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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP022560 Pseudomonas putida strain B1 chromosome, complete genome 1 crisprs WYL,csa3,cas3,RT,DEDDh,DinG 0 0 10 0

Results visualization

1. NZ_CP022560
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP022560_1 3935128-3935201 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 548505 : 556285 10 Planktothrix_phage(16.67%) NA NA
DBSCAN-SWA_2 1237894 : 1283742 39 Tupanvirus(25.0%) protease,holin,transposase NA
DBSCAN-SWA_3 1699654 : 1707572 9 uncultured_Caudovirales_phage(85.71%) NA NA
DBSCAN-SWA_4 2253802 : 2263877 7 Escherichia_phage(16.67%) NA NA
DBSCAN-SWA_5 2448940 : 2464819 30 Pseudomonas_phage(56.25%) integrase attL 2444823:2444836|attR 2451938:2451951
DBSCAN-SWA_6 3163205 : 3194244 30 Salmonella_phage(25.0%) integrase,transposase attL 3174729:3174763|attR 3188547:3188581
DBSCAN-SWA_7 3275462 : 3307819 39 uncultured_Caudovirales_phage(25.93%) integrase,portal,tail,holin,terminase,head,capsid attL 3277118:3277146|attR 3314634:3314662
DBSCAN-SWA_8 4004331 : 4013131 10 uncultured_Caudovirales_phage(75.0%) tRNA NA
DBSCAN-SWA_9 5860344 : 5922141 56 Feldmannia_species_virus(10.0%) protease,coat NA
DBSCAN-SWA_10 6101954 : 6173625 90 Pseudomonas_phage(40.68%) integrase,portal,tRNA,tail,head,protease,capsid attL 6097603:6097617|attR 6174645:6174659
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage