CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP036353	Planctomycetes bacterium CA11 chromosome, complete genome	3 crisprs	RT,csa3,cas3,Cas9_archaeal,DinG,WYL	1	2	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP036353_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036353_1

4385263-4385342

Orphan

Consensus_repeat	Method
GCAAGCCAACGGTGCCACCCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP036353_1

>merge|NZ_CP036353|1|4385263-4385342|CRISPRCasFinder
GCAAGCCAACGGTGCCACCCGCCCGAACGGTTGTGTATCATGTGTCCGGTCTTAATAGCAAGCCAACGGTGCCACCCGCC

>NZ_CP036353|1|1|4385263-4385342|CRISPRCasFinder
GCAAGCCAACGGTGCCACCCGCC	CGAACGGTTGTGTATCATGTGTCCGGTCTTAATA
GCAAGCCAACGGTGCCACCCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036353.1\|WP_154899713.1\|4391750_4393175_+\|exo-alpha-sialidase	unknown	unknown	gnl\|CDD\|271234
NZ_CP036353.1\|WP_154899703.1\|4382153_4383590_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|293765
NZ_CP036353.1\|WP_154899699.1\|4379091_4381293_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP036353.1\|WP_002647450.1\|4372989_4373418_-\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379297
NZ_CP036353.1\|WP_154899691.1\|4370451_4372086_-\|FecR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377406
NZ_CP036353.1\|WP_154899701.1\|4381565_4381886_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036353.1\|WP_154899711.1\|4390302_4391691_+\|DUF1552-domain-containing-protein	unknown	unknown	gnl\|CDD\|377875
NZ_CP036353.1\|WP_154899719.1\|4396773_4397145_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036353.1\|WP_154899693.1\|4373673_4374639_-\|DUF1559-domain-containing-protein	unknown	unknown	gnl\|CDD\|284919
NZ_CP036353.1\|WP_081459425.1\|4399631_4400630_+\|S1/P1-nuclease	unknown	unknown	gnl\|CDD\|211382
NZ_CP036353.1\|WP_002645273.1\|4397365_4398505_-\|DUF4419-domain-containing-protein	unknown	unknown	gnl\|CDD\|379593
NZ_CP036353.1\|WP_154899709.1\|4388286_4390209_+\|DUF1592-domain-containing-protein	unknown	unknown	gnl\|CDD\|377886
NZ_CP036353.1\|WP_154899695.1\|4375117_4376482_-\|DUF1501-domain-containing-protein	unknown	unknown	gnl\|CDD\|369346
NZ_CP036353.1\|WP_081459541.1\|4372078_4372690_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274379
NZ_CP036353.1\|WP_154899717.1\|4394552_4396025_+\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|365919
NZ_CP036353.1\|WP_154899705.1\|4385698_4386337_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036353.1\|WP_154899715.1\|4393309_4394068_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036353.1\|WP_154899707.1\|4386370_4387708_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP036353.1\|WP_154897086.1\|4383723_4384884_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP036353.1\|WP_154899697.1\|4376935_4378564_+\|exo-alpha-sialidase	unknown	unknown	gnl\|CDD\|271234

Protein	Function_ID	Function_description	E-value
NZ_CP036353.1\|WP_154899713.1\|4391750_4393175_+\|exo-alpha-sialidase	gnl\|CDD\|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	2.49674e-05
NZ_CP036353.1\|WP_154899703.1\|4382153_4383590_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|293765	cd16146, ARS_like, uncharacterized arylsulfatase. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	2.93018e-110
NZ_CP036353.1\|WP_154899699.1\|4379091_4381293_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.0129e-22
NZ_CP036353.1\|WP_002647450.1\|4372989_4373418_-\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	0.0051158
NZ_CP036353.1\|WP_154899691.1\|4370451_4372086_-\|FecR-domain-containing-protein	gnl\|CDD\|377406	pfam04773, FecR, FecR protein. FecR is involved in regulation of iron dicitrate transport. In the absence of citrate FecR inactivates FecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm.	1.3237e-07
NZ_CP036353.1\|WP_154899697.1\|4376935_4378564_+\|exo-alpha-sialidase	gnl\|CDD\|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	6.99256e-59
NZ_CP036353.1\|WP_154899711.1\|4390302_4391691_+\|DUF1552-domain-containing-protein	gnl\|CDD\|377875	pfam07586, HXXSHH, Protein of unknown function (DUF1552). A family of proteins identified in Rhodopirellula baltica.	1.17535e-95
NZ_CP036353.1\|WP_154899693.1\|4373673_4374639_-\|DUF1559-domain-containing-protein	gnl\|CDD\|284919	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559). A large family of paralogous proteins apparently unique to planctomycetes.	2.60126e-55
NZ_CP036353.1\|WP_081459425.1\|4399631_4400630_+\|S1/P1-nuclease	gnl\|CDD\|211382	cd11010, S1-P1_nuclease, S1/P1 nucleases and related enzymes. This family summarizes both S1 and P1 nucleases (EC:3.1.30.1) which cleave RNA and single stranded DNA with no base specificity. S1 nuclease is more active on DNA than RNA. Its reaction products are oligonucleotides or single nucleotides with 5' phosphoryl groups. Although its primary substrate is single-stranded, it may also introduce single-stranded breaks in double-stranded DNA or RNA, or DNA-RNA hybrids. It is used as a reagent in nuclease protection assays and in removing single stranded tails from DNA molecules to create blunt ended molecules and opening hairpin loops generated during synthesis of double stranded cDNA. P1 nuclease cleaves its substrate at every position yielding nucleoside 5' monophosphates, and it does not recognize or act on double-stranded DNA. It is useful at removing single stranded strands hanging off the end of double stranded DNA and at completely cleaving melted DNA for simple DNA composition analysis.	7.21354e-63
NZ_CP036353.1\|WP_002645273.1\|4397365_4398505_-\|DUF4419-domain-containing-protein	gnl\|CDD\|379593	pfam14388, DUF4419, Domain of unknown function (DUF4419). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, eukaryotes and viruses. Proteins in this family are typically between 348 and 454 amino acids in length.	5.46457e-94
NZ_CP036353.1\|WP_154899709.1\|4388286_4390209_+\|DUF1592-domain-containing-protein	gnl\|CDD\|377886	pfam07631, PSD4, Protein of unknown function (DUF1592). A region of similarity shared by several Rhodopirellula baltica cytochrome-like proteins that are predicted to be secreted. These proteins also match pfam07627, pfam07626, and pfam07624.	3.91389e-56
NZ_CP036353.1\|WP_154899695.1\|4375117_4376482_-\|DUF1501-domain-containing-protein	gnl\|CDD\|369346	pfam07394, DUF1501, Protein of unknown function (DUF1501). This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.	1.09292e-85
NZ_CP036353.1\|WP_081459541.1\|4372078_4372690_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274379	TIGR02989, Sig-70_gvs1, RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are abundantly found in the species Rhodopirellula baltica (11), and Verrucomicrobium spinosum (16) and to a lesser extent in Gemmata obscuriglobus (2).	5.00214e-38
NZ_CP036353.1\|WP_154899717.1\|4394552_4396025_+\|aldehyde-dehydrogenase	gnl\|CDD\|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	0
NZ_CP036353.1\|WP_154897086.1\|4383723_4384884_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	3.53625e-25
NZ_CP036353.1\|WP_154899707.1\|4386370_4387708_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.12004e-28

>NZ_CP036353.1|WP_154897086.1|4383723_4384884_+|IS481-family-transposase
MVWKECNRVSERKEFVLLASVEGANFSELCLRFGIARKTGYKWLQRYRDEGGPGLTDRSRCPHTFRSPTSKKMESAVLAIRDQHPTWGGRKIHHRLLALGYKHVPAASTITSILKRHLRIDPEESKKRQEFQRFERSEPNELWQMDFKGEFPTLDQRWCYPLTVMDDHSRFSLVLKACGNQKGPTVQKHLRDAFRLYGLPHAMLMDNGTPWGSTVSPGSYSRFSVWLLDLDVRVIHGRPYHPQTQGKEERFHRTLKQEVLQGRRFKNHAELQKTFDGWQDVYNQERPHEALDYKTPIERYRVSSREYPERLRKFEYDSSFAVRKVGCEGRIVFKNKEYYLSRSFRGQLVGIRSNGQDGEWDVYYRTFKVGKIELRKHRPRRKSRRS
>NZ_CP036353.1|WP_154899703.1|4382153_4383590_+|sulfatase-like-hydrolase/transferase
MRNRRVFIAVTGVVFALVSTGASFAAKAERSGKPNIILVMADDQGWGDTSYNGHPFVKTPELDAMAKDAFVFDRFYAGAPVCSPTRASVMTGRNPNRTKVTNHGRYMRPHEQTIAETLKAAGYVTGIFGKVHLGSGQPDSPCNPSGMGFDEWVIGLNFFDNDPYLSRMGKIEHRKGKGSVILMDDTLEFLEKHKDGEQPIFTVVWFPSPHDPHAEVPEGPSLYKGKPHAGYYREITLLDQQVGRLRRALRNMNIAENTIVWYCSDNGGLVKETSGGREKKGSIYEGGLRVPGIIEWPARKLKGRTSVPVATFDIYPTLLSLAGVELYAPHPLDGMDVSGIITGSVTKRSKPMGFWHQLQRGQGTRSDQIQKAIMEKQQAGASLPHDPVRMRKDVDEFPQFPEETTTGHAAWNDWPWKLHRIKGTKFELYNLSDDPMEKTDLSKNPEQAQRVKQMQQELDAWMRSVIRSINGKDYQESK
>NZ_CP036353.1|WP_154899701.1|4381565_4381886_+|hypothetical-protein
MPDKTILTIILSIFSTINGIVFGGFIGFYGLLYFMFYTQIEGFWPFFIFTVPIGMILFGAVGFALGFSLAKSLSESTLLKLIYANLVIIVSVALFIYSLFQNAITM
>NZ_CP036353.1|WP_154899699.1|4379091_4381293_+|tetratricopeptide-repeat-protein
MNEINPQIPAEHDPIKRSTKTNLWGVTLLYLFVILLVFSRCLPYPLLDWDDNLHLTDNPSLNPVSFKGMWNIWSQPYEGLYIPLSYSFFAIEVYLTRLFGFQDHAVLAPYIFHAGSLLLHLINSLLIYRILNIIVNDTRAACLGGLLFVLHPLQVESVVWISETRGLLSNLFSIATIYFTLKYVKKSETSTPAQTGKTNFDLIIATMCFVLSMLAKPSSVTTPLIIGILISVFFAEHLKKLGRWILCWLMLALAFIFITRGEQSDLLFDSPLWARPLIFGDAIAFYFQKLFIPTPLIMQYDKSIKLILNTSWIYWSWLIPCLIFLLACIPRQRRILLTSLAIFIAGLLPVLGLIPFSYQFISTVADRYVYLAMLGPALALAWLLRSHHKTVSLSLTYAALFLFAGLSFMQTATWSNSRTLYQHCLAHNPHAFIASNNLGHLAFNNQKYDEALHHFKNAISVIPDDVGTNENLGTIYMELGRKDQALQYFNKVLKIDPKHAGAHFALGVYYEGREDNKKAFNHYFQSLQAKPQNADALFGLGNLARKQKNYEEALRYYQVALKFNPDAPGIRETLGNLYLELGDMTNAQHQFDLSRKQGLLDPANEFNLGLMAAKNADLQKAIKHYESALQILDSTKKPDLHRQVIQELTFTYNMRGTTLQKKQDHEQAEYYFRLAIKTSPDFAPAYFNLGESLYRLGKTQAAISVLQTALTLVPPNSEPAIDIQKRIDLYQKK
>NZ_CP036353.1|WP_154899697.1|4376935_4378564_+|exo-alpha-sialidase
MRHFLILTTMLLLMVHAPLHADSKDTPVATGELLKDFVHPPVNFSPGAESNSEARKYQGIPTIERTPGGRLWAGWYAGPINEDRFNYVMAAISDDDGNTWSDLKFVINPDGDGPRRASDPCFWLDPSGKLWLFWWMNGGGLNVTMSITTENPDAENPNWTEPRALFPGVMINKPIVTKNGEWLMPAAIWRQDDSCRVMVSKDQGRTWALRGAANVPKDRRNCDEPMLVERQDGSVWLLVRTSSYGIGDSVSTDAGRSWTEVKDHLQQTTSRFHIQRLASGNLLLIKHNGIDERSRGRNHLTAYLSADDGKSWKGGLLLDARDTVSYPDATQAPDGTIYVIYDWNRADEKHILLTTFTEADVLAGKFQSSKARQRVLINHATGVNSKPWLKKQRVTSLNKHETAAVLLKKPGAQLKPVNGEIRDIKLGKAIFSNRSYVFHDKLPSFLQDGKFIFSPMEQTEVVCTSPGVVYVVTPLPDRNRDSVTDELQKQGFELAAVPEFVLFLMPGGREIPGNVCSVYQRRVSAGDRIKFGKWGVVITKPE
>NZ_CP036353.1|WP_154899695.1|4375117_4376482_-|DUF1501-domain-containing-protein
MAGKPCSGPVNRREFMRIGSLCLGGLSLSQLLALRSEAGQPRQDTSVILLFLHGGPSQLETYDLKPEAPSDYRSLFNPIATNVPGMDICELFPRQAKIADKFSLVRSLHHDVGIHSDGGIIVLTGKRPSKLDPSSGSKSEHPDFGSVTSAVRGLSGMGTPPYVSIPSKFYMVQPTYLGLQHGPFESTEPSSANYRPPSLKLQAGLDGQHLVERRQLLRQIDRLRNDLDLNGDLAGNDKFRDLAFQMLTSPDAASSFEIDREPDSLRDRYGRNMWGQGCLLARRLAESGCGVVSLFFNTPKNGQEFTNWDDHILNAGRPGHFAKYMKVRLPYMDQALATLIEDIHERSLEKKIMVVAVGEFGRTPRLSSNNSGTGRNHWPQAYTALFSGGNLKMGQVVGATNSKAEYPTHSPCTPQDMLATIYQHLGIDFTQSLVDHQGRPIPILPHGKPIAELI
>NZ_CP036353.1|WP_154899693.1|4373673_4374639_-|DUF1559-domain-containing-protein
MLNRSHGRRSGFTLIELLVVIAIIAILISLLLPAVQQAREAARRSTCKNNLKQIGLALHNYHETYGMFPIGGTGDRDLPPRVSWQVRILPFVDQATLFNQIDMSGATASAVQATLADGRIVREIPMTIYTCPSDPYNQPRGGYAQCNYAGSMGSQSAPSGSSACSPFQVYALKSTLYGKTLLKGGISGMISRNGASIRIADVLDGSSNTIQVGETLPSCLDADRGSWSYAQSTCNAETMTLTPINEFTTCDQLGPSRRITNSACTAHTQWNYSLGFKSMHSGGAHFLMVDGAVRFLSENIDHADTFQHLGDRADGAVLGEF
>NZ_CP036353.1|WP_002647450.1|4372989_4373418_-|carboxypeptidase-regulatory-like-domain-containing-protein
MNRFTGILLLISAYTLFGCSGSDGPQVAAVEGTVTWEGKPLADAGVAFTPEKGPVAIGRTDESGQFSLSTQGRDGAVVGPHRVTIEAFEPLPPGKKAVSEEGEVLIVPVSRIPSKYGILTKSGLEARVTANDSENNFEFELK
>NZ_CP036353.1|WP_081459541.1|4372078_4372690_-|sigma-70-family-RNA-polymerase-sigma-factor
MGVRLLIETRITACCHDKDGSGVVLEKLAEQKNQESQFTKLLTAHRRQLYAFIYSLLADHADAEDVYQRCSMIMWEKFDQYDSSCDFLPWAMGIAFYEVKNFQRVSSRDRHHFSEQLLEQLFACMSTHKNDHSTQMLSLEKCLKSLRQKDLWLVQQVYWERRKCSAVAEEIGMKINALYDRVGRIRSQLKDCVRRRVAEVEHV
>NZ_CP036353.1|WP_154899691.1|4370451_4372086_-|FecR-domain-containing-protein
MSDNNQKNDEEFRRLLSRLAEGSLDKADAEVLESLLINQPERQALYLEIMWLDASLIELGGVHNSAPELKVIRAQRKYSFPFSGWALTAIALSCLVVTVLLTFPVFEQRKQFAVNESAEKEVESTTGRKNHDELLSEAILIAGHRTVLRGSSSPISIGSRFRFAEHYMLQEGLIKILFASGAEVILSAPAQFQVVDNEKLAVNLGNCSVYAPAGAEGFEVTTPTSEVIDLGTRFSVEVAEDGASSVSVVDGEAEVTPLSKSQKRTLFKGDSAYVGTDLHILEGGEKPQVDAYVASIPDRLIAYETIQDKQGQAKELSSLTVQRGGVSRTYHRDDFILPGINHFRPQTNVFGVVPANSPPDEFNRFGSMNLLFASGFINPGGQKDYFEGDFISGKDGTPGMNIVFDQPVINSPGPDIVIFDAQSIAHSLEGDVFHLYPHSSHPNAHPATFMKYDIDGYSADAQFMTGCRLIHLSQDFAEDGTPLPKFGRSQLINRVPSRMFAIGIDLDDMNIPPGGSITGLFLQDAQDDKDCIDPVVIVGLPPVK
>NZ_CP036353.1|WP_154899705.1|4385698_4386337_-|hypothetical-protein
MQYFNLRRFAVLLVILSGTSTLLAADAELARHITVPTGWKGEQISLPPSFAREMKFKGLEEARFSPGMFQEKSDTFFSYFFVFKIDPGSELTQKNIERELLTYYQGLSRTIFNSRKAKVDTSGFSCELKKVVPVDPQKIYPEGLTEYSATVKWIEPFVTQKPQTLHLIIQVWTDKTTKDGYLFACVSPQEMKAEIWQSMQNIRDSFYRSLQK
>NZ_CP036353.1|WP_154899707.1|4386370_4387708_-|Gfo/Idh/MocA-family-oxidoreductase
MTSNSDTTRRDFLKTSVAAAAATTFAAPAFVRGQNLNSQLQFAGIGTDGKGYSDIKLIASHDKVKCVAFCDVDLSRTKKVKPLAPEAPVFQDYKIMLDELGDKIDAVSVSTPDHTHAIISMDAMQRGKHVYCQKPLTRTVWEARQMRLQAKKSGVITRMGNQIHSHSAYRTAAKAIQDGVIGKVKAVHSYVGTTGHGRSGLLNKPANNEAVPKTLDWNLWISVAPMRPYGGNRVYHPFTWRDWQDFGSGAIGDFGCHLLDPVYTALKITGDPISVHSEHTGMNDEVWPAQETIKYVIPGTQYTAGSSLPITWYDGGRRPSDSIAKLLPGQSLPSGGSIFVGEKGNLILPHYRQPFVNIEGVNIEPVESLDHYHGWVDGCLSGKQPSDGFEYGGHLTEAVQLGNVAAFFPGETLEFDGKALKITNNSEANKYLTRDYRAGFEIASI
>NZ_CP036353.1|WP_154899709.1|4388286_4390209_+|DUF1592-domain-containing-protein
MSVLEARFVRGVIAGLVWGLWVCPQAGLAASKENKALAARKAEAEQFFSKQIKPFIKKYCIDCHQNRRPTEAGLSFDPALRSPGHAAFSEKWKKSAARVKAHDMPPEGLDQPSDKERQMFAKWMQQIKYLSPKDPGPFVIRRLTKTEYGNTLHDLLGVDPDIVASLPDEVSGEGYLNSLSPLQLEQYLAISEKVLNQVVAPEGKPPTAIQLELFGEPPTSETDAKSNARKLAKSLARSAYRRPPSAAEVDVLLKVFELGRQNDLSYQASCRLMLKAILVSPQFLFITPAREVETEKGIVPLDDYQLASRLSYLLWATMPDAELLTLADQGKLHELPVLKDQVTRMLMDPRSRALFDGFGAQWLKLGNLHTRTFDPKKFPQMTAALRSAMYDEARLFFESIVRENRSVSEFIDSDYTFLNGNLASIYGLENTVTGPEMRKVKLTNGNRGGILGMPGVLAATSFPNRTSPVNRGVWVLEQVLGDHVPAAPPDVPSLEKQDQKQIASLTLRERTELHRSEAVCANCHRLLDPIGFGLENFDAIGRWRDLDENGQAIDASGELPGGRNFSNPKELKAIIAQHNAKFSRNLVERLLAYALCRRLEGYDEIVIDGLMQKIAKDDYRMQTLITEVVTSYPFMHRRIE
>NZ_CP036353.1|WP_154899711.1|4390302_4391691_+|DUF1552-domain-containing-protein
MSNYKRINRRTCLKGLGATLALPLLDVMGWAEDSEKKTFQPPVRMGFMYMPHGVIMDQFWPKDPKTFLTSPPPALESLHPVLDQCLLMKGIAGVSNGPFRGAPHALELSTWLTAALPDPDKRDEISISISADQIAANSLGAFTALPSLELATMPQTWKENQAGLNEAYYSHCSFRSPTQAVPAETNPRNVLNRLFNKKEKGDGLSANGMSSLDRSMLDLVIGGARDLRRTLSKTDQRKLDQYLDSVRSVERRIAAIEIRQKEAALEKAGVRPSRSHKTDSPPIEIKIPEGDKRSEYMQVMCDLNVLAFQTDTTRVCTYIGSTPNGVSYPELGFNDQHHSQTHHNGEKKKVDKVAAITKFNIDQFAYMVNKMHSLKEGDGTLLDNCIMMWGSGLEDGDRHSRANLPFILAGRGGGAINTGRFLPDVKGNQGDLLTTLLTCAGIPLDRPVGIATKQIAEIPAQS
>NZ_CP036353.1|WP_154899713.1|4391750_4393175_+|exo-alpha-sialidase
MRITIRSLFSSLLLVIIYTTNAVAQDSSKSSTEERPAPRIKLTMGEPHVIVRGIRPEEQLWGPYQFPRPYRLKDRFVVSVHVKNDDISNYGATALWFESRDQGVTWKEVDDSVAQECGLLLPSGDRVYLPPESGVDVSEYKQIPWNKYTPGYDFSKQAEEGTLPIPDGMTFWMGGTTINAFNADRLPPSLSQKEWTLYRIPAEQTKPVLEHAEVDWPFLTRVVHVSRNGKKVLKSIFPRGNPKLGPDGAIWVSVFSGEGHLNPENGQYSPYYSAEIFRSEDNGKTFQRRSHLEYEADGHAFPYKSGGFSDSDFEFMPDGSIVWFLRSTWYSSTGKEWDPMYMTRSTDSGRTWSKPVKFDKVGILPRLCRLDNGVTLLCYARPGTFVRAALNDSGTEWTEPLVVMTPDDRSGLANKPVAAPTFHDWDGSCNNPEIVPLDENSALLFYSDFYYPDESGVKRKTILCRKITVQREVE
>NZ_CP036353.1|WP_154899715.1|4393309_4394068_-|hypothetical-protein
MYRLSALLMLLLPALVQAAPHEIIHVVNPHHVTRAEYLADLRANSSLTDDQIDDRYREFLQDRERSQRGLILKLRVLIKKYRLKGIYLQGLSEKNHQATLDYLESLKQYEKTNTINESEFEKRKKDQNRLDLSELGAAGQLVITGELQTILPAEDAKAFEAVNSVKSDGSIKFVEKEEHERENAIVRNLMKADGVAVIVLSRDHNLADNLKELGFSCRYVMMGSSPPVESNIDTFKKSIFKRGDKLTGNRLK
>NZ_CP036353.1|WP_154899717.1|4394552_4396025_+|aldehyde-dehydrogenase
MPAWPEKMYIDGKWVDGRSETSWTITNPATREPLAEIALANASDVDLAVTAARRAFDKGEWPRLDPLQRGRLLYKLAERIRESAEDLAMTDTLNIGKPIRDTLGFDIPCGADVIESYAGLPDKIAGHSYGGLPDNVTMQFREPMGVIAAIVPWNYPMTNAAIKLAPILACGNTVVLKPSEVSPLSALMLAKMAEEVGFPPGVINVIHGTGAEAGTALVKHPGINKIAFTGRYETGAQLMEAAKDGMKGVLLELGGKTPSVVFPDAPLDHVVNGVITGIFCHLGQICVAGSRLLVHESQHDELLERIIAKAQSLKQGDPTDPEMHLGCLATPTHCDFVRSRVEQAKQEGARLVLSGDISDDPLDCFYPPTIFDQVSPDMAVAKEEVFGPVLSVMTFKTEEEAIRIANDSDFGLMANIWSTDGTRALRVARELQAGRISINGGGYLRPNVPIYGYKKSGFGAELGFIEAAHEFCNSKSVIYSLATEKSPWPE
>NZ_CP036353.1|WP_154899719.1|4396773_4397145_-|hypothetical-protein
MKHIILPSLIILVACTETHITDHTVEVISSEGRTTSEPPSPEIEGLSFGGIPSNEERDGEAHTEEIKWDTGIADLVSGYSRREVMARNHVNRIEKGKSKDNWRDANDFLQDDGSDYYQVFQSL
>NZ_CP036353.1|WP_002645273.1|4397365_4398505_-|DUF4419-domain-containing-protein
MTHTKFPVSPDVIPKTPPEKVDYVGKLRVAFRRPIEATWFPRKPLVACDDDHALITAMKMSFYDHFPLRLSPDVIWITLVRGFALHVNENAESLRHHFVSHSGKKELIVSRTDFSPGEENPWPEVFSDFNQQIADHTGGLSELVQADFSTTGPVERAVSSLMAMETFKSYFEYILYAGCGIPSITLTGTIEDWEKLRHCVRRFADYGLNEWISAIDPILGEFVNAKKGQVNTEFWKSLFRYNSGSGPAVMTGWANVLFPYFKDNNSEKLYPNPYLSDWNERLSIDDQQNWKERWDNPQGVGLSAIPSCFTSVPLTVFWGERETKMRLVGGLLGVSQDDETLEVEPECGWAIVYEEPVDPLSTDYQRLENLQRNRESDKN
>NZ_CP036353.1|WP_081459425.1|4399631_4400630_+|S1/P1-nuclease
MTVKRFILLLVFLALFLLTPESTQAWNYAGHRVIASIAWDQLTPETQAAMIALLKQHPRFEQDFQSRMPEVILKASPAVQDRWLFMRAATWPDIARSFKEADREKYHHGTWHYINQPIYLDTASELSLSSKLPVNTAKSIRQGDDPLQFNILQALEYNVAQMKDPAVSEADKALALCWIMHLTGDSHQPLHSSALFSKGSFPEGDRGGNSIRIGKSNLHAQWDGLLGNSFKDSEIVSQAVGLARDPALKQLGEQATKNLNYADWIDESHALAKSAGYTQLILAAAKQNDSPQNEFLKLKDLPAAYYRTAGAIAVKRAAQSGWRLAAVINGFQ

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Crispr_ID: NZ_CP036353_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036353_2

6304193-6304279

Orphan

Consensus_repeat	Method
GGCATGGGTGGCATGCCCGGAATGGGTGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP036353_2

>merge|NZ_CP036353|2|6304193-6304279|CRISPRCasFinder
GACATGGGCGGCATGGGTGGCATGGGTGGCATGCCCGGAATGGGTGGCGGTATGCCTGGAATGGGCGGCATGCCCGGCATGGGTGGC

>NZ_CP036353|2|2|6304193-6304279|CRISPRCasFinder
GACATGGGCGGCATGGGTGGCATGGGTGGC	ATGCCCGGAATGGGTGGCGGTATGCCT
GGAATGGGCGGCATGCCCGGCATGGGTGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036353.1\|WP_154901062.1\|6290207_6291170_+\|carbohydrate-kinase-family-protein	unknown	unknown	gnl\|CDD\|223598
NZ_CP036353.1\|WP_154901065.1\|6294011_6294302_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036353.1\|WP_154901064.1\|6293192_6293645_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036353.1\|WP_052301257.1\|6312626_6313331_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238008
NZ_CP036353.1\|WP_154901825.1\|6291921_6292710_-\|dihydropteroate-synthase	unknown	unknown	gnl\|CDD\|238380
NZ_CP036353.1\|WP_002647158.1\|6308519_6308816_+\|FmdB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378250
NZ_CP036353.1\|WP_154901826.1\|6300475_6301648_-\|ammonium-transporter	unknown	unknown	gnl\|CDD\|274697
NZ_CP036353.1\|WP_154901066.1\|6296097_6297921_+\|Trk-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|273349
NZ_CP036353.1\|WP_002647162.1\|6304456_6304747_+\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP036353.1\|WP_002647166.1\|6297997_6298687_+\|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223643
NZ_CP036353.1\|WP_002647168.1\|6294603_6296010_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224004
NZ_CP036353.1\|WP_002647159.1\|6307933_6308482_+\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|271355
NZ_CP036353.1\|WP_002647155.1\|6310166_6310799_+\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP036353.1\|WP_154901068.1\|6309088_6310177_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP036353.1\|WP_002647160.1\|6306708_6307839_+\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|236757
NZ_CP036353.1\|WP_154901069.1\|6310942_6312274_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP036353.1\|WP_044238489.1\|6308895_6309102_+\|DNA-gyrase-inhibitor-YacG	unknown	unknown	gnl\|CDD\|367713
NZ_CP036353.1\|WP_002647161.1\|6304907_6306527_+\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP036353.1\|WP_154901063.1\|6291197_6291881_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239946
NZ_CP036353.1\|WP_002647165.1\|6298714_6300202_-\|glycerol-kinase-GlpK	unknown	unknown	gnl\|CDD\|198361

Protein	Function_ID	Function_description	E-value
NZ_CP036353.1\|WP_154901062.1\|6290207_6291170_+\|carbohydrate-kinase-family-protein	gnl\|CDD\|223598	COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism].	1.37571e-64
NZ_CP036353.1\|WP_002647159.1\|6307933_6308482_+\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|271355	cd00446, GrpE, nucleotide exchange factor GrpE. GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. In bacteria, the DnaK-DnaJ-GrpE (KJE) chaperone system functions at the fulcrum of protein homeostasis. GrpE participates actively in response to heat shock by preventing aggregation of stress-denatured proteins; unfolded proteins initially bind to DnaJ, the J-domain ATPase-activating protein (Hsp40 family), whereupon DnaK hydrolyzes its bound ATP, resulting in a stable complex. The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent. Over-expression of Hsp70 molecular chaperones is important in suppressing toxicity of aberrantly folded proteins that occur in Alzheimer's disease (AD), Parkinson's disease (PD), amyotrophic lateral sclerosis, as well as several polyQ-diseases such as Huntington's disease and ataxias.	3.83563e-58
NZ_CP036353.1\|WP_052301257.1\|6312626_6313331_+\|hypothetical-protein	gnl\|CDD\|238008	cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.	0.000168102
NZ_CP036353.1\|WP_154901825.1\|6291921_6292710_-\|dihydropteroate-synthase	gnl\|CDD\|238380	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.	1.36123e-126
NZ_CP036353.1\|WP_002647158.1\|6308519_6308816_+\|FmdB-family-transcriptional-regulator	gnl\|CDD\|378250	pfam09723, Zn-ribbon_8, Zinc ribbon domain. This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.	1.6709e-17
NZ_CP036353.1\|WP_154901826.1\|6300475_6301648_-\|ammonium-transporter	gnl\|CDD\|274697	TIGR03644, marine_trans_1, probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.	2.44641e-134
NZ_CP036353.1\|WP_154901066.1\|6296097_6297921_+\|Trk-family-potassium-uptake-protein	gnl\|CDD\|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	3.40645e-78
NZ_CP036353.1\|WP_002647162.1\|6304456_6304747_+\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	4.18596e-43
NZ_CP036353.1\|WP_002647166.1\|6297997_6298687_+\|TrkA-family-potassium-uptake-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	4.81036e-41
NZ_CP036353.1\|WP_002647168.1\|6294603_6296010_-\|HD-domain-containing-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	6.2928e-54
NZ_CP036353.1\|WP_002647155.1\|6310166_6310799_+\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	6.72864e-73
NZ_CP036353.1\|WP_154901068.1\|6309088_6310177_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	7.29124e-07
NZ_CP036353.1\|WP_002647160.1\|6306708_6307839_+\|molecular-chaperone-DnaJ	gnl\|CDD\|236757	PRK10767, PRK10767, chaperone protein DnaJ; Provisional.	1.61226e-174
NZ_CP036353.1\|WP_154901069.1\|6310942_6312274_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.03538e-32
NZ_CP036353.1\|WP_044238489.1\|6308895_6309102_+\|DNA-gyrase-inhibitor-YacG	gnl\|CDD\|367713	pfam03884, YacG, DNA gyrase inhibitor YacG. YacG inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. It acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase. YacG has been shown to bind zinc and contains the structural motifs typical of zinc-binding proteins. The conserved four cysteine motif in this protein (-C-X(2)-C-X(15)-C-X(3)-C-) is not found in other zinc-binding proteins with known structures.	3.1107e-09
NZ_CP036353.1\|WP_002647161.1\|6304907_6306527_+\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP036353.1\|WP_154901063.1\|6291197_6291881_-\|hypothetical-protein	gnl\|CDD\|239946	cd04502, SGNH_hydrolase_like_7, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	1.62689e-75
NZ_CP036353.1\|WP_002647165.1\|6298714_6300202_-\|glycerol-kinase-GlpK	gnl\|CDD\|198361	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases. This subgroup is composed of mostly bacterial and archaeal glycerol kinases (GK), including the well characterized proteins from Escherichia coli (EcGK), Thermococcus kodakaraensis (TkGK), and Enterococcus casseliflavus (EnGK). GKs contain two large domains separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The high affinity ATP binding site of EcGK is created only by a substrate-induced conformational change, which is initiated by protein-protein interactions through complex formation with enzyme IIAGlc (also known as IIIGlc), the glucose-specific phosphocarrier protein of the phosphotransferase system (PTS). EcGK exists in a dimer-tetramer equilibrium. IIAGlc binds to both EcGK dimer and tetramer, and inhibits the uptake and subsequent metabolism of glycerol and maltose. Another well-known allosteric regulator of EcGK is fructose 1,6-bisphosphate (FBP), which binds to the EcGK tetramer and plays an essential role in the stabilization of the inactive tetrameric form. EcGK requires Mg2+ for its enzymatic activity. Members in this subgroup belong to the FGGY family of carbohydrate kinases.	0

>NZ_CP036353.1|WP_154901826.1|6300475_6301648_-|ammonium-transporter
MLFLCAVLVLFMQSGFAMVESGFNSSKNTINILFKNLMDVCVGVLVYYAVGYGLMYPGVGDTEGANQWFAFGQFGIGEGGEVGPGVLNPQVDFLFQVAFAATAATIVSGAVAGRLKFSSYLIYSVILTGLIYPISGYWHWGHGWLYDLGFYDFAGSIIVHAVGGFAGLAGAIVLGPRIGRFKDGKSVPIPGHNIAQATLGVFILWVGWYGFNPGSQLAFAGSANTNAVMLIATNTTLAAATGGVAAMILGWVMYGKPDISMALNGVLAGLVGITANCDSVTNLEAIAIGGIAGLLVVFGILALEKLKIDDPVGAFPVHGLCGVWGGLATGIFGGYDLGVQALGSVVIPVYAFVTMFILFTVLKVIGQLRVSEEDELKGLDLSEHGMQAYH
>NZ_CP036353.1|WP_002647165.1|6298714_6300202_-|glycerol-kinase-GlpK
MAKYVLALDQGTTSSRSILFNHQGKIEATAQQEFEQIFPSPGLVEHDPDAIWDSQLSTAQRVIEQSGVSLSEIAAIGITNQRETIVLWDRNTGKPVSNAIVWQSRLTAKRCDQLKAEGYEKLFREKTGLVLDAYFSGTKIEYLLNEIEGLREKAAKGEVLFGTIDSFLIWRLTGGEVHVTDPTNACRTLLYNIHTHDWDDELLQVFDIPRSMLPEVKSSSEVYGETAPELFGASIKIAGIAGDQQAATFGQGCFETGSAKNTYGTGCFMLMNTGDKPVPSTTGLLTTIGWSINGKVTYCLEGSVFIAGAAIQWLRDGLQIIQSSEEVEGLASQVEDSGDVFFVPAFVGLGAPYWNQNARGTLIGLTRGSTKAHVARAVLESLAYQSCDVLHAMEEDSGIKLKNLKVDGGAAANQLLMQFQADMLDVPAQRPVVHETTALGAAYLAGLAVGFWHDQNEVTKNWALDVEFQPAMDEQRRTHLYQRWKKAIERSRDWV
>NZ_CP036353.1|WP_002647166.1|6297997_6298687_+|TrkA-family-potassium-uptake-protein
MIKVAVIGLGRFGTELAKRLGASQVEVIAIDNSDKLVNEVKDDVAIAVRLNATDELALKSQDIDKVDACVISIGENFEAALLTTVILKKLGVPKIICRAQTKFHAEIFTQVGATDVIQPEVQAGAHLARLLANPHLEDYIQVGDGYTMIELITPKEFIGKNLTELSLRSTYSVNVVAIRKRNSPEVEEKTGKLYTTDCVPHPDYQIQESDILLIIGTDQNLLRLPTSNT
>NZ_CP036353.1|WP_154901066.1|6296097_6297921_+|Trk-family-potassium-uptake-protein
MTLSHLPSRIQFQTHHPRRCRLLRRYEILALLVALIATVILHGLLKITTIVHWELGVIIFAAMLYFTLSLGFRYIWHLSRKEFLRKHAVYVFLSGFWTSSVALIVIFQDLLPDSAPDRLLLILGASEFCVILRSLYESILLIRRVSSRGWNPALIVVSSFLVLISVGTILLMFPSARVQDPTSVNTEGAPFLTALFTSTSASCVTGLIIVPTGTYWSRTGQTIIMFLFQIGGLGILTFGAFFAAAFGRSMQIRESVTFGEMLESHQRGDMRRLLLAILGITIFTELAGAVCLSGLWPEHPWQERIFFSLFHSISAYCNAGFSLMDDNLLGMGHHWQVWGVMPALIIIGGLGFAVNYNFMLYGITHFSNLTVRKPLFHHPTQKVRLTISSRLVFFTTLFLLLGGTIGIYFLESIHGNHEIPFWERLNQAWFQSVTMRTAGFNTVDLGEFQPQSKLFSVLLMFVGASPGSTGGGVKTTVFALSILSVWALLKGRDRVEIMGRTIPPTLIHRSLTIISLGILVLMTSTLLVVLFENRQDIFLDHLFETTSAFATVGVSTGITAKLTTPSHWVIIFTMLIGRVGPLTALIALSNRGPSYRYRYPDESVNLG
>NZ_CP036353.1|WP_002647168.1|6294603_6296010_-|HD-domain-containing-protein
MVRDFISESLAHDPIHGYIPFTSRTGMPDEENSEQEIIDHPWVQRLRHIHQLQTAWWVFPSAEHMRFQHVLGAMHLASVAIHAWYDSLNSACRNVPSLPYVESLVRLAALLHDVGHGPFGHFFDDHYLDQYGLTHEDIGAHIIEHELGDLIRGIRRNPNGRLKPLEELDPKQVGWLICRPSGDQQSEAGNPDWLCKLRAMFSGIYTVDNMDFVLRDAYMSGYNIRAVDVSRLIHYSFFTAEGLTIHGRGLQALVNFIETRANLFRTIYYHRTVRALDLALEEIFAETMQHLFHGNPLEHLDEYLGFTESSFLVDVGRFKKSSDPAVQDLGERWQGILSRNVEWKMACERSLNFHSGTAVHTSIFSEPELVEKRVRAKLPAKLKQIPLRIDVARHYHRPSGRLPAGGQNFLLDQGTEKTQELHDDELFRALPVSFLIFRIYTRDHLHDFEMTNALNAALGEVSDSKTNM
>NZ_CP036353.1|WP_154901065.1|6294011_6294302_-|hypothetical-protein
MQVQVKEQDPESDGWIIRQNEVDGVVVEHLPRIHGKLIAFDLLKFQIAGRDSGVFYKVTTAGNKMLPRLEKKLRKLLSAQNAEQAEPFEQDYAKSA
>NZ_CP036353.1|WP_154901064.1|6293192_6293645_-|hypothetical-protein
MQQRTRTGLQQRTRSGLQQRTFLGLQQRTRSGLQHFTRSGLQQRLRKPNASASETLKEAAISVRTATKESVTVFRIMVYSSDSINKSGSTSLKDESLLHPPAMSPSLRTWGKQVCFSGLVRFAGYGKYADYNTRTKCDVKVKTTLKIKFL
>NZ_CP036353.1|WP_154901825.1|6291921_6292710_-|dihydropteroate-synthase
MGILNVTPDSFSDGGEATEVESAVRKGLQLVQDGADILDIGGESTRPGADPVPLDEELRRVVPVIEALSAQTKTPISIDTTKAEVARQALQAGAVIINDISGLTFDSAMVPLAAESKAGVICMHIQGTPQTMQENPVYDDVVADLKSWFQMRVQALLEAGVEPERIVLDPGVGFGKTADHNLQILSQISSFQELGFPVLIGHSRKRFLSKLLGRSLEERLAGTIGVSVALANQGVEILRLHDIAANRDAIAAWQAVTSRGTT
>NZ_CP036353.1|WP_154901063.1|6291197_6291881_-|hypothetical-protein
MNLNLFSRTMALALLTLLTVSTHAAEKTEHNFERWEKSISQFEKQDQDQGIKKGGNLFVGSSSIRMWDLDKYFPEQHVLNRGFGGSEIVDSTHFADRIIIKHEPEVIFLYAGDNDLARKKTAEEVAKDFKKFVAKVHKSLPETRIVFIAIKPSLSRWKLADTIQQANKLIAAQCAKNDLLEFADVWEPMLDEDGKPRPELFKSDGLHMEHPGYLIWKKAVQPYMVQK
>NZ_CP036353.1|WP_154901062.1|6290207_6291170_+|carbohydrate-kinase-family-protein
MSSPSYDCLCAGIIVADHVCQAIDHLPRPGELVLTDQMELTIGGCASNVASDLARLDRQVAIAGIVGQDVFGRYVEERLMQSGVHCDYLMKSEELPTSGSFVINVQGEDRRFIHSVAANALFTGETVTHEQIESSRILYLGGYCLSEELSPENVAEMFRMAKEAGVTTVLDVVTPKPADYWKMLEPVLPLSDYFLPNNDEGELITGEADPLAQARAFRKAGAKNVIITCGGEGSILMNAEQTFQSEIYPVNLVDGTGSGDAFVAGFIHGLLEGASPEECLKFGSALGHSCVRATGATAGIFTRGELHDFVGAHDLQVRTI
>NZ_CP036353.1|WP_002647162.1|6304456_6304747_+|co-chaperone-GroES
MELNPLDDRIVIEPNVAEETTAGGIVLPDTAQEKPQSGTVIAVGPGRLLESGERCPVAVEVGDEVLYGKYGGTDIEVSGKDVKILRESDILAKIIK
>NZ_CP036353.1|WP_002647161.1|6304907_6306527_+|chaperonin-GroEL
MAKQLLFEDRARAKLQKGVQTISDAVAITMGPTGRNVIIDKNFGNPLVTKDGVTVSKEVELEDPFENMGAKLVNEVATKTSDVAGDGTTTATVLARSIYQEGLRGLSLGANPMIVRRGIDKAVEAAVSAIEALAKPVTEKAEIAQVGAISANNDSVIGNLIADAVEKVGRDGVITVEEGKGNETTLSFADGMQFDKGYISPYFVTDTEGMKCILEDCYILIHESKISALRDLVPLLEKVSQTGKPLLIIAEDVEGEPLTALVVNKLRGVLNIAAVKAPGFGDRRKAMLADIAVLTGGTVISEDLGIKLESVELAQLGQAKQIEITKDSCTLIEGAGKTDALQARVAQIRGQLQKTESEYDREKYQERLAKLTGGVAIISVGAATEAEMKQTKARMEDALHATRAAVEEGILPGGGVALLRSIEAVEKVKGKNDDEKIGISIVARALEGPIRQIAENCGTDGAVVADEVKQLTGSKGYNANSGEYVDMFKAGIIDPAKVVKNALKNAASIAGLMLTTQVLVTRSDSTEGNKLADVEGSVR
>NZ_CP036353.1|WP_002647160.1|6306708_6307839_+|molecular-chaperone-DnaJ
MASKRDYYEILGVSREVTTVEIKKAYKKLALANHPDRNPGDEEAIKRFKEAAEAFEVLGDDKKRAHYDRYGHADFGAGASQFHDVSDIFSAFGDLFEGFGFRNSSQRGGNRPRQGESLRTSLQIDLLDAAAGCDREIHINRQETCDTCHGTGARPGTEPDECDYCGGAGQVVQSQGFFRVQTTCPRCRGAGKVIVEKCSDCRGEGRIAQETTLEIKVPAGIDNGMQLCLRGEGNPGANGGPRGDLYVVIGVDEHPLFRRQEQELSCHVPITYTQAALGANIEIPTLEGRHDLKVPSGTQPGEVFRLKGLGMPNPHGGRRGDLHVVVQIDVPKKISEREEELLRELAEIEHAEVSSHRSPNRNSFFDKLKEYFTHSD
>NZ_CP036353.1|WP_002647159.1|6307933_6308482_+|nucleotide-exchange-factor-GrpE
MEQPEEIQNQTEEIPVEESEVTDEAPTVEEQLQSAISERDENQDRFLRSQAELDNVRKRHQKEMELLRQYAAAPFIQDLLPALDNLKRAVDAAESADQVGDLKQGVEMVAKQLLDVLSKHNVTPIDALGKPFDPNLHEALQQMPSDEHPPMTVIQELEQGFILNDRVVRPTKVIVSSGPAEG
>NZ_CP036353.1|WP_002647158.1|6308519_6308816_+|FmdB-family-transcriptional-regulator
MPTYDYECSQCGHKWEEFQSITAKPLRKCPECGKLKAKRVIGAGGGIIFKGSGFYQTDYRSSSYKKDAAADTKTQSPSSDSKSSGDSGSSSKSGSADS
>NZ_CP036353.1|WP_044238489.1|6308895_6309102_+|DNA-gyrase-inhibitor-YacG
MIQPQTCPICRKVVTFQASDDQSPFPFCSQKCRDVDFFRWSDGRYAIVEELDPRIIELQQLEQEGEDD
>NZ_CP036353.1|WP_154901068.1|6309088_6310177_+|DMT-family-transporter
MKTIKETSSDAPALPESSESELTGGLSPTVKGTLYGLLSALAYTAANIALREAAVDNNADWAIWISALKSVPATIVGWALVAYRGSQGLPALPPRRLVLPLILTGLVMQFGGNVMFQWSLSLGGLAFTVPLCFATLLTTGALLGRIFLEEAITPRMFASMIILTAAIVILSLGAHQAEVSVFENMEHHSSSMATVALTIFVAGFAGCSYGAGGAVIRGSVRGETSISATLVLISTTGLICLTGVAVYRLGISIFWITTPWQYLVMLVGGIMNAIAFFAIGASMKYLTVTRVNLLNASQTAMAAFAGVLCFGEQLTVWLLCGTALTISGLFLMEKKRATIPNSSLTQTTGISTQQEKGPSDES
>NZ_CP036353.1|WP_002647155.1|6310166_6310799_+|gamma-carbonic-anhydrase-family-protein
MNHDSASPDWPHRQAEIPAPPEFPYPEVDCDWQALHSSPIIDPTAWVTPDAIVTGRVRLKARSTVWHQCVLRGDLEYIEVGEETNVQDGSILHTDYQHPCILGDRVTLGHAAIVHGSIVEDDAMIAIGATVLSRCVIGKGALIAAGALVREGIHVPPGTLWAGCPARQIKVLTDQQQERLKATWQHYVNLGAASLQRFGRDHIDALITEI
>NZ_CP036353.1|WP_154901069.1|6310942_6312274_+|Gfo/Idh/MocA-family-oxidoreductase
MNTDRPQSSPSTTRREFIKNGTAAVAAASSLSSVAFAGSAPLTALQSSLFAGGSDVIRVGLVGCGGRGTGAAAQALAADPNAKLVAMGDTFYDHLDKSFQNLKKNPVAEQVQVDTDHKFVGFDSYQKVIDCVDVVLLTTPPHFRPMQLRAAIEAGKHVFAEKPVAVDAPGVRSVLETCKLAKQKNLSIVSGLCWRYHEGMRETFKQIHDGAVGDVMTIQCSYNTRGLWMFERQPEWSDMEWQMRNWLYFTWLSGDFNTEQHVHSLDKMAWTMKDQTPLACSGTGGRQTRTGKEYGNVFDHFAIVYEYPNGVKGFSRCRQQDGCAVDVSDHVFGTKGRVDVFKHRIYDPKGEKTWDFRGKSKNMYQVEHDEFFASIRSGEPINNGDYMTKSTMLAIMGRMAAYTGKSITWDEAMNSKEDLTPASYEWGPIPVPPVAMPGITAFK
>NZ_CP036353.1|WP_052301257.1|6312626_6313331_+|hypothetical-protein
MRMSRLFSTGAALLAISATTLVSAQPPEGKDRPERGDRPEGRERGDRDRGPREGGPRDGRGGPGGRPNFMLMLPIFITLDVNKDGELSKEEIENATVALQKLDKDKNGKLTEDELRPDFGGFGRRDGDRRGPGGPGAFGRGEGGRGGRGGDFVERMMANDKNKDGKLTKEELPERMQSMFDRVDANKDKEIDKAELTKMAEQFNSRNRSGGRDRGERGGRNSDGDRPKRPESDN

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Crispr_ID: NZ_CP036353_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036353_3

6697559-6697746

Orphan

Consensus_repeat	Method
GGCAGCGACAGCGATGTCAAACT	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP036353_3

>merge|NZ_CP036353|3|6697559-6697746|CRISPRCasFinder
GGCAGCGACAGCGATGTCAAACTGGTGGAAGGTGACTCAGAACCAGACTTTGAAATACTGGATCTGGAATCTGGCAGTGACAGCGATGTCAAACTCGTCGCCGACGATTCCAGCCCGATGGGCAGCGAAAGTGACGTCGCTCTGATTGGAGAAGACTTCGACCTGGGCAGCGACAGTGATGTGGCGCT

>NZ_CP036353|3|3|6697559-6697746|CRISPRCasFinder
GGCAGCGACAGCGATGTCAAACT	GGTGGAAGGTGACTCAGAACCAGACTTTGAAATACTGGATCTGGAATCT
GGCAGTGACAGCGATGTCAAACT	CGTCGCCGACGATTCCAGCCCGATG
GGCAGCGAAAGTGACGTCGCTCT	GATTGGAGAAGACTTCGACCTG
GGCAGCGACAGTGATGTGGCGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036353.1\|WP_154901214.1\|6684696_6686925_-\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|224054
NZ_CP036353.1\|WP_044239974.1\|6705315_6705741_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378467
NZ_CP036353.1\|WP_081459608.1\|6688611_6689208_+\|type-II-secretion-system-protein	unknown	unknown	gnl\|CDD\|225076
NZ_CP036353.1\|WP_154901222.1\|6707610_6708432_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP036353.1\|WP_154901216.1\|6692878_6693862_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP036353.1\|WP_154901218.1\|6699946_6700771_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|316372
NZ_CP036353.1\|WP_002648907.1\|6690631_6691255_-\|MarC-family-protein	unknown	unknown	gnl\|CDD\|225006
NZ_CP036353.1\|WP_154901215.1\|6691288_6692686_-\|sulfatase	unknown	unknown	gnl\|CDD\|293763
NZ_CP036353.1\|WP_002648904.1\|6693878_6695114_-\|DUF2088-domain-containing-protein	unknown	unknown	gnl\|CDD\|370728
NZ_CP036353.1\|WP_002648902.1\|6696066_6696621_+\|phage-shock-protein-A	unknown	unknown	gnl\|CDD\|274372
NZ_CP036353.1\|WP_154901217.1\|6695354_6695942_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|183566
NZ_CP036353.1\|WP_002648897.1\|6701211_6701739_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274379
NZ_CP036353.1\|WP_149303886.1\|6705841_6707185_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036353.1\|WP_154901219.1\|6701738_6703106_+\|FecR-domain-containing-protein	unknown	unknown	gnl\|CDD\|377406
NZ_CP036353.1\|WP_154901221.1\|6704126_6705125_+\|DUF1559-domain-containing-protein	unknown	unknown	gnl\|CDD\|284919
NZ_CP036353.1\|WP_002648899.1\|6698805_6699864_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036353.1\|WP_002648908.1\|6689698_6690535_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP036353.1\|WP_154901220.1\|6703228_6704092_+\|DUF1559-domain-containing-protein	unknown	unknown	gnl\|CDD\|284919
NZ_CP036353.1\|WP_081459609.1\|6686930_6688055_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP036353.1\|WP_052301285.1\|6708931_6709246_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237855

Protein	Function_ID	Function_description	E-value
NZ_CP036353.1\|WP_154901214.1\|6684696_6686925_-\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.62416e-92
NZ_CP036353.1\|WP_044239974.1\|6705315_6705741_+\|hypothetical-protein	gnl\|CDD\|378467	pfam10670, DUF4198, Domain of unknown function (DUF4198). This family was previously missannotated in Pfam as NikM.	0.00195589
NZ_CP036353.1\|WP_081459608.1\|6688611_6689208_+\|type-II-secretion-system-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	6.60497e-09
NZ_CP036353.1\|WP_154901217.1\|6695354_6695942_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|183566	PRK12513, PRK12513, RNA polymerase sigma factor; Provisional.	1.19447e-41
NZ_CP036353.1\|WP_154901222.1\|6707610_6708432_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	5.64786e-33
NZ_CP036353.1\|WP_154901216.1\|6692878_6693862_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.30359e-37
NZ_CP036353.1\|WP_154901220.1\|6703228_6704092_+\|DUF1559-domain-containing-protein	gnl\|CDD\|284919	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559). A large family of paralogous proteins apparently unique to planctomycetes.	2.9773e-53
NZ_CP036353.1\|WP_002648907.1\|6690631_6691255_-\|MarC-family-protein	gnl\|CDD\|225006	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion].	3.43219e-42
NZ_CP036353.1\|WP_154901215.1\|6691288_6692686_-\|sulfatase	gnl\|CDD\|293763	cd16144, ARS_like, uncharacterized arylsulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	0
NZ_CP036353.1\|WP_002648904.1\|6693878_6695114_-\|DUF2088-domain-containing-protein	gnl\|CDD\|370728	pfam09861, DUF2088, Domain of unknown function (DUF2088). This domain, found in various hypothetical prokaryotic proteins, has no known function.	3.60948e-17
NZ_CP036353.1\|WP_002648902.1\|6696066_6696621_+\|phage-shock-protein-A	gnl\|CDD\|274372	TIGR02977, phage_shock_protein_A, phage shock protein A. Members of this family are the phage shock protein PspA, from the phage shock operon. This is a narrower family than the set of PspA and its homologs, sometimes several in a genome, as described by pfam04012. PspA appears to maintain the protonmotive force under stress conditions that include overexpression of certain phage secretins, heat shock, ethanol, and protein export defects. [Cellular processes, Adaptations to atypical conditions].	9.48908e-18
NZ_CP036353.1\|WP_154901218.1\|6699946_6700771_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|316372	pfam13847, Methyltransf_31, Methyltransferase domain. This family appears to have methyltransferase activity.	8.21937e-27
NZ_CP036353.1\|WP_002648897.1\|6701211_6701739_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274379	TIGR02989, Sig-70_gvs1, RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are abundantly found in the species Rhodopirellula baltica (11), and Verrucomicrobium spinosum (16) and to a lesser extent in Gemmata obscuriglobus (2).	5.2172e-35
NZ_CP036353.1\|WP_154901219.1\|6701738_6703106_+\|FecR-domain-containing-protein	gnl\|CDD\|377406	pfam04773, FecR, FecR protein. FecR is involved in regulation of iron dicitrate transport. In the absence of citrate FecR inactivates FecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm.	8.66734e-09
NZ_CP036353.1\|WP_154901221.1\|6704126_6705125_+\|DUF1559-domain-containing-protein	gnl\|CDD\|284919	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559). A large family of paralogous proteins apparently unique to planctomycetes.	2.63571e-60
NZ_CP036353.1\|WP_002648908.1\|6689698_6690535_+\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	5.95128e-29
NZ_CP036353.1\|WP_081459609.1\|6686930_6688055_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	1.05853e-51
NZ_CP036353.1\|WP_052301285.1\|6708931_6709246_+\|hypothetical-protein	gnl\|CDD\|237855	PRK14900, valS, valyl-tRNA synthetase; Provisional.	1.39632e-08

>NZ_CP036353.1|WP_002648902.1|6696066_6696621_+|phage-shock-protein-A
MSYFSRLTDIVTCNLTHLLNNAEDPVKEIEQIISEMKEGIAGANRSVKTASANEQAIQQELADYESQIFQWKEAAKNALGMGDETEARNSLVRKQEVEDLKAGLEQQHRAAVATCEHLTTTLHALEARLAEARRKQVELTEQTGLSETSAQSTSNTTDAESSLNPSRSEQIDSELAELKRELGQ
>NZ_CP036353.1|WP_154901217.1|6695354_6695942_+|sigma-70-family-RNA-polymerase-sigma-factor
MTEDDQLMIRIQSGELRAFDELVEKYQGPLIGFFFRNTRDSQISEDLSQETLLRVYNQSWDYLPQGRFRGWMYRVARNLMIDNIRRQSHDALIKAYTGKQADEDDSLNRLASEVVSPEEKANVKELALIVDELLATIPEDQRLTFTLHHYSELTLNEVAEVMETNLATAKSRLRLAREKLREKLTLMGVTDPQKN
>NZ_CP036353.1|WP_002648904.1|6693878_6695114_-|DUF2088-domain-containing-protein
MTETVNIELNYGFNGTFQCEIPSERLIHYHQAPAGIDDVAARMKQVLNSPLELPPLDLAVVPGDKITIAVDYQAPAAAEVINSVWDYFSDCGIEAGDVTILQTSSESSMLQEKLKAAVNSELQEQASWVIHAPDSKEEVGYLGTSAGGERIYLSRHLLEADFILPIEKVGFDPLIGYAGGGSSIYPGFSSQEAIIKSRGQSHRELTPAESRPLRQLIDEIGWMLGLQYSLQVIPAGGQSVSEIVFGSLEATFRKAKQLLDEYWKLEPEYKSEMIVIAVEDGPTGHQWNQLGSVLETARNLVAQDGRIVLLTQIDSALGEGLQILSRCHEPLDAIKPLRDSQPGDLLAATQMALTGDWALICLLSKVSSDEVEDLFVIPLEDEAEVQRLLQTDETVSVIASAQYAYGQLKQG
>NZ_CP036353.1|WP_154901216.1|6692878_6693862_+|Gfo/Idh/MocA-family-oxidoreductase
MKKIKVGQIGVGHPHAGGKMQAFRKSEEYEVVGVVEPDEKLRAYAASTGIYKDLPFLTQEQLLNIDGLQAVAVETQVADLLPTAETCIAAGKHIHLDKPAGLSLPHFKRILDQAAQKHLLLQMGYMYRYNPGVVLLRDLLQKGWLGEPFEVHTVISKKMDAASRKQLEPQPGGMMFELACHVIDLVVEILGRPDQVTAFAQHASDIDDTLQDNMLAVFSYPRALATVKTSCNEVQGFDRRHIVVCGSEGTFHLQPFGRPSASLTLAQAKGKYRKGQQEISFSGYTRYQDDVADMAKIIRREKDIDFSYQHDYDVQETVLKSASLPVT
>NZ_CP036353.1|WP_154901215.1|6691288_6692686_-|sulfatase
MLRTLVVALLFCCHLSMLSQASAENQRPNIVLFFIDDLGWRDVGFMGSDFFETPHIDRLAEESMKFTAAYSAAPNCAPSRACLMSGLYTPRHGVYTVGDPARGNDRYRKLIPAENNRVLDDRFTTIADRLSQAGYRCASVGKWHLGQSPLSQGFQVNIAGNQTGSPRGGYFSPYQNPQLSDGEQGEFLTDRLTTAACQFIKDNQGSPFFLYLTHYAVHTPLQAKKEDIAYFQSKPAGKLHQHATYAAMIRSMDQSIGRVLQTLREQQLDQNTIVVFTSDNGGYGPATSMLPLRGSKGMLYEGGIRVPLLIKWPGVTQPGSTTGEAVINVDLYPTFLEMTNIPVLESELLDGESLVPLLKDPQTRLESRSLFWHFPAYLQKYQGMQQRFRTTPVSVIRQGDWKLLEFFEDGHQELYNTRLDIGESKELSGSHPEKTQELSQALHRWQKQVKAAIPAELNPEYKPED
>NZ_CP036353.1|WP_002648907.1|6690631_6691255_-|MarC-family-protein
MEWDDIFRDFVYLWAVIDPIGSIPVFIAVTAGTSRMVQRKIAYQAIITAGLVLLLFIVGGQIMLDLLEIPLAAFQIAGGLVLFLFALTMIFGDSKPETEIEESTHINAHQNKAVFPLAIPSIASPGAMMAVVLITDNHRFHIGQQLISTLTMMTVLLITLGFLLLAGRIQKLIGDAGASVVSRIGGLILASVAVDSVLSGIKTYFGI
>NZ_CP036353.1|WP_002648908.1|6689698_6690535_+|OmpA-family-protein
MPILVRVCLLTAVSLFTISQSACQRGPNAQLRQSMYRSQQLYDQNSELAMQRDQFQQSANALQHERDQLAMRAQSLESNLNIANKRLDNLNAERSEMQQRYVSLMKKAKGQPSPLDGEATRRFQELADKYPDFEFDPITGVSKFHSDILFSSGSDNLKPAAQEILNQFAAIMNDGNAKRLNVLVVGHTDDKPISKASTQRQHRTNWHLSTNRANSVVLTLSKFGVKQERMGAAGYSMFQPVVPNQNDSARQKNRRVEIFVLAPDAVVAGWDPNPTLLN
>NZ_CP036353.1|WP_081459608.1|6688611_6689208_+|type-II-secretion-system-protein
MVSHLPSRRRGMRRGFTLIELMVAIATIAVLIALLLPEIQKAKDASLKSSQKDGPYWVYREYEYAGGPVISEISGTYKHSLQEILDMYAINLKKQQKQNELELEQIAQLEQMTDEDAVAIALKPVEPKTQRVPSWHKRHTDLGAQEISRKEKIAKTKRALKNFKFDLSQNTASLVARRNLVEAIEELKHDLKQLESQD
>NZ_CP036353.1|WP_081459609.1|6686930_6688055_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MKKIAGLLVVGVVLIVSLVFSQNRHVPLRVSGFIEADDIRPGSRVGGRVKQVLIEEGQSVSQGDLLIELEPYDLLERRAEAIAGLAEVKAQHAELVAGFRTEEIDEAAAKVDQLKARLTLLINGPRQQEIDSAVAELHLADAEYRLAKAKQMRVETLFGQKSASTDELDTANTELQVAASRKEVKQKSLDLLKEGTRKEEIDEARAQLKQAEAALQLLRNGSRKEDIEQAAASVRKAEAFLQTIEDQIKELKIVAPLDGTIEAVTLQPGDLVGSNVPVVSILDWNALWVRCYVPENHLDIQVDQEVEVTIDSYPDKTFKGRVSFVSRQAEFVPRNVQTPEERSKQVFRIKVRITDKDKLLRPGMAADVWLHGKD
>NZ_CP036353.1|WP_154901214.1|6684696_6686925_-|ABC-transporter-ATP-binding-protein/permease
MTTVIKVDQLSREFGSLKAVDQVSFTVQRGAIFGLLGPNGSGKSTIIRMLCGVLEPTGGSAQVLGYDIVDDAEMIKRHIGYMSQSFSLYADLSVRENIEFYGRIYGLSPEKLEQRFQEIIELTSLQDRLDQLAGNLSGGWKQRLALGCALIHEPQVVFLDEPTAGIDPVARRDLWDLLFQLAGQGVTLFVTTHYMDEAERCSDVGYIYNSRLIVCGKPNELKQLPTVTPDGTARWEIETANPATLLTTFREMPGVRDATLFGQTIHVLADQSLCENDFTRQVPHEFGTVQVRHITPSLEDVFVTLSRAEELNHQGAAVPTTVTASQQRSEGEPLDHREQVALPAQTQSVKRPAAEQVTPGILAGFWAILVKEFSHVRREPSTLLFVFAVPVLQTLIFGFAIDTEIENIPTVIFNLDGRASSRELQDGFANTRTFRIVEHVYNHEDFRNAFESGRAKVGVTIPPDYSDRLLKGEQVSVQVLIDGSDSQVATTALNASNLLGFNLSTSMTRSFAENLNVVPARDADGQPALPVEIRPRLLYNPDLDSSYFFVPGLVGIILQLVTLFLTSFAIVRERELGTLEQLFVTPVSKSGLLLGKLAPYALIGFVETLIVLTLMVYFFGVPIHGNLWELLLLSLLFLVCGLGLGMLVSTIARTQLQAIQFAFLIMLPSVLLSGFMFPRSQMPLPIYLVTFIIPVTYFLEILRGIVLRGANLTDLLPYVLGLSLCCIAIIGFSLKRFQKQLS
>NZ_CP036353.1|WP_002648899.1|6698805_6699864_+|hypothetical-protein
MYQKSLCLLVLLALVISSPLQAAERTLRYRDRKPQEYKLTARASKIDPRTKEHPEIDYVFEAKGKPQDVEHAVVDTRVKPRGKLVIWLMGYNSQLFDRLSSYGLHAIQVHYANRWFSKVCRENPVGETCRGNVRLEAATGEDYSDQVSIPHPDGMKERALQFVKWLAKENPQGQWNYYLTPDGKDLRWEDVIMAGSSHGSTTAARFAKHQKVSRVVMFCGPRDQLQNWQMLPSATPTNRYFGFSHVLDGGWTADHYCRSWELIGLNEFGPIVNVDKAKPPYGNTRRLITDFDVKNNTRRAHSSVVPGGNAGKNAQGQYIHEAVWRYLFTEPVDKVGKPVPLDPGCEKNQRDS
>NZ_CP036353.1|WP_154901218.1|6699946_6700771_-|class-I-SAM-dependent-methyltransferase
MRELMNRKTQYVIRGGVEGRERLRVLGRVMAESTGTLLDQVNLTEGMTCLDVGCGGGDVTCELARRVAPVGRVVGVDIDETKLSIARQEAAEQGLTNIEFRLSDASEISATPEFDLVYSRFLLTHLKDPVSAVRSFLKQLRPTGFLVVEDIDFSGSFNYPESPAFQKFFDLYNTVVRHRGGDPNIGQRLPGILHDCGIQNLKVSVVQPTGLQGEVKQLNGLTMENIADAILEDDLATPGEIDEIVRELYDYAADPRTLSGVPRVIQVWGRLPFA
>NZ_CP036353.1|WP_002648897.1|6701211_6701739_+|sigma-70-family-RNA-polymerase-sigma-factor
MNEVILNNEFFQQLLKHQGQLHAYVLSLVGNTSDAHDLLQDVNQCLLEKQSSFTLGTNFLAWSRKVAFFKIQSYWRDQSRNRMLFDDELLNSMSETIECMPDLYNEQIEALKTCITHLPSDKQILMQQRYGQFLPLKQIAEYWGKSEKAIGVMLLRVRLRLQDCIQKSIAARSRI
>NZ_CP036353.1|WP_154901219.1|6701738_6703106_+|FecR-domain-containing-protein
MIRENSTSWEDPLPKLVALYFDNQLNERELKQLQTRLKSDPEARIFFVQFSALQTQLEWIHTDSSSPQEMTHLPGSIYSRKKNWNLILYVTCCVCLVLGGLFSMHLMTPVAHVFPEPGSVWSSGNITTEEKLLPGSRRHLLRGAIEIRFTSGSIVNLKAPAQFTVHNSNEIFLQAGKLVADVPESGHGFTVETQTGKIIDLGTSFSVNVGAELNTEIKVYRGKVQVAGSKETEPPREIRANEAVQIDPVSNLIQPGDYTSSDFIPLISRDYAVDQFSDNVIFQEQLPDQIAQGEFQVLERDGAIFLFPEKRDILLSENLPVSITQPGDYRAEEQIETETDFVSRGMKVDCYRIYYDPASNHRDMIRAEGVVHFHQPILGLITTKTRLLETDSVLNPLCAGGNCPPIQHQEVEARVAEDGTHQDILSLSEDRKTLKFILHTGTKYVDEFRVLVASP
>NZ_CP036353.1|WP_154901220.1|6703228_6704092_+|DUF1559-domain-containing-protein
MQIPRPAKRLRGFTLIELLVVIAIIAILIALLLPAVQQAREAARRSQCKNNLKQIGLALHNYHDTHRVFPSGVVSSNNLAWSTMVLPFIDQAPLYNHISTATDSFAEPWEDANYDGTLDDPIDEANTVIPALLCPSDTTGGRNSKIGNYGTSNYIVAHTASNAGETADVLASFYENSSRRMRDYTDGLSNTVQVVERTGQGTYKGSIWIGRRDGIDVFEIWTRIDRISNDDHYRPNGTIWAATSSLHVGGAHVLMGDGRVRFVSENISIETWAALGTINGGEVIGEF
>NZ_CP036353.1|WP_154901221.1|6704126_6705125_+|DUF1559-domain-containing-protein
MHIHRSTKRIRGFTLIELLVVIAIIAILIALLLPAVQQAREAARRSQCKNNLKQIGLAFQNYHDTFNMFPPGYVDERGSGGTLADNEGHWAWSTMILPYLDQAPLYNQMNPGPITPSTALNDAAIRTSMQQPLAAFRCPSDTGPALNGNAGQEIQADSGTNYGLPVSNYIASNNNRTLRQSRSSNGANGGSGATGAFWRDSNLRFRDITDGASNTILVGERSYKVGTVDFYAGTLYAAREFGGTNGPEQASGNQGLIAIFGGSTYSINPTNPSNVATRQAYSSQHTGGAHFGLGDGAVRFISENINLNTDDAVNSTLESLIGVADGQILGEF
>NZ_CP036353.1|WP_044239974.1|6705315_6705741_+|hypothetical-protein
MMLRILSLCLLNCFTCLIMSGCGNAGPELATVTGNVTLDGKPVPDARVDFSPQEGRASVGTTNAEGVYELQYSLEKEGAVIGSHNVKITTERATTGGEGNEPLVPGSKELLPSVYNSNSQLTAEVTSGENVIDFSLQSQPD
>NZ_CP036353.1|WP_149303886.1|6705841_6707185_-|hypothetical-protein
MIMACFGEQAQAGYLGAGRYKCCPTEACTSCGDYCAAKECSSTCYKTVVETVWEKQNYTCQKTVYDTVCEKVPVQYTKNVYKTCYRDECYTVCKPVYQTCYREVCYNVCRPVYKTCYKTVTCKRRRPVYNTCYKDVCYSVCKPVYNTCYRDVCYTVRRPICETHYRDVCCTIYKTNYKTCYRDVCRTICKPVHTWHDVEVCCGEWKTVTEHCPGPVVDKCVCEPGTWEYDCSSCCPIYKPGCCKTVKVQCPGTTICRRVWCPKKVTRKVCCTTYERECKTERVPYTVCERVPCTITKKVPYTCVRYECETRTKKVPYTTCQMVRECRTRKVPYTTCCWKEECVTKQVPYTTCTMVSECRTRKVPYTTCSYEQKTCTRKVPYTTCEQVCCTRYVTRTKCVPRTVCVTKTRCVPRQVCRKVPVPTCCPEPTCTAPAPKTCTAPAPTCSN
>NZ_CP036353.1|WP_154901222.1|6707610_6708432_+|sugar-phosphate-isomerase/epimerase
MKFGICQELFVGWDWEQQCDLIAEIGYTGIELAPFAFAERPSDISAEQRAFLRKTAEDRGLQIFGLHWLLAKTEGLHLTTADAAVRKKTASYLVELGELCADLGGDLMVFGSPFQRNIEEGMTHEQAYANAAEVFRNCLPAIGERGVRICMEPLTTKETDFVNTCAEALELIDMVGADNFVLHQDVKAMLGAETESIPELIHKYDTRTGHFHVNDSNLLGPGMGETDYHPIFKALKESRYDGWISVEVFDYEPGCEHIARESFRYMKEVWESV
>NZ_CP036353.1|WP_052301285.1|6708931_6709246_+|hypothetical-protein
MARSQRQGSPRLTLKGGFAVAKKKAKKAAPKKAAPKKKAAPKKKAAPKKKAAPKKKAVKKKAAPKKKAAPKKAAKKAAPKKKAAAKKKAVKKKAAPKKKAAKKK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP036353_1	1.1\|4385286\|34\|NZ_CP036353\|CRISPRCasFinder	4385286-4385319	34	NZ_CP036353.1	23163-23196	1	0.971
NZ_CP036353_1	1.1\|4385286\|34\|NZ_CP036353\|CRISPRCasFinder	4385286-4385319	34	NZ_CP036353.1	905710-905743	1	0.971
NZ_CP036353_1	1.1\|4385286\|34\|NZ_CP036353\|CRISPRCasFinder	4385286-4385319	34	NZ_CP036353.1	2825996-2826029	1	0.971
NZ_CP036353_1	1.1\|4385286\|34\|NZ_CP036353\|CRISPRCasFinder	4385286-4385319	34	NZ_CP036353.1	3444929-3444962	1	0.971
NZ_CP036353_1	1.1\|4385286\|34\|NZ_CP036353\|CRISPRCasFinder	4385286-4385319	34	NZ_CP036353.1	3653958-3653991	1	0.971
NZ_CP036353_1	1.1\|4385286\|34\|NZ_CP036353\|CRISPRCasFinder	4385286-4385319	34	NZ_CP036353.1	4384961-4384994	1	0.971
NZ_CP036353_1	1.1\|4385286\|34\|NZ_CP036353\|CRISPRCasFinder	4385286-4385319	34	NZ_CP036353.1	6668353-6668386	1	0.971
NZ_CP036353_1	1.1\|4385286\|34\|NZ_CP036353\|CRISPRCasFinder	4385286-4385319	34	NZ_CP036353.1	7334143-7334176	1	0.971

1. spacer 1.1|4385286|34|NZ_CP036353|CRISPRCasFinder matches to position: 23163-23196, mismatch: 1, identity: 0.971

cgaacggttgtgtatcatgtgtccggtcttaata	CRISPR spacer
cgaacggttgtgtatcatgtgtccggtctaaata	Protospacer
***************************** ****

2. spacer 1.1|4385286|34|NZ_CP036353|CRISPRCasFinder matches to position: 905710-905743, mismatch: 1, identity: 0.971

cgaacggttgtgtatcatgtgtccggtcttaata	CRISPR spacer
cgaacggttgtgtatcatgtgtccggtctaaata	Protospacer
***************************** ****

3. spacer 1.1|4385286|34|NZ_CP036353|CRISPRCasFinder matches to position: 2825996-2826029, mismatch: 1, identity: 0.971

cgaacggttgtgtatcatgtgtccggtcttaata	CRISPR spacer
cgaacggttgtgtatcatgtgtccggtctaaata	Protospacer
***************************** ****

4. spacer 1.1|4385286|34|NZ_CP036353|CRISPRCasFinder matches to position: 3444929-3444962, mismatch: 1, identity: 0.971

cgaacggttgtgtatcatgtgtccggtcttaata	CRISPR spacer
cgaacggttgtgtatcatgtgtccggtctaaata	Protospacer
***************************** ****

5. spacer 1.1|4385286|34|NZ_CP036353|CRISPRCasFinder matches to position: 3653958-3653991, mismatch: 1, identity: 0.971

cgaacggttgtgtatcatgtgtccggtcttaata	CRISPR spacer
cgaacggttgtgtatcatgtgtccggtctaaata	Protospacer
***************************** ****

6. spacer 1.1|4385286|34|NZ_CP036353|CRISPRCasFinder matches to position: 4384961-4384994, mismatch: 1, identity: 0.971

cgaacggttgtgtatcatgtgtccggtcttaata	CRISPR spacer
cgaacggttgtgtatcatgtgtccggtctaaata	Protospacer
***************************** ****

7. spacer 1.1|4385286|34|NZ_CP036353|CRISPRCasFinder matches to position: 6668353-6668386, mismatch: 1, identity: 0.971

cgaacggttgtgtatcatgtgtccggtcttaata	CRISPR spacer
cgaacggttgtgtatcatgtgtccggtctaaata	Protospacer
***************************** ****

8. spacer 1.1|4385286|34|NZ_CP036353|CRISPRCasFinder matches to position: 7334143-7334176, mismatch: 1, identity: 0.971

cgaacggttgtgtatcatgtgtccggtcttaata	CRISPR spacer
cgaacggttgtgtatcatgtgtccggtctaaata	Protospacer
***************************** ****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP036353_2	2.1\|6304223\|27\|NZ_CP036353\|CRISPRCasFinder	6304223-6304249	27	MN586029	Mycobacterium phage Hannaconda, complete genome	20334-20360	5	0.815
NZ_CP036353_2	2.1\|6304223\|27\|NZ_CP036353\|CRISPRCasFinder	6304223-6304249	27	NC_004688	Mycobacterium phage Omega, complete genome	25399-25425	5	0.815
NZ_CP036353_2	2.1\|6304223\|27\|NZ_CP036353\|CRISPRCasFinder	6304223-6304249	27	AY129338	Mycobacterium virus Omega, complete genome	25399-25425	5	0.815
NZ_CP036353_3	3.2\|6697654\|25\|NZ_CP036353\|CRISPRCasFinder	6697654-6697678	25	NZ_CP015734	Arthrobacter sp. U41 plasmid unnamed2, complete sequence	70766-70790	5	0.8
NZ_CP036353_3	3.2\|6697654\|25\|NZ_CP036353\|CRISPRCasFinder	6697654-6697678	25	NZ_CP015734	Arthrobacter sp. U41 plasmid unnamed2, complete sequence	163652-163676	5	0.8
NZ_CP036353_2	2.1\|6304223\|27\|NZ_CP036353\|CRISPRCasFinder	6304223-6304249	27	NZ_CP012918	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p4, complete sequence	109360-109386	6	0.778
NZ_CP036353_2	2.1\|6304223\|27\|NZ_CP036353\|CRISPRCasFinder	6304223-6304249	27	NZ_CP043961	Streptomyces tendae strain 139 plasmid unnamed2, complete sequence	671-697	7	0.741

1. spacer 2.1|6304223|27|NZ_CP036353|CRISPRCasFinder matches to MN586029 (Mycobacterium phage Hannaconda, complete genome) position: , mismatch: 5, identity: 0.815

atgcccggaatgggtggcggtatgcct	CRISPR spacer
atccccggaatgggtggcggtgggtca	Protospacer
** ******************. *.*

2. spacer 2.1|6304223|27|NZ_CP036353|CRISPRCasFinder matches to NC_004688 (Mycobacterium phage Omega, complete genome) position: , mismatch: 5, identity: 0.815

atgcccggaatgggtggcggtatgcct	CRISPR spacer
atccccggaatgggtggcggtgggtca	Protospacer
** ******************. *.*

3. spacer 2.1|6304223|27|NZ_CP036353|CRISPRCasFinder matches to AY129338 (Mycobacterium virus Omega, complete genome) position: , mismatch: 5, identity: 0.815

atgcccggaatgggtggcggtatgcct	CRISPR spacer
atccccggaatgggtggcggtgggtca	Protospacer
** ******************. *.*

4. spacer 3.2|6697654|25|NZ_CP036353|CRISPRCasFinder matches to NZ_CP015734 (Arthrobacter sp. U41 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.8

cgtcgccgacgattccagcccgatg	CRISPR spacer
ggtcgccgacgatgccagcccggcc	Protospacer
 ************ ********..

5. spacer 3.2|6697654|25|NZ_CP036353|CRISPRCasFinder matches to NZ_CP015734 (Arthrobacter sp. U41 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.8

cgtcgccgacgattccagcccgatg	CRISPR spacer
ggtcgccgacgatgccagcccggcc	Protospacer
 ************ ********..

6. spacer 2.1|6304223|27|NZ_CP036353|CRISPRCasFinder matches to NZ_CP012918 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p4, complete sequence) position: , mismatch: 6, identity: 0.778

atgcccggaatgggtggcggtatgcct	CRISPR spacer
gtgcccggaatgggcggcgctatggac	Protospacer
.*************.**** ****  .

7. spacer 2.1|6304223|27|NZ_CP036353|CRISPRCasFinder matches to NZ_CP043961 (Streptomyces tendae strain 139 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.741

atgcccggaatgggtggcggtatgcct	CRISPR spacer
ttgcccggaatgggtggcggccccctg	Protospacer
 *******************. . *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2470176 : 2603717

Leptospira_phage(25.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_154898252.1\|2470176_2471604_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_154898252.1\|2471836_2473264_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_154898253.1\|2473305_2473497_-	hypothetical protein	NA	NA	NA	NA
WP_154898254.1\|2473463_2473811_-	hypothetical protein	NA	NA	NA	NA
WP_154898255.1\|2473789_2475310_-	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA
WP_154898256.1\|2475599_2475713_+\|transposase	transposase	NA	NA	NA	NA
WP_154898257.1\|2477139_2478507_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_154901721.1\|2479148_2480672_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	5.7e-90	38.8
WP_154898258.1\|2480767_2481130_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.4e-10	30.2
WP_154898259.1\|2481509_2481776_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	3.6e-08	35.3
WP_154901722.1\|2481769_2482123_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_154898260.1\|2482281_2505567_-	hypothetical protein	A0A1B1IUU8	uncultured_Mediterranean_phage	7.6e-08	36.1
WP_154898261.1\|2507416_2535955_+	hypothetical protein	NA	NA	NA	NA
WP_154898262.1\|2537321_2538188_+	hypothetical protein	NA	NA	NA	NA
WP_154897100.1\|2541516_2542005_+\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	6.7e-08	31.5
WP_145209663.1\|2542001_2542403_+\|transposase	transposase	NA	NA	NA	NA
WP_154898263.1\|2542857_2543775_+	hypothetical protein	NA	NA	NA	NA
WP_002648777.1\|2544220_2544613_+	hypothetical protein	NA	NA	NA	NA
WP_154898264.1\|2544851_2545637_+	hypothetical protein	NA	NA	NA	NA
WP_154898265.1\|2545670_2546891_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_154898266.1\|2546895_2547588_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.0e-30	36.6
WP_154898267.1\|2547728_2549402_+	TolC family protein	NA	NA	NA	NA
WP_154898268.1\|2550249_2551893_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_154898269.1\|2551910_2555105_+	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_081459603.1\|2555425_2556085_+	hypothetical protein	NA	NA	NA	NA
WP_002648767.1\|2556221_2556578_-	hypothetical protein	NA	NA	NA	NA
WP_154898270.1\|2557144_2558776_-	metallophosphoesterase	NA	NA	NA	NA
WP_154898271.1\|2559141_2559489_-	hypothetical protein	NA	NA	NA	NA
WP_154898252.1\|2559645_2561073_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_002648763.1\|2561799_2562354_-	hypothetical protein	NA	NA	NA	NA
WP_002648761.1\|2562829_2563525_+	response regulator transcription factor	NA	NA	NA	NA
WP_154898272.1\|2563521_2564940_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	6.7e-16	26.3
WP_002648759.1\|2565763_2567440_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_002648758.1\|2567657_2568017_+\|transposase	transposase	NA	NA	NA	NA
WP_002648757.1\|2568653_2569403_+	hypothetical protein	NA	NA	NA	NA
WP_002648756.1\|2569529_2569865_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_154898273.1\|2570172_2571528_+	type IV secretion protein Rhs	NA	NA	NA	NA
WP_002648754.1\|2571545_2572067_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_154898274.1\|2572581_2572983_-\|transposase	transposase	NA	NA	NA	NA
WP_154898275.1\|2572979_2573345_-\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	5.0e-08	31.0
WP_154901723.1\|2574000_2575455_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_154901724.1\|2575651_2576953_+	hypothetical protein	NA	NA	NA	NA
WP_081459583.1\|2576903_2577470_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_154898276.1\|2577673_2578729_+	hypothetical protein	NA	NA	NA	NA
WP_154898277.1\|2578728_2579055_+	hypothetical protein	NA	NA	NA	NA
WP_154898278.1\|2579098_2579593_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_154898279.1\|2580015_2581383_+	hypothetical protein	NA	NA	NA	NA
WP_154898280.1\|2581418_2581895_+	hypothetical protein	NA	NA	NA	NA
WP_154898281.1\|2582069_2582288_+	hypothetical protein	NA	NA	NA	NA
WP_154898282.1\|2583579_2584227_+	hypothetical protein	NA	NA	NA	NA
WP_154898283.1\|2584428_2585265_+	hypothetical protein	NA	NA	NA	NA
WP_154898284.1\|2585678_2586359_+	hypothetical protein	NA	NA	NA	NA
WP_154901725.1\|2586549_2587779_+	type IV secretion protein Rhs	NA	NA	NA	NA
WP_154898285.1\|2588479_2589589_+	hypothetical protein	NA	NA	NA	NA
WP_154898286.1\|2589524_2589818_+	hypothetical protein	NA	NA	NA	NA
WP_154898287.1\|2589823_2590339_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_154898288.1\|2591125_2592382_+	filamentous hemagglutinin family protein	NA	NA	NA	NA
WP_154898289.1\|2592393_2593122_+	hypothetical protein	NA	NA	NA	NA
WP_154898290.1\|2594580_2595114_+	hypothetical protein	NA	NA	NA	NA
WP_154898291.1\|2596661_2597204_+	hypothetical protein	NA	NA	NA	NA
WP_154898292.1\|2597232_2598525_+	hypothetical protein	NA	NA	NA	NA
WP_154898293.1\|2598529_2599165_+	hypothetical protein	NA	NA	NA	NA
WP_002645178.1\|2599945_2601313_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_154898294.1\|2602778_2603519_-	hypothetical protein	NA	NA	NA	NA
WP_154898295.1\|2603582_2603717_+\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

3734328 : 3780718

Pseudomonas_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_154901755.1\|3734328_3734496_+\|transposase	transposase	NA	NA	NA	NA
WP_154899079.1\|3734693_3735725_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_154899080.1\|3735655_3736663_-	hypothetical protein	NA	NA	NA	NA
WP_154899082.1\|3737126_3737477_-	SdpI family protein	NA	NA	NA	NA
WP_154899084.1\|3738192_3741483_+	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA
WP_154899086.1\|3741989_3742217_-	carbon storage regulator	H2BD56	Pseudomonas_phage	6.5e-06	48.9
WP_154899088.1\|3742287_3742686_-	BON domain-containing protein	NA	NA	NA	NA
WP_154899090.1\|3742682_3743108_-	response regulator	NA	NA	NA	NA
WP_154899092.1\|3743407_3745330_+	PAS domain S-box protein	NA	NA	NA	NA
WP_154899094.1\|3745293_3745992_+	response regulator transcription factor	NA	NA	NA	NA
WP_154899096.1\|3746144_3747002_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.0e-59	43.2
WP_154899098.1\|3746998_3747319_-\|transposase	transposase	NA	NA	NA	NA
WP_154899100.1\|3747369_3748125_+	N-6 DNA methylase	A0A2H4PQP4	Staphylococcus_phage	1.3e-34	44.8
WP_154899102.1\|3748138_3748552_+	hypothetical protein	NA	NA	NA	NA
WP_154899104.1\|3749713_3751210_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_154899106.1\|3751872_3752307_+	hypothetical protein	NA	NA	NA	NA
WP_154899108.1\|3752361_3752520_-	hypothetical protein	NA	NA	NA	NA
WP_154899110.1\|3752600_3753461_-\|transposase	transposase	NA	NA	NA	NA
WP_154899112.1\|3753832_3754714_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_154899114.1\|3756323_3757685_+	HD domain-containing protein	NA	NA	NA	NA
WP_154899116.1\|3758911_3760384_-	hypothetical protein	NA	NA	NA	NA
WP_154899118.1\|3760559_3760742_+	hypothetical protein	NA	NA	NA	NA
WP_154899119.1\|3761143_3761998_+	hypothetical protein	NA	NA	NA	NA
WP_154899120.1\|3762564_3763419_+	hypothetical protein	NA	NA	NA	NA
WP_154899122.1\|3763495_3763807_+	hypothetical protein	NA	NA	NA	NA
WP_154899124.1\|3763803_3764325_+	hypothetical protein	NA	NA	NA	NA
WP_154899126.1\|3765084_3765399_-	hypothetical protein	NA	NA	NA	NA
WP_154899128.1\|3765395_3768476_-	hypothetical protein	NA	NA	NA	NA
WP_154899130.1\|3768396_3779964_-	tandem-95 repeat protein	NA	NA	NA	NA
WP_145209663.1\|3779831_3780233_-\|transposase	transposase	NA	NA	NA	NA
WP_154897100.1\|3780229_3780718_-\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	6.7e-08	31.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP036353

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection