CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP036276	Planctomycetes bacterium Mal52 chromosome, complete genome	3 crisprs	RT,DinG,DEDDh,cas3,csa3	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP036276_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036276_1

70105-70205

Orphan

Consensus_repeat	Method
TGACGGTTGACCGCAGCAGTCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP036276_1

>merge|NZ_CP036276|1|70105-70205|CRISPRCasFinder
TGACGGTTGACCGCAGCAGTCGCGTGAACACGGCTGGGCTGGGTTCGCACGGCATTATTGCCGCCGACACTTCGGTGGTGACAGTTGACCGCAGCAGTCGC

>NZ_CP036276|1|1|70105-70205|CRISPRCasFinder
TGACGGTTGACCGCAGCAGTCGC	GTGAACACGGCTGGGCTGGGTTCGCACGGCATTATTGCCGCCGACACTTCGGTGG
TGACAGTTGACCGCAGCAGTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036276.1\|WP_145373620.1\|75852_77193_+\|DUF1593-domain-containing-protein	unknown	unknown	gnl\|CDD\|377887
NZ_CP036276.1\|WP_145373609.1\|51788_52226_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319910
NZ_CP036276.1\|WP_145380477.1\|71732_74717_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|274225
NZ_CP036276.1\|WP_145373623.1\|80912_81473_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP036276.1\|WP_145380480.1\|84393_85464_-\|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl\|CDD\|234832
NZ_CP036276.1\|WP_145373614.1\|59468_62624_+\|DUF1553-domain-containing-protein	unknown	unknown	gnl\|CDD\|377872
NZ_CP036276.1\|WP_145373622.1\|79630_80896_+\|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl\|CDD\|368448
NZ_CP036276.1\|WP_145373615.1\|62620_64054_+\|DUF1501-domain-containing-protein	unknown	unknown	gnl\|CDD\|369346
NZ_CP036276.1\|WP_145373610.1\|52568_53018_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036276.1\|WP_145373611.1\|54331_54766_-\|DUF1330-domain-containing-protein	unknown	unknown	unknown
NZ_CP036276.1\|WP_145373617.1\|65652_66717_+\|PKD-domain-containing-protein	unknown	unknown	gnl\|CDD\|214510
NZ_CP036276.1\|WP_145373612.1\|54920_56114_-\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238141
NZ_CP036276.1\|WP_145380478.1\|78884_79487_+\|peptide-methionine-(S)-S-oxide-reductase-MsrA	unknown	unknown	gnl\|CDD\|237597
NZ_CP036276.1\|WP_145373613.1\|56319_59349_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|274225
NZ_CP036276.1\|WP_145380479.1\|81873_83142_+\|citrate-synthase	unknown	unknown	gnl\|CDD\|99867
NZ_CP036276.1\|WP_145373619.1\|74814_75588_-\|aldolase	unknown	unknown	gnl\|CDD\|226356
NZ_CP036276.1\|WP_145373624.1\|83252_84218_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|213355
NZ_CP036276.1\|WP_145373616.1\|64248_65307_+\|linear-amide-C-N-hydrolase	unknown	unknown	gnl\|CDD\|238885
NZ_CP036276.1\|WP_145380476.1\|53289_54234_+\|DUF1559-domain-containing-protein	unknown	unknown	gnl\|CDD\|284919
NZ_CP036276.1\|WP_145373621.1\|77218_78409_-\|pectate-lyase	unknown	unknown	gnl\|CDD\|312856

Protein	Function_ID	Function_description	E-value
NZ_CP036276.1\|WP_145373620.1\|75852_77193_+\|DUF1593-domain-containing-protein	gnl\|CDD\|377887	pfam07632, DUF1593, Protein of unknown function (DUF1593). A family of proteins in Rhodopirellula baltica that are predicted to be secreted. Also, a member has been identified in Caulobacter crescentus. These proteins mat be related to pfam01156.	1.76091e-99
NZ_CP036276.1\|WP_145380477.1\|71732_74717_-\|c-type-cytochrome	gnl\|CDD\|274225	TIGR02604, Piru_Ver_Nterm, putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) (SP\|Q44091) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.	2.76612e-83
NZ_CP036276.1\|WP_145373623.1\|80912_81473_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	4.99026e-10
NZ_CP036276.1\|WP_145380480.1\|84393_85464_-\|3-isopropylmalate-dehydrogenase	gnl\|CDD\|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0
NZ_CP036276.1\|WP_145373614.1\|59468_62624_+\|DUF1553-domain-containing-protein	gnl\|CDD\|377872	pfam07583, PSCyt2, Protein of unknown function (DUF1549). A family of paralogues in the planctomyces.	2.72624e-120
NZ_CP036276.1\|WP_145373622.1\|79630_80896_+\|prolyl-oligopeptidase-family-serine-peptidase	gnl\|CDD\|368448	pfam05448, AXE1, Acetyl xylan esterase (AXE1). This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyze the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan.	5.5801e-13
NZ_CP036276.1\|WP_145373615.1\|62620_64054_+\|DUF1501-domain-containing-protein	gnl\|CDD\|369346	pfam07394, DUF1501, Protein of unknown function (DUF1501). This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.	2.04763e-179
NZ_CP036276.1\|WP_145373613.1\|56319_59349_+\|c-type-cytochrome	gnl\|CDD\|274225	TIGR02604, Piru_Ver_Nterm, putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) (SP\|Q44091) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.	5.12656e-115
NZ_CP036276.1\|WP_145373609.1\|51788_52226_+\|VOC-family-protein	gnl\|CDD\|319910	cd07246, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	2.15132e-46
NZ_CP036276.1\|WP_145373617.1\|65652_66717_+\|PKD-domain-containing-protein	gnl\|CDD\|214510	smart00089, PKD, Repeats in polycystic kidney disease 1 (PKD1) and other proteins. Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.	1.24333e-12
NZ_CP036276.1\|WP_145373612.1\|54920_56114_-\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238141	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	3.65972e-25
NZ_CP036276.1\|WP_145380478.1\|78884_79487_+\|peptide-methionine-(S)-S-oxide-reductase-MsrA	gnl\|CDD\|237597	PRK14054, PRK14054, peptide-methionine (S)-S-oxide reductase.	1.37129e-101
NZ_CP036276.1\|WP_145380479.1\|81873_83142_+\|citrate-synthase	gnl\|CDD\|99867	cd06114, EcCS_like, Escherichia coli (Ec) citrate synthase (CS) GltA_like. CS catalyzes the condensation of acetyl coenzyme A (AcCoA) and oxalacetate (OAA) to form citrate and coenzyme A (CoA), the first step in the citric acid cycle (TCA or Krebs cycle). The overall CS reaction is thought to proceed through three partial reactions and involves both closed and open conformational forms of the enzyme: a) the carbanion or equivalent is generated from AcCoA by base abstraction of a proton, b) the nucleophilic attack of this carbanion on OAA to generate citryl-CoA, and c) the hydrolysis of citryl-CoA to produce citrate and CoA. There are two types of CSs: type I CS and type II CSs. Type I CSs are found in eukarya, gram-positive bacteria, archaea, and in some gram-negative bacteria and are homodimers with both subunits participating in the active site. Type II CSs are unique to gram-negative bacteria and are homohexamers of identical subunits (approximated as a trimer of dimers). Some type II CSs including EcCS are strongly and specifically inhibited by NADH through an allosteric mechanism. Included in this group is an NADH-insensitive type II Acetobacter acetii CS which has retained many of the residues used by EcCS for NADH binding.	0
NZ_CP036276.1\|WP_145373619.1\|74814_75588_-\|aldolase	gnl\|CDD\|226356	COG3836, HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism].	1.19153e-59
NZ_CP036276.1\|WP_145373624.1\|83252_84218_+\|hypothetical-protein	gnl\|CDD\|213355	cd12821, EcCorA_ZntB-like, Escherichia coli CorA-Salmonella typhimurium ZntB_like family. A family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of this family are found in all three kingdoms of life. It is a functionally diverse family, including the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs (which can also transport Co2+, and Ni2+ ), and the Zn2+ transporter Salmonella typhimurium ZntB which mediates the efflux of Zn2+ (and Cd2+). It also includes two Saccharomyces cerevisiae members: the inner membrane Mg2+ transporters Mfm1p/Lpe10p, and Mrs2p, and a family of Arabidopsis thaliana members (AtMGTs) some of which are localized to distinct tissues, and not all of which can transport Mg2+. Structures of the intracellular domain of Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.231e-50
NZ_CP036276.1\|WP_145373616.1\|64248_65307_+\|linear-amide-C-N-hydrolase	gnl\|CDD\|238885	cd01902, Ntn_CGH, Choloylglycine hydrolase (CGH) is a bile salt-modifying enzyme that hydrolyzes non-peptide carbon-nitrogen bonds in choloylglycine and choloyltaurine, both of which are present in bile. CGH is present in a number of probiotic microbial organisms that inhabit the gut. CGH has an N-terminal nucleophilic cysteine, as do other members of the Ntn hydrolase family to which CGH belongs.	1.84595e-156
NZ_CP036276.1\|WP_145380476.1\|53289_54234_+\|DUF1559-domain-containing-protein	gnl\|CDD\|284919	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559). A large family of paralogous proteins apparently unique to planctomycetes.	5.27426e-63
NZ_CP036276.1\|WP_145373621.1\|77218_78409_-\|pectate-lyase	gnl\|CDD\|312856	pfam09492, Pec_lyase, Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.	4.85768e-117

>NZ_CP036276.1|WP_145373617.1|65652_66717_+|PKD-domain-containing-protein
MHSVCLLIAALSIGLERPDVEYQVFQFPANQIPRIDGDADDWSIVPESYTIGTKELRETVIGLGDKHDPDNLDVQVNVGWVKGLNRLYFLYEAQDNYWDFARGDLHNDIFEIVVDGDLSGGPLIRQMHPNPKLRDKLDTHFQFHGVHAQNYHIFTPAEGKDWAMVWGAQPWIKDLPYANAACKYNFKHGESGKLVLEFFVTPFDYAPPNPARSVPSKLVEDKKIGLSWAVLDYDDEQAERYSGFWNLSHKTTMYGNASDLVAFRLMPLEKRFRKPVEADWSFQVINRVNRDVAFRDRSYGDITSWRWEFGDGTSSTERHPTHHYKKPGEFIVTLHVEGPKGKAKLAKIWDVTLP
>NZ_CP036276.1|WP_145373616.1|64248_65307_+|linear-amide-C-N-hydrolase
MPRRCRRSMFAVIAASSAFVVMLAAPVADACTRALYFGKQAQTVTGRTMDWSEDMHSNMWIFPRGLDRESGLERGGLKWTSKYGSVVTSVYEGASADGMNEKGLVANLLYLAESEYTDPGDKRPALVISSWAQYVLDSFATVEEAVADARKEAYRMVTVTLPNGKKGNVHLAISDRSGDSAIFEYLDGKLVIHHGKQYQVMTNSPSYDQQLALNAYWKEIGGTVMLPGTNRAADRFARASFYINACKQSANPREAVASVFSVMNNCSVPLGITTPNQPNISSTLWRTVADQKNRVYYYQSTISPSLLWVDLADINFEYGSGTRKLLMDGNPNLGGNQTANFKEAEPFKFLAP
>NZ_CP036276.1|WP_145373615.1|62620_64054_+|DUF1501-domain-containing-protein
MNDPMPSSLNSDNLNQRLTSRRWFLQECGIGLGAVALGQLLDQKAVAADALAPKQPHFPGRAKNVIQLFMGGGPSHLELFDHKPALAKFDGQLPPADLIKDYRAAFISPNSKLLGPKFKFSKHGECGAELSELLPNMAEVVDEIAIVKSMVTDAFNHAPAQIIMSTGSQQFGKPSLGAWTTYGLGCESRDLPAFVVLSSGNKGPSGGNANWGSGFLPTVYQGVSFRSTGEPVLYLSNPAGVDQQLQRDSLDVITQLNERKQQEVGDPEIATRINSFEMAYRMQSSAPELMDMSSEPQHILEMYGAEPGVPSFAMNCLLARRMIERGVRFVEMFHESWDQHGGLVKGLKQNCADTEQASAALVKDLKQRGLLDETLVIWGGEFGRTPMVQGSTDGRDHHPNAFSMWLAGGGVKGGVTLGASDDFGFNVIEDRVHVHDLHRTILHLLGFDGNQLTFPYQGLDQRLVGVEPTRIVKELLA
>NZ_CP036276.1|WP_145373614.1|59468_62624_+|DUF1553-domain-containing-protein
MVRAIRFCGCLILFVGAAVFYGIELQAEEPSKPTGAKQDSTEKVSFRREILPLLSERCFLCHGPDEGTREAELRLDLAEEATRDRDGTFVIKPGDPAASEILARLTADDEALIMPPSDSGHEPLSKSQIEKVRRWIAEGAQWSRHWAFVPPERSDVPTVKNSAWVRNPIDAFVLQRLEQEQLAPTAEAKRVTLLRRLSLDLIGLPPTVDEIDAFLTDESPAAYERQVERLLASPHYGERWGRIWLDAARYADSDGFEKDKPREVWFYRDWVIKALNRDLPYDQFIIEQIAGDLLPNATQDQIVATGFLRNSMLNEEGGIDPEEFRMQAMFDRMDTVGKSVLGLTVQCAQCHSHKYDPFTHHDYYNMFAFLNNCHEAQPTVYTVAQQQKRDDIFRRINEIEEQLRATTSDWRERMAAWEEQVRGDQPQWTMLPIENAGNNSQRYLQQQDGSLLAQGYAPTRSTGQFSVTTDLPSIRSFRLEVLNDPNLPAGGPGRAMNGLLALSEFKAQAVSIDDPQQKTDIKFTRATADFSNDHRQLGPPYTDGKDPKAGITGPVEYAIDGDQKTAWGIDAGPGRRNQPRKAVFVAEKDVAFPGGTKLVFNLAQSHGGSNSNDNQTLNLGRFRISATDVEAVADPLPAAVREILEVPMEDRTESQMRTVFRYWRTTVADWSAENEQIETLWSEHPEGTTQFVLRERDTERPTHLLDRGDFLKPKDIADPAVPEFLNPLSQGKPVNRLAFAKWLVDPQSPTTARSIVNRVWQAYFGTGIVDTPEDLGSTGSPPSHPELLDWLSVELVEQGWSLKHLHRQIVLSNTYRQDSSVTAELLARDPANRLLARGPRFRVDAEVVRDIFLAASGLLEKKVGGPSVFPPAPEFLFRRPASYGDKTWNVETGPQRYRRALYTFRFRSIPYPALQAFDAPSGEIATVRRPRSNSPLQALTTLNEPLFFECAEGLAQQTIAHGGESDQDRLDYAFRSCVSRKPTPEESATLLEFLDEQTQRLQDGSLDPKQILGNQQGDTSELPEIVEQIQLAAWTVVSRVLLNLDETITKE
>NZ_CP036276.1|WP_145373613.1|56319_59349_+|c-type-cytochrome
MPFWKYQSRAILAALVATVFSGTLFAAEEAPLLRNTEAGSPPSAEETVERIQVPDGFQVTLFASEPDVQQPIGMTTDERGRLWVAENYTYAEHPLGFDKTQHDRIVILEDTNDDGQFDVRKVFIDDLQKLTSVEVGMGGVWVLCAPQLLFIPDRNHDDVPDGPPEVVLDGWDEGSVRHNIVNGLRWGPDGWLYGRHGILATSFVGPPGASASQRRKLNCCIWRYHPTRKVFEVVADGTTNSWGFDFDEHGEMFFINTVIGHLWHLVPGAHYRRMYGADFNPYVYELIEQCADHFHWDTGEVWHQIRKGVSDTTLAAGGGHAHSGLMIYQGDNWPERYRGTMLTLNFHGRRMNNDRLERDQAGYVGKHAEDLFIVDNPWFRGLDLITGPDGGVFIADWSDSGECHDNDGIHRTSGRIYKMTYGQPRSLVGLDLAKLSDLELVALQSHENAWYARQSRRLLQERAALGQEMPQVRKALLKMFADDTDVTHQLRAMWCLYAVGATNEEWLRSQLDDDNEHVRVWALRLLADEGMFSAPTIVKMRELAQADPSGLVRLYLASTLQRLPLESRWDIADALAQHAADAQDRALPLMIWYGIEPAIPTDPGRSIALAERSKIGLLRRLIARRLTSDLESQPVAVDQLLQLIGAGNDAEFQLDILQGMNGALRGWRKAPQPKTWPRAAEIVFSSAPEKVQEQARQLGVVFGDGQAISELRDIVTDTDADAETRRNALRFLVDDRSPEALALLKHVLGDLVLMNEVLRGFAAFDDPQIPQLILQRYARLEPSAREVAIATLASRPASASALLKAIADGKIEASAISAFHARQIRSFKDPALNEELTKQWGALRDTSEEKVKRIAELNAALAPEKLQAGHAGKGRVLFEKTCSNCHVLYGAGGRVGPDLTGSNRQNLNYLLENIVDPSASVGQEFQASAIVLNDGRVVTGVVMAQSDRTLEVQTEKERLVIDRSDVEEVVNQKMSLMPDGLLKQLKAEEIRDLFAYLTSRSQVPLPSKP
>NZ_CP036276.1|WP_145373612.1|54920_56114_-|SGNH/GDSL-hydrolase-family-protein
MLPQRFLPTSTDLRRIRPVIMLLLAMQAVVYAEEPKPGSWTYAPELLRPFWQGDRVEGESVLFIKDPQTGGAKASLLFPVTKVVSVQNSAGDMTYEEGRDYTWKPGSREIVLPAGSRIASRTPQDLRRPTGSQRFRLTHRDGNGEIFFGAVLEYADMQTCITYEHAADQWKSPLPKFDAQALPRTVGKLTNKQPLSIVLIGDSISAGANSSALGKAPPFQPAYPELLQIHLESRFGAPVELTNLAVGGTTTTWGLTQIDKVIESKPDLVILAFGMNDSSGRSAQEYQANTQKMIDLIREQLPETEFILVASMLGNRDWTALKQELFPAYRDALAQLCKPGIALADVTSIWTEILNRKQDWDQTGNGVNHPNDFGHRIYTQTIATLLEPDSKQKPKTP
>NZ_CP036276.1|WP_145373611.1|54331_54766_-|DUF1330-domain-containing-protein
MDEYFLEPTQQAGAQLFSRGLTGEVVMLNLLRFKDIADYAAHPEIAPEAAISGKAAFQKYIDHAQPFLKSSGGELMFMGTGGPFFIGPDHEQWDLVMLVKQRSLADFMAFASNPEYLAGLGHRTAALQDSRLLPIVQSKDGNIE
>NZ_CP036276.1|WP_145380476.1|53289_54234_+|DUF1559-domain-containing-protein
MRTQLERSRSRGFTLIELLVVIAIIAILIALLLPAVQQAREAARRTQCKNNLKQLALAAHNYYDSHSCFPPAGIHTVDIDPTLAWHSFHTYILPYIEQGNLYETIAIDQTIYANLPAPVSPLDIRAGEQQISTFRCPSEPGTGMGDYEGQIPGIPEGVVVLATTDYAVLDGLGTAFAALISPDTPSGETGLIRFNRAMRFRDATDGTSNTALLWEDAGRMDVWELGKKVAGENSSGAWMDMQTEFYIHGSNLDGSGGRCAINCTNEDEIYSFHTGGAQVAIADGSVHFISSSVDFGVIAAYVSAAGGEIPGAAF
>NZ_CP036276.1|WP_145373610.1|52568_53018_+|hypothetical-protein
MKRHVMVGLALVVLGAISGCGESGPDLSSVTGSVLYQGNPAAGALVIFNPVSGEKGSLKRPSAQVADDGSFQLSTLGAADGAAPGDYLVTVLWLEGGGGSEGEQGLGASQRSKAGGPDRLGGRYSRPESSGLKATIVAGENVLPPFELK
>NZ_CP036276.1|WP_145373609.1|51788_52226_+|VOC-family-protein
MIQDVFPYLRMRNAGAAIEFYTTAFGAVEEFRLMDPGGRIGHAELKFGTFTVMLSDEYPEYGIQGPEAFGGCGTSIHLHVDDVDSMTQRAVSAGAKIVMEPKDQFYGERTSKILDPFGHEWLLGSHIEDVSREEMQRRFDELMAE
>NZ_CP036276.1|WP_145380477.1|71732_74717_-|c-type-cytochrome
MRLILLFLVALTQLAIPLVAAPPIIPRRQDKPPGPPLSPQEAIAKMTVPEGFTVELVASEPDIINPVAMTFDERGRIWITESVEYPRSSPGKGRDRIKVLEDTDGDGRVDKTTVFADGLNIPSGIAVGYGGVWVANAPDILFLRDTDGDLKADTTEVVVTGFGRDDTHELPNSLTWGPDGYLYGLNGVFNHCHVRQNGKEFDFTCALFRINPRTREFELFCEGTSNPWGVTWDEEGSAFISACVIDHLWHLTETGYYHRQGGPYPPFTWKLQSIVKHKHQKAAYCGIHYFDSDAYPPEYRNRLYMGNIHGGCLNVDVLERKGSTYFATPRPDFLTANDVWFMPVAQKTGPDGCLYVLDWYDRYHCYQDARRDTPGVDRLKGRLYRIRYNNTPRAESFDMASESGDELIERLSGPNDYFRGVAQRLLAERNDATTNRKLQELCLNNDAPRKTRLHALWALIGTGALEEPFHRRLLDHDDATFCAWGVRAAGNYGDVSDEIDQRIAALASDDSPDVQLQVAIAAPKIDDLDTMPVLLDVLSHCDNDQLIPHIVWQNLHPRLDEHPQQFIELLTQRDFQQDRNIMALLPRLLDRLLAVEQGGPESAAQIYSTLIAADGDQAAPNDSLIVLAKRIQTGELAGDRLSRLRTILEPQVQSLLTGDAMPPQADTVILAASWGDKASLDICRQLFESAEQPTPERIRALEVLASQNDKTILPTVQGILTDPEQHAQKFRAAIIATLGQMQDPGVADVILAAYPGLEPDLQPDAIERLTDRGHWSKKLLTAIDEKKIPANAINVNQVRKLLASKDKDLVKSVRSVWGTVRTKRDPNREKVLAQMRTFLRKTPGDAAAGQQVFHKLCGQCHTIHGKGADLGPDITVNGRASYEQLLSNVFDPSLVIGAAYRATIIVTTKGRVVTGLVVEDNAQRIVLKVQGGKLETIPRDQIEERIVSKLSMMPENLESQLKPQEMADLFEFLTRATPPGDPHPRHIPGTPQQK
>NZ_CP036276.1|WP_145373619.1|74814_75588_-|aldolase
MQENPVKRKLATGDYSLGTFVFEFNSTGIARIAAAAGAEFIVFDMEHTGWSVESIRMLMATTPDGTVPIVRVPVTEYHFIARIFDMGAMGVMVPMVETAEQAELIVRSSKYPPAGRRGAAFGVAHDDYQGGDIVEKMNSANSQQQLIAQIETAAGVENADAIAAVPGIDVLWIGHFDLSNSLGIPAQFDHPQFKSAVSRVLEAAHKHGKIGGFMAEGVDNATALIKQGFQMIAFGGDLWIYQKALAGGLSAVREQAE
>NZ_CP036276.1|WP_145373620.1|75852_77193_+|DUF1593-domain-containing-protein
MNKCGALVLATILVFLAVTVPASAADATGRPRVIVTTDGEVDDRCSMNRFLLYANDWDIRGLIHSSSKHHWKGNAQDPGHRWNDVSWLDKQLAAYEAVYPQLKQHAPGYPTADELRSQVFVGNIELEGDMREATPGSNRIVEVLLEKDPSPVWLQAWGGANTIARALKTIEEKYPNRVEEVSAKAKIFLITHQDNTYDTYIRKQWPNVEVLLSNYPSFGAIAYGWGKLLPKDEKKYFGRVWMRENLLKKHGPLLDLYEHKELRFRSEGDSPAFLHVINTGLRSDEHPTYGGWGGRFYQAKPHLWRSVDGKQPGPHSISRWAIDFQNDWAARADWCVKDYEQANHHPVVTLRNEQDITASPGANIVLEAEASDPDGNTLQYQWWPYQEAGTYPESLTIENAEAPRATFRVPDDAQPGQTMHLVCTVSDNGTPPLKKHRRVIVTCGPE
>NZ_CP036276.1|WP_145373621.1|77218_78409_-|pectate-lyase
MWPDFKGYRQSAIVLAVCVVGTVMNHVACRADEADTKLQQALQGTYEPIDLSLFRDSIHHWQMKDGRGRNDQRYRPEQIVHIAENLLRYQNADGGWPANLDWLAEIDVEEIRKIRKGSLGRSTFDNRNTYPQIEYLARVYQATGLPRYREAAVKGLDYLLREQRPTGGWRGKDVDAITFNDDVMVGVMRLLLKIRNGSADFAWLDLPLRARLDRSLEQAIDATLKCQIEVNGRKTAWCQQHDHVTFAPVRARTYELPSITPQESTGVVRFLMELPHPSPEVIEAVESAMAWFEASKIEGLRIKTVPITPVRFEGFTAKIDRIEVQDPQAPPIWTRFYEIETNRPFFCNRDGIKVYRLADVKLERRVGYGWYGNWPVHLKTDVYPAWKARISTPVSP
>NZ_CP036276.1|WP_145380478.1|78884_79487_+|peptide-methionine-(S)-S-oxide-reductase-MsrA
MPESNKPEPTPQTDAVEPAGPAATEVATFGAGCFWCTEGVFLQLKGVQSVVSGYTGGQVPNPTYEQICTGRTGHAEVVQITFDPSVVTFADLLKVFWQTHDPTTLNRQGNDTGTQYRSAIFYHSPEQQQQAEAYKKQLDESGAFANPIVTEIVAAQEFFPAEDYHQNYYDLNEQQPYCQFVIRPKIEKLKKEFQDKLKTN
>NZ_CP036276.1|WP_145373622.1|79630_80896_+|prolyl-oligopeptidase-family-serine-peptidase
MQNLRTIFAVASLLWIPTVAMADSAIKPSPQLPATMPWDLEALSQPPSFEWVDEQSPVRSLFYAGEPYGGQPTRVFASYATPGTLAGDSSLDKNLPAVVLLHGGGGTAFKEWAELWAKRGYAAIAMDLAGHRPVEGKNPHDGRNRTRLDDGGPNQGDEEKFGSIDKPAKEQWPYHAVANAIRAHSLIRSFSGVDPQRTAVTGISWGGYLTCIVSGVDNRFKAAVPVYGCGFLQENSAWVPRMAKMEPKQRERWVQLWDPSKYLPAVSMPILFVNGTNDFAYPLDSYMKSFDVVPSPKQLRVTVNMPHGHPPGWAPQEIGLFVDQHLRGADPLPKLDMLMVKDGQASLRWQGPKKITKAELHYTTDTVEINKRKWKSIPAKIEGQQVVATAPPENATVWFFTVQDERGAVVSSRVTFSGESP
>NZ_CP036276.1|WP_145373623.1|80912_81473_+|SMI1/KNR4-family-protein
MSNKYDDAMKRLEAGFLLRSSRRSKKRGTCQRYDSALPLTEHDLLQLETILPDPIPDGYRHFLQFYGDACWRSRQWKCLLIDEPDITLNVSYFFGIRENSCYPLRPEYENNVVQHDMLPRLLPIAQGDGGTYCISLSGDDRGQVFSWHTDDVGQEVLDGETVVISDGTCFVAYSFDEFLHQIYLID
>NZ_CP036276.1|WP_145380479.1|81873_83142_+|citrate-synthase
MGTAKLVLDGQEYELPVITGSEGERAVDITSLRSEADIITLDSGYGNTGSCESAITFINGEEGILRYRGYPIEQLAESATFPEISYLLIYGELPNQEQLSNFRQQLTFHSMIHEDMKKFFEGFRPSAHPMAILSAMVASMSTYYPELDEDDDMNVIRLLAKAKTIAAYAYKKSIGQPFIYPRDDLSYCANFLHMMFAMPTTTYDVPPELANALNMLLILHADHEQNCSTSTVRMVASSQANFFASISAGIGALSGPLHGGANQKVLEMLEMIQQDGGDYMKYVNLAKDKDDEFRLMGFGHRVYKNFDPRATFLRKAADDVIKTMGINDPLLNIAKGLEEVALSDEYFIERKLYPNVDFYSGILYRAMGIPPAMFTVMFALGRLPGWIAHWKELRQDPGSRINRPRQVYTGPNERTYVPMDQR
>NZ_CP036276.1|WP_145373624.1|83252_84218_+|hypothetical-protein
MKLRIFGINERSMLESLPKTKLSAEWVDDETHRWIDIEDATADELKEVFAPYKLPASILTACLASERTARFISRRDAFYLEVPTHLGWDVYPKPYVSILYLPTTVISIHRDVVHSIEDVIDDLNEEVQLFERSASALLYHLLTSIGKKNLDAALDVRSEAEELAMELDRDPERIDPQQIAEMRRKISHHATVHDDHTYCAGVLRTVESKSLQFTGTSRLFSEQLHLAEMSGQMIAGAQSRVADLQGTYDATVQQKVENRLRMLTLLSAIFLPLTLISGIYGMNFTDLPGMGIPTGYLIVIGIMLATVFGMGLYLKRNGWFD
>NZ_CP036276.1|WP_145380480.1|84393_85464_-|3-isopropylmalate-dehydrogenase
MDANIVLLPGDGIGPEIIEQGQLVLEAVAKRFGHSFQFTSCPMGGNAIDSHGTPLPDETLAACRNADAILLGAVGGPKWDDPNAKTRPEAGLLSLRKELKLFANLRPIKPYKQLIDASPLKREIIEGTDILFLRELTGGIYFGDSGVKPHASGEEAYSMMVYNTEEVARIVRLAAKAAQLRSGRVTSVDKANVLEVSRLWRRVAAQVMADEFPDIEYDVVLVDAMAMHLISRPRDFDVVVTGNMFGDILTDEGSMLPGSLGMLPSASLGESGPGLYEPIHGSAPDIAGKGIANPLATILAAAMALHHSLGLTEEAAVIDAAVEAVLDAGHRTADIAAGGNSLSTEQMGAAVLEVLG

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Crispr_ID: NZ_CP036276_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036276_2

2520005-2520104

Orphan

Consensus_repeat	Method
CAAATTAGTGATGCGGGGCTTGAGCAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP036276_2

>merge|NZ_CP036276|2|2520005-2520104|CRISPRCasFinder
CCGGTTGGCAATGCCGGGCTTGAGCATCTCCAAGGGTTGGCCAACCTTGAAGATCTAGATCTCAACAATACCCAAGTCAGTGATGCAGGTCTTGAGTCGC

>NZ_CP036276|2|2|2520005-2520104|CRISPRCasFinder
CCGGTTGGCAATGCCGGGCTTGAGCAT	CTCCAAGGGTTGGCCAACCTTGAAGATCTAGATCTCAACAATACC
CAAGTCAGTGATGCAGGTCTTGAGTCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036276.1\|WP_145375716.1\|2516351_2517068_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275381
NZ_CP036276.1\|WP_145375741.1\|2534950_2536366_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225747
NZ_CP036276.1\|WP_145375722.1\|2519123_2519678_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275378
NZ_CP036276.1\|WP_145375730.1\|2523109_2523940_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368014
NZ_CP036276.1\|WP_145375735.1\|2527734_2530776_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|224441
NZ_CP036276.1\|WP_145375732.1\|2524184_2525669_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|293754
NZ_CP036276.1\|WP_145375706.1\|2510367_2511597_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP036276.1\|WP_145375726.1\|2520690_2521461_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275381
NZ_CP036276.1\|WP_145375710.1\|2512329_2513568_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|234571
NZ_CP036276.1\|WP_145375712.1\|2513711_2514494_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP036276.1\|WP_145375738.1\|2532480_2533635_-\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP036276.1\|WP_145375728.1\|2521784_2522759_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP036276.1\|WP_145375739.1\|2533923_2534802_-\|creatininase-family-protein	unknown	unknown	gnl\|CDD\|376872
NZ_CP036276.1\|WP_145375733.1\|2526251_2527418_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036276.1\|WP_145375714.1\|2514815_2516312_+\|rhamnulokinase	unknown	unknown	gnl\|CDD\|198349
NZ_CP036276.1\|WP_145375720.1\|2518248_2519091_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275381
NZ_CP036276.1\|WP_145375705.1\|2509590_2509887_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036276.1\|WP_145375718.1\|2517085_2518216_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380193
NZ_CP036276.1\|WP_145375736.1\|2531281_2532103_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036276.1\|WP_145375708.1\|2511765_2512035_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP036276.1\|WP_145375716.1\|2516351_2517068_+\|hypothetical-protein	gnl\|CDD\|275381	sd00034, LRR_AMN1, leucine-rich repeats, antagonist of mitotic exit network protein 1-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	2.56327e-16
NZ_CP036276.1\|WP_145375741.1\|2534950_2536366_-\|hypothetical-protein	gnl\|CDD\|225747	COG3206, GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane].	5.9025e-09
NZ_CP036276.1\|WP_145375722.1\|2519123_2519678_+\|hypothetical-protein	gnl\|CDD\|275378	sd00031, LRR_1, leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	2.5467e-07
NZ_CP036276.1\|WP_145375730.1\|2523109_2523940_+\|hypothetical-protein	gnl\|CDD\|368014	pfam04592, SelP_N, Selenoprotein P, N terminal region. SelP is the only known eukaryotic selenoprotein that contains multiple selenocysteine (Sec) residues, and accounts for more than 50% of the selenium content of rat and human plasma. It is thought to be glycosylated. SelP may have antioxidant properties. It can attach to epithelial cells, and may protect vascular endothelial cells against peroxynitrite toxicity. The high selenium content of SelP suggests that it may be involved in selenium intercellular transport or storage. The promoter structure of bovine SelP suggest that it may be involved in countering heavy metal intoxication, and may also have a developmental function. The N-terminal region of SelP can exist independently of the C terminal region. Zebrafish selenoprotein Pb lacks the C terminal Sec-rich region, and a protein encoded by the rat SelP gene and lacking this region has also been reported. N-terminal region contains a conserved SecxxCys motif, which is similar to the CysxxCys found in thioredoxins. It is speculated that the N terminal region may adopt a thioredoxin fold and catalyze redox reactions. The N-terminal region also contains a His-rich region, which is thought to mediate heparin binding. Binding to heparan proteoglycans could account for the membrane binding properties of SelP. The function of the bacterial members of this family is uncharacterized.	8.25908e-05
NZ_CP036276.1\|WP_145375735.1\|2527734_2530776_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|224441	COG1524, COG1524, Uncharacterized proteins of the AP superfamily [General function prediction only].	3.16357e-17
NZ_CP036276.1\|WP_145375732.1\|2524184_2525669_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|293754	cd16030, iduronate-2-sulfatase, iduronate-2-sulfatase. Iduronate 2-sulfatase is a sulfatase enzyme that catalyze the hydrolysis of sulfate ester bonds from a wide variety of substrates, including steroids, carbohydrates and proteins. Iduronate 2-sulfatase is required for the lysosomal degradation of heparan sulfate and dermatan sulfate. Mutations in the iduronate 2-sulfatase gene that result in enzymatic deficiency lead to the sex-linked mucopolysaccharidosis type II, also known as Hunter syndrome.	0
NZ_CP036276.1\|WP_145375706.1\|2510367_2511597_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.60875e-18
NZ_CP036276.1\|WP_145375726.1\|2520690_2521461_+\|hypothetical-protein	gnl\|CDD\|275381	sd00034, LRR_AMN1, leucine-rich repeats, antagonist of mitotic exit network protein 1-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	3.23395e-15
NZ_CP036276.1\|WP_145375710.1\|2512329_2513568_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP036276.1\|WP_145375712.1\|2513711_2514494_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.52744e-70
NZ_CP036276.1\|WP_145375738.1\|2532480_2533635_-\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	7.71656e-120
NZ_CP036276.1\|WP_145375739.1\|2533923_2534802_-\|creatininase-family-protein	gnl\|CDD\|376872	pfam02633, Creatininase, Creatinine amidohydrolase. Creatinine amidohydrolase (EC:3.5.2.10), or creatininase, catalyzes the hydrolysis of creatinine to creatine.	1.24289e-69
NZ_CP036276.1\|WP_145375714.1\|2514815_2516312_+\|rhamnulokinase	gnl\|CDD\|198349	cd07771, FGGY_RhuK, L-rhamnulose kinases; a subfamily of the FGGY family of carbohydrate kinases. This subfamily is predominantly composed of bacterial L-rhamnulose kinases (RhuK, also known as rhamnulokinase; EC 2.7.1.5), which are encoded by the rhaB gene and catalyze the ATP-dependent phosphorylation of L-rhamnulose to produce L-rhamnulose-1-phosphate and ADP. Some uncharacterized homologous sequences are also included in this subfamily. The prototypical member of this subfamily is Escherichia coli RhuK, which exists as a monomer composed of two large domains. The ATP binding site is located in the cleft between the two domains. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of divalent Mg2+ or Mn2+ is required for catalysis. Although an intramolecular disulfide bridge is present in Rhuk, disulfide formation is not important to the regulation of RhuK enzymatic activity. Members of this subfamily belong to the FGGY family of carbohydrate kinases.	0
NZ_CP036276.1\|WP_145375720.1\|2518248_2519091_+\|hypothetical-protein	gnl\|CDD\|275381	sd00034, LRR_AMN1, leucine-rich repeats, antagonist of mitotic exit network protein 1-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	1.34319e-23
NZ_CP036276.1\|WP_145375718.1\|2517085_2518216_+\|hypothetical-protein	gnl\|CDD\|380193	NF033189, internalin_A, class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.	1.92413e-27
NZ_CP036276.1\|WP_145375728.1\|2521784_2522759_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	0.00523078

>NZ_CP036276.1|WP_145375722.1|2519123_2519678_+|hypothetical-protein
MTETTPKSRLPRTGTLVVIAIVLLVGCGMMMVWVPYHRNQTAIAEIARLGGRTESEFAPPLWIPDVLASEIMPLFERVYHIDLTETHITDEDLGNFQGLTNLKILWLDNTQVGDVGLQHVGGLTDCSQLSLHNTPVGDDGMEHLRGLKNLHVLWLHHTHVTETGFKRLQAALPECQIHWRPSTP
>NZ_CP036276.1|WP_145375720.1|2518248_2519091_+|hypothetical-protein
MTKTTPQSRLPRTGIMLILAVVLLIGGGALMVWVPYQREQTVIAEIEKLGGEIQAEIIRPAWIPDVVDDEYLWVFERVDYIDLSDTQVSNAGLRNLQELKNLRTLWLGNTQVGDAGLEHLQALTSLYNLSLNDLRVSDAGLKHLRGLTNLYWVSLDGTQVSDAGLVHLRRLTKLNNLYLDNTQVTDAGIERLRGLVQLHCLSFNNTQVTDAGLEGLKGRTELTNLDLDYTRVSDAGLEHLRELPNIKSLSLEYTQVTKAGIEKLKETHPNCIIDWIQSAE
>NZ_CP036276.1|WP_145375718.1|2517085_2518216_+|hypothetical-protein
MTKTTPQSRLPRTSIMLLIAVVLLVGGGALMVWLPYHQEQRAIAEIERHDGLFLSEVIRPAWIPSAVDVEYLEVLERVTEIYLSDTQVSDAGLEHLQGLTKLEYLHLDNTQVSDAGLEHLRGLTNLESLDFGNTQVSDTGLKHLQGLTKLEYLHLDNTQVSDAGLEHLRGLTNLESLDFGNTQVSDTGLKHLQGLTKLEYLHLDNTQVSDAGLEHLRSLTNLESLDFGNTQVSDAGLKYLHGLPNLWELDLRNTQVTDAGLEKLRGLTKLKELSLAMTQVSEEGLQKLRGLTKLKNLDLRDTQVGDEGLAQLPGATKLENLWLDDTQVSDAGVDHLRGLTNLQLLTLHNTQVTRAGIEKLQKSLPDCEIYWTPPAE
>NZ_CP036276.1|WP_145375716.1|2516351_2517068_+|hypothetical-protein
MTKTTNKSRLPRTGTLMLIAVVLLIGGGGVMVWVPYHRNQTVISEVENLGGTTESKIIRPFWVPNAVDDEHLKPFERVWQVDLHDTQISDVGLESLRGITSLVTLRLENTQISDASLENLRGLTNLENLALTNTQVSDAGLEHLRGLTNLQHLSLTNNHVSDAGLEHLRELTKLSGLKLERAQVSDSGLEHLHGLTNLETLNLFFTTEVTRAGIKKLQKALPGCKIGWIPTAEYHETP
>NZ_CP036276.1|WP_145375714.1|2514815_2516312_+|rhamnulokinase
MSTPCYLAVDLGAASGRVIAGHVENGQVTLEELHRFPNGAVNVAGTLRWDVLALWNEIQNGLTIAAEKFGKDIVSVGVDTWGVDYVLLGQGDELLGLPYHYRDARTDNIMDVALSHVPRHKIFEQTGLQFLPFNTLFQLVAMRHAQPRILDAAERLLLMPDFFHWLLSGSQVIEFTNATTTQCLDPNTGTWADDLLRKFEIPTNIFPEIVPTGTKLGTLRGEVAHKTGLGRINVVAPATHDTGAAIAAIPTQHTGQPNWAYISSGTWSLMGVEVPEAIVSHRALELNVTNEGGIDGTYRLLKNIAGLWLVQESRRAFAQQGKSLDYEQLQNLARDAQPFRSLLDPDDSAFLAPDDMPTAIAAYCSGTGQPEPETEGQIVRCALESLALKYRMVLGWLEELTGVTTEVIHIVGGGTQNALLCQFAANACRRPVVAGPVEATALGNVLIQARTDGAVGSLSDIRKVVARSVELKHYQPDNVDAWDEAYRRYHDLLAIPRR
>NZ_CP036276.1|WP_145375712.1|2513711_2514494_-|SDR-family-oxidoreductase
MKFDGKAALVTGASLGIGRAAAIELAQHGANVAVNYRSSEAEAQEVADEIESLGRKALLLKADVADQAAVEGMVAKTVEAFGSLDLFVSNAAYSDRQSMIDADMAGFHRTIDVTMWGAFYGVRASAMQMIKQGGGGSIVVVSSPHAALAIPDSMAYNMAKAAIDHMMRTAAIELVGHRIRVNAIYPGWIDTPGERKFFTEEQLEAGGKALPWGRLGRPEEIAKGIAFMLSDDAEYMTGSIMSMEGGVMLPWWSNRADGEM
>NZ_CP036276.1|WP_145375710.1|2512329_2513568_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MSALQTTDPEIYQAVQDEQTRQRDGLELIASENYTSAAVMEAAGTVLTNKYAEGYPGRRYYGGCEYADVIEDLARDRVCKLFGAEHANVQPHSGSQANMAVYLTVLKPGDTYLAMDLAHGGHLTHGMHLNFSGQLYNPVHYGVRESDHRIDFDQVATLAREHKPKLIIAGASAYPREVDHPKFAEIAREVGALLMVDMAHYSGLVAGGVHNNPVEVADYVTSTSHKTLRGPRSGFILTKEANAKDIDRTIFPGIQGGPLVHIVAGKAVCFLEASQPEFKTYAQQIVANAKVLAEVLMAGGISLASGGTDNHLMMADVTAIGLTGKIAEKSLDRAGITVNKNMIPFDKRKPLDPSGIRIGTAALTTRGMQEDDMKKVGSWILEVLKAPEDEAVIAKVRGEIQSFASDFPVPGI
>NZ_CP036276.1|WP_145375708.1|2511765_2512035_-|hypothetical-protein
MTQPSVAELQANLQELAANMRMMSLNADEEAARCNAALASIHPENVTPVAFAELKNVTRDLSAIYVTSLVNLADNLEDLAASIGWEAQE
>NZ_CP036276.1|WP_145375706.1|2510367_2511597_-|tetratricopeptide-repeat-protein
MSENSADLTPTPPAHDGVLAEERLSFTGTLASMTHQQAHELTEKNGGVATASVSRLTTMLVIGEEGWPLEENGSPSLKLQQVSEWQHEGAAIRIVQESDWLEMLGLDRRDDEVHRQYTPAMLSQLLDVPVGVIRSWERAGLIRPVRRVFRLPYFNFQEVAGARRLAEMIADGVSKAEIQAGLAKLKHILPDIDQPLLQLELLARDKHVAYRDHGGLVETVSGQRLLDFDVPETSTAKQEPTTAEDAPRNVQTHWTADDWFEAACRHLEDQQLNEAVEAFRLCLIDDPHRPDANFQLAEVLYRLGRIDGALERYHVAVELDHNYLEAWTQLGCLHAERGEPQAALEAFDVALDVHAEYPDAHLHKAEILQQLGRIEEAIEHWQTYLKFDTRGPWADNARRRLEAAGVPVE
>NZ_CP036276.1|WP_145375705.1|2509590_2509887_-|hypothetical-protein
MSYLKLYNPDAENSGGNSEPRILKFETCVHQIRSPFQFDVLSRASVIYKNKNCRHCGAPAVTPVESEDIMLSRGGLPIPGSGTLVGFRCESCSKQWPA
>NZ_CP036276.1|WP_145375726.1|2520690_2521461_+|hypothetical-protein
MTETTPKRRRPRKRVILLIVVLLAVSSAVLAVWWPYYCEQVAIAKIDELGGLTRTGIVRPRWIPEAVDDRYLVLFERIDAISLSVPQVGDAELEQFRKLTNLQILILNNTQVGDAGLARLRKRKKIWDLSLDQTQVTDAGLEHLRELPNLQWLSLKNTQVSDAGLKHLQGLSKLQLLSLDETQVTDAGLAHLKGLNKLVALSLNNTQIGDVGVESLGELKTLRYLSVCNTQVTRDGYWALRLALHGCDIRWTPPAK
>NZ_CP036276.1|WP_145375728.1|2521784_2522759_+|hypothetical-protein
MRQIFIRLTTTLCVATALLCTATTTPAADDLFSSDSLKQVFNPAPPQNATPPSPPQQSPVQPVPPQQPPTQTQPPSRALDPAEIPNFLMLMGYQSEDLGDGVFKTTLKKGEWNLPYAFVISPNKAQFWVTLSLNTLQEGVSIPAEKMQKMLNFNHQYGPIHFAYSEKTRRIYVCRALENDGLNPAEVKKVIEVLAELAINNEDLWNHTKWQTAQQPQVQQQTPQAPVQQQPTPAHVGTWRSTAPDNSTFQLTLNADGSFVLYHVHGSKTDKSVGRYTLAGNSLTLLMTETDKLEAYFTWYNNGTWRFLMKDAQPGAQGLLFAKA
>NZ_CP036276.1|WP_145375730.1|2523109_2523940_+|hypothetical-protein
MKTLIHLTAVVCLLTLSSVAEADSKTGGRRGGGQRGHHGRRHHGRHHGRHHGHHRGHHHGRHYGDYYGYGPRGGFVSDPFAPIDEGFVVDPLVGEAEVIRSLGEFNRNTSEALINLEEARQKAIENHRLSVETRYELKRQWRERQNARLSRRRRPQPRDGEARPKTENRLDDDEFNRLTGEIEWPEVLLDTQFEDYRIAFEQIFANPTTKESGAGTNLHRDVNELASYMREQLRFQVADMSAADYIAAKKFIDRLLNEARSTEVQVNSDSAITALK
>NZ_CP036276.1|WP_145375732.1|2524184_2525669_+|sulfatase-like-hydrolase/transferase
MRVSLVLLFGVLFAIVADAGTLAAADADKPNVLFLICDDLNCDLGCYGHPQVKSPNIDRLAQRGVRFSNAYCQYPLCGPSRASFMTGLYPDQTLIHRNSIYIRETVPNVKTMSQMFRSEGHFATRIGKIYHYGVPRHIGTSGHDDPFSWDYTINPRGRDKDEEDLIFSLIPGQFGGTMSWLAAEGTDEEQTDGIAATNATELLQTYAADKRQFYLAVGLYRPHTPYVAPKKYFDMYPLDKIRVPTVPDGYLDTLPKPAVRAIRRKKQNSNLPDKLARQAIQAYYASITFADAQVGRILDALDEAGLSDNTIVLFTSDHGYHMGEHGHYQKTTLFENAARVPLIIAGPGVTAKGAITSALAEMVDFYPTLAEMTGLTTPDYLPGVSLVPVLKDPTQTPRDSALTQYDSGYSIRTPRYRYTHWGPDGEDGAELYDHQTDPEEMVNLANKPEFAELALQLSKQLKERIADAKRKPPGVNQIQNRKTRRVPRSKIGPR
>NZ_CP036276.1|WP_145375733.1|2526251_2527418_-|hypothetical-protein
MPRLLYGNFDFEHHLTGAGAPSPDSKLGRINAELTPALIALADEEDYLWCPAPFDESHLNDLTAAGMPRPRLVTAGASLPRDLSLVPWGWSDVALKLATQTGASAEHPPLEVVKQANCRRVAYELETRWNCGLDGAAEICHLDELARVIEQSANFSLGWVLKARFGMSGRERHLGSGVEVETPTINWAKKRLARDGAVLFEPWVQRIDEAGLQFEIPRDGEPQLLGITPQLCDATGHYRGSRLTISAAAATAWQTAVDVGRRLAVHMQQTGYFGPLGIDAMRYRDQQGEIRIRPLQDINARLTMGRLAWGFRRCLVPGEAGAWLHFPFQPLEGSEDSPWEHIRRKLPADCRIIPTSPATIGGQPPKLMHLIVAAPTESALADVEQLLV
>NZ_CP036276.1|WP_145375735.1|2527734_2530776_+|sulfatase-like-hydrolase/transferase
MLLTHAAERALLHKTTAALGVVVCLWLCALSSGCHHDVAVPELTCDMRGVSGDALVVPANAQWVDSGMDVQSGESVTLVAHGRIRHLIPQTEQEIEKSEAGPAGTFFYDDSQGHQEFPLPAAGSGPAPCYCLIGRIGEGRPFFVGDGMSIAAESTGRLYLGVNDFDVSDNTGEFYVEVSKPDTVQPVSFRQDVRRDAPEGLPAAGCSVVVFYVDGLRPDVLEEMSAMHHVPHLTEHFIDGGTHMRNTFTAFPSDTITSNGTMWTGCFSDRHGIKGQIRFSRQRLESESGLDPMGPSRTSRLLRPHGTDKLIHNAQAATVGYFEGNEAEIRWKSSKRTGIPAVYDYLRVEGNDWATGVLPIMTDAPPSMWTRSLARHLPYFQAHQAWQYIDDANAHFAVRHLLNREQPLTVIWLPETDSVSHKYCRGQFGTTRKTIAMADVLVGDVTEELRAQGRLQNTYLVLVSDHGHLGGRKTHLTRYDLVHELFFREREVTADGRWVGGGLGLSVRQHRLENWHTGDTKDKMVYVDGNSDGAARIFLPRGNYQSGDWNGPNRPADLLAYQIAPHLPAVDLPQYIVSSRAVNHAGEEQNPVDLALMKLDDRSILITTADRGQAIIDRRQRKKGGWEYRYTVVDNVRPGANGAAEFDVVENPKTDPLKLLQEVWPQYFTYYHDEEKWLQLTAPTEYPDGVVTLTRHMLWQDHLKVREQEYAPDLVVTARHGWFFGTQNTPGTTHGYPLADAVRATWYLSGPNIRRGARIHEPARLADLTPTILTMASVNTRPEWFEGTVRRTVFATAAAEPSADDTPVHWRDVDLQAWDKLDYAPVPEFDRQPITVNRPGSPWDVNNIAYNALTVGDWSVFRLVDDALAPGKDKKKPVTETVDSIERRGRRSRHKWVAEGTHALNVSEVSLSDYSLTSSGNMYRANGVVDWLQNRGTRLDEKISDKVGRNTVLGAPKVNRAVDGVQDGYWDVYKYVQRLMVEVLDETVLNGLENNVDRAINASRKTPPEILVQ
>NZ_CP036276.1|WP_145375736.1|2531281_2532103_-|hypothetical-protein
MAESPTIWETIRTWRRDLRQWATGPEGLSLVVSAGVHVLLFLGIALMLFLFGLRLEDHPGDRGPINALFTETSVDKKLPLESLADTEFELTDTLADASELSSLNSESITDNVRFVPDTVLSDFGDTAATLPALPQNALDMVNEGGGNGKSWKRGGFAMPTNKGKVITQGSFSVWTVPEDPEPFKSYKIVIQLNRLVPIRDLRADVTGTVTGTDGYRASIGRVQKGIHFPRQLVIPKARQIAIEIPPAKFELVRDIIEVHSKKLDEKQRIEIVF
>NZ_CP036276.1|WP_145375738.1|2532480_2533635_-|A/G-specific-adenine-glycosylase
MKSSDTDLLAEFDADWRQRFRGQLRRWYARYGRELPWRNSRDPYRVWISEIMLQQTTVTAVVPFFKRFLARFPDVSTLAAGEENDVLRMWEGLGYYSRARNIHKAARIIVADFGGEFPKDVAALESLPGIGRYTAGAIVSFAYDRPAAIVEANTLRLYSRLLGYEQDPRSSSGQRLLWQFAESILPRKQPGTFNQALMDLGATVCTPVDPQCLACPVKSGCRAFQSGSQDRIPVPQKRPELTDVTEAAVAIVHNEEYLLCRRPHGERWAGLWDFPRFATSEFSAPHNGRDLRKIRGELEGHLKTQLGLAAHVEDLLKQFRHSVTRYRIQLLCFTGRLANTTTQPNAEEYAWVCPSDFHEYPLSVTGRKFADILVNKRSELPFID
>NZ_CP036276.1|WP_145375739.1|2533923_2534802_-|creatininase-family-protein
MSSRAETEYRYEKLTWPEINDAVDLGKVCIIPVGAVEQHGPHLPLDVDLVCPGGVAHGAGQEMTDKILVLPTIPYGYTGHVMDFPGTINTHYETFIRQVLDVTKSLAYHGFKKIILLNGHGSNMPNLDLAARRTNLETDAECVLAAWWQLLTVDPEFIPSWRESKFPGGCAHAGELETSMYMYLDGDNVRTDLIKNGVISFNEEESPFNWVDVFSAGPATLVSWTSSYSDTGVLGEAELATAEKGERVYREAVKQLCAFVNYFGPRPKDQRGRHQRHAPTMPLPWGQRPIED
>NZ_CP036276.1|WP_145375741.1|2534950_2536366_-|hypothetical-protein
MKMKFKLNLHKIIRKPWAAAIAVLGVCLIHYLTATTVLETTVNVKPHDQPVDPKSMSEIPEAVFDHAFAALDAQRTKAGKPLLDLNAVAQQLSVSFNEENQTLQLRCLSQDAGEAESILNALADGYVENSRQLKSSVALPRIEQLKENNQEAQQQLQAGKTTIAAIKNQMDEESLSETAQMASMERIKSFSAQIVEAKADRLDAENRYHEASQELETGSAVNLVAAQLSTGSAKEIVQAVMSHADLVDELQQLRQTEREYSQYYGARHPRMIEIQSKQAELLRQIDDLSETGSGIQQISTIDQPDQNDRRALLLRTLAMDLRQKQTREDDLQDQWDLEQARIIRHSELQDRLQKAQLETQAAENKLESIKAKIATTTTGHKAHAVILAPASTATEPVSPSFWGHLLWGCLAAVAVGLLSRWAFKDLKQGTASSTTPLSSSTETAETSTQPPLYARRLMRLAKLNRNQEATS

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Crispr_ID: NZ_CP036276_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036276_3

2520221-2520535

Orphan

Consensus_repeat	Method
CAAATTAGTGATGCGGGGCTTGAGCAT	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP036276_3

>merge|NZ_CP036276|3|2520221-2520535|CRISPRCasFinder
CAAGTCGGCGATGCGGGGCTTGAGCATCTCGGGGGGGTAAAGAACCTGAGAGTTCTATCGCTGGAAAATACCCAAGTTAGCGACGCTGGGCTTGATCATCTTCGAGGATTGTCAAATCTAAACAGTCTAAATCTCAACGATACCCGAGTCAGCGACGTTGGACTTGAGCATCTTCAAAAATTGCCCCAACTAGTACAACTTACGCTCGATAACACCCAAATTAGTGATGCGGGGCTTGAGCATGTTCATGGGTTTCCCCAACTTGATCAGCTATCGCTCAACAACACACAAATCAGTGATGCGGGGCTTGAGCAT

>NZ_CP036276|3|3|2520221-2520535|CRISPRCasFinder
CAAGTCGGCGATGCGGGGCTTGAGCAT	CTCGGGGGGGTAAAGAACCTGAGAGTTCTATCGCTGGAAAATACC
CAAGTTAGCGACGCTGGGCTTGATCAT	CTTCGAGGATTGTCAAATCTAAACAGTCTAAATCTCAACGATACC
CGAGTCAGCGACGTTGGACTTGAGCAT	CTTCAAAAATTGCCCCAACTAGTACAACTTACGCTCGATAACACC
CAAATTAGTGATGCGGGGCTTGAGCAT	GTTCATGGGTTTCCCCAACTTGATCAGCTATCGCTCAACAACACA
CAAATCAGTGATGCGGGGCTTGAGCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036276.1\|WP_145375716.1\|2516351_2517068_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275381
NZ_CP036276.1\|WP_145375741.1\|2534950_2536366_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225747
NZ_CP036276.1\|WP_145375722.1\|2519123_2519678_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275378
NZ_CP036276.1\|WP_145375730.1\|2523109_2523940_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368014
NZ_CP036276.1\|WP_145375735.1\|2527734_2530776_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|224441
NZ_CP036276.1\|WP_145375732.1\|2524184_2525669_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|293754
NZ_CP036276.1\|WP_145375706.1\|2510367_2511597_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP036276.1\|WP_145375726.1\|2520690_2521461_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275381
NZ_CP036276.1\|WP_145375710.1\|2512329_2513568_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|234571
NZ_CP036276.1\|WP_145375712.1\|2513711_2514494_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP036276.1\|WP_145375738.1\|2532480_2533635_-\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP036276.1\|WP_145375728.1\|2521784_2522759_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP036276.1\|WP_145375739.1\|2533923_2534802_-\|creatininase-family-protein	unknown	unknown	gnl\|CDD\|376872
NZ_CP036276.1\|WP_145375733.1\|2526251_2527418_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036276.1\|WP_145375714.1\|2514815_2516312_+\|rhamnulokinase	unknown	unknown	gnl\|CDD\|198349
NZ_CP036276.1\|WP_145375720.1\|2518248_2519091_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275381
NZ_CP036276.1\|WP_145375705.1\|2509590_2509887_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036276.1\|WP_145375718.1\|2517085_2518216_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380193
NZ_CP036276.1\|WP_145375736.1\|2531281_2532103_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036276.1\|WP_145375708.1\|2511765_2512035_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP036276.1\|WP_145375716.1\|2516351_2517068_+\|hypothetical-protein	gnl\|CDD\|275381	sd00034, LRR_AMN1, leucine-rich repeats, antagonist of mitotic exit network protein 1-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	2.56327e-16
NZ_CP036276.1\|WP_145375741.1\|2534950_2536366_-\|hypothetical-protein	gnl\|CDD\|225747	COG3206, GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane].	5.9025e-09
NZ_CP036276.1\|WP_145375722.1\|2519123_2519678_+\|hypothetical-protein	gnl\|CDD\|275378	sd00031, LRR_1, leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	2.5467e-07
NZ_CP036276.1\|WP_145375730.1\|2523109_2523940_+\|hypothetical-protein	gnl\|CDD\|368014	pfam04592, SelP_N, Selenoprotein P, N terminal region. SelP is the only known eukaryotic selenoprotein that contains multiple selenocysteine (Sec) residues, and accounts for more than 50% of the selenium content of rat and human plasma. It is thought to be glycosylated. SelP may have antioxidant properties. It can attach to epithelial cells, and may protect vascular endothelial cells against peroxynitrite toxicity. The high selenium content of SelP suggests that it may be involved in selenium intercellular transport or storage. The promoter structure of bovine SelP suggest that it may be involved in countering heavy metal intoxication, and may also have a developmental function. The N-terminal region of SelP can exist independently of the C terminal region. Zebrafish selenoprotein Pb lacks the C terminal Sec-rich region, and a protein encoded by the rat SelP gene and lacking this region has also been reported. N-terminal region contains a conserved SecxxCys motif, which is similar to the CysxxCys found in thioredoxins. It is speculated that the N terminal region may adopt a thioredoxin fold and catalyze redox reactions. The N-terminal region also contains a His-rich region, which is thought to mediate heparin binding. Binding to heparan proteoglycans could account for the membrane binding properties of SelP. The function of the bacterial members of this family is uncharacterized.	8.25908e-05
NZ_CP036276.1\|WP_145375735.1\|2527734_2530776_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|224441	COG1524, COG1524, Uncharacterized proteins of the AP superfamily [General function prediction only].	3.16357e-17
NZ_CP036276.1\|WP_145375732.1\|2524184_2525669_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|293754	cd16030, iduronate-2-sulfatase, iduronate-2-sulfatase. Iduronate 2-sulfatase is a sulfatase enzyme that catalyze the hydrolysis of sulfate ester bonds from a wide variety of substrates, including steroids, carbohydrates and proteins. Iduronate 2-sulfatase is required for the lysosomal degradation of heparan sulfate and dermatan sulfate. Mutations in the iduronate 2-sulfatase gene that result in enzymatic deficiency lead to the sex-linked mucopolysaccharidosis type II, also known as Hunter syndrome.	0
NZ_CP036276.1\|WP_145375706.1\|2510367_2511597_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	4.60875e-18
NZ_CP036276.1\|WP_145375726.1\|2520690_2521461_+\|hypothetical-protein	gnl\|CDD\|275381	sd00034, LRR_AMN1, leucine-rich repeats, antagonist of mitotic exit network protein 1-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	3.23395e-15
NZ_CP036276.1\|WP_145375710.1\|2512329_2513568_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP036276.1\|WP_145375712.1\|2513711_2514494_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.52744e-70
NZ_CP036276.1\|WP_145375738.1\|2532480_2533635_-\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	7.71656e-120
NZ_CP036276.1\|WP_145375739.1\|2533923_2534802_-\|creatininase-family-protein	gnl\|CDD\|376872	pfam02633, Creatininase, Creatinine amidohydrolase. Creatinine amidohydrolase (EC:3.5.2.10), or creatininase, catalyzes the hydrolysis of creatinine to creatine.	1.24289e-69
NZ_CP036276.1\|WP_145375714.1\|2514815_2516312_+\|rhamnulokinase	gnl\|CDD\|198349	cd07771, FGGY_RhuK, L-rhamnulose kinases; a subfamily of the FGGY family of carbohydrate kinases. This subfamily is predominantly composed of bacterial L-rhamnulose kinases (RhuK, also known as rhamnulokinase; EC 2.7.1.5), which are encoded by the rhaB gene and catalyze the ATP-dependent phosphorylation of L-rhamnulose to produce L-rhamnulose-1-phosphate and ADP. Some uncharacterized homologous sequences are also included in this subfamily. The prototypical member of this subfamily is Escherichia coli RhuK, which exists as a monomer composed of two large domains. The ATP binding site is located in the cleft between the two domains. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of divalent Mg2+ or Mn2+ is required for catalysis. Although an intramolecular disulfide bridge is present in Rhuk, disulfide formation is not important to the regulation of RhuK enzymatic activity. Members of this subfamily belong to the FGGY family of carbohydrate kinases.	0
NZ_CP036276.1\|WP_145375720.1\|2518248_2519091_+\|hypothetical-protein	gnl\|CDD\|275381	sd00034, LRR_AMN1, leucine-rich repeats, antagonist of mitotic exit network protein 1-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	1.34319e-23
NZ_CP036276.1\|WP_145375718.1\|2517085_2518216_+\|hypothetical-protein	gnl\|CDD\|380193	NF033189, internalin_A, class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.	1.92413e-27
NZ_CP036276.1\|WP_145375728.1\|2521784_2522759_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	0.00523078

>NZ_CP036276.1|WP_145375722.1|2519123_2519678_+|hypothetical-protein
MTETTPKSRLPRTGTLVVIAIVLLVGCGMMMVWVPYHRNQTAIAEIARLGGRTESEFAPPLWIPDVLASEIMPLFERVYHIDLTETHITDEDLGNFQGLTNLKILWLDNTQVGDVGLQHVGGLTDCSQLSLHNTPVGDDGMEHLRGLKNLHVLWLHHTHVTETGFKRLQAALPECQIHWRPSTP
>NZ_CP036276.1|WP_145375720.1|2518248_2519091_+|hypothetical-protein
MTKTTPQSRLPRTGIMLILAVVLLIGGGALMVWVPYQREQTVIAEIEKLGGEIQAEIIRPAWIPDVVDDEYLWVFERVDYIDLSDTQVSNAGLRNLQELKNLRTLWLGNTQVGDAGLEHLQALTSLYNLSLNDLRVSDAGLKHLRGLTNLYWVSLDGTQVSDAGLVHLRRLTKLNNLYLDNTQVTDAGIERLRGLVQLHCLSFNNTQVTDAGLEGLKGRTELTNLDLDYTRVSDAGLEHLRELPNIKSLSLEYTQVTKAGIEKLKETHPNCIIDWIQSAE
>NZ_CP036276.1|WP_145375718.1|2517085_2518216_+|hypothetical-protein
MTKTTPQSRLPRTSIMLLIAVVLLVGGGALMVWLPYHQEQRAIAEIERHDGLFLSEVIRPAWIPSAVDVEYLEVLERVTEIYLSDTQVSDAGLEHLQGLTKLEYLHLDNTQVSDAGLEHLRGLTNLESLDFGNTQVSDTGLKHLQGLTKLEYLHLDNTQVSDAGLEHLRGLTNLESLDFGNTQVSDTGLKHLQGLTKLEYLHLDNTQVSDAGLEHLRSLTNLESLDFGNTQVSDAGLKYLHGLPNLWELDLRNTQVTDAGLEKLRGLTKLKELSLAMTQVSEEGLQKLRGLTKLKNLDLRDTQVGDEGLAQLPGATKLENLWLDDTQVSDAGVDHLRGLTNLQLLTLHNTQVTRAGIEKLQKSLPDCEIYWTPPAE
>NZ_CP036276.1|WP_145375716.1|2516351_2517068_+|hypothetical-protein
MTKTTNKSRLPRTGTLMLIAVVLLIGGGGVMVWVPYHRNQTVISEVENLGGTTESKIIRPFWVPNAVDDEHLKPFERVWQVDLHDTQISDVGLESLRGITSLVTLRLENTQISDASLENLRGLTNLENLALTNTQVSDAGLEHLRGLTNLQHLSLTNNHVSDAGLEHLRELTKLSGLKLERAQVSDSGLEHLHGLTNLETLNLFFTTEVTRAGIKKLQKALPGCKIGWIPTAEYHETP
>NZ_CP036276.1|WP_145375714.1|2514815_2516312_+|rhamnulokinase
MSTPCYLAVDLGAASGRVIAGHVENGQVTLEELHRFPNGAVNVAGTLRWDVLALWNEIQNGLTIAAEKFGKDIVSVGVDTWGVDYVLLGQGDELLGLPYHYRDARTDNIMDVALSHVPRHKIFEQTGLQFLPFNTLFQLVAMRHAQPRILDAAERLLLMPDFFHWLLSGSQVIEFTNATTTQCLDPNTGTWADDLLRKFEIPTNIFPEIVPTGTKLGTLRGEVAHKTGLGRINVVAPATHDTGAAIAAIPTQHTGQPNWAYISSGTWSLMGVEVPEAIVSHRALELNVTNEGGIDGTYRLLKNIAGLWLVQESRRAFAQQGKSLDYEQLQNLARDAQPFRSLLDPDDSAFLAPDDMPTAIAAYCSGTGQPEPETEGQIVRCALESLALKYRMVLGWLEELTGVTTEVIHIVGGGTQNALLCQFAANACRRPVVAGPVEATALGNVLIQARTDGAVGSLSDIRKVVARSVELKHYQPDNVDAWDEAYRRYHDLLAIPRR
>NZ_CP036276.1|WP_145375712.1|2513711_2514494_-|SDR-family-oxidoreductase
MKFDGKAALVTGASLGIGRAAAIELAQHGANVAVNYRSSEAEAQEVADEIESLGRKALLLKADVADQAAVEGMVAKTVEAFGSLDLFVSNAAYSDRQSMIDADMAGFHRTIDVTMWGAFYGVRASAMQMIKQGGGGSIVVVSSPHAALAIPDSMAYNMAKAAIDHMMRTAAIELVGHRIRVNAIYPGWIDTPGERKFFTEEQLEAGGKALPWGRLGRPEEIAKGIAFMLSDDAEYMTGSIMSMEGGVMLPWWSNRADGEM
>NZ_CP036276.1|WP_145375710.1|2512329_2513568_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MSALQTTDPEIYQAVQDEQTRQRDGLELIASENYTSAAVMEAAGTVLTNKYAEGYPGRRYYGGCEYADVIEDLARDRVCKLFGAEHANVQPHSGSQANMAVYLTVLKPGDTYLAMDLAHGGHLTHGMHLNFSGQLYNPVHYGVRESDHRIDFDQVATLAREHKPKLIIAGASAYPREVDHPKFAEIAREVGALLMVDMAHYSGLVAGGVHNNPVEVADYVTSTSHKTLRGPRSGFILTKEANAKDIDRTIFPGIQGGPLVHIVAGKAVCFLEASQPEFKTYAQQIVANAKVLAEVLMAGGISLASGGTDNHLMMADVTAIGLTGKIAEKSLDRAGITVNKNMIPFDKRKPLDPSGIRIGTAALTTRGMQEDDMKKVGSWILEVLKAPEDEAVIAKVRGEIQSFASDFPVPGI
>NZ_CP036276.1|WP_145375708.1|2511765_2512035_-|hypothetical-protein
MTQPSVAELQANLQELAANMRMMSLNADEEAARCNAALASIHPENVTPVAFAELKNVTRDLSAIYVTSLVNLADNLEDLAASIGWEAQE
>NZ_CP036276.1|WP_145375706.1|2510367_2511597_-|tetratricopeptide-repeat-protein
MSENSADLTPTPPAHDGVLAEERLSFTGTLASMTHQQAHELTEKNGGVATASVSRLTTMLVIGEEGWPLEENGSPSLKLQQVSEWQHEGAAIRIVQESDWLEMLGLDRRDDEVHRQYTPAMLSQLLDVPVGVIRSWERAGLIRPVRRVFRLPYFNFQEVAGARRLAEMIADGVSKAEIQAGLAKLKHILPDIDQPLLQLELLARDKHVAYRDHGGLVETVSGQRLLDFDVPETSTAKQEPTTAEDAPRNVQTHWTADDWFEAACRHLEDQQLNEAVEAFRLCLIDDPHRPDANFQLAEVLYRLGRIDGALERYHVAVELDHNYLEAWTQLGCLHAERGEPQAALEAFDVALDVHAEYPDAHLHKAEILQQLGRIEEAIEHWQTYLKFDTRGPWADNARRRLEAAGVPVE
>NZ_CP036276.1|WP_145375705.1|2509590_2509887_-|hypothetical-protein
MSYLKLYNPDAENSGGNSEPRILKFETCVHQIRSPFQFDVLSRASVIYKNKNCRHCGAPAVTPVESEDIMLSRGGLPIPGSGTLVGFRCESCSKQWPA
>NZ_CP036276.1|WP_145375726.1|2520690_2521461_+|hypothetical-protein
MTETTPKRRRPRKRVILLIVVLLAVSSAVLAVWWPYYCEQVAIAKIDELGGLTRTGIVRPRWIPEAVDDRYLVLFERIDAISLSVPQVGDAELEQFRKLTNLQILILNNTQVGDAGLARLRKRKKIWDLSLDQTQVTDAGLEHLRELPNLQWLSLKNTQVSDAGLKHLQGLSKLQLLSLDETQVTDAGLAHLKGLNKLVALSLNNTQIGDVGVESLGELKTLRYLSVCNTQVTRDGYWALRLALHGCDIRWTPPAK
>NZ_CP036276.1|WP_145375728.1|2521784_2522759_+|hypothetical-protein
MRQIFIRLTTTLCVATALLCTATTTPAADDLFSSDSLKQVFNPAPPQNATPPSPPQQSPVQPVPPQQPPTQTQPPSRALDPAEIPNFLMLMGYQSEDLGDGVFKTTLKKGEWNLPYAFVISPNKAQFWVTLSLNTLQEGVSIPAEKMQKMLNFNHQYGPIHFAYSEKTRRIYVCRALENDGLNPAEVKKVIEVLAELAINNEDLWNHTKWQTAQQPQVQQQTPQAPVQQQPTPAHVGTWRSTAPDNSTFQLTLNADGSFVLYHVHGSKTDKSVGRYTLAGNSLTLLMTETDKLEAYFTWYNNGTWRFLMKDAQPGAQGLLFAKA
>NZ_CP036276.1|WP_145375730.1|2523109_2523940_+|hypothetical-protein
MKTLIHLTAVVCLLTLSSVAEADSKTGGRRGGGQRGHHGRRHHGRHHGRHHGHHRGHHHGRHYGDYYGYGPRGGFVSDPFAPIDEGFVVDPLVGEAEVIRSLGEFNRNTSEALINLEEARQKAIENHRLSVETRYELKRQWRERQNARLSRRRRPQPRDGEARPKTENRLDDDEFNRLTGEIEWPEVLLDTQFEDYRIAFEQIFANPTTKESGAGTNLHRDVNELASYMREQLRFQVADMSAADYIAAKKFIDRLLNEARSTEVQVNSDSAITALK
>NZ_CP036276.1|WP_145375732.1|2524184_2525669_+|sulfatase-like-hydrolase/transferase
MRVSLVLLFGVLFAIVADAGTLAAADADKPNVLFLICDDLNCDLGCYGHPQVKSPNIDRLAQRGVRFSNAYCQYPLCGPSRASFMTGLYPDQTLIHRNSIYIRETVPNVKTMSQMFRSEGHFATRIGKIYHYGVPRHIGTSGHDDPFSWDYTINPRGRDKDEEDLIFSLIPGQFGGTMSWLAAEGTDEEQTDGIAATNATELLQTYAADKRQFYLAVGLYRPHTPYVAPKKYFDMYPLDKIRVPTVPDGYLDTLPKPAVRAIRRKKQNSNLPDKLARQAIQAYYASITFADAQVGRILDALDEAGLSDNTIVLFTSDHGYHMGEHGHYQKTTLFENAARVPLIIAGPGVTAKGAITSALAEMVDFYPTLAEMTGLTTPDYLPGVSLVPVLKDPTQTPRDSALTQYDSGYSIRTPRYRYTHWGPDGEDGAELYDHQTDPEEMVNLANKPEFAELALQLSKQLKERIADAKRKPPGVNQIQNRKTRRVPRSKIGPR
>NZ_CP036276.1|WP_145375733.1|2526251_2527418_-|hypothetical-protein
MPRLLYGNFDFEHHLTGAGAPSPDSKLGRINAELTPALIALADEEDYLWCPAPFDESHLNDLTAAGMPRPRLVTAGASLPRDLSLVPWGWSDVALKLATQTGASAEHPPLEVVKQANCRRVAYELETRWNCGLDGAAEICHLDELARVIEQSANFSLGWVLKARFGMSGRERHLGSGVEVETPTINWAKKRLARDGAVLFEPWVQRIDEAGLQFEIPRDGEPQLLGITPQLCDATGHYRGSRLTISAAAATAWQTAVDVGRRLAVHMQQTGYFGPLGIDAMRYRDQQGEIRIRPLQDINARLTMGRLAWGFRRCLVPGEAGAWLHFPFQPLEGSEDSPWEHIRRKLPADCRIIPTSPATIGGQPPKLMHLIVAAPTESALADVEQLLV
>NZ_CP036276.1|WP_145375735.1|2527734_2530776_+|sulfatase-like-hydrolase/transferase
MLLTHAAERALLHKTTAALGVVVCLWLCALSSGCHHDVAVPELTCDMRGVSGDALVVPANAQWVDSGMDVQSGESVTLVAHGRIRHLIPQTEQEIEKSEAGPAGTFFYDDSQGHQEFPLPAAGSGPAPCYCLIGRIGEGRPFFVGDGMSIAAESTGRLYLGVNDFDVSDNTGEFYVEVSKPDTVQPVSFRQDVRRDAPEGLPAAGCSVVVFYVDGLRPDVLEEMSAMHHVPHLTEHFIDGGTHMRNTFTAFPSDTITSNGTMWTGCFSDRHGIKGQIRFSRQRLESESGLDPMGPSRTSRLLRPHGTDKLIHNAQAATVGYFEGNEAEIRWKSSKRTGIPAVYDYLRVEGNDWATGVLPIMTDAPPSMWTRSLARHLPYFQAHQAWQYIDDANAHFAVRHLLNREQPLTVIWLPETDSVSHKYCRGQFGTTRKTIAMADVLVGDVTEELRAQGRLQNTYLVLVSDHGHLGGRKTHLTRYDLVHELFFREREVTADGRWVGGGLGLSVRQHRLENWHTGDTKDKMVYVDGNSDGAARIFLPRGNYQSGDWNGPNRPADLLAYQIAPHLPAVDLPQYIVSSRAVNHAGEEQNPVDLALMKLDDRSILITTADRGQAIIDRRQRKKGGWEYRYTVVDNVRPGANGAAEFDVVENPKTDPLKLLQEVWPQYFTYYHDEEKWLQLTAPTEYPDGVVTLTRHMLWQDHLKVREQEYAPDLVVTARHGWFFGTQNTPGTTHGYPLADAVRATWYLSGPNIRRGARIHEPARLADLTPTILTMASVNTRPEWFEGTVRRTVFATAAAEPSADDTPVHWRDVDLQAWDKLDYAPVPEFDRQPITVNRPGSPWDVNNIAYNALTVGDWSVFRLVDDALAPGKDKKKPVTETVDSIERRGRRSRHKWVAEGTHALNVSEVSLSDYSLTSSGNMYRANGVVDWLQNRGTRLDEKISDKVGRNTVLGAPKVNRAVDGVQDGYWDVYKYVQRLMVEVLDETVLNGLENNVDRAINASRKTPPEILVQ
>NZ_CP036276.1|WP_145375736.1|2531281_2532103_-|hypothetical-protein
MAESPTIWETIRTWRRDLRQWATGPEGLSLVVSAGVHVLLFLGIALMLFLFGLRLEDHPGDRGPINALFTETSVDKKLPLESLADTEFELTDTLADASELSSLNSESITDNVRFVPDTVLSDFGDTAATLPALPQNALDMVNEGGGNGKSWKRGGFAMPTNKGKVITQGSFSVWTVPEDPEPFKSYKIVIQLNRLVPIRDLRADVTGTVTGTDGYRASIGRVQKGIHFPRQLVIPKARQIAIEIPPAKFELVRDIIEVHSKKLDEKQRIEIVF
>NZ_CP036276.1|WP_145375738.1|2532480_2533635_-|A/G-specific-adenine-glycosylase
MKSSDTDLLAEFDADWRQRFRGQLRRWYARYGRELPWRNSRDPYRVWISEIMLQQTTVTAVVPFFKRFLARFPDVSTLAAGEENDVLRMWEGLGYYSRARNIHKAARIIVADFGGEFPKDVAALESLPGIGRYTAGAIVSFAYDRPAAIVEANTLRLYSRLLGYEQDPRSSSGQRLLWQFAESILPRKQPGTFNQALMDLGATVCTPVDPQCLACPVKSGCRAFQSGSQDRIPVPQKRPELTDVTEAAVAIVHNEEYLLCRRPHGERWAGLWDFPRFATSEFSAPHNGRDLRKIRGELEGHLKTQLGLAAHVEDLLKQFRHSVTRYRIQLLCFTGRLANTTTQPNAEEYAWVCPSDFHEYPLSVTGRKFADILVNKRSELPFID
>NZ_CP036276.1|WP_145375739.1|2533923_2534802_-|creatininase-family-protein
MSSRAETEYRYEKLTWPEINDAVDLGKVCIIPVGAVEQHGPHLPLDVDLVCPGGVAHGAGQEMTDKILVLPTIPYGYTGHVMDFPGTINTHYETFIRQVLDVTKSLAYHGFKKIILLNGHGSNMPNLDLAARRTNLETDAECVLAAWWQLLTVDPEFIPSWRESKFPGGCAHAGELETSMYMYLDGDNVRTDLIKNGVISFNEEESPFNWVDVFSAGPATLVSWTSSYSDTGVLGEAELATAEKGERVYREAVKQLCAFVNYFGPRPKDQRGRHQRHAPTMPLPWGQRPIED
>NZ_CP036276.1|WP_145375741.1|2534950_2536366_-|hypothetical-protein
MKMKFKLNLHKIIRKPWAAAIAVLGVCLIHYLTATTVLETTVNVKPHDQPVDPKSMSEIPEAVFDHAFAALDAQRTKAGKPLLDLNAVAQQLSVSFNEENQTLQLRCLSQDAGEAESILNALADGYVENSRQLKSSVALPRIEQLKENNQEAQQQLQAGKTTIAAIKNQMDEESLSETAQMASMERIKSFSAQIVEAKADRLDAENRYHEASQELETGSAVNLVAAQLSTGSAKEIVQAVMSHADLVDELQQLRQTEREYSQYYGARHPRMIEIQSKQAELLRQIDDLSETGSGIQQISTIDQPDQNDRRALLLRTLAMDLRQKQTREDDLQDQWDLEQARIIRHSELQDRLQKAQLETQAAENKLESIKAKIATTTTGHKAHAVILAPASTATEPVSPSFWGHLLWGCLAAVAVGLLSRWAFKDLKQGTASSTTPLSSSTETAETSTQPPLYARRLMRLAKLNRNQEATS

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1400601 : 1455552

Brazilian_cedratvirus(28.57%)

transposase,terminase,tRNA,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_145374499.1\|1400601_1401462_+\|transposase	transposase	NA	NA	NA	NA
WP_145374673.1\|1402466_1403222_+	hypothetical protein	NA	NA	NA	NA
WP_145374674.1\|1403629_1404034_+	hypothetical protein	NA	NA	NA	NA
WP_145374675.1\|1404169_1404592_-	hypothetical protein	NA	NA	NA	NA
WP_145374676.1\|1404848_1406312_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_145374677.1\|1406418_1406643_-	hypothetical protein	NA	NA	NA	NA
WP_145374678.1\|1407036_1408617_+	SDR family oxidoreductase	A0A1S5V2E9	Saudi_moumouvirus	5.9e-37	31.1
WP_145374679.1\|1408891_1409344_+\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA
WP_145374680.1\|1409617_1410871_-	hypothetical protein	NA	NA	NA	NA
WP_145374681.1\|1411082_1411985_+	TIM barrel protein	NA	NA	NA	NA
WP_145374682.1\|1412042_1413665_-\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_145374683.1\|1414755_1415757_-	3'(2'),5'-bisphosphate nucleotidase	NA	NA	NA	NA
WP_145374684.1\|1415852_1416644_-	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA
WP_145374685.1\|1417198_1421056_-	protein kinase	A0A2R8FF19	Brazilian_cedratvirus	7.4e-17	28.5
WP_145374686.1\|1421185_1422076_-	hypothetical protein	NA	NA	NA	NA
WP_145374687.1\|1422072_1423716_-	S41 family peptidase	NA	NA	NA	NA
WP_145374688.1\|1424555_1425761_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_145374689.1\|1425688_1426954_+	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA
WP_145374690.1\|1427147_1428524_+	hypothetical protein	NA	NA	NA	NA
WP_145374691.1\|1428773_1430084_+	radical SAM protein	A0A0N7G7K6	Chrysochromulina_ericina_virus	5.8e-06	29.1
WP_145374692.1\|1430428_1430974_+	hypothetical protein	NA	NA	NA	NA
WP_145374693.1\|1430981_1432274_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_145374694.1\|1432309_1432546_+	DUF3311 domain-containing protein	NA	NA	NA	NA
WP_145374695.1\|1432542_1434105_+	sodium:solute symporter family protein	NA	NA	NA	NA
WP_145374696.1\|1434159_1434582_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_145374697.1\|1434854_1438154_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.3e-99	35.6
WP_145374698.1\|1438524_1439685_+\|protease	protease modulator HflC	NA	NA	NA	NA
WP_145374699.1\|1439627_1440641_+\|protease	protease modulator HflK	NA	NA	NA	NA
WP_145374700.1\|1440868_1441684_+	menaquinone biosynthesis protein	NA	NA	NA	NA
WP_145374701.1\|1441610_1442795_+	dehypoxanthine futalosine cyclase	NA	NA	NA	NA
WP_145374702.1\|1442929_1443700_+	ATP-binding cassette domain-containing protein	A0A2R8FG22	Brazilian_cedratvirus	2.8e-16	29.2
WP_145374703.1\|1443755_1446182_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_145374704.1\|1446429_1447458_+	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_145374705.1\|1447983_1449366_+	hypothetical protein	NA	NA	NA	NA
WP_145374706.1\|1449498_1451673_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	4.9e-143	42.4
WP_145374707.1\|1451852_1452140_-	hypothetical protein	NA	NA	NA	NA
WP_145374708.1\|1452407_1453136_+	ATP-binding cassette domain-containing protein	A0A2H4P6Z4	Pseudomonas_phage	1.5e-35	45.1
WP_145374709.1\|1453057_1453624_+	hypothetical protein	NA	NA	NA	NA
WP_145374710.1\|1453724_1454174_+	hypothetical protein	NA	NA	NA	NA
WP_145374711.1\|1454082_1455552_+\|terminase	terminase	NA	NA	NA	NA

DBSCAN-SWA_2

2173575 : 2257312

Staphylococcus_phage(22.22%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_145374576.1\|2173575_2174760_-\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	2.6e-13	28.8
WP_145375425.1\|2175016_2176312_-	twin-arginine translocation signal domain-containing protein	NA	NA	NA	NA
WP_145373641.1\|2177182_2178326_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_145375426.1\|2178423_2179866_-	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_145375427.1\|2180153_2181635_-	HTTM domain-containing protein	NA	NA	NA	NA
WP_145375428.1\|2181965_2183318_+	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_145375429.1\|2183414_2184707_-	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_145375430.1\|2184806_2186663_-	DUF1549 domain-containing protein	NA	NA	NA	NA
WP_145375431.1\|2187258_2187450_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_145375432.1\|2187780_2188125_-	hypothetical protein	NA	NA	NA	NA
WP_145375433.1\|2188429_2189350_+	TIM barrel protein	NA	NA	NA	NA
WP_145375434.1\|2189674_2191000_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_145375435.1\|2191118_2192366_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_145375436.1\|2192577_2193945_-	MFS transporter	NA	NA	NA	NA
WP_145375437.1\|2194078_2195353_-	MFS transporter	NA	NA	NA	NA
WP_145375438.1\|2195587_2197705_-	hypothetical protein	NA	NA	NA	NA
WP_145375439.1\|2197734_2199861_-	hypothetical protein	NA	NA	NA	NA
WP_145375440.1\|2199914_2202014_-	hypothetical protein	NA	NA	NA	NA
WP_145375441.1\|2202077_2203280_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_145375442.1\|2203576_2204731_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	1.7e-22	26.0
WP_145380580.1\|2204881_2206093_+	UDP-N-acetyl-D-mannosamine dehydrogenase	M1HWZ1	Paramecium_bursaria_Chlorella_virus	2.5e-27	26.9
WP_145375443.1\|2206213_2207050_+	hypothetical protein	NA	NA	NA	NA
WP_145375444.1\|2207076_2207889_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.0e-12	25.5
WP_145375445.1\|2207932_2209771_+	glycosyltransferase	NA	NA	NA	NA
WP_145375446.1\|2210497_2211901_+	hypothetical protein	NA	NA	NA	NA
WP_145375447.1\|2212071_2212680_-	NAAT family transporter	NA	NA	NA	NA
WP_145375448.1\|2212907_2213318_+	Dabb family protein	NA	NA	NA	NA
WP_145375449.1\|2213379_2214591_+	VCBS repeat-containing protein	NA	NA	NA	NA
WP_145375450.1\|2214601_2218162_-	c-type cytochrome	NA	NA	NA	NA
WP_145375451.1\|2219441_2220152_-	hypothetical protein	NA	NA	NA	NA
WP_145375452.1\|2220366_2221035_-	hypothetical protein	NA	NA	NA	NA
WP_145375453.1\|2221465_2224309_-	protein kinase	M1HZT4	Acanthocystis_turfacea_Chlorella_virus	4.5e-19	29.6
WP_145375454.1\|2224565_2225090_+	glutaredoxin family protein	NA	NA	NA	NA
WP_145375455.1\|2225128_2225806_+	DUF2064 domain-containing protein	NA	NA	NA	NA
WP_145375456.1\|2225888_2226353_+	response regulator	W8CYM9	Bacillus_phage	8.3e-16	38.2
WP_145375037.1\|2226589_2227837_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_145375457.1\|2228113_2229376_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_145375458.1\|2229896_2231222_+	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_145375459.1\|2231650_2232499_+	hypothetical protein	NA	NA	NA	NA
WP_145375460.1\|2232914_2233859_+	acyltransferase family protein	NA	NA	NA	NA
WP_145375461.1\|2234077_2235160_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_145375462.1\|2235214_2236450_+	ABC transporter permease	NA	NA	NA	NA
WP_145380581.1\|2236669_2238172_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-12	25.4
WP_145375463.1\|2238237_2238585_+	hypothetical protein	NA	NA	NA	NA
WP_145375464.1\|2238615_2239164_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_145375465.1\|2239240_2240662_-	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	1.5e-36	29.6
WP_145375466.1\|2240764_2241508_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_145375467.1\|2241904_2242342_+	hypothetical protein	NA	NA	NA	NA
WP_145375468.1\|2242565_2244134_-	hypothetical protein	NA	NA	NA	NA
WP_145375469.1\|2244180_2245443_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_145375470.1\|2245684_2246563_-	DUF58 domain-containing protein	NA	NA	NA	NA
WP_145375471.1\|2246579_2248202_-	ABC transporter permease	NA	NA	NA	NA
WP_145375472.1\|2248265_2249270_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-17	30.1
WP_145375473.1\|2249324_2251388_-	hypothetical protein	NA	NA	NA	NA
WP_145380582.1\|2251653_2252736_-	AAA domain-containing protein	NA	NA	NA	NA
WP_145375474.1\|2252806_2254213_-	hypothetical protein	NA	NA	NA	NA
WP_145375475.1\|2254410_2254851_-	hypothetical protein	NA	NA	NA	NA
WP_145375476.1\|2254933_2255782_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
WP_145375435.1\|2256064_2257312_+\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

3452052 : 3461612

Erysipelothrix_phage(16.67%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_145376693.1\|3452052_3453669_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	6.6e-145	50.9
WP_145376694.1\|3453668_3454133_-\|terminase	phage terminase small subunit P27 family	Q6DMU4	Streptococcus_phage	4.4e-33	50.0
WP_145376695.1\|3454260_3454797_-	HNH endonuclease	Q38456	Bacillus_phage	2.1e-10	35.5
WP_145376696.1\|3455189_3455591_+	hypothetical protein	NA	NA	NA	NA
WP_145376697.1\|3455819_3456437_-	hypothetical protein	NA	NA	NA	NA
WP_145376698.1\|3456429_3457563_-	RimK-like protein	S5VKI3	Leptospira_phage	2.4e-32	29.7
WP_145376699.1\|3458219_3458657_-	hypothetical protein	NA	NA	NA	NA
WP_145376700.1\|3458670_3459546_-	hypothetical protein	NA	NA	NA	NA
WP_145376701.1\|3459915_3460296_-	DUF1937 family protein	A0A2D1GN97	Pseudoalteromonas_phage	1.7e-06	29.7
WP_145376702.1\|3460292_3461612_-	chromosome partitioning protein ParB	A0A2H4JGF1	uncultured_Caudovirales_phage	5.2e-79	41.7

DBSCAN-SWA_4

3719939 : 3883213

101

uncultured_Caudovirales_phage(25.0%)

transposase,terminase,integrase,protease

attL 3714460:3714475|attR 3790359:3790374

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3714460:3714475	attL	NA	NA	NA	NA
WP_145376875.1\|3719939_3720650_-\|transposase	transposase	NA	NA	NA	NA
WP_145376876.1\|3720825_3721059_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_145376877.1\|3721073_3725849_+	DUF3320 domain-containing protein	NA	NA	NA	NA
WP_145376878.1\|3725913_3726852_+	DUF4339 domain-containing protein	NA	NA	NA	NA
WP_145376879.1\|3726904_3727765_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_145376880.1\|3727804_3729073_+	DNA repair exonuclease	NA	NA	NA	NA
WP_145376881.1\|3729069_3732606_+	AAA family ATPase	NA	NA	NA	NA
WP_145376882.1\|3732662_3733727_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_145376883.1\|3734022_3735525_-	recombinase family protein	K4ICM1	Acidithiobacillus_phage	6.7e-83	48.5
WP_145376884.1\|3735521_3736019_-	DUF2924 domain-containing protein	K4I3X1	Acidithiobacillus_phage	1.8e-08	31.4
WP_145376885.1\|3736270_3736570_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	9.1e-08	32.3
WP_145376886.1\|3736532_3736778_+\|transposase	transposase domain-containing protein	NA	NA	NA	NA
WP_145376887.1\|3736844_3737060_+\|transposase	transposase	NA	NA	NA	NA
WP_145376888.1\|3737206_3738316_-	hypothetical protein	NA	NA	NA	NA
WP_145376889.1\|3738686_3745094_-	RHS repeat-associated core domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	4.7e-08	28.7
WP_145376890.1\|3746568_3747057_-	hypothetical protein	NA	NA	NA	NA
WP_145376891.1\|3747503_3753929_-	RHS repeat-associated core domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	2.7e-08	27.0
WP_145376892.1\|3754407_3756555_-	hypothetical protein	NA	NA	NA	NA
WP_145376893.1\|3757233_3759564_+	hypothetical protein	NA	NA	NA	NA
WP_145376894.1\|3759646_3761377_+	type II secretion system protein GspE	NA	NA	NA	NA
WP_145376895.1\|3761516_3762458_-	hypothetical protein	NA	NA	NA	NA
WP_145376896.1\|3762641_3763187_-	hypothetical protein	NA	NA	NA	NA
WP_145376897.1\|3763183_3764545_-	hypothetical protein	NA	NA	NA	NA
WP_145376898.1\|3764558_3765068_-	hypothetical protein	NA	NA	NA	NA
WP_145376899.1\|3765079_3766006_-	hypothetical protein	NA	NA	NA	NA
WP_145376900.1\|3766085_3766694_-	hypothetical protein	NA	NA	NA	NA
WP_145376901.1\|3766690_3767101_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_145376902.1\|3767048_3767651_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_145380656.1\|3767604_3768090_-	type II secretion system major pseudopilin GspG	NA	NA	NA	NA
WP_145376903.1\|3768094_3769300_-	type II secretion system F family protein	NA	NA	NA	NA
WP_145376904.1\|3770009_3771668_-	hypothetical protein	NA	NA	NA	NA
WP_145376905.1\|3771657_3772272_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_145376906.1\|3772284_3773658_-	chromosome partitioning protein ParB	A0A2H4JGF1	uncultured_Caudovirales_phage	1.9e-76	39.3
WP_145376907.1\|3774100_3774640_-	hypothetical protein	NA	NA	NA	NA
WP_145376908.1\|3775793_3775985_-	hypothetical protein	NA	NA	NA	NA
WP_145376909.1\|3776250_3777660_-	porin	NA	NA	NA	NA
WP_145376910.1\|3777906_3779028_+	hypothetical protein	NA	NA	NA	NA
WP_145376911.1\|3779162_3779693_+	heme-binding protein	NA	NA	NA	NA
WP_145376912.1\|3780070_3781129_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_145376913.1\|3781425_3783096_-	recombinase family protein	A0A2K9V406	Faecalibacterium_phage	1.3e-26	26.4
WP_145376914.1\|3784091_3787169_+	restriction endonuclease	NA	NA	NA	NA
WP_145376915.1\|3787230_3788088_+	DNA damage-inducible protein D	A0A2H4J297	uncultured_Caudovirales_phage	2.5e-26	37.3
WP_145376916.1\|3790984_3792805_+	AAA family ATPase	NA	NA	NA	NA
3790359:3790374	attR	NA	NA	NA	NA
WP_145376917.1\|3792911_3793541_+	ATP-binding protein	NA	NA	NA	NA
WP_145376918.1\|3793605_3795678_+	AAA family ATPase	A0A1V0SDG5	Indivirus	7.0e-06	22.1
WP_145376919.1\|3796039_3797365_-	hypothetical protein	NA	NA	NA	NA
WP_145376920.1\|3797599_3803845_-	hypothetical protein	NA	NA	NA	NA
WP_145380657.1\|3804145_3804307_-\|terminase	terminase	NA	NA	NA	NA
WP_145376921.1\|3804534_3805506_-	hypothetical protein	NA	NA	NA	NA
WP_145376922.1\|3805750_3807367_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	4.3e-144	50.5
WP_145376923.1\|3807366_3807831_-\|terminase	phage terminase small subunit P27 family	Q6DMU4	Streptococcus_phage	5.7e-33	49.3
WP_145376924.1\|3807969_3808440_-	HNH endonuclease	Q38456	Bacillus_phage	4.0e-10	36.4
WP_145376925.1\|3808898_3809270_+	hypothetical protein	NA	NA	NA	NA
WP_145376926.1\|3809440_3811060_-	hypothetical protein	NA	NA	NA	NA
WP_145376927.1\|3811421_3812540_-	hypothetical protein	NA	NA	NA	NA
WP_145376928.1\|3812961_3813153_-	hypothetical protein	NA	NA	NA	NA
WP_145376929.1\|3813149_3813560_-	DUF1937 family protein	NA	NA	NA	NA
WP_145376930.1\|3813556_3814174_-	site-specific DNA-methyltransferase	A0A0A8ILE7	Aurantimonas_phage	4.2e-23	37.0
WP_145376931.1\|3813962_3814784_-	hypothetical protein	A0A2H4JGF1	uncultured_Caudovirales_phage	3.6e-46	48.1
WP_145376932.1\|3815017_3817747_-	hypothetical protein	NA	NA	NA	NA
WP_145376933.1\|3817817_3819089_-	hypothetical protein	NA	NA	NA	NA
WP_145376934.1\|3819085_3820495_-	hypothetical protein	NA	NA	NA	NA
WP_145376935.1\|3820566_3820791_-	hypothetical protein	NA	NA	NA	NA
WP_145376936.1\|3821067_3821886_-	hypothetical protein	NA	NA	NA	NA
WP_145375505.1\|3822216_3823203_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_145376937.1\|3823196_3823520_-\|transposase	transposase	NA	NA	NA	NA
WP_145376938.1\|3823910_3826085_+\|protease	trypsin-like serine protease	A0A1S5Y2X3	uncultured_archaeal_virus	5.6e-06	25.9
WP_145376939.1\|3826281_3826659_+	hypothetical protein	A0A1W6JP18	Morganella_phage	2.8e-14	50.7
WP_145376940.1\|3827205_3829821_-	hypothetical protein	NA	NA	NA	NA
WP_145376941.1\|3829963_3830314_+	hypothetical protein	NA	NA	NA	NA
WP_145376942.1\|3830310_3831414_+	hypothetical protein	NA	NA	NA	NA
WP_145376943.1\|3831486_3832680_+	AAA domain-containing protein	NA	NA	NA	NA
WP_145376944.1\|3832689_3835179_+	hypothetical protein	NA	NA	NA	NA
WP_145376945.1\|3835171_3836320_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	2.1e-52	34.4
WP_145376946.1\|3836785_3838552_-	mechanosensitive ion channel	NA	NA	NA	NA
WP_145376947.1\|3839099_3839477_-	two pore domain potassium channel family protein	NA	NA	NA	NA
WP_145376948.1\|3839466_3841083_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_145376949.1\|3841347_3841560_+	DUF1656 domain-containing protein	NA	NA	NA	NA
WP_145376950.1\|3841569_3842859_+	biotin/lipoyl-binding protein	NA	NA	NA	NA
WP_145376951.1\|3842862_3845052_+	hypothetical protein	NA	NA	NA	NA
WP_145376952.1\|3845091_3846303_+	sodium:proton antiporter	NA	NA	NA	NA
WP_145376953.1\|3846570_3847323_-	hypothetical protein	NA	NA	NA	NA
WP_145376954.1\|3848289_3849264_+	hypothetical protein	NA	NA	NA	NA
WP_145380658.1\|3849870_3850173_+\|transposase	transposase	NA	NA	NA	NA
WP_145376955.1\|3850311_3853062_-	HAD-IC family P-type ATPase	M1I547	Acanthocystis_turfacea_Chlorella_virus	6.1e-74	27.9
WP_145376956.1\|3853243_3854176_-	universal stress protein, UspA	NA	NA	NA	NA
WP_145376957.1\|3854247_3854979_-	universal stress protein	NA	NA	NA	NA
WP_145376958.1\|3856177_3861649_-	DUF1080 domain-containing protein	B5LWE2	Feldmannia_species_virus	4.0e-16	26.0
WP_145376959.1\|3862317_3864939_-	DUF4838 domain-containing protein	NA	NA	NA	NA
WP_145376960.1\|3865031_3865448_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
WP_145376961.1\|3865791_3866811_-	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_145376962.1\|3867212_3867947_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_145376963.1\|3868114_3868315_-	hypothetical protein	NA	NA	NA	NA
WP_145376964.1\|3868924_3870157_+	hypothetical protein	NA	NA	NA	NA
WP_145376965.1\|3870917_3871778_-	calcium-binding protein	NA	NA	NA	NA
WP_145376966.1\|3871967_3875747_+	protein kinase	A0A2K9L4T9	Tupanvirus	1.9e-09	24.1
WP_145376967.1\|3875874_3876468_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_145376968.1\|3876627_3879738_-	MMPL family transporter	NA	NA	NA	NA
WP_145376969.1\|3879734_3881168_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_145376970.1\|3881789_3882122_-	hypothetical protein	NA	NA	NA	NA
WP_145376971.1\|3882655_3883213_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_5

4614979 : 4660715

Caulobacter_phage(33.33%)

transposase,integrase

attL 4610439:4610453|attR 4658297:4658311

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4610439:4610453	attL	NA	NA	NA	NA
WP_145377610.1\|4614979_4615954_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_145375505.1\|4616459_4617446_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_145377611.1\|4617809_4618190_+\|transposase	transposase	NA	NA	NA	NA
WP_145377612.1\|4618255_4620301_-	hypothetical protein	NA	NA	NA	NA
WP_145377613.1\|4620836_4621745_+	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	3.8e-81	52.7
WP_145377614.1\|4621823_4622018_+	hypothetical protein	NA	NA	NA	NA
WP_145377615.1\|4622570_4622828_-	addiction module protein	NA	NA	NA	NA
WP_145377616.1\|4623020_4623353_-	hypothetical protein	NA	NA	NA	NA
WP_145377617.1\|4623644_4624649_+	AAA family ATPase	NA	NA	NA	NA
WP_145377618.1\|4626141_4627356_+	AAA family ATPase	NA	NA	NA	NA
WP_145377619.1\|4627355_4629197_+	AAA family ATPase	NA	NA	NA	NA
WP_145377620.1\|4629277_4629544_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_145377621.1\|4629732_4630014_-	hypothetical protein	NA	NA	NA	NA
WP_145377622.1\|4630433_4630934_-	hypothetical protein	NA	NA	NA	NA
WP_145377623.1\|4631152_4631566_-	hypothetical protein	NA	NA	NA	NA
WP_145377624.1\|4631555_4634189_-	relaxase domain-containing protein	NA	NA	NA	NA
WP_145377625.1\|4634549_4634762_+	hypothetical protein	NA	NA	NA	NA
WP_145377626.1\|4635380_4636016_+	AAA family ATPase	A2I303	Vibrio_virus	1.2e-44	45.9
WP_145377627.1\|4636012_4636252_+	hypothetical protein	NA	NA	NA	NA
WP_145377628.1\|4636327_4637233_+	replication initiator protein A	NA	NA	NA	NA
WP_145377629.1\|4637646_4638774_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_145377630.1\|4639459_4640188_+	hypothetical protein	NA	NA	NA	NA
WP_145377631.1\|4640467_4640977_+	hypothetical protein	NA	NA	NA	NA
WP_145377632.1\|4641076_4642261_+	hypothetical protein	NA	NA	NA	NA
WP_145377633.1\|4642290_4643184_+	hypothetical protein	NA	NA	NA	NA
WP_145377634.1\|4644218_4644410_-	hypothetical protein	NA	NA	NA	NA
WP_145377635.1\|4644586_4645633_-	hypothetical protein	NA	NA	NA	NA
WP_145377636.1\|4645717_4648312_-	DUF1080 domain-containing protein	NA	NA	NA	NA
WP_145377637.1\|4648854_4650201_-\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_145377638.1\|4650477_4650909_+	hypothetical protein	NA	NA	NA	NA
WP_145380692.1\|4652000_4652456_+	DUF2892 domain-containing protein	NA	NA	NA	NA
WP_145377639.1\|4652501_4652786_-	hypothetical protein	NA	NA	NA	NA
WP_145377640.1\|4652900_4653098_-	cold shock domain-containing protein	Q9AZD3	Lactococcus_phage	7.3e-06	40.9
WP_145377641.1\|4653319_4653700_-	DoxX family membrane protein	NA	NA	NA	NA
WP_145377642.1\|4653711_4653909_-	hypothetical protein	NA	NA	NA	NA
WP_145377643.1\|4654034_4655042_-	methyltransferase	NA	NA	NA	NA
WP_145377644.1\|4655478_4656138_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_145377645.1\|4656465_4657839_-	hypothetical protein	NA	NA	NA	NA
WP_145377646.1\|4658009_4659239_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
4658297:4658311	attR	NA	NA	NA	NA
WP_145377647.1\|4659609_4660038_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_145377648.1\|4660139_4660715_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_6

5481697 : 5564992

Staphylococcus_phage(12.5%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_145378423.1\|5481697_5482288_-\|transposase	transposase	NA	NA	NA	NA
WP_145374349.1\|5482503_5483763_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_145378424.1\|5483964_5484168_-	hypothetical protein	NA	NA	NA	NA
WP_145378425.1\|5484230_5485385_-	hypothetical protein	NA	NA	NA	NA
WP_145378426.1\|5485588_5485807_+	hypothetical protein	NA	NA	NA	NA
WP_145378427.1\|5486491_5487631_+	hypothetical protein	NA	NA	NA	NA
WP_145378428.1\|5488114_5488603_+	hypothetical protein	NA	NA	NA	NA
WP_145380735.1\|5489541_5490750_+	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA
WP_145378429.1\|5490749_5491370_+	hypothetical protein	NA	NA	NA	NA
WP_145378430.1\|5491414_5491723_+	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA
WP_145378431.1\|5491806_5494221_+	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA
WP_145378432.1\|5494294_5495884_+	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA
WP_145378433.1\|5495940_5497596_+	NADH-quinone oxidoreductase subunit N	NA	NA	NA	NA
WP_145378434.1\|5497653_5498094_+	hypothetical protein	NA	NA	NA	NA
WP_145380736.1\|5498099_5498879_+	YchF/TatD family DNA exonuclease	NA	NA	NA	NA
WP_145375389.1\|5499344_5500358_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_145378435.1\|5500517_5503379_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	9.7e-248	48.9
WP_145378436.1\|5503901_5504321_+	hypothetical protein	NA	NA	NA	NA
WP_145378437.1\|5504435_5505119_-	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_145378438.1\|5505339_5506518_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_145378439.1\|5506487_5507438_+	hexose kinase	NA	NA	NA	NA
WP_145378440.1\|5507534_5508776_+	DUF2088 domain-containing protein	NA	NA	NA	NA
WP_145378441.1\|5508847_5509639_+	histidinol-phosphatase	NA	NA	NA	NA
WP_145378442.1\|5509749_5511447_+	sodium/solute symporter	A0A219Y9P9	Aeromonas_phage	1.6e-19	24.9
WP_145378443.1\|5511732_5515431_-	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA
WP_145378444.1\|5515619_5515802_-	hypothetical protein	NA	NA	NA	NA
WP_145378445.1\|5516011_5519047_+	protein kinase	S4VV57	Pandoravirus	3.5e-14	30.4
WP_145378446.1\|5519174_5520110_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_145378447.1\|5520265_5521309_-\|tRNA	tRNA-dihydrouridine synthase family protein	NA	NA	NA	NA
WP_145378448.1\|5522004_5524191_+	redoxin domain-containing protein	NA	NA	NA	NA
WP_145378449.1\|5524532_5525417_+	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_145378450.1\|5525456_5527040_+	hypothetical protein	NA	NA	NA	NA
WP_145378451.1\|5527120_5528422_+	WD40 repeat domain-containing protein	NA	NA	NA	NA
WP_145378452.1\|5528503_5529772_+	WD40 repeat domain-containing protein	NA	NA	NA	NA
WP_145380737.1\|5529882_5531415_+	sulfatase-like hydrolase/transferase	A0A2K9L727	Tupanvirus	4.2e-16	25.6
WP_145378453.1\|5531808_5534940_+	DUF1553 domain-containing protein	NA	NA	NA	NA
WP_145378454.1\|5534944_5536426_+	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_145378455.1\|5536466_5537036_+	DUF1572 domain-containing protein	NA	NA	NA	NA
WP_145378456.1\|5537041_5537869_-	hypothetical protein	NA	NA	NA	NA
WP_145378457.1\|5537945_5539634_-	hypothetical protein	H8ZJ31	Ostreococcus_tauri_virus	8.8e-07	26.3
WP_145378458.1\|5539890_5540685_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
WP_145378459.1\|5541020_5544245_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_145378460.1\|5544574_5545084_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_145378461.1\|5545150_5546011_-	TPM domain-containing protein	NA	NA	NA	NA
WP_145378462.1\|5546203_5547199_-	serine hydrolase	NA	NA	NA	NA
WP_145378463.1\|5547376_5547865_-	hypothetical protein	NA	NA	NA	NA
WP_145378464.1\|5547935_5548628_-	hypothetical protein	NA	NA	NA	NA
WP_145378465.1\|5548634_5550032_-	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_145378466.1\|5550285_5550843_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_145378467.1\|5550830_5552186_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	4.4e-41	28.2
WP_145378468.1\|5552257_5553253_+	DUF21 domain-containing protein	NA	NA	NA	NA
WP_145378469.1\|5553320_5554679_+	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_145378470.1\|5554869_5555964_+	sugar nucleotide-binding protein	NA	NA	NA	NA
WP_145378471.1\|5556137_5557301_+	terpene cyclase/mutase family protein	NA	NA	NA	NA
WP_145378472.1\|5557291_5557891_-	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
WP_145378473.1\|5558261_5560544_+	primosomal protein N'	NA	NA	NA	NA
WP_145378474.1\|5560896_5561277_+	DUF559 domain-containing protein	NA	NA	NA	NA
WP_145378475.1\|5561445_5562564_-	mandelate racemase/muconate lactonizing enzyme family protein	Q6A202	Oenococcus_phage	1.5e-26	25.6
WP_145378476.1\|5562973_5564992_+\|protease	ATP-dependent zinc metalloprotease FtsH	A0A0P0CCN8	Ostreococcus_mediterraneus_virus	1.7e-97	45.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP036276

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection