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GGGATTGTGGGCTGACGATAGATATACGCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAACCTTGGCTGTGAATACTGGAGGCGTC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTAAAACCATCATTCGTCTTGGAGTCAATC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CATATTGACGTTGTGAACGTTGCATTTCTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTACGTCAACGGTTATACCGTGCGCAAGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGGGTTAGCGCCACTTAATCCTGACAACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAAAGC	AAAGGCTTACGTTCAGGCGATTGAATCCGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCCAGTTTCCTCGTTGCGCAGATGTTTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGCCTGAACATTGCATCGATGGTTTGATCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTTGGTGGCAGCGATTCATTGCTGACGTCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAAGCGTTCGCTTTGATATATCAAAATTAG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGGGTTAGCGCCACTTAATCCTGACAACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAAAGC	AAAGGCTTACGTTCAGGCGATTGAATCCGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCCAGTTTCCTCGTTGCGCAGATGTTTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CCGAGAAGGTCGGACGATCAACTACTTTCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AGGAAATTCGAGTTCTTCCCGCAATTGATG
CTCTCAGGTAGATGCCGAATCAATCAGTTGAATTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041944.1\|WP_144182216.1\|2119458_2119755_+\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NZ_CP041944.1\|WP_003584830.1\|2105604_2106618_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|376764
NZ_CP041944.1\|WP_003584827.1\|2112293_2113088_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041944.1\|WP_003580488.1\|2123803_2124229_+\|NusG-domain-II-containing-protein	unknown	unknown	gnl\|CDD\|227646
NZ_CP041944.1\|WP_003566934.1\|2122551_2123652_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041944.1\|WP_003580480.1\|2127882_2128740_+\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|170086
NZ_CP041944.1\|WP_144182153.1\|2126113_2127745_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP041944.1\|WP_003586311.1\|2117512_2118418_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP041944.1\|WP_003584829.1\|2108337_2110065_+\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|227320
NZ_CP041944.1\|WP_144182154.1\|2129191_2131030_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|273919
NZ_CP041944.1\|WP_003566940.1\|2110528_2110903_-\|YxeA-family-protein	unknown	unknown	gnl\|CDD\|377665
NZ_CP041944.1\|WP_003580470.1\|2135256_2136588_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224169
NZ_CP041944.1\|WP_003580474.1\|2132775_2133342_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP041944.1\|WP_003580476.1\|2131200_2132649_+\|family-1-glycosylhydrolase	unknown	unknown	gnl\|CDD\|236580
NZ_CP041944.1\|WP_003571227.1\|2106614_2108357_+\|thiol-reductant-ABC-exporter-subunit-CydD	unknown	unknown	gnl\|CDD\|227321
NZ_CP041944.1\|WP_016381600.1\|2124425_2126117_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|227321
NZ_CP041944.1\|WP_003566944.1\|2110136_2110460_-\|DUF4870-domain-containing-protein	unknown	unknown	unknown
NZ_CP041944.1\|WP_003586316.1\|2119751_2120429_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
NZ_CP041944.1\|WP_144182155.1\|2133632_2135051_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP041944.1\|WP_003571221.1\|2111126_2112293_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP041944.1\|WP_144182216.1\|2119458_2119755_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.5603e-19
NZ_CP041944.1\|WP_003584830.1\|2105604_2106618_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	7.22643e-91
NZ_CP041944.1\|WP_003580480.1\|2127882_2128740_+\|PRD-domain-containing-protein	gnl\|CDD\|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	1.02475e-34
NZ_CP041944.1\|WP_003580488.1\|2123803_2124229_+\|NusG-domain-II-containing-protein	gnl\|CDD\|227646	COG5341, COG5341, Uncharacterized protein conserved in bacteria [Function unknown].	3.3644e-34
NZ_CP041944.1\|WP_144182153.1\|2126113_2127745_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.38379e-91
NZ_CP041944.1\|WP_003566940.1\|2110528_2110903_-\|YxeA-family-protein	gnl\|CDD\|377665	pfam06486, DUF1093, Protein of unknown function (DUF1093). This family consists of several hypothetical bacterial proteins of unknown function.	3.24145e-19
NZ_CP041944.1\|WP_003584829.1\|2108337_2110065_+\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	4.4558e-158
NZ_CP041944.1\|WP_144182154.1\|2129191_2131030_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	0
NZ_CP041944.1\|WP_003580470.1\|2135256_2136588_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224169	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion].	2.26205e-107
NZ_CP041944.1\|WP_003580474.1\|2132775_2133342_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.1683e-11
NZ_CP041944.1\|WP_003580476.1\|2131200_2132649_+\|family-1-glycosylhydrolase	gnl\|CDD\|236580	PRK09593, arb, 6-phospho-beta-glucosidase; Reviewed.	0
NZ_CP041944.1\|WP_003571227.1\|2106614_2108357_+\|thiol-reductant-ABC-exporter-subunit-CydD	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
NZ_CP041944.1\|WP_016381600.1\|2124425_2126117_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	6.00819e-92
NZ_CP041944.1\|WP_003586316.1\|2119751_2120429_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.15445e-80
NZ_CP041944.1\|WP_144182155.1\|2133632_2135051_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	8.79052e-65
NZ_CP041944.1\|WP_003586311.1\|2117512_2118418_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	8.31092e-89

>NZ_CP041944.1|WP_003586316.1|2119751_2120429_+|type-II-A-CRISPR-associated-protein-Csn2
MNLAYYPFQLITTKPSEVTVIDTASPKVLTDLIEALRNDLDKVVLSNDQLEPQEIRKASLWIGDPMLELDLDKLFQRLIYKRMELLIENQRLVELIDQSQQMAMYLLQDPFLSDLPVTVEPGGKLEQIMKYCNVHFDEAVTTESISKIEALIQTLTKLEEKKLVILTNVSHYLSARDFFAVTEQIGDTELQVILIEFSKVNRKKYFEKCQYIYIDEDFVDSRELD
>NZ_CP041944.1|WP_144182216.1|2119458_2119755_+|CRISPR-associated-endonuclease-Cas2
MQSRDLPVLTSENRRNYRKFRKALINEGFLMMQYSIYVRVCSTKKSAEFLEHRIAAMKPPIGTVQTLMVTEAQYQAMHFLVGEAKQDIRNSADRTVII
>NZ_CP041944.1|WP_003586311.1|2117512_2118418_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRSLIVTQHCKVTTKNRTLVVQTDGEVNNVPIEDINQVVFTTTRALLSADAITTLAEANAKVIFSGRDGQPVTETTNLYSDRRKADLVRLQVNWPKSLVENLWTKIVAAKVSNQAQVTKLCGYDNQSLLDDLDTLEINDHSNREATAARKYFKLIFGDDFSRSDICATNAALNYGYSILLSTTNRAIVSAGHITEIGMHHSSVANQYNLGSDLMEPFRPAIDYWVANQKFTDLTPNIKYGLIALLNLEVTFNGKKALLQNALDEHVENCLAYLDGKRNNCRIEVEFPNEVSSDAFNDHV
>NZ_CP041944.1|WP_003584827.1|2112293_2113088_+|hypothetical-protein
MEATKLAKRKQWPVPFSQTEPHFTFNNWLKFFSVVLFAYLLFYTRNPIGGFFNMSGTTFLNVANGWTRAVVVFGGVLYCAIIFAGAVWAAGWDGLSQLFASFRWRDIWYVFAYGILYLIATTLGGILGDLVPIRFGVDFVNTLEAAQFGNLGAFSLISFRAFFMTLATQLTAVMIFLASQQLFSRLATKHRRWALFLTYLLALTVTAVVTTTPLAPHVFVNIASGLIAQLPLYWVYRRSRNILVVTLSAFILMHVMIGLAVMLG
>NZ_CP041944.1|WP_003571221.1|2111126_2112293_+|hypothetical-protein
MSRQNLMILIVDLVLIIIFIGGFGWGIGTVKRYQVEPNTSRTETNTDSLYSESRFEKTLQKFKRLDLMVRLGPVKDAKTFNYTPDEFNVKYSSQPIVSGLKATKTLNAETGEVEVCTTMTPQGVTVAGDYLLTTAYDHDGFHNSVMYIQDLKTGKLLNTVVLNGRPHVGGLTYDAKNDNIWICGRRNNAAEVFAIKLKTALTYNVDKKAKAVAYSQRAQLGNISRASFVTYYENALFVGFFNPTGKGNIQRYPLNDKGQVVGKSLTSSISNQFDVLTQSVLHQDILSKIQGMAFYGDYTILSQSYGGGNSTLYIFKTDPKKTIFRASDAIDTFDMPSHLEQISTHDGRMYMMFESAAYAYRHRSTNQLDRVLSMNLEGFVQLVLKEEK
>NZ_CP041944.1|WP_003566940.1|2110528_2110903_-|YxeA-family-protein
MNMKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYAYTQMAYDEKGHGTEVDFNGHKSRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKLNR
>NZ_CP041944.1|WP_003566944.1|2110136_2110460_-|DUF4870-domain-containing-protein
MTNEHKVLRGLSYISVIFAPILFPILVWIFTPQGSVTRDTAKHALWLHIIPTLLSIFIFMIIGGVGFFTNSINATSAVSLILLLVAMVVDIGMVVYNIYTGIKIITS
>NZ_CP041944.1|WP_003584829.1|2108337_2110065_+|thiol-reductant-ABC-exporter-subunit-CydC
MHWLKNEHWVRPDLKRYRGLLFWSLILGVMTFVFAGALMFTSGFLIDKSATKPLFAAIYVTVVLTRAFGIGRPVFQYIERLTSHNWVLRITSHMRRKLYKVLETDAAFVSEHHQTGDILGLLADDIGHIQNLYLRMIFPTVVGAGLTVIATLLLGWFNWGCALWIMLLLLFQVLILPWWGLVVERFRKAEQKQLNHDAYVSLTDSVLGLSDWVITHREKDFMSQSLAAPKKLAASTVKSKRFQWRRDFVGQLLFVLIVISMLIWTNLEWTGNQASANWVGAFVLVVFPLDQAFSGIAQGVGEWPTYRDAIRHLNDLQPVTRQLPQQQAVPTQFKEMTLQHLSFQYTPKDPELITDIDLTVHSGEKIAILGPSGMGKTTLLQLVLGDLTPTTGNVLVDGQDVLTYQQHRTNLFAVLDQSPFLFNTSIVNNVRLGNEQASDADVAAALKAVKLDQLVAQLPNGINSSVEEAGFGFSGGERQRLSLARILLQDAPIVLLDEPTVGLDPITEQALLETMFTVLQGKTILWVTHHLQGVNQTDRVIFLEDGRLTMNDTPSHLAKNDERYQNLYALDAGLR
>NZ_CP041944.1|WP_003571227.1|2106614_2108357_+|thiol-reductant-ABC-exporter-subunit-CydD
MIDKTLMRLSGMKRIMTMLAGFALVQAFVILLQGKFLAEGIVHSWNRQSLAGLWLPLGLFATAFVIRQLIVWVRNRIGARFAMTSSAWLQAQLLKHLYALGPAAVAKEGTGNLVTMALDGIPEAENYIELILNKILNMSIIPWVLVAYIWYENWLTGFTLLIMFPIIILFMVILGLAAQDKSESQYAGFQKMSNHFIDSLRGLKTLQLMGISRQYANNVYDVSEDYRKQTMGVLRIAMLSTFALDFFTTLSIAVVAVFLGIKLMDGAIPLYPAMVALILAPEYFMPIRDFGTDYHATLNGKNAMKAIWQVIDQPLPTDTNVLPAFSRWQAQDTVTINHLDFTYPNERAGIQDANLQFTGTEKVAIIGASGSGKSTLLNLIGGFLQPQKAAMTVRGTKVPHMTQAAWQDHLSYIPQDPYLFADTIAANIRFYRPDASDEDVKQAAEAAGLSHWIETLADGYATRIGEGGRGISGGQAQRIALARTLIDTNRSIWLFDEPTAHLDIETEAELKETLVPLFKNRLVIFATHRLHWLNQMDRVIVVDGGKIIAEGTPSELAAHSKPYQALVHEMRGEFNALVEK
>NZ_CP041944.1|WP_003584830.1|2105604_2106618_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MSWLQILWFFLLFVLFSGFFVLEGFDFGVGMSTKLLARNSDEEDQLVATIGPHWDGNEVWLITAGGAMFASYPMWYASLFSGFYIMFFLVLFGLIVRGVSFEFAAHAETKRGRNIWRWALACGSLIPPFILGMIFTAIIQPLPITKAGDVYPTLGNQINLLTIVGGVAVTLMMLMHGLNFIRLKTTGDLRKRARDWNSKLYYLLYAGEIVFAVLLFFMTDFFKERPISTLLILVVIVGSTVAAHVGVLKDNEVLSFVGSALGLVGVVGVIFNGLFPRVMIGQDAAMSILVKDASASPLTLTIMTIVAVILLPIALAYFIWSYVVFHKRIQAKGAVSE
>NZ_CP041944.1|WP_003566934.1|2122551_2123652_+|hypothetical-protein
MKKLIVLSATLLVSMGLAACSSGSSSSSSKSSSTTSQTSNAKVKINTGADASAKVPAAGTLVMRQLYAAPHGKQSFAAVNVTLNGDTIVSAKIDEFQYVKKSSDWTGVPNSNKDFGKSYPKGQFLIAKAENSKPYSALMKKEAKATHTWEENETAITNFVKGKKIEDLKADVAKVKDTKKVSDVVSGATFADTAGYLQAIYDAATTGMVAEGIQTTDNTITEGQVLAAPHGTQSFGIVTVAMQGDKIANVFLDEFQYMPSKDFGGVPNSNADFGKGIKSGTVLASKRANSEAYSAIMKSKGKATQTWQENSNAIDEFAKGKTIAELETAVSDLKGKKKVSDVVSGATFTDTSGYLTAIISAAKAAK
>NZ_CP041944.1|WP_003580488.1|2123803_2124229_+|NusG-domain-II-containing-protein
MRWLKKYVRPFDYVIIIVLFVACFLPVGIFSLTEANVNTNQKVAVISINGHVKRRIQLTTHTRHQQFTLYPAKGQYNIIEVQGARIRDKEDNSPDQIAVHTGWISQIGQQSICLPHKLLIEIKPAQAGTGTSGDTGGLVHP
>NZ_CP041944.1|WP_016381600.1|2124425_2126117_+|ATP-binding-cassette-domain-containing-protein
MLGLLKYGRDQRWAGVIETVFDWLPTLLPIMIALNFAAKRPGNALIITVILVLIWLGYVIGYERHHRHAWAMSAKRELRDHYFEALYQRNNAGDATAADNAVIQRDLGGLNNLDMFYSTLFPTLIQAGLTFLLLIGLSVWYGSWLAFLPLACVFLIGFAMMFLGKKMSAQNKAHLAGFLRMGGRFMNDLSGMNTLVMYNAADRYAKKFADDSEYFRQATMNLLRTQLQVLFVINGFVYLTVFAGGFVTALQLAAGQLPAAGAFATWFALAMMMVNARQLGYFFHVVKSNGPALAGILATIAKSKTTPATVKITDNRPLKQLVLQDVAIGYEADAPLVSDINATLVPGMLYGLAGENGTGKSTLTQALLGQLTPLSGTIMADNTPVTALSNAQRAAVFGYVAANDYIFSGTIKENLLLGNQFGDQWQQHLDELGLMHFVTDLQDGYATEVGEGGRLLSPGQRQQLAFARMLLADKTVYLLDEMTSSIDAANAAIILAAIKRLSRQKIVLFISHDLSAMAEADVVWFIHDHQLISADHAQLYRDQPAYRHLVDNPEAMLKEGQPS
>NZ_CP041944.1|WP_144182153.1|2126113_2127745_+|ATP-binding-cassette-domain-containing-protein
MIRSLLRYTHHLTGAIIISFLIGLVAELTKVVVLVLAAMMLFDPQNASHLLIPGIIAVVIVGLGSFGEQYAGHFVAFHVLAELRGAVYRKLVQLAPAKLDSQGSGKLLKLIGSDIEAMEIFYAHTIVPVAIGLIYGVLMVAVYSSLNGPAAAVVLVSYAAVGLLIPYYRHEQMTAKAQAADRQKAVNQQYLLESVRGMAVLRQLEVADARMKTGNEGFDHEATAFQQSQFGQLLKNMSATLVMLVAWLFIVWLSGWTQPQPLQQALLAVFPLTFGPLLALTNLPASLLNGFAAARNLLNLLQEVPATSAAIDATRTLNQIAIIQVDHVTFKYPSRDETVLRQVSLSLHAGEIVGFVGASGSGKSTLAKLIMGWYPLTQGRILIDGIDLTKIDPASLRAQVNYLPQTPVFFSESVRDNLTLHDATITDAQIWTVLNQVKLTSRLRQAKKGLDENVVSGQLQFSSGEQQRLELARALLHPSSVLVLDEPTSNLDTENERLILDAIKAYYHGIVIMISHRAESAAYADRLYRFADHQVSAASTEPK
>NZ_CP041944.1|WP_003580480.1|2127882_2128740_+|PRD-domain-containing-protein
MIIQNVLNNNAVVARHQQREVIVVERGIGFRAKKDAKMALRDSMKVYVPEDQAKLKIATATIASLPSAYLDLAAGIIQEAEKRLQTTFKSYLLIELADHVHFAVQRLYEKIVLHNKLLWEIQVAYTQEYEMGEWALHQIAAQLHEQLPEDEAGFIALKFVSNDLNHQQTVNSLAFTQTLASLTKIIFYNLGLDMNVKTPDYQRLVIHLKFFLQRMYAAAPSPLSLKMENYDYVLLKHLQQDYARAYHCMEDVDRFMQQKLAIAIPKNEQIYLTMHIARLAKSLAE
>NZ_CP041944.1|WP_144182154.1|2129191_2131030_+|PTS-glucose-transporter-subunit-IIA
MNESGLAQQLLNLIGGKQNINQVWHCATRLRFTLKDRAKVPKDKIEALDGVITVVEASGQFQVVIGNNVGDVYHEVVKLEPSLSEGETSGETAAQGKMTFKSAFNSLLTFISGVFTPFLGAMAGAGILKGLLSLAVVMGWLTAKSGAYQIWWAAADGIFYFLPIALAFTAAKQLKVNQFVSMAIAAAMVSPGIVALGAKATTIDFFGIPVVPANYTATVLPILLVVVVQKFLEPVFNKLWHESVRNILAPVCLLVVIVPLTLIVVGPISATVSSWLATAIVSLNKSVPILAGLVLGGFWQVIVIFGVHWALVPVMMNNIAQNGTDLMMPILLPAVLSQAGAALAVFLRTRDAKMKSLAGSSTITALFGITEPTIYGITLKLKKPFYLACVAGAVGGMIVAISGAGANAAALASVLSPPTFIGKGFGLSVVGDVVAFALGTVLTYFFGGINAGAKAKTSPSANSELGEALAAPVKGVLVPLTGLADEVFASETMGKGVAIVPENGMVKAPVAGVIRLLYPTGHAIGIQSDKGSEILIHIGIDTVNLKGKHFQPLVAQGQHVEIGTPLVQFDHEAIEKEGYESTVMMIVTNSDQYQIATLGQGATDDRPVMTLA
>NZ_CP041944.1|WP_003580476.1|2131200_2132649_+|family-1-glycosylhydrolase
MTYLNFPKNFLWGGATAANQLEGAYQEDGKGLSIADVLPQGKDRFTIVNRPDFNWTIDKSKYRYPNHQGIDHYHRFKEDIKLFSEMGFKCYRFSIAWSRIFPEGDEKTPNASGLKFYDEVIATCLKYDIEPVVTISHYEMPLHLVTKYGGWKNKRLIEFYKHFAETVLTRYFKQVKYWMTFNEINSAWAFPVMSQGLVANNGGNDKQTIFQAWHNQFVASAWAVKIGHALDPKLQVGCMLLYATTYSYDANPVNQLATLQQNQAFNFFCGDVQVRGEYPAYTDALMADNGFKFTDLDFSAEELTLLKNHPVDYIGFSYYMSAVVETVEKEHAEVGGNLLSGIKNPFLRASEWGWQIDPIGLRIALNQLYERYRKPLFIVENGLGAVDKPDADGKIKDDYRIDYLKQHIEQMGAAIHDGVDLMGYTPWGCIDLVSASSGQMSKRYGFIYVDLDDAGQGSLNRYKKQSFNWYQRVIASNGTDLG
>NZ_CP041944.1|WP_003580474.1|2132775_2133342_+|TetR/AcrR-family-transcriptional-regulator
MDTREKLVATAASLFQKEGVRATGLTQILTVSGTPKGSLYYYFPNGKAQLIEAAITYAGQHILEHVQRDLDRYKAPDAALAGQLESMATEMQEKGHLGGNSISLIALETGDDPELQAACSAVFTQLETLYIKKLTSAGIPPDRAQPLGQFIQASIEGAIILAATKDNPDLLRQTADQLTRLIKLALAA
>NZ_CP041944.1|WP_144182155.1|2133632_2135051_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MQLSQTKEMPQARVHVAHPAMAMIGLMIGAFVGMFSETSLNIALPSLMTALNVSQGTIQWLVTGYMLVIGICMPLSSLLSKWYNTKKIILFALGAFILGSVVSAMGAVFPVVLIGRLIQGIGTGLILPLMFSVAMQIFPPYKLGTVMGMAALVIMFAPAIGPTITGLVLAKFTWHYIFWLFVPFLVLAFIFTLTSMENVYHQTQTPVDWLSIVESSIGFAGIVVGTTMASDAGWLSLEVGLALLVGVIGLVLYARRQLSLTNPMLNLRVFANKQFTVGTLLVMLDFGVILASMYLLPMYLQRVMGMPVAMTGLVMLPGGIVNAAVSAIAGRMYDSHGAKWLSRGGFVIAILGVLILLNSGAQSPLWWIILGHVVLMIGAPLAMSPAQTYGLNSLSGAESADGSALLNTLQQIVGAVSTAVATSMLALGSAKAAGETGLTIGSHFGFMFVLILAIIGLIVAFQVKKPQASRDL
>NZ_CP041944.1|WP_003580470.1|2135256_2136588_+|NAD(P)/FAD-dependent-oxidoreductase
MSEYDFDVLYLGSGHGAFDGAGPLAASGKKVGVIESDMIGGTCPNYGCNAKITLDTPVVLQRMAERMQGIVSGSITINWSELVAHKQAVIKPLPTNIGSNLKQTGVTIIHGHGKFIDPHSITVAGKTYTAENMVIATGRRPHHLDIPGTELAHDSRAFMDLKTLPKRIGILGSGYISMEFATIANAAGAEVSVFMHADKALREFHQPFVKAVMADMTKRGVKFIPSADVQALKQTAQGIAIQYGDHQEQQVDWVLDATGRIPNDDQIGLEAAGVTFSQRGIAVDDHLRTNVPNIFASGDVLDKPQPKLTPTATFESYYLFQLLSGQTTDPIDYPAIPSTVYTTPRIAKVGVTPEEAADGDYQVVRNHIPDDWYHQTDQETMGDSILIFDRDHHLVGATEFSAQAEDAINTLLPAIVFHFSKQQMWQMAHIFPSESAAAWHKIR

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Crispr_ID: NZ_CP041944_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041944_2

2480887-2481004

Orphan

Consensus_repeat	Method
GCTGGCCCAGAAACCTACACATAAGGACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041944_2

>merge|NZ_CP041944|2|2480887-2481004|CRISPRCasFinder
GCTGGCCCAGAAACCTACACATAAGGACCGCGGCCACTTTATGCTCCGGTTTCTACCCGGTCCAGCTCACGCTCCTCATAAACGCGTTTGCTGGCCCAGAAACCTACACATAAGGACC

>NZ_CP041944|2|2|2480887-2481004|CRISPRCasFinder
GCTGGCCCAGAAACCTACACATAAGGACC	GCGGCCACTTTATGCTCCGGTTTCTACCCGGTCCAGCTCACGCTCCTCATAAACGCGTTT
GCTGGCCCAGAAACCTACACATAAGGACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041944.1\|WP_003566103.1\|2485875_2486673_+\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|223422
NZ_CP041944.1\|WP_003579778.1\|2490563_2491757_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP041944.1\|WP_003579803.1\|2473822_2474959_-\|alpha-L-fucosidase	unknown	unknown	gnl\|CDD\|376461
NZ_CP041944.1\|WP_003579799.1\|2478408_2480727_+\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|213222
NZ_CP041944.1\|WP_003566828.1\|2477046_2477469_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041944.1\|WP_003566083.1\|2491759_2492587_+\|ammonia-dependent-NAD(+)-synthetase	unknown	unknown	gnl\|CDD\|234831
NZ_CP041944.1\|WP_003579810.1\|2468551_2469043_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|224830
NZ_CP041944.1\|WP_003566823.1\|2471176_2471344_+\|FeoB-associated-Cys-rich-membrane-protein	unknown	unknown	unknown
NZ_CP041944.1\|WP_003579806.1\|2471558_2473226_+\|phosphoenolpyruvate-carboxykinase-(ATP)	unknown	unknown	gnl\|CDD\|236471
NZ_CP041944.1\|WP_144182188.1\|2482730_2483558_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|163441
NZ_CP041944.1\|WP_003566825.1\|2473396_2473714_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131249
NZ_CP041944.1\|WP_003566087.1\|2489096_2490560_+\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236426
NZ_CP041944.1\|WP_003579797.1\|2481202_2482669_+\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|225646
NZ_CP041944.1\|WP_003566829.1\|2477608_2477983_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041944.1\|WP_003584880.1\|2492852_2494010_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP041944.1\|WP_003579802.1\|2475053_2476484_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340890
NZ_CP041944.1\|WP_003579780.1\|2486779_2487925_+\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|238434
NZ_CP041944.1\|WP_003566099.1\|2487949_2488651_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP041944.1\|WP_003579808.1\|2469029_2471141_+\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NZ_CP041944.1\|WP_003579793.1\|2483886_2485863_+\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423

Protein	Function_ID	Function_description	E-value
NZ_CP041944.1\|WP_003566103.1\|2485875_2486673_+\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|223422	COG0345, ProC, Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism].	8.5867e-80
NZ_CP041944.1\|WP_003579780.1\|2486779_2487925_+\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	5.10533e-157
NZ_CP041944.1\|WP_003579803.1\|2473822_2474959_-\|alpha-L-fucosidase	gnl\|CDD\|376461	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase.	1.10349e-71
NZ_CP041944.1\|WP_003579799.1\|2478408_2480727_+\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	6.12386e-103
NZ_CP041944.1\|WP_003566083.1\|2491759_2492587_+\|ammonia-dependent-NAD(+)-synthetase	gnl\|CDD\|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	0
NZ_CP041944.1\|WP_003579810.1\|2468551_2469043_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|224830	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism].	1.38673e-15
NZ_CP041944.1\|WP_003579808.1\|2469029_2471141_+\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP041944.1\|WP_003579793.1\|2483886_2485863_+\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.36803e-97
NZ_CP041944.1\|WP_003579806.1\|2471558_2473226_+\|phosphoenolpyruvate-carboxykinase-(ATP)	gnl\|CDD\|236471	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase.	6.53618e-06
NZ_CP041944.1\|WP_003566825.1\|2473396_2473714_+\|hypothetical-protein	gnl\|CDD\|131249	TIGR02194, Glutaredoxin-like_protein_NrdH, Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.	6.08924e-12
NZ_CP041944.1\|WP_003566087.1\|2489096_2490560_+\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|236426	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated.	0
NZ_CP041944.1\|WP_003579797.1\|2481202_2482669_+\|peptide-MFS-transporter	gnl\|CDD\|225646	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism].	1.05047e-153
NZ_CP041944.1\|WP_003584880.1\|2492852_2494010_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	6.08389e-45
NZ_CP041944.1\|WP_003579802.1\|2475053_2476484_-\|MFS-transporter	gnl\|CDD\|340890	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.35462e-44
NZ_CP041944.1\|WP_144182188.1\|2482730_2483558_+\|metallophosphoesterase	gnl\|CDD\|163441	TIGR03729, acc_ester, putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.	3.26951e-118
NZ_CP041944.1\|WP_003566099.1\|2487949_2488651_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	3.02871e-84
NZ_CP041944.1\|WP_003579778.1\|2490563_2491757_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	7.06447e-42

>NZ_CP041944.1|WP_003579799.1|2478408_2480727_+|ABC-transporter-ATP-binding-protein/permease
MLDLKHIKKYYQTGDYTTKALDDVSVQFREQEFVAILGPSGSGKTTLLNVIGGLDRYDSGDLLLHGRSTKNFKEADWDAYRNNSVGFIFQSYNLIMHLSILENVELGLTLSGVSAADRRKKAEAALTKVGLKAHMGKQPNQLSGGQMQRVAIARAIVSEPSILLADEPTGALDTETSEEIMRLIADLSRERLVIMVTHNPQLAHEYAERTIEFKDGKILSDSRPFKDEEKTASFDLHRTKMSYFTALKLSFTNIMTKKGRTFLTAFASSIGIIGIAVVLALSSGFQKQIDNTQAETLAQFPITISTNATSLTAGAADNTKTSTFKTTSTVVAKQSASDKAQHTNKLNQKYIDYVNGISKKLTDNIGYTYGTGMNLLRDVNGTIKSVQFSTAKPSSNQTQRGLASASSSVYPVDREGGTSYLKKNYEVVAGSYPKHDGDVILIVDRDNSTNINALKNLGFDVKDGQKVKFNQIVGTKIKAISNNAYYQNVAGNVYVPTKDYANAYKQNDNRELTVAGVLRTRSKTSDGLLSQGFAYSDRLTKDLVALNKDSDVVKAQRASDVNIFTNQSVDKATKDQLITALGGSETPTQITIYPTSFKDKDKILSYLDKFNHGKKKADQVVYTDLAGTISSMTGGIMSAITIVLVAFAGISLVTSMIMIAILTYTSVLERTKEIGVLKALGARRKDITRVFDAETIILGVSSGILGIIIAWLLTFPINAILYSMTELPNVAQLNPIHAVILILISTILTVLGGHIPARMAANKDAAIALRAD
>NZ_CP041944.1|WP_003566829.1|2477608_2477983_+|hypothetical-protein
MAVWRMMFARPQFKHRQIKRMVDDLNREGNFGGMPIHRITLTRQTRELIYVDLEFQLTTGLTQPLFEQMAKYILVAVAGLAHAPQPIYLAAMANPFAKLNISYYIYPDHSLDLIYWQPLLREPT
>NZ_CP041944.1|WP_003566828.1|2477046_2477469_+|hypothetical-protein
MHTRCQEPNYVEVVNQNLERLLVFETVFKEYVHTCKNIEKGNCYASESLDHLRLYFTKNVMKFCTFVDSVDAEAAPCNYAAFHKVLVNGLRGIRGGVLNMLQAIGTDKVDHDRFAAGLAEQQAARAEIDTAFSKILDPIF
>NZ_CP041944.1|WP_003579802.1|2475053_2476484_-|MFS-transporter
MKGYPKQYPLDRQTLFGINTMGLMSTTAYYLYTAVLMMFITDYSGIYSGVPGKAAAVATTLLFVGRLWDAVNDLWTGYLIDISPRTRWGKFKPYVLIGSLLAGILGMMLFHIPQNFSNFGKEVYLYIVYFLFMFAATIIVTVPLTSTMSADQEVRAKLISWPRITSNIVGVVFAFFMAIATYLGTKRNPNIPLTVDLIVIPFLILSLIGIVMVKEGPVTEEAKPPRLRDIGQMIKINHPFRINLYFTFVGGFVWALLTATSLYYIKYAFGVKNLGTQSMYFGLLTLITLVAGTLISQKAMQYISAIRGVQWCYLAMAPFLVIMFIINEIHVIDNPWVFYLLIGIVMTIAGAQFVPANLIIMETMDYNRLKLNAGMEATINAVNMFLQKLQSGLATIGVGAALLIVGYNAQTLEKASHVPDNLLQSLGVVLFAIPAVFSFLAYLIARHYPLQGAARDEMYAALAAKRVTNTQSSKSK
>NZ_CP041944.1|WP_003579803.1|2473822_2474959_-|alpha-L-fucosidase
MTKPSAVNIHRTNPPDWFKQADFGIIIHWGPYSVPAYAPVNIPDYGTLIKTKSLGYLFEHQPYAEWYGNSMLLPNSPVAAYHRTHYGNTSYADFAKTFKQTAQNVDVQAWAEAFANAGAKYVVIVTKHHDGFVMFDPHTKNPYEPDYHLNFDFVGELAQAVRAHGMRFGTYYSSLLDWTFPHLPIKDYGSFLLGNDKSQTYKDYVWRQWHELIDRYHPDVLWSDIGYPDDHRLETLFKYYYQQVPEGLVNDRWQQFPDWMRTSWIRPIFNLVAAQVIKRDQHHSDDLSEVKYYDYRTLEYRTDWPQTNRYFEMTRGMDKSFGYNRLSRPEDYITADDIKQLIAELGSKRGRLLLNVGPDMNGQIPSAQLSILQQLSDR
>NZ_CP041944.1|WP_003566825.1|2473396_2473714_+|hypothetical-protein
MAIHFVIYEKPNCESCRLTKRWLAEHGQHFRTTNHRGESNLVDINANDPLKRAWSHQKIVKFREAGYDRFPVVRVRDDATGDVLATWSGFRPEALASWTAINQLG
>NZ_CP041944.1|WP_003579806.1|2471558_2473226_+|phosphoenolpyruvate-carboxykinase-(ATP)
MTSKQSFSSSDITSQSGYFSALKATVETAFYGENVKQVTTIAQAYALAKTAPGVIITDLPIKHTAELGLPPDAKVLVANDGRVVGRTAAARQIIGQPDVDETKLAAIAREAVFLGSRKTFLRGDVTVGLSSDFAIKAHLMLPEAYANNLYTYLLNFQIDTPQRNAEYEQSRPLPEDDIYLYADPDWHDPAYPNGVAVFDPTHNAAIVLGLRYFGELKKGTLTLAWATAHRNGFVACHGGMKQYTRQDGDFTMAAFGLSGSGKSTITLASHGDQYPVKVLHDDAFVIDRQTGATTALEPSYFDKTQDYPLSDPGIQYFLTVQNVGVTLDAAGKKTLVTQDIRNGNGRTVKSRYVTPNRVDHLTESIDAIFWIMKDDTLPPVVKLEDPDLAAAFGVTLATKRSTAENVIGDVDRDHLVIEPFANPFRSYPLGEDYQDFHQLFEQRQTACYILNTGSYNGQNVKPADTLGAIAKIVDETAAFKPFGLLPKMRYLPLSGFNVDFGDNDYRARLRQRLEDRLAFIATKDVDHDGYDRLPIDASRALEDVIAALDQQAAAM
>NZ_CP041944.1|WP_003566823.1|2471176_2471344_+|FeoB-associated-Cys-rich-membrane-protein
MATWIIGGIVVLIIAVVAYRTFFKKNKAGCSQCEEVGCPLIDHAKMVQANNRRKA
>NZ_CP041944.1|WP_003579808.1|2469029_2471141_+|ferrous-iron-transport-protein-B
MAIRETLALVGNPNSGKTTLFNALTGAKQHIGNWPGVTVERKSGRLKADNALVIQDLPGTYSLSPYSSEEIVTRDFLLNDQPDLVLNVVDATNLERNLYLTLQVMETGRPLIVALNMMDVLVKTGHRTINLKKLSYALQVPVIATTATKPAALQELVQTIQAPLPKPYAFPEYDARLESALTMLEDVIDQKVPADRLRWYAIKVFEKDPQVVKQLAFSSDEQHQMNEILRTAEHVFDDTTDSIIVNARYDFIARVIAMCVVDKDDFVMSMSDKIDRIVTDRYLALPIFVLVMWAVYYLSIQTIGTIGSDYLNDTVFGGWLPSVVGGTLKSWAVAPWLSGLIVDGLIGGIGSVLGFLPQIMMLFLCLGILEDCGYMARIAFVMDRLFHRFNLSGKSFIPILIATGCGVPGIMATRTIESEKDRRMSIMLTTFMPCSAKLTVIALVSGTFFPSTSWVAPSAYFMGIIAVICSGIFLKKTALFAGPPAPFVMELPAYHLPRLTNLYRSVMSRARAFVQKAGTIIFLSCVLLWFLSNFNFGLQMVDENDSMLRGLGTVIAPVFAPLGFGDWHATVATLAGLIAKENCVGTLHISFGAGSASGFGQALRATYPAMAGYAFLVFNLLCAPCFAAIGTMYKEFGDARWTWRAVGYQTGVAYLLTMLIYQGSLVVSGQASVMSIGLVLVAILVIVYGLLIKRPVPAIASSY
>NZ_CP041944.1|WP_003579810.1|2468551_2469043_+|ferrous-iron-transport-protein-A
MQALIDVRESGAYLLMSVGGSGALRRHLAEMGLVVGKKVTVVQPASKLSGMVIFFQGQRLAISDEIASLLVVRPFAMDADTPAIALADLPLRQAGLIRTIKGDPPLRHRLMDMGLTKGTLVKIHQIAPLGDPIELAVRGYKLSIRKQDAAHVLVTEVTSDGDT
>NZ_CP041944.1|WP_003579797.1|2481202_2482669_+|peptide-MFS-transporter
MNNSKDRTFMGHPRGLLTLSMTEFWERFSYYGMRAILIYYMYYAVEKGGLGFDQPTALSIMSIYGSLVYLSATIGGFISDRLLGSRRTVFWGGVLIMLGHIVLSLPIGATGLFGSIVLIVLGTGLLKPNVSEMVGSLYPEDDLRRDSGFSIFVMGINFGSLIAPIFVPWMADKVNFHAGFSLAAIGMFVGLIFYVIDGRKYINPADNTAPDPLKPEDVRPLVIRVVVAIAAVGVILLAMAGFNALTIANVISLITLIAIGLPIWYFVLMIRSKKVTKTERSRVIAYIPLFLAAMIFWAIEEQGSVVLALFAAQQTKLDFGFFKILPGNFQTLNPLFILLYGPLFAWLWMKLGKRQPTSPKKFYLGLIFAGASYLWMVIPVILFGSSAKVSPLWLVMSWAIVEIGEMLISPVGLSVTTKLAPKAYSSQMMSMWFLADASAQAVNAQIVRFYTPNHEVAYFAIVGLVSVGFAVVLAFFTPRIEKLMQGVN
>NZ_CP041944.1|WP_144182188.1|2482730_2483558_+|metallophosphoesterase
MVKIAFSVDNHFDVNRVDGFEMLKKQAAYLVEHDYQIYVNAGDTYNDFTKSLAYFRALQAEVGSAVTIRFLAGNHDMVNGATYDEIQSAVDPLYLHEKILPVPGTNAVIIGNNGWYDYSLGQLGNMKTDAEYAQWKRAFWIDSAIDAPVTDAARMQRVLTTTKAALQANQTHQMIYVTHFVPIREAMVYTVDRPPWQMATALMGSAKLGDLLIGKVSAVVFGHEHFRDAPKLLSGTTYYHQPLGYGLKRLFEWQSQDWWTEWRQTLVTLTVPTLS
>NZ_CP041944.1|WP_003579793.1|2483886_2485863_+|S9-family-peptidase
MAIKATDLFKLVSLSYPSATDDGYFVQENRISEADNTYYQRICFVNHRGGTIAYGFDQKHDRHPLLSPDQQWLAFLSQASDKTTQVFVQAVNGGTAKQFSAEKEGVSYFGWQADSQALFIQTTVGAKPKKTDKQWPQPVTVSRVPYKLNGVGLLPEHVAYELRVQRLRQKTSRLVMGREHEFEVGAISPDGQTLAFTAERLPDDPNDFSQATYLLNLADQQVTMVNDQLPQAALSPEAFSADGKQLLLVGSDNHLPNVSQSHLWHYDLATKTLQDVADDIDFDIPGHVNGDFQQDLSEKVADFATADYYLTIGFDHGKTSLYAGGPDEQLTPLIGGRRHVTDYALTPDHHGVVFTESTMTVPSRLSYFDLATEEEHVIYDPNRRVTRDMGLVTPQTFNFQRDGFEIEGWYFPPQQATASHPAILYVHGGPAVGYGYTFFHEMQFLAAQGYGVICPNPRGGLGYGEAFTAAVIKHYGQGDYEDCMASVDEALKLDTTIDPDRLYVAGGSYGGFMTNWIVTHTHRFKAAVTQRSIANWLSMYGTSDIGYFFTPWELEGKWTGDLSDVKSLWDFSPLAHIDFAQTPTLVMHSENDQRCPIGQGEEFYIGLKLHGVDTKFMRFPNATHELSRSGLPNLRLARLAALVDWFKTHSATEESHQA
>NZ_CP041944.1|WP_003566103.1|2485875_2486673_+|pyrroline-5-carboxylate-reductase
MTIGFIGAGNMARAIITGLLAKNAVTPEEIVLHGGQPIHYEPYAAKIGAKAVASNQAVADTADIVFLAVAPKLGVPILKTIGPTLKQRQVPIVSMLTGVSLATLEDALGSQDQPVLRIMPNVNVAINAGMTAYAANDSVAGQLDGLLDLLNVLGKTMALPEDQFSTFVALAGSSPAFVYLFIDSLSRAGVKYGLTKKQATAIAAQAVMGSAQNVLASEQSPFDLIDQVSSPGGTTVAGLLAMEQAGLMSAVIKGVDATIAKDRQG
>NZ_CP041944.1|WP_003579780.1|2486779_2487925_+|N-acetylglucosamine-6-phosphate-deacetylase
MTVTVLKHATIYTGLERIDDGYVRFDDKILAVGDMFDYRAQSGEQTFDLQGKTLIPGFIDVHAHGGYGFDAMDGDADQIDEMATKMMTHEGVTTLFATTMTQSTENIDKAMRGVKQAAERNHIIQGVHLEGPFISKVFKGAQPEEYIKNPNVDLVKQWQELSGDLVKLITYAPEDEGSQAFEDYLLAHNIVPSVGHSNATREQMLHSKATHVTHLYNAQRGLRHREPGVTGHAMLEDNMYCELICDGFHIVPDMLRLAFDQKGPERIELVTDSMRSKGMPEGKSELGGQTVYVKDKQARLKDGTLAGSVLMYKDAFKNAMSFMDASLFDAVEMSSVNQAREFNLTSKGTLEVGKDADINVLDRNNDLVATYSYGVKHDTED
>NZ_CP041944.1|WP_003566099.1|2487949_2488651_+|GntR-family-transcriptional-regulator
MDAPVYIQIHNAIRADIEAGKWRVGDRIPSERDLAVTFKVSRMTLRQAIQTLVDEGILERRVGSGTYVANQKVQEKMSGVTSFTDLMQAQGKVPSSKTVSYHVAQPTSSEVEKLKLEPKEQVLRMERIRYADKIPISFETAAVPYNLVKNFTKKEMTASFYHTLEKKGGYVLGGAQQTVSAMLASERISEYLDIKRGEAILRLRQVSFLQDGTPFEYVRTQYVGERFEFYLER
>NZ_CP041944.1|WP_003566087.1|2489096_2490560_+|nicotinate-phosphoribosyltransferase
MTTQLGEGLTLHTDFYELNMMNTFFEQGISERNAVFEVFFRDLPFGSGFAVFAGLEHVMDYLNHLKFSEDDLAYLQSQTDYSDAFIDYLRHLKFTCTVKSALEGDLVFNNEPIWQIEGPLAQAQLVETAVLNMINYQTLVATKAARIRSVAGADPLMEFGTRRAQETAAALWGTRAAYIGGFNATSNVLAGKEFGIPISGTHAHSLVQAYGNDYDAFKAYARSNKDVVFLVDTYDTLRSGVPAAIKVANEFKGKINFLGVRIDSGDMAFISKRVRQQLDDAGYESAKIYASNDLDENTIQNLKMQGAKIDIWGVGTRLITAYDQPALGAVFKLVSIEDAAGKMRDTIKLSNNAEKVSTPGKKQVWRITRQDDGKSEGDYVALADETIDTQRSLYMFHPNFPYINKTVKNFEAKPLLQTIYDKGQQVYHTPPLQEVQAYATRSTNALWDEYRRILNPQDYPVDLSQRVWDNKMDLIKAVKSAVADREE
>NZ_CP041944.1|WP_003579778.1|2490563_2491757_+|serine-hydrolase
MRASKRRSQYRWLILSLLVGLVVGIAAYASYDHFYLKPQIEAKEERTRRKYETELNRHRAVEQRLQNETRTATSATDKLMQPVNQAEAKPFMKILEANHFSGTALMIRRGKIILNTGLGYADAESGRLNGPETLYQIGSIQKGLTAVLLMRLVEQGKVHLSDPISKYLTGIRTGKQVTLRMMLNMRSGLSLTRAQSASLSDAGIVRWSIANLNYGTVRYDYQPVNYVLLAGVIEKVTGRLYADLIQQEIFKKLKLTHSGFMPELFHESNQAFGYSGPINNPYAKRYTEPSVNYNRELGTGNIYTSAGDLYQIIKAVNQGKIISTASLKALRNLDNGQYTAGVYNFGSYTLTHGVVASQSAGTMIDTSGQNAVVLLANTDKITQGLIKNLYLNMIKGV
>NZ_CP041944.1|WP_003566083.1|2491759_2492587_+|ammonia-dependent-NAD(+)-synthetase
MRPLQAEIIKALGVQATIDPETEVRRSVDFLKAYLKKNTFLKTYVLGISGGQDSSLAGALTEKAMQEMRAETGDDAYQFIAVRLPYGEQADEADAMAAIDFMHADVVKRVNIKPSVDAMVAAVEADGSKISDFNKGNIKARMRMIAQYAIAGNNAGAVIGTDHAAEAVTGFYTKFGDGGADLTPLYRLDKRQGAALLKVLGAPAHLYEKAPTADLEDNRPALPDEVALGVKYKDIDDYLEGKDVSDQAAETIEKWYQKTAHKRHLPITVFDNFWK
>NZ_CP041944.1|WP_003584880.1|2492852_2494010_+|serine-hydrolase
MSGKHRYIWLGVMLILCAVSIGAGTYLWQQNSRSAVNTKVKSAKTVTKAVRRDRGKSKEELLAMTLDRVATTTEGQPLEQELTNDKFIGSALIIKHGKVVFNNGVGDADTTTHRRNGPTTLFQIGSIQKAVTAVALAQLAASGKLSLDDPVGKYLTGIKTGDQVTLRMMVAMRSGFSLRKYQPTVMDDANIIQWSIANLTYLPQDNYAYQAVNYVLLAGVIEKVAGRSYEQQVKNNIFDRLNLKHTGFLPAMLTDPERAITYTGPAANPYQTAIGEPAVWYNRELGTGNVYTSTGDLYRLLRGIDTGKVLPLSTLKTLRNRNDGVYNAGIYNHADFYSTNGVVAGQMASTAISHDGQNAVILLSNYNSHALNLHDLAVHLFSELG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP041944_1	1.1\|2120490\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120490-2120519	30	NZ_LS991422	Lactobacillus casei isolate CECT 9104 plasmid 2	4192-4221	2	0.933
NZ_CP041944_1	1.1\|2120490\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120490-2120519	30	NC_005893	Lactobacillus phage phiAT3, complete genome	29490-29519	2	0.933
NZ_CP041944_1	1.1\|2120490\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120490-2120519	30	AY605066	Bacteriophage phi AT3, complete sequence	29490-29519	2	0.933
NZ_CP041944_1	1.1\|2120490\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120490-2120519	30	MH983004	Lactobacillus phage BH1, complete genome	29124-29153	2	0.933
NZ_CP041944_1	1.2\|2120556\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120556-2120585	30	MT774393	CrAssphage cr127_1, complete genome	42841-42870	5	0.833
NZ_CP041944_1	1.3\|2120622\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120622-2120651	30	NZ_CP041073	Bacillus tropicus strain LM1212-W3 plasmid p10, complete sequence	4254-4283	5	0.833
NZ_CP041944_1	1.11\|2121150\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121150-2121179	30	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	6674-6703	5	0.833
NZ_CP041944_1	1.2\|2120556\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120556-2120585	30	NZ_CP039224	Piscirickettsia salmonis strain NVI 5692 plasmid unnamed5, complete sequence	31378-31407	6	0.8
NZ_CP041944_1	1.6\|2120820\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120820-2120849	30	NC_029100	Pseudoalteromonas phage Pq0, complete genome	18901-18930	6	0.8
NZ_CP041944_1	1.2\|2120556\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120556-2120585	30	JN638751	Bacillus phage G, complete genome	253284-253313	7	0.767
NZ_CP041944_1	1.7\|2120886\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120886-2120915	30	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1302250-1302279	7	0.767
NZ_CP041944_1	1.8\|2120952\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120952-2120981	30	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	104218-104247	7	0.767
NZ_CP041944_1	1.8\|2120952\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120952-2120981	30	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	105358-105387	7	0.767
NZ_CP041944_1	1.20\|2121744\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121744-2121773	30	NZ_CP010135	Escherichia coli strain D1 plasmid A, complete genome	19143-19172	7	0.767
NZ_CP041944_1	1.20\|2121744\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121744-2121773	30	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	214547-214576	7	0.767
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP016462	Blastomonas sp. RAC04 plasmid pBSY18_1, complete sequence	79182-79211	7	0.767
NZ_CP041944_1	1.22\|2121876\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121876-2121905	30	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	346559-346588	7	0.767
NZ_CP041944_1	1.27\|2122206\|30\|NZ_CP041944\|CRISPRCasFinder,CRT	2122206-2122235	30	NZ_AP018520	Sphingobium sp. YG1 plasmid pYGP1, complete sequence	189876-189905	7	0.767
NZ_CP041944_1	1.1\|2120490\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120490-2120519	30	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	785535-785564	8	0.733
NZ_CP041944_1	1.6\|2120820\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120820-2120849	30	NC_011308	Listeria phage P40, complete genome	13811-13840	8	0.733
NZ_CP041944_1	1.16\|2121480\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121480-2121509	30	NZ_CP032828	Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence	148041-148070	8	0.733
NZ_CP041944_1	1.16\|2121480\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121480-2121509	30	NZ_CP041205	Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence	533174-533203	8	0.733
NZ_CP041944_1	1.16\|2121480\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121480-2121509	30	NC_015184	Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence	399866-399895	8	0.733
NZ_CP041944_1	1.16\|2121480\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121480-2121509	30	CP047390	Agrobacterium sp. CGMCC 11546 plasmid pB	172783-172812	8	0.733
NZ_CP041944_1	1.16\|2121480\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121480-2121509	30	NZ_CP033036	Agrobacterium fabrum strain 12D13 plasmid pAt12D13a, complete sequence	283508-283537	8	0.733
NZ_CP041944_1	1.16\|2121480\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121480-2121509	30	NC_003064	Agrobacterium fabrum str. C58 plasmid At, complete sequence	450407-450436	8	0.733
NZ_CP041944_1	1.16\|2121480\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121480-2121509	30	NZ_CP032919	Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence	311399-311428	8	0.733
NZ_CP041944_1	1.16\|2121480\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121480-2121509	30	NZ_CP033029	Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence	311483-311512	8	0.733
NZ_CP041944_1	1.22\|2121876\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121876-2121905	30	NZ_CP014149	Paeniclostridium sordellii strain AM370 plasmid pRSJ16_1, complete sequence	4157-4186	8	0.733
NZ_CP041944_1	1.22\|2121876\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121876-2121905	30	NZ_CP032533	Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence	46186-46215	8	0.733
NZ_CP041944_1	1.2\|2120556\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120556-2120585	30	NZ_CP031220	Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence	125268-125297	9	0.7
NZ_CP041944_1	1.2\|2120556\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120556-2120585	30	NC_049481	Lactococcus phage CHPC361, complete genome	21399-21428	9	0.7
NZ_CP041944_1	1.6\|2120820\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120820-2120849	30	NZ_CP010956	Sphingobium sp. YBL2 plasmid 2pYBL2-2, complete sequence	77582-77611	9	0.7
NZ_CP041944_1	1.6\|2120820\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120820-2120849	30	NZ_CP018225	Tardibacter chloracetimidivorans strain JJ-A5 plasmid pHSL4, complete sequence	168729-168758	9	0.7
NZ_CP041944_1	1.6\|2120820\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120820-2120849	30	NZ_CP013265	Sphingobium baderi strain DE-13 plasmid pDE1, complete sequence	107986-108015	9	0.7
NZ_CP041944_1	1.10\|2121084\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121084-2121113	30	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1556860-1556889	9	0.7
NZ_CP041944_1	1.18\|2121612\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121612-2121641	30	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	407276-407305	9	0.7
NZ_CP041944_1	1.20\|2121744\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121744-2121773	30	MN961670	Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence	308409-308438	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	55080-55109	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	15528-15557	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	244734-244763	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	186579-186608	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP026789	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence	87826-87855	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP034059	Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence	181875-181904	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP024476	Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence	212087-212116	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_LR213456	Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2	87047-87076	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP026771	Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence	60107-60136	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP044157	Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence	215777-215806	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP026837	Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence	139761-139790	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NC_017319	Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence	73057-73086	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP012142	Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence	73059-73088	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP044154	Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence	10672-10701	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	51375-51404	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP037924	Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence	18843-18872	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP026800	Shigella flexneri strain NCTC 9728 plasmid unnamed, complete sequence	16783-16812	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NC_002698	Shigella flexneri 5a virulence plasmid pWR501, complete sequence	70426-70455	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	51763-51792	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP020087	Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence	171006-171035	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP020337	Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence	37214-37243	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NC_019197	Shigella flexneri plasmid pSF5, complete sequence	99920-99949	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP045942	Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence	91633-91662	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NC_004851	Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence	74402-74431	9	0.7
NZ_CP041944_1	1.21\|2121810\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2121810-2121839	30	NZ_CP026830	Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence	28338-28367	9	0.7
NZ_CP041944_1	1.24\|2122008\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2122008-2122037	30	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	407276-407305	9	0.7
NZ_CP041944_1	1.2\|2120556\|30\|NZ_CP041944\|PILER-CR,CRISPRCasFinder,CRT	2120556-2120585	30	MF448569	Lactococcus phage 88605, complete genome	22649-22678	10	0.667

1. spacer 1.1|2120490|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LS991422 (Lactobacillus casei isolate CECT 9104 plasmid 2) position: , mismatch: 2, identity: 0.933

caacagctttcccgcagattcagcatcgct	CRISPR spacer
caacagctttcccacagattcagcatcgtt	Protospacer
*************.**************.*

2. spacer 1.1|2120490|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NC_005893 (Lactobacillus phage phiAT3, complete genome) position: , mismatch: 2, identity: 0.933

caacagctttcccgcagattcagcatcgct	CRISPR spacer
caacagcttttccgcagattcagcatcgtt	Protospacer
**********.*****************.*

3. spacer 1.1|2120490|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to AY605066 (Bacteriophage phi AT3, complete sequence) position: , mismatch: 2, identity: 0.933

caacagctttcccgcagattcagcatcgct	CRISPR spacer
caacagcttttccgcagattcagcatcgtt	Protospacer
**********.*****************.*

4. spacer 1.1|2120490|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to MH983004 (Lactobacillus phage BH1, complete genome) position: , mismatch: 2, identity: 0.933

caacagctttcccgcagattcagcatcgct	CRISPR spacer
caacagctttcccacagattcagcatcgtt	Protospacer
*************.**************.*

5. spacer 1.2|2120556|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to MT774393 (CrAssphage cr127_1, complete genome) position: , mismatch: 5, identity: 0.833

cttcatctaatgatgaattaactaacaagt	CRISPR spacer
atgcatctgatgatgaattaactaaaaatt	Protospacer
 * *****.**************** ** *

6. spacer 1.3|2120622|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041073 (Bacillus tropicus strain LM1212-W3 plasmid p10, complete sequence) position: , mismatch: 5, identity: 0.833

gcaatttaatttataacccaagtt-tatcac	CRISPR spacer
gcaattaaatttataaccccagttccaaca-	Protospacer
****** ************ **** .* **

7. spacer 1.11|2121150|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 5, identity: 0.833

tcaatataactcgcatcataatcaa--gatta	CRISPR spacer
taaatataacttgcatcgtaatcaaacgat--	Protospacer
* *********.*****.*******  ***

8. spacer 1.2|2120556|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039224 (Piscirickettsia salmonis strain NVI 5692 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.8

cttcatctaatgatgaattaactaacaagt	CRISPR spacer
atttatcaaatgatgaattaactagctaat	Protospacer
 **.*** ****************.* *.*

9. spacer 1.6|2120820|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NC_029100 (Pseudoalteromonas phage Pq0, complete genome) position: , mismatch: 6, identity: 0.8

ttcgttgatgagatgatcgagcataaacaa	CRISPR spacer
atcactgatgagatgatcgaggataaaaac	Protospacer
 **..**************** ***** *

10. spacer 1.2|2120556|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 7, identity: 0.767

cttcatctaatgatgaattaactaacaagt	CRISPR spacer
agtattctactgatgaattaactaacactt	Protospacer
  *  **** *****************  *

11. spacer 1.7|2120886|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

caatgccgggggtccaaccatagcctgtgt	CRISPR spacer
gaatgccgggcgtccaagcatagccctttg	Protospacer
 ********* ****** *******. *

12. spacer 1.8|2120952|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 7, identity: 0.767

catcgtaccctcacaaaagctaacgccggc	CRISPR spacer
cttggtaccctcacaaaagctaccgacacg	Protospacer
* * ****************** ** *.

13. spacer 1.8|2120952|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 7, identity: 0.767

catcgtaccctcacaaaagctaacgccggc	CRISPR spacer
cttggtaccctcacaaaagctaccgacacg	Protospacer
* * ****************** ** *.

14. spacer 1.20|2121744|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010135 (Escherichia coli strain D1 plasmid A, complete genome) position: , mismatch: 7, identity: 0.767

cgcctgaacattgcatcgatggtttgatca	CRISPR spacer
gtgtcgaacatttcatcgacggtttgatca	Protospacer
   ..******* ******.**********

15. spacer 1.20|2121744|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 7, identity: 0.767

cgcctgaacattgcatcgatggtttgatca	CRISPR spacer
gtgtcgaacatttcatcgacggtttgatca	Protospacer
   ..******* ******.**********

16. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016462 (Blastomonas sp. RAC04 plasmid pBSY18_1, complete sequence) position: , mismatch: 7, identity: 0.767

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
gttggtggcagcgatgcatggctgatcatt	Protospacer
*************** *** *****.  ..

17. spacer 1.22|2121876|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 7, identity: 0.767

aaagcgttcgctttgatatatcaaaattag	CRISPR spacer
caagcgttcgctttgatattccaaataaat	Protospacer
 ****************** .****   *

18. spacer 1.27|2122206|30|NZ_CP041944|CRISPRCasFinder,CRT matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 7, identity: 0.767

aggaaattcgagttcttcccgcaattgatg	CRISPR spacer
tcaaaattcgagttcgtcccgcaagaaatg	Protospacer
  .************ ********  .***

19. spacer 1.1|2120490|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 8, identity: 0.733

caacagctttcccgcagattcagcatcgct	CRISPR spacer
cttgcgctttcccgcagatacggcatcgag	Protospacer
*    ************** *.******

20. spacer 1.6|2120820|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NC_011308 (Listeria phage P40, complete genome) position: , mismatch: 8, identity: 0.733

ttcgttgatgagatgatcgagcataaacaa	CRISPR spacer
accgttgatgaaataatcgagcatatttac	Protospacer
 .*********.**.**********  .*

21. spacer 1.16|2121480|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032828 (Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
gcctcggcaacggttataccgtgcccaaca	Protospacer
 .. ** ***************** *** .

22. spacer 1.16|2121480|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041205 (Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

23. spacer 1.16|2121480|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NC_015184 (Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

24. spacer 1.16|2121480|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to CP047390 (Agrobacterium sp. CGMCC 11546 plasmid pB) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

25. spacer 1.16|2121480|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033036 (Agrobacterium fabrum strain 12D13 plasmid pAt12D13a, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

26. spacer 1.16|2121480|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NC_003064 (Agrobacterium fabrum str. C58 plasmid At, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

27. spacer 1.16|2121480|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032919 (Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

28. spacer 1.16|2121480|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033029 (Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

29. spacer 1.22|2121876|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014149 (Paeniclostridium sordellii strain AM370 plasmid pRSJ16_1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagcgttcgctttgatatatcaaaattag	CRISPR spacer
tttccttttgctttgatatatcagaattaa	Protospacer
    * **.**************.*****.

30. spacer 1.22|2121876|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032533 (Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence) position: , mismatch: 8, identity: 0.733

aaagcgttcgctttgatatatcaaaattag	CRISPR spacer
atagcattcgctttgaaatatcaaatcctt	Protospacer
* ***.********** ******** ..

31. spacer 1.2|2120556|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031220 (Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence) position: , mismatch: 9, identity: 0.7

cttcatctaatgatgaattaactaacaagt	CRISPR spacer
aactatctaataatgaattaactaatgaag	Protospacer
  ..*******.*************..*.

32. spacer 1.2|2120556|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NC_049481 (Lactococcus phage CHPC361, complete genome) position: , mismatch: 9, identity: 0.7

cttcatctaatgatgaattaactaacaagt	CRISPR spacer
cttcatctaatgatgaatcatcttctttta	Protospacer
******************.* **  .

33. spacer 1.6|2120820|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010956 (Sphingobium sp. YBL2 plasmid 2pYBL2-2, complete sequence) position: , mismatch: 9, identity: 0.7

ttcgttgatgagatgatcgagcataaacaa	CRISPR spacer
ctcattgatgcgatgatcgagcatccgatc	Protospacer
.**.****** *************  .

34. spacer 1.6|2120820|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018225 (Tardibacter chloracetimidivorans strain JJ-A5 plasmid pHSL4, complete sequence) position: , mismatch: 9, identity: 0.7

ttcgttgatgagatgatcgagcataaacaa	CRISPR spacer
ctcattgatgcgatgatcgagcatccgatc	Protospacer
.**.****** *************  .

35. spacer 1.6|2120820|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013265 (Sphingobium baderi strain DE-13 plasmid pDE1, complete sequence) position: , mismatch: 9, identity: 0.7

ttcgttgatgagatgatcgagcataaacaa	CRISPR spacer
ctcattgatgcgatgatcgagcatccgatc	Protospacer
.**.****** *************  .

36. spacer 1.10|2121084|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 9, identity: 0.7

tcttcaaggtcttgtgtggcaatagcgttt	CRISPR spacer
agctcaaggtcttgtctggcaatacggcgg	Protospacer
  .************ ********  *.

37. spacer 1.18|2121612|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 9, identity: 0.7

aaaggcttacgttcaggcgattgaatccgg	CRISPR spacer
ttgggcttgcgttcaggcggttgaatttcc	Protospacer
  .*****.**********.******..

38. spacer 1.20|2121744|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to MN961670 (Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence) position: , mismatch: 9, identity: 0.7

cgcctgaacattgcatcgatggtttgatca	CRISPR spacer
atggtgaacattgcttcgatggtttctcaa	Protospacer
    ********** **********  . *

39. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

40. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

41. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

42. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033511 (Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

43. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026789 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

44. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034059 (Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

45. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024476 (Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

46. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR213456 (Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

47. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026771 (Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

48. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044157 (Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

49. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026837 (Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

50. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NC_017319 (Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

51. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012142 (Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

52. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044154 (Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

53. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034933 (Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

54. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037924 (Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

55. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026800 (Shigella flexneri strain NCTC 9728 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

56. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NC_002698 (Shigella flexneri 5a virulence plasmid pWR501, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

57. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030773 (Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

58. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020087 (Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

59. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020337 (Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

60. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NC_019197 (Shigella flexneri plasmid pSF5, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

61. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045942 (Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

62. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NC_004851 (Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

63. spacer 1.21|2121810|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026830 (Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

64. spacer 1.24|2122008|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 9, identity: 0.7

aaaggcttacgttcaggcgattgaatccgg	CRISPR spacer
ttgggcttgcgttcaggcggttgaatttcc	Protospacer
  .*****.**********.******..

65. spacer 1.2|2120556|30|NZ_CP041944|PILER-CR,CRISPRCasFinder,CRT matches to MF448569 (Lactococcus phage 88605, complete genome) position: , mismatch: 10, identity: 0.667

cttcatctaatgatgaattaactaacaagt	CRISPR spacer
tctcatctaatgatgaattatcttctgttg	Protospacer
..****************** **  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

170120 : 197422

Bacillus_phage(20.0%)

portal,tail,head,tRNA,terminase,capsid

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003578560.1\|170120_171551_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_003569751.1\|171552_173007_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_003564470.1\|173010_173307_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_003569748.1\|173358_174510_-	CamS family sex pheromone protein	NA	NA	NA	NA
WP_003569746.1\|174519_176544_-	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	2.7e-103	36.9
WP_003569744.1\|176600_178856_-	DNA helicase PcrA	A7KV33	Bacillus_phage	3.5e-136	41.3
WP_003564461.1\|179321_179642_+	DUF898 family protein	S5MNN8	Brevibacillus_phage	2.4e-14	71.4
WP_003569742.1\|179673_180465_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_003569740.1\|180468_181665_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_003564455.1\|181800_181977_+	hypothetical protein	NA	NA	NA	NA
WP_003590324.1\|182111_183419_+	Y-family DNA polymerase	Q6DMX4	Streptococcus_phage	1.2e-83	38.5
WP_003574405.1\|183411_183732_+	hypothetical protein	NA	NA	NA	NA
WP_003564448.1\|183812_184316_-	hypothetical protein	NA	NA	NA	NA
WP_003564445.1\|184340_184775_-	ACT domain-containing protein	NA	NA	NA	NA
WP_003564443.1\|185223_185433_+	hypothetical protein	NA	NA	NA	NA
WP_003569732.1\|185494_186028_-	N-acetyltransferase	NA	NA	NA	NA
WP_003564439.1\|186296_187772_-	sensor histidine kinase	A0A1X9VNV7	Mimivirus	4.2e-05	24.5
WP_003564436.1\|187768_188497_-	response regulator transcription factor	W8CYM9	Bacillus_phage	5.1e-36	35.7
WP_003569728.1\|188512_188908_-	SdpI family protein	NA	NA	NA	NA
WP_060611747.1\|189613_189982_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_003568375.1\|190093_190342_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_003568371.1\|190357_190498_+	hypothetical protein	NA	NA	NA	NA
WP_003574397.1\|190979_191273_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_060611785.1\|191328_192873_-\|capsid	phage major capsid protein	B8R651	Lactobacillus_phage	8.8e-38	25.7
WP_060611787.1\|192859_194041_-\|portal	phage portal protein	A0A2H4JB06	uncultured_Caudovirales_phage	4.3e-61	35.8
WP_003574365.1\|194045_194225_-	hypothetical protein	NA	NA	NA	NA
WP_144182039.1\|194190_195894_-\|terminase	terminase large subunit	A0A2H4JBN3	uncultured_Caudovirales_phage	8.6e-119	42.5
WP_144182040.1\|195890_196361_-\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_060611789.1\|196477_196900_-	HNH endonuclease	A0A1J0MFT4	Staphylococcus_phage	4.9e-23	46.2
WP_003574357.1\|196896_197082_-	hypothetical protein	NA	NA	NA	NA
WP_016380373.1\|197086_197422_-\|head	phage head closure protein	NA	NA	NA	NA

DBSCAN-SWA_2

643871 : 721013

Staphylococcus_phage(36.36%)

integrase,transposase

attL 688495:688510|attR 725872:725887

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003574021.1\|643871_644792_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_060417290.1\|644842_646168_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003567800.1\|646173_647133_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.8e-28	32.9
WP_123020086.1\|647132_648665_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_101511947.1\|648939_649724_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_003581973.1\|652086_653409_+	MFS transporter	NA	NA	NA	NA
WP_003581971.1\|653516_654287_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_016368446.1\|654283_654934_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	4.3e-18	33.8
WP_003581966.1\|654894_655158_-	hypothetical protein	NA	NA	NA	NA
WP_016386656.1\|655711_656395_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.8e-59	51.3
WP_003581839.1\|656486_657158_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_016366710.1\|657162_658410_-	ABC transporter permease	NA	NA	NA	NA
WP_003581836.1\|658387_659131_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-27	33.5
WP_080487858.1\|659828_660616_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_003582117.1\|662179_662776_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	5.1e-26	36.5
WP_003582114.1\|662898_663222_+	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	5.2e-17	42.7
WP_016368213.1\|663273_665004_+	arsenical pump-driving ATPase	NA	NA	NA	NA
WP_003582109.1\|665046_666342_+	arsenic transporter	A0A2H4PQU3	Staphylococcus_phage	2.0e-144	61.9
WP_003582108.1\|666378_666714_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_004563097.1\|666736_667153_+	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	3.9e-33	56.9
WP_016386656.1\|668123_668807_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.8e-59	51.3
WP_003582346.1\|669676_669853_-	hypothetical protein	NA	NA	NA	NA
WP_003582348.1\|669980_670409_-	hypothetical protein	NA	NA	NA	NA
WP_003582350.1\|670677_671946_-	NADPH-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	2.2e-50	48.2
WP_003582352.1\|671956_672565_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	1.4e-50	52.8
WP_003582354.1\|672711_673629_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_052915964.1\|673940_674783_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	4.3e-156	98.9
WP_016374491.1\|674962_675088_-\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	1.4e-15	92.7
WP_016374492.1\|675351_675912_-	hypothetical protein	NA	NA	NA	NA
WP_052915964.1\|676139_676982_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	4.3e-156	98.9
WP_108315962.1\|677035_677314_-\|transposase	transposase	Q6J1X3	Lactobacillus_phage	3.9e-29	94.3
WP_003582565.1\|677527_677995_+	DNA starvation/stationary phase protection protein	A0A222Z0F3	Streptomyces_phage	1.6e-06	29.2
WP_003582569.1\|678289_678640_+	hypothetical protein	NA	NA	NA	NA
WP_003582572.1\|678934_679303_+	YxeA family protein	NA	NA	NA	NA
WP_016382315.1\|680156_680585_-	PTS,N-acetylglucosamine/galactosamine EIIA component	NA	NA	NA	NA
WP_003586172.1\|680586_681399_-	PTS N-acetylgalactosamine transporter subunit IID	NA	NA	NA	NA
WP_003586170.1\|681388_682198_-	PTS N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
WP_144182064.1\|682198_682681_-	PTS N-acetylgalactosamine transporter subunit IIB	NA	NA	NA	NA
WP_003586165.1\|682694_683405_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003586163.1\|684021_684885_-	glucose uptake protein	NA	NA	NA	NA
WP_032787044.1\|685005_687600_-	glycosyl hydrolase family 38	NA	NA	NA	NA
WP_003586160.1\|687602_688730_-	PTS fructose transporter subunit IIC	NA	NA	NA	NA
688495:688510	attL	NA	NA	NA	NA
WP_003586158.1\|688743_689064_-	PTS fructose IIB component	NA	NA	NA	NA
WP_003586156.1\|689077_689515_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_144182065.1\|689514_691449_-	PRD domain-containing protein	NA	NA	NA	NA
WP_144182066.1\|693350_693911_+	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA
WP_003568823.1\|694035_695112_+	dihydrodipicolinate reductase	NA	NA	NA	NA
WP_172618947.1\|696432_696585_-	hypothetical protein	NA	NA	NA	NA
WP_060611715.1\|696604_696892_-	hypothetical protein	NA	NA	NA	NA
WP_002816607.1\|697212_697896_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	2.1e-60	51.8
WP_144182067.1\|697960_698704_-	TSUP family transporter	NA	NA	NA	NA
WP_082137210.1\|698922_699381_+	DUF536 domain-containing protein	NA	NA	NA	NA
WP_144182068.1\|700317_701607_-	hypothetical protein	NA	NA	NA	NA
WP_041161882.1\|701622_702480_-	DNA adenine methylase	A0A1S5PRR3	Streptococcus_phage	3.0e-80	52.0
WP_144182069.1\|702634_703216_-	recombinase family protein	M4QQC6	Vibrio_phage	1.7e-18	42.3
WP_144182070.1\|703301_703490_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_003572070.1\|703591_704308_-	nitroreductase family protein	NA	NA	NA	NA
WP_144182071.1\|704559_705621_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.5e-41	34.8
WP_076653767.1\|706985_707591_-	response regulator transcription factor	NA	NA	NA	NA
WP_144182210.1\|707593_708640_-	sensor histidine kinase	NA	NA	NA	NA
WP_033572689.1\|710075_711056_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_144182072.1\|711425_713378_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_076653772.1\|713509_714364_+	ROK family protein	NA	NA	NA	NA
WP_076652435.1\|715698_716052_-	HNH endonuclease	NA	NA	NA	NA
WP_121494528.1\|717389_718073_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	8.1e-60	52.4
WP_019899267.1\|718400_718799_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_019899265.1\|718819_719077_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_010490992.1\|719426_719699_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_144182073.1\|719750_721013_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
725872:725887	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1663088 : 1773497

105

Streptococcus_phage(30.77%)

integrase,transposase,tRNA

attL 1656945:1656958|attR 1691419:1691432

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1656945:1656958	attL	NA	NA	NA	NA
WP_003577897.1\|1663088_1664258_-\|integrase	site-specific integrase	Q6J1W6	Lactobacillus_phage	4.3e-218	97.9
WP_003573997.1\|1664370_1664631_-	hypothetical protein	B4XYT0	Lactobacillus_phage	2.5e-09	40.7
WP_016368286.1\|1664720_1665341_+	hypothetical protein	NA	NA	NA	NA
WP_003572177.1\|1665324_1665561_-	hypothetical protein	NA	NA	NA	NA
WP_003572180.1\|1665753_1666461_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_003572182.1\|1667673_1668096_-	ImmA/IrrE family metallo-endopeptidase	A0A0P0IJN5	Lactobacillus_phage	7.8e-21	39.1
WP_003572184.1\|1668088_1668442_-	helix-turn-helix transcriptional regulator	A0A141E1M3	Streptococcus_phage	7.7e-14	40.9
WP_003574003.1\|1668685_1668934_+	hypothetical protein	A0A0P0ID24	Lactobacillus_phage	2.7e-37	97.5
WP_003572187.1\|1668975_1669176_+	hypothetical protein	NA	NA	NA	NA
WP_003572188.1\|1669146_1669980_-	TIGR02391 family protein	A0A1S5SBU1	Streptococcus_phage	2.8e-46	37.8
WP_016368112.1\|1670040_1670799_+	ORF6C domain-containing protein	A0A1B0YEA7	Lactobacillus_phage	7.1e-41	48.9
WP_003572196.1\|1670971_1671223_-	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_003572199.1\|1671288_1671645_+	DUF771 domain-containing protein	U5U4L9	Lactobacillus_phage	2.0e-62	98.3
WP_003572201.1\|1671729_1671933_+	hypothetical protein	NA	NA	NA	NA
WP_003586921.1\|1671915_1672461_-	hypothetical protein	NA	NA	NA	NA
WP_003661649.1\|1672641_1672956_+	hypothetical protein	NA	NA	NA	NA
WP_003589923.1\|1672948_1673695_+	DnaD domain protein	A0A0N7IRA7	Lactobacillus_phage	5.8e-35	56.1
WP_003589925.1\|1673709_1674534_+	ATP-binding protein	A0A0P0I3L9	Lactobacillus_phage	6.6e-117	75.1
WP_003574016.1\|1674533_1675052_+	exonuclease domain-containing protein	NA	NA	NA	NA
WP_003597560.1\|1675098_1675521_+	hypothetical protein	NA	NA	NA	NA
WP_016368116.1\|1675522_1676260_+	hypothetical protein	A0A097BY87	Enterococcus_phage	3.8e-47	43.6
WP_010493149.1\|1676271_1676559_+	hypothetical protein	Q8LTA8	Lactobacillus_phage	1.6e-38	76.8
WP_032786488.1\|1677674_1678007_+	hypothetical protein	NA	NA	NA	NA
WP_010493154.1\|1678521_1678965_+	autolysin regulatory protein arpU	A0A0P0IZI6	Lactobacillus_phage	1.2e-77	97.3
WP_003583407.1\|1681436_1682435_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-54	39.5
WP_003573729.1\|1682630_1682849_-	CsbD family protein	NA	NA	NA	NA
WP_010493173.1\|1684381_1684717_+	ribonucleoside-diphosphate reductase	A0A0N7IRA2	Lactobacillus_phage	6.8e-52	90.6
WP_076626284.1\|1684836_1685169_+\|transposase	transposase	NA	NA	NA	NA
WP_016370120.1\|1685198_1685927_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	7.6e-32	40.1
WP_074392996.1\|1686811_1687141_-\|transposase	transposase	NA	NA	NA	NA
WP_016383623.1\|1687378_1689046_+	alpha-glucosidase	NA	NA	NA	NA
WP_003569637.1\|1689048_1690788_+	alpha-glycosidase	NA	NA	NA	NA
WP_144182118.1\|1690906_1693165_+	glycoside hydrolase family 65 protein	NA	NA	NA	NA
1691419:1691432	attR	NA	NA	NA	NA
WP_003569641.1\|1693157_1693838_+	beta-phosphoglucomutase	NA	NA	NA	NA
WP_003569644.1\|1693830_1694958_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.3e-19	31.3
WP_016383624.1\|1694970_1696578_+	alpha-glucosidase	NA	NA	NA	NA
WP_003569646.1\|1696669_1697902_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_003569648.1\|1697955_1699314_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_003569650.1\|1699316_1700174_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_003569652.1\|1700357_1701314_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_016383626.1\|1701895_1702180_-	hypothetical protein	NA	NA	NA	NA
WP_003586220.1\|1702185_1702836_-	recombinase family protein	M9Q1K0	Clostridium_phage	1.5e-18	37.6
WP_013245909.1\|1703177_1704098_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.6e-21	34.5
WP_144182119.1\|1704223_1706926_+	family 15 glucoamylase	NA	NA	NA	NA
WP_144182120.1\|1707005_1707689_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.1e-59	51.3
WP_172618956.1\|1707957_1709286_+	MFS transporter	NA	NA	NA	NA
WP_144182122.1\|1709463_1710250_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_076653364.1\|1710381_1710606_+	hypothetical protein	NA	NA	NA	NA
WP_020751459.1\|1710696_1713642_-	ABC transporter permease	NA	NA	NA	NA
WP_003662080.1\|1713649_1714219_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_172618957.1\|1715813_1715975_+\|transposase	transposase	NA	NA	NA	NA
WP_013727997.1\|1716265_1717174_-	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_144182123.1\|1717598_1718141_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_016387451.1\|1718098_1718227_-\|transposase	transposase	NA	NA	NA	NA
WP_003603298.1\|1719464_1721144_+	D-lactate dehydrogenase	NA	NA	NA	NA
WP_019900914.1\|1721235_1721619_-	PaaI family thioesterase	NA	NA	NA	NA
WP_016376169.1\|1721653_1722475_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_144182124.1\|1722484_1723909_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.3e-69	32.7
WP_144182125.1\|1723955_1725149_+	MFS transporter	NA	NA	NA	NA
WP_144182126.1\|1725633_1727058_+\|transposase	IS5-like element ISLrh3 family transposase	NA	NA	NA	NA
WP_144182127.1\|1728444_1729374_-\|transposase	IS30 family transposase	H7BW61	unidentified_phage	5.0e-20	29.9
WP_144182213.1\|1729637_1730135_+	hypothetical protein	A0A0A8WJ94	Clostridium_phage	1.7e-14	48.5
WP_016366579.1\|1730211_1730733_+	hypothetical protein	NA	NA	NA	NA
WP_128538125.1\|1730892_1731891_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	3.3e-54	39.2
WP_076652525.1\|1732062_1732986_-	conjugal transfer protein	NA	NA	NA	NA
WP_144182128.1\|1732982_1733516_-	hypothetical protein	NA	NA	NA	NA
WP_144182129.1\|1733525_1734521_-	lysozyme family protein	A0A1S5SEZ8	Streptococcus_phage	4.4e-107	59.1
WP_144182130.1\|1734517_1736611_-	conjugal transfer protein	A0A1S5SF30	Streptococcus_phage	2.7e-146	52.3
WP_016387580.1\|1736597_1739063_-	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	64.7
WP_010491186.1\|1739046_1739439_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	6.5e-46	73.6
WP_144182131.1\|1739500_1739998_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.0e-35	45.2
WP_003606383.1\|1740001_1740223_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	1.7e-27	83.6
WP_144182132.1\|1740378_1741056_-	site-specific DNA-methyltransferase	A0A2K8IKC3	Lactococcus_phage	1.1e-64	54.9
WP_010491196.1\|1741186_1741513_-	hypothetical protein	NA	NA	NA	NA
WP_076652513.1\|1741502_1742693_-	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	7.9e-95	43.7
WP_144182133.1\|1743008_1743269_-	hypothetical protein	NA	NA	NA	NA
WP_019898231.1\|1743265_1743541_-	hypothetical protein	NA	NA	NA	NA
WP_144182134.1\|1743551_1744919_-	DUF87 domain-containing protein	A0A1S5SFB5	Streptococcus_phage	3.1e-151	61.3
WP_016376177.1\|1744915_1745203_-	hypothetical protein	NA	NA	NA	NA
WP_144182135.1\|1745222_1745471_-	hypothetical protein	NA	NA	NA	NA
WP_010491209.1\|1745505_1745745_-	hypothetical protein	NA	NA	NA	NA
WP_016387575.1\|1745755_1746019_-	hypothetical protein	NA	NA	NA	NA
WP_144182136.1\|1746096_1746468_-	DUF961 family protein	A0A1S5SF96	Streptococcus_phage	8.3e-27	51.2
WP_016376174.1\|1746485_1746809_-	YdcP family protein	A0A1S5SF38	Streptococcus_phage	1.2e-16	42.3
WP_019898235.1\|1746850_1747093_-	hypothetical protein	NA	NA	NA	NA
WP_003567685.1\|1751592_1752021_-	hypothetical protein	NA	NA	NA	NA
WP_052916118.1\|1752120_1752798_+	hypothetical protein	NA	NA	NA	NA
WP_016381902.1\|1752794_1753442_-	hypothetical protein	NA	NA	NA	NA
WP_013246092.1\|1753558_1753756_+	hypothetical protein	NA	NA	NA	NA
WP_003581098.1\|1753821_1754586_+	hypothetical protein	NA	NA	NA	NA
WP_144182137.1\|1754646_1756035_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_016380391.1\|1756065_1756209_+	hypothetical protein	NA	NA	NA	NA
WP_003567670.1\|1756334_1757843_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.1e-72	39.3
WP_003567669.1\|1758011_1758386_+	holo-ACP synthase	NA	NA	NA	NA
WP_003581082.1\|1758372_1759509_+	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	1.0e-35	31.8
WP_003567665.1\|1759576_1759825_+	antitoxin	NA	NA	NA	NA
WP_003567661.1\|1759844_1760228_+	type II toxin-antitoxin system PemK/MazF family toxin	A0A2K9V2U7	Faecalibacterium_phage	1.2e-09	36.1
WP_003567657.1\|1760411_1760933_+	QueT transporter family protein	E7DN70	Pneumococcus_phage	4.6e-07	32.3
WP_003581075.1\|1761206_1765664_+	glutamate synthase large subunit	NA	NA	NA	NA
WP_003567654.1\|1765799_1767233_+	glutamate synthase subunit beta	NA	NA	NA	NA
WP_003567652.1\|1767361_1768066_-	L,D-transpeptidase	NA	NA	NA	NA
WP_003567650.1\|1768341_1769007_-	CBS domain-containing protein	NA	NA	NA	NA
WP_003571470.1\|1769508_1770879_-	peptidoglycan binding domain-containing protein	NA	NA	NA	NA
WP_003567646.1\|1771289_1772270_-	L-lactate dehydrogenase	NA	NA	NA	NA
WP_003567642.1\|1772939_1773497_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA

DBSCAN-SWA_4

1909805 : 1919764

unidentified_phage(66.67%)

protease,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003574021.1\|1909805_1910726_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_144182143.1\|1911066_1912020_+	aldo/keto reductase	A0A1V0SDE7	Indivirus	3.7e-10	24.6
WP_003567376.1\|1912291_1912525_+	hypothetical protein	NA	NA	NA	NA
WP_003567374.1\|1912521_1912737_+	hypothetical protein	NA	NA	NA	NA
WP_003659595.1\|1912872_1913181_+	hypothetical protein	NA	NA	NA	NA
WP_003580888.1\|1913451_1914048_+	sugar O-acetyltransferase	NA	NA	NA	NA
WP_003580886.1\|1914166_1914502_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003576306.1\|1914820_1915012_+	hypothetical protein	NA	NA	NA	NA
WP_003580874.1\|1915263_1915596_+	hypothetical protein	NA	NA	NA	NA
WP_003580872.1\|1916153_1916966_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003567359.1\|1917766_1917991_-	hypothetical protein	NA	NA	NA	NA
WP_003574021.1\|1918134_1919055_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_003567358.1\|1919367_1919556_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_032675994.1\|1919590_1919764_+\|bacteriocin	bacteriocin	NA	NA	NA	NA

DBSCAN-SWA_5

1926473 : 1977555

Bacillus_phage(20.0%)

bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003585563.1\|1926473_1927853_+\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_003567340.1\|1928026_1928377_+	hypothetical protein	NA	NA	NA	NA
WP_003580849.1\|1928449_1928761_+	hypothetical protein	NA	NA	NA	NA
WP_003567335.1\|1929066_1930422_+	threonine/serine exporter family protein	NA	NA	NA	NA
WP_003580847.1\|1930523_1930820_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_144182144.1\|1931012_1931297_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003567328.1\|1931320_1931599_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003580842.1\|1931643_1932432_-	hypothetical protein	NA	NA	NA	NA
WP_003580841.1\|1932484_1933273_-	hypothetical protein	NA	NA	NA	NA
WP_003567322.1\|1933269_1933599_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_003580838.1\|1933734_1934382_-	helix-turn-helix transcriptional regulator	A0A0S2MVM8	Bacillus_phage	1.7e-06	37.5
WP_003585559.1\|1934652_1935708_-	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_003580834.1\|1935916_1937113_+	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_003580832.1\|1937207_1937765_+	hypothetical protein	NA	NA	NA	NA
WP_003585557.1\|1938042_1941048_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_003580827.1\|1941049_1942372_+	hypothetical protein	NA	NA	NA	NA
WP_003580826.1\|1942368_1943928_+	SpaH/EbpB family LPXTG-anchored major pilin	NA	NA	NA	NA
WP_003580824.1\|1943934_1944762_+	class C sortase	NA	NA	NA	NA
WP_003580823.1\|1945350_1946574_+	hypothetical protein	NA	NA	NA	NA
WP_003580821.1\|1946762_1947299_+	hypothetical protein	NA	NA	NA	NA
WP_003567298.1\|1947552_1947747_+	hypothetical protein	NA	NA	NA	NA
WP_003585549.1\|1948063_1948897_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	5.6e-47	42.4
WP_003580815.1\|1948985_1950242_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	6.2e-106	54.0
WP_003567292.1\|1950320_1951553_-	MFS transporter	NA	NA	NA	NA
WP_003567290.1\|1951880_1952132_+	hypothetical protein	NA	NA	NA	NA
WP_003567288.1\|1952356_1952563_+	hypothetical protein	NA	NA	NA	NA
WP_003567286.1\|1952633_1952891_+	hypothetical protein	NA	NA	NA	NA
WP_003567284.1\|1953022_1953229_+	CsbD family protein	NA	NA	NA	NA
WP_003585543.1\|1953416_1954532_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_003567280.1\|1954722_1955007_-	chromosome partitioning protein ParB	NA	NA	NA	NA
WP_003580809.1\|1955020_1956142_-	low temperature requirement protein A	NA	NA	NA	NA
WP_003576240.1\|1956654_1957326_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_003576237.1\|1957825_1958449_+	CBS domain-containing protein	NA	NA	NA	NA
WP_016381637.1\|1958610_1961241_+	pyruvate, phosphate dikinase	H8YJB7	Vibrio_phage	8.4e-89	40.0
WP_003567271.1\|1961398_1963453_-	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	9.5e-64	33.3
WP_144182145.1\|1963614_1964493_-	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.2e-12	26.4
WP_172618959.1\|1964555_1965752_-	ABC transporter permease	NA	NA	NA	NA
WP_003580801.1\|1965748_1966849_-	hypothetical protein	NA	NA	NA	NA
WP_003576225.1\|1967076_1968423_-	C1 family peptidase	A0A2H4UTL8	Bodo_saltans_virus	6.9e-47	29.8
WP_003571381.1\|1968655_1969975_-	C1 family peptidase	R4TV59	Phaeocystis_globosa_virus	9.2e-60	34.5
WP_003567260.1\|1970219_1970597_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_003567258.1\|1970711_1971002_-	N-acetyltransferase	NA	NA	NA	NA
WP_003567256.1\|1971223_1971766_+	dUTP diphosphatase	J9PV85	Bacillus_phage	8.1e-39	48.6
WP_003580798.1\|1971782_1973147_+	DNA repair protein RadA	NA	NA	NA	NA
WP_003567252.1\|1973168_1974284_+	PIN/TRAM domain-containing protein	NA	NA	NA	NA
WP_003580795.1\|1974387_1975284_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_016366635.1\|1975564_1976470_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-34	39.0
WP_003577837.1\|1976473_1977250_+	ABC transporter permease	NA	NA	NA	NA
WP_080596037.1\|1977287_1977398_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003577835.1\|1977441_1977555_+\|bacteriocin	bacteriocin	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP041944

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection