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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP041965 Xanthomonas citri pv. glycines strain 2098 chromosome, complete genome 8 crisprs RT,WYL,DEDDh,csa3,cas3,DinG 1 2 7 0

Results visualization

1. NZ_CP041965
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041965_1 260948-261048 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041965_2 2133901-2133987 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041965_3 2134114-2134202 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041965_4 2169844-2169916 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041965_5 2261591-2261810 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041965_6 2409413-2409498 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041965_7 2664221-2664326 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041965_8 4824255-4824370 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 NZ_CP041965.1 2261487-2261509 1 0.957
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 NZ_CP041965.1 2261568-2261590 1 0.957

1. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to position: 2261487-2261509, mismatch: 1, identity: 0.957

cgatgtccgcggcgctgggcgcg	CRISPR spacer
cgatatccgcggcgctgggcgcg	Protospacer
****.******************

2. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to position: 2261568-2261590, mismatch: 1, identity: 0.957

cgatgtccgcggcgctgggcgcg	CRISPR spacer
cgatatccgcggcgctgggcgcg	Protospacer
****.******************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 NZ_CP029836 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed6, complete sequence 54369-54391 2 0.913
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 NZ_CP049816 Monaibacterium sp. ALG8 plasmid unnamed5, complete sequence 23490-23512 2 0.913
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 NC_012811 Methylorubrum extorquens AM1 megaplasmid, complete sequence 282708-282730 2 0.913
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 NZ_CP013104 Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence 849690-849712 2 0.913
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 590731-590753 2 0.913
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 NZ_CP046573 Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence 484319-484341 2 0.913
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 MT553342 Microbacterium phage Kelcole, complete genome 12556-12578 2 0.913
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 NC_048068 Microbacterium phage OneinaGillian, complete genome 12206-12228 2 0.913
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 MT310894 Microbacterium phage Tempo, complete genome 12583-12605 2 0.913
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 NZ_CP016083 Streptomyces sp. SAT1 plasmid unnamed3, complete sequence 800776-800798 3 0.87
NZ_CP041965_5 5.2|2261733|23|NZ_CP041965|PILER-CR 2261733-2261755 23 NZ_CP016453 Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence 340759-340781 3 0.87
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NC_016021 Komagataeibacter medellinensis NBRC 3288 plasmid pGXY020, complete sequence 55056-55081 5 0.808
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP026091 Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence 1786962-1786987 5 0.808
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NC_014309 Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome 2016276-2016301 5 0.808
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NC_008381 Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence 437788-437813 5 0.808
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP026093 Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence 1787098-1787123 5 0.808
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP021767 Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence 1730088-1730113 5 0.808
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP017105 Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence 2368246-2368271 5 0.808
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_LN606601 Acetobacter senegalensis strain 108B plasmid 1P, complete sequence 24493-24518 5 0.808
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 CP006880 Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence 2448650-2448675 5 0.808
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 637072-637097 5 0.808
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP026494 Escherichia coli strain HS13-1 plasmid pHS13-1-IncF, complete sequence 81017-81042 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_KP119165 Escherichia coli strain QT598 plasmid pEC598, complete sequence 89134-89159 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP043952 Escherichia coli strain ST95-32 plasmid pST95-32-2, complete sequence 174385-174410 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP049349 Escherichia coli strain 3R plasmid p3R-1, complete sequence 134844-134869 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP051220 Escherichia coli strain SFE8 plasmid pSCZP1, complete sequence 28297-28322 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP005931 Escherichia coli APEC IMT5155 plasmid p1ColV5155, complete sequence 3427-3452 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP022731 Escherichia coli strain SA186 plasmid pSA186_2, complete sequence 38243-38268 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP030791 Escherichia coli strain APEC O2-211 plasmid pAPEC-O2-211A-ColV, complete sequence 75163-75188 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP041299 Escherichia coli O1:H42 strain CLSC36 plasmid pCys-1, complete sequence 68872-68897 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP031107 Escherichia coli strain AMSCJX02 plasmid pAMSC2, complete sequence 191771-191796 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_LR740759 Escherichia coli strain BEN5202 isolate laying hen 51 weeks old plasmid paAPEC5202 22663-22688 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP019055 Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence 20678-20703 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP029742 Escherichia coli strain AR_0085 plasmid unnamed1, complete sequence 93641-93666 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NC_007675 Escherichia coli A2363 plasmid pAPEC-O2-ColV, complete sequence 61627-61652 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP019909 Escherichia coli strain MDR_56 plasmid unnamed3, complete sequence 23831-23856 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP042245 Escherichia coli strain PU-1 plasmid pColV-PU1, complete sequence 224299-224324 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_MG825372 Escherichia coli strain 1106 plasmid p1106-IncFIB, complete sequence 69836-69861 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_MG825378 Escherichia coli strain 1108 plasmid p1108-IncFIB, complete sequence 169091-169116 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NZ_CP025329 Escherichia coli strain ExPEC XM plasmid unnamed 271246-271271 6 0.769
NZ_CP041965_5 5.1|2261649|26|NZ_CP041965|PILER-CR 2261649-2261674 26 NC_023327 Escherichia coli ACN001 plasmid pACN001-B, complete sequence 152934-152959 6 0.769

1. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to NZ_CP029836 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed6, complete sequence) position: , mismatch: 2, identity: 0.913

cgatgtccgcggcgctgggcgcg	CRISPR spacer
cgacgtccgcggcgctgggcgcc	Protospacer
***.****************** 

2. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to NZ_CP049816 (Monaibacterium sp. ALG8 plasmid unnamed5, complete sequence) position: , mismatch: 2, identity: 0.913

cgatgtccgcggcgctgggcgcg	CRISPR spacer
tgatgtccgcgacgctgggcgcg	Protospacer
.**********.***********

3. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 2, identity: 0.913

cgatgtccgcggcgctgggcgcg	CRISPR spacer
cgatgtccgcggtgcggggcgcg	Protospacer
************.** *******

4. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 2, identity: 0.913

cgatgtccgcggcgctgggcgcg	CRISPR spacer
cgatgtccgcggcgttgcgcgcg	Protospacer
**************.** *****

5. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.913

cgatgtccgcggcgctgggcgcg	CRISPR spacer
cgatgtccgcggcgccgggcgag	Protospacer
***************.***** *

6. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 2, identity: 0.913

cgatgtccgcggcgctgggcgcg	CRISPR spacer
cgatgtccgcggcggcgggcgcg	Protospacer
************** .*******

7. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to MT553342 (Microbacterium phage Kelcole, complete genome) position: , mismatch: 2, identity: 0.913

cgatgtccgcggcgctgggcgcg	CRISPR spacer
cgatgtcctcggcgctgagcgcg	Protospacer
******** ********.*****

8. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to NC_048068 (Microbacterium phage OneinaGillian, complete genome) position: , mismatch: 2, identity: 0.913

cgatgtccgcggcgctgggcgcg	CRISPR spacer
cgatgtcctcggcgctgagcgcg	Protospacer
******** ********.*****

9. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to MT310894 (Microbacterium phage Tempo, complete genome) position: , mismatch: 2, identity: 0.913

cgatgtccgcggcgctgggcgcg	CRISPR spacer
cgatgtcctcggcgctgagcgcg	Protospacer
******** ********.*****

10. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.87

cgatgtccgcggcgctgggcgcg	CRISPR spacer
cggtgtccgcggcgctgggcgaa	Protospacer
**.****************** .

11. spacer 5.2|2261733|23|NZ_CP041965|PILER-CR matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 3, identity: 0.87

cgatgtccgcggcgctgggcgcg	CRISPR spacer
cgatgttcgcggcgctgggcggt	Protospacer
******.**************  

12. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NC_016021 (Komagataeibacter medellinensis NBRC 3288 plasmid pGXY020, complete sequence) position: , mismatch: 5, identity: 0.808

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
acgcgatgtccgagacgctgggtgct	Protospacer
  ********** *.********** 

13. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
aggccatatccgcggcgctgggtgcg	Protospacer
 .** **.*****************.

14. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 5, identity: 0.808

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
aggccatatccgcggcgctgggtgcg	Protospacer
 .** **.*****************.

15. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NC_008381 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence) position: , mismatch: 5, identity: 0.808

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcggag	Protospacer
********** **********  * .

16. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
aggccatatccgcggcgctgggtgcg	Protospacer
 .** **.*****************.

17. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
aggccatatccgcggcgctgggtgcg	Protospacer
 .** **.*****************.

18. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 5, identity: 0.808

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
aagcgatgtcggcggtgctgggtggc	Protospacer
 ********* ****.********  

19. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_LN606601 (Acetobacter senegalensis strain 108B plasmid 1P, complete sequence) position: , mismatch: 5, identity: 0.808

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
acgcgatgtccgagacgctgggtgct	Protospacer
  ********** *.********** 

20. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 5, identity: 0.808

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
aagcgatgtcggcggtgctgggtggc	Protospacer
 ********* ****.********  

21. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
gcgcgatgtgcgcggggctgggtgcc	Protospacer
  ******* ***** ********* 

22. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP026494 (Escherichia coli strain HS13-1 plasmid pHS13-1-IncF, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

23. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_KP119165 (Escherichia coli strain QT598 plasmid pEC598, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

24. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP043952 (Escherichia coli strain ST95-32 plasmid pST95-32-2, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

25. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP049349 (Escherichia coli strain 3R plasmid p3R-1, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

26. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP051220 (Escherichia coli strain SFE8 plasmid pSCZP1, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

27. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP005931 (Escherichia coli APEC IMT5155 plasmid p1ColV5155, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

28. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP022731 (Escherichia coli strain SA186 plasmid pSA186_2, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

29. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP030791 (Escherichia coli strain APEC O2-211 plasmid pAPEC-O2-211A-ColV, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

30. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP041299 (Escherichia coli O1:H42 strain CLSC36 plasmid pCys-1, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

31. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP031107 (Escherichia coli strain AMSCJX02 plasmid pAMSC2, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

32. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_LR740759 (Escherichia coli strain BEN5202 isolate laying hen 51 weeks old plasmid paAPEC5202) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

33. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP019055 (Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

34. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP029742 (Escherichia coli strain AR_0085 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

35. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NC_007675 (Escherichia coli A2363 plasmid pAPEC-O2-ColV, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

36. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP019909 (Escherichia coli strain MDR_56 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

37. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP042245 (Escherichia coli strain PU-1 plasmid pColV-PU1, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

38. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_MG825372 (Escherichia coli strain 1106 plasmid p1106-IncFIB, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

39. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_MG825378 (Escherichia coli strain 1108 plasmid p1108-IncFIB, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

40. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NZ_CP025329 (Escherichia coli strain ExPEC XM plasmid unnamed) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

41. spacer 5.1|2261649|26|NZ_CP041965|PILER-CR matches to NC_023327 (Escherichia coli ACN001 plasmid pACN001-B, complete sequence) position: , mismatch: 6, identity: 0.769

cagcgatgtccgcggcgctgggtgca	CRISPR spacer
cagcgatgtcggcggcgctggcaagt	Protospacer
********** **********  .  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1241178 : 1281287 29 Escherichia_phage(16.67%) transposase,integrase,protease attL 1233894:1233911|attR 1271658:1271675
DBSCAN-SWA_2 1977361 : 1991886 15 Micromonas_sp._RCC1109_virus(10.0%) tRNA NA
DBSCAN-SWA_3 1996733 : 2002434 10 Pseudomonas_phage(42.86%) NA NA
DBSCAN-SWA_4 2006396 : 2018077 14 Klebsiella_phage(11.11%) terminase,head,capsid,portal NA
DBSCAN-SWA_5 2600684 : 2621121 33 Xanthomonas_phage(77.78%) NA NA
DBSCAN-SWA_6 4179184 : 4189266 10 Escherichia_phage(28.57%) NA NA
DBSCAN-SWA_7 4380690 : 4428513 62 Stenotrophomonas_phage(58.33%) integrase,portal,terminase,capsid,head,plate,holin,tRNA,tail attL 4386849:4386868|attR 4426630:4426649
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage