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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP036274 Planctomycetes bacterium ETA_A8 chromosome, complete genome 5 crisprs WYL,RT,csa3,cas3,Cas9_archaeal 2 2 1 0

Results visualization

1. NZ_CP036274
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP036274_1 26006-26077 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP036274_2 556580-556681 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP036274_3 3532570-3532649 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP036274_4 5088583-5088816 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP036274_5 7251412-7251489 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP036274_1 1.1|26029|26|NZ_CP036274|CRISPRCasFinder 26029-26054 26 NZ_CP036274.1 26077-26102 0 1.0
NZ_CP036274_4 4.1|5088601|36|NZ_CP036274|CRT 5088601-5088636 36 NZ_CP036274.1 4746136-4746171 0 1.0

1. spacer 1.1|26029|26|NZ_CP036274|CRISPRCasFinder matches to position: 26077-26102, mismatch: 0, identity: 1.0

tgatgcttcgcactgctacgcttcgg	CRISPR spacer
tgatgcttcgcactgctacgcttcgg	Protospacer
**************************

2. spacer 4.1|5088601|36|NZ_CP036274|CRT matches to position: 4746136-4746171, mismatch: 0, identity: 1.0

cggtggcagtggcccgacgaccctcatcggcggcat	CRISPR spacer
cggtggcagtggcccgacgaccctcatcggcggcat	Protospacer
************************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP036274_3 3.1|3532596|28|NZ_CP036274|CRISPRCasFinder 3532596-3532623 28 CP054921 Streptomyces sp. NA03103 plasmid unnamed1, complete sequence 92273-92300 7 0.75
NZ_CP036274_5 5.1|7251435|32|NZ_CP036274|CRISPRCasFinder 7251435-7251466 32 NZ_CP017104 Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence 410750-410781 10 0.688
NZ_CP036274_5 5.1|7251435|32|NZ_CP036274|CRISPRCasFinder 7251435-7251466 32 NZ_CP051182 Thalassobius gelatinovorus strain NEB572 plasmid pAge77, complete sequence 6561-6592 11 0.656

1. spacer 3.1|3532596|28|NZ_CP036274|CRISPRCasFinder matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

tagttcggtcactccgtgaccgagaagc	CRISPR spacer
ccaggcggtcactccgtgttcgagaagc	Protospacer
. .  ************* .********

2. spacer 5.1|7251435|32|NZ_CP036274|CRISPRCasFinder matches to NZ_CP017104 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence) position: , mismatch: 10, identity: 0.688

tgaataagcttcgcgcagtggctgcaacgcca	CRISPR spacer
cagttccgcctcgcgcggtggctgcaacgcac	Protospacer
... *  **.******.*************  

3. spacer 5.1|7251435|32|NZ_CP036274|CRISPRCasFinder matches to NZ_CP051182 (Thalassobius gelatinovorus strain NEB572 plasmid pAge77, complete sequence) position: , mismatch: 11, identity: 0.656

tgaataagcttcgcgcagtggctgcaacgcca	CRISPR spacer
cagcgcctcttcgcgcattggctgcaccgccg	Protospacer
...     ********* ******** ****.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 8219694 : 8277082 37 Microcystis_virus(33.33%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage