Overview of predicted results
Overview of the results
| Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
|---|---|---|---|---|---|---|---|
| NZ_CP024947 | Helicobacter pylori strain J182 chromosome, complete genome | 2 crisprs | cas3,cas2 | 0 | 2 | 1 | 0 |
1. NZ_CP024947
Click the left colored region to show detailed information
0
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NZ_CP024947_1 | 555466-555605 | Orphan |
NA
Consensus repeat of NZ_CP024947_1
|
1 spacers
spacers of NZ_CP024947_1
>1.1|555516|40|NZ_CP024947|CRISPRCasFinder ACAACGCCAAGAAACCCCAGAGGGTAAGCATGATGGAGAG |
CRISPR arrays and Neighbor proteins around NZ_CP024947_1
The CRISPR arrays of NZ_CP024947_1 >merge|NZ_CP024947|1|555466-555605|CRISPRCasFinder AGGCTCTCTAGCGTTACTGAAGAAATCATTTCAAAAAAACAAGAAGAATTACAACGCCAAGAAACCCCAGAGGGTAAGCATGATGGAGAGAGGCTCTCTAGCGTTACTGAAGAAATCATTTCAAAAAAACTAGAAGAATT >NZ_CP024947|1|1|555466-555605|CRISPRCasFinder AGGCTCTCTAGCGTTACTGAAGAAATCATTTCAAAAAAACAAGAAGAATT ACAACGCCAAGAAACCCCAGAGGGTAAGCATGATGGAGAG AGGCTCTCTAGCGTTACTGAAGAAATCATTTCAAAAAAACTAGAAGAATT
>NZ_CP024947.1|WP_145732073.1|554777_555083_+|hypothetical-protein MKIMHQVRDFLDSCKKTIQKNSSEVFKKTKRALFKEESQKIREQAVKIVEKRLKKEGMKLSDFNEEELKIMFEAEEKRLLEQIQTKHFKEVWEKGDNEQGK >NZ_CP024947.1|WP_145732071.1|553991_554663_+|sel1-repeat-family-protein MARSNPEELFDLGVESNKAKNFTQAKKYFEKSCELNYGGGCFGLGILYTNKDFGEKNYKKALALLTKGCELNYALGCGFLGNLYTNNGPMVKKDLRKATQYYSKACELNLGVSCSLLGFLYQNGNGVKKDLKKAFALYAKACGLKDGDGCLRLGEMQRFGEGVVKNREQAMKNFKKGCELKNKLACMGYKATIAEIMNERCQLGDEVTCVYLNNLLDLFDIDE >NZ_CP024947.1|WP_108281073.1|553455_553860_+|Holliday-junction-resolvase-RuvX MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEYFIKLLDFKGEIVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNH >NZ_CP024947.1|WP_145732070.1|552646_553459_+|DNA-protecting-protein-DprA MNQRMKSNFQYSALENIPKAFDILKNPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGVDIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSGSMSSARLAQKYQKPLFVLPQHLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAYLKFGDKLLEYELLGKVKRINHIVVLA >NZ_CP024947.1|WP_000118278.1|552413_552647_+|cell-division-topological-specificity-factor-MinE MSWFDFFKNKGSATTATDRLKLILAKERTLNLPYMEEMRKEIIAVIQKYTKSSDIHFKTLDSNQSVETIEVEIILPK >NZ_CP024947.1|WP_023526244.1|551610_552417_+|septum-site-determining-protein-MinD MAIVVTITSGKGGVGKSTTTANLAIGLAESGKKVVAVDFDIGLRNLDMILGLENRIVYDVVDVMEKNCNLSQALITDKKTKNLSFLAASQSKDKNILDKEKVAILINALRADFDYILIDSPAGIESGFEHAILHADMALVVVTPEVSSLRDSDRVVGIIDAKSNRAKKGMEVHKHLIINRLKPELVANGEMIPIEEVLKILCLPLIGIIPEDHHIISATNKGEPVIRTDCESAKAYQRITRRILGEEVEYVEFKAKRGFFSALKGIFS >NZ_CP024947.1|WP_145732068.1|550599_551592_+|ketol-acid-reductoisomerase MALPVYYDKDIDLGVIQSLQVGIIGYGTQGEAQALNLRDSKVRVRIGLYQGSLSVSKAKAEGFEVLEVKELVQQSDVIMVLLPDELHKEVLEKEVIPFLKEGQIVGFAHGFSVHFNQVILPKGVGAILVAPKGPGSALREEYLKNRGLYHLIAIEQESSKYNAKAVALSYAKAMGGGRMGVLETSFKEECESDLFGEQAVLCGGLEAIVRMGFETLIKAGYPEELAYFECVHEVKLVADLLHHKGVEGLRKHISNTAEFGAIKAREPMGNLLKKRMQKILKKIQNGSFAKDFLLEKSLNYPRLNTERKALKETKIEQIGEILRAPFNHKK >NZ_CP024947.1|WP_145732066.1|549568_550351_-|NAD+-synthase MQKDYQKLIVYLCDFLEKEAQKRGFKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSASMPENKTDALNLCETFSIPYTEYSIAPYDAIFSSHFKDASLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELACRLNIPKKILNKPPSADLFVGQSDEQDLGYPYSVIDPLLKDIEALFKNKPIDAEALTQLGYDEILVKNITSRIQKNAFKLELPTIAQKFNPE >NZ_CP024947.1|WP_145732064.1|548633_549572_-|tetraacyldisaccharide-4'-kinase MKSDKPFLERYFYDPTLLQKGLIFALYPFSLIYQGIATLKRKMAKKHDFKIPLISIGNLIAGGSGKTPFILEIAPRYQEVAVVSRGYQRDSKGLVVVSVKGNILVSQQTAGDEAYLLALNLKQASVIVSEKRELGVLKALELGAKIVFLDDGFRFNFNQFNLLLKPKIPPYYPFCLPSGLYRESIKSYKEAHLVITEDKDYQRITSISRPTKRMLLVTAIANPSRLDAFLPKEVVKKLYFRDHASFDLEILEKEFYQNSATSLLVTSKDLVKLQDCNLPLSVLDLKLEICPKVLERIDRYILSYPCNTKERL >NZ_CP024947.1|WP_145732062.1|548158_548701_+|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-N-acetyltransferase MKKNYSYGNTQAIDFTHLNDEEKLLVLEFRNHPNTALWMYSAFISLKTHLQFIEDLKNSPNHRYFLFKEEGVYLGVGSITKINFFHKHGYLGIYKNPFLKNGGETILKALECIAFEEFQLNSLHLEVMENNFKAIAFYEKNHYELEGRLKGFISKEKEFIDVLLYYKDKKGYNDQSSLKL >NZ_CP024947.1|WP_145732077.1|555788_556670_-|RluA-family-pseudouridine-synthase MPFVEEEFEILKPTKALFFVRDVLKCSLKEAQRHLDKQRLKQNQQAVRKSQMIQGVVSLIHFKPNEKTQALVFETKDFGVFDKPHQVYTHPKGYFYHESLLDCIQSHLGKNAHPAHRLDYETSGLVLAGKTLQSVKDLKALFMQKKVKKTYLALVHGLVEKSMKIDKPILTPQNIQKDLRIRSKISPLGKPSTTLVEPLSYNPFLDISLLKITPLTGRTHQIRLHLSSMGHRIVGEGLYGVADEEAREYLQLKRENHAPLLMLHAASLEFEFKGAHYKIASPMPERFMPFLKD >NZ_CP024947.1|WP_145732079.1|556669_558220_-|single-stranded-DNA-specific-exonuclease-RecJ MKQKLKAQIKERVVSIAYNEKGFPSPFLFKDLKKAALKIIEAMQINTEILVVGDYDADGVISSAIMAKFFESLNYKHVRIAIPNRFIDGYGISKKFLEKHHAPLIITVDNGINAFEAARFCKEKNYTLIITDHHCLHHDEVPDAYAVINPKQPDCDFIQKEVCGALVAFYLCYGIHQLLGKEKSHSSELLCLAGVATIADMMPLTFFNRFLVSKALYFLQKESLGAMGFLRQREVFRKRSLKASDISFNIAPLINSAGRMQDAKMALDFLSANNFQDGYSLYERLKACNLKRKMIQQQVFEEAFKHAMVGEKIIVAFKDNWHEGVLGIVASKLVEATQKPSLVFTFKEGVYKGSARSSSNIDLIDALNGVSSLLLGYGGHRQACGLSVGKNNIISLFETLENFDFKVLPFCETEPPLTLKLKDIDRELLEIIEMGEPYGQENPEPLFQAQNLEVIEEKIIKESHQVLRFKDKECVKEAIYFNTERFLKAGEKVSVLFSVELDEYSNEPKMFVKSLL >NZ_CP024947.1|WP_108314447.1|558228_559845_-|CTP-synthase-(glutamine-hydrolyzing) MDRAKFIFVTGGVLSSLGKGISSSSIATLLQHCNYQVSILKIDPYINIDPGTMSPLEHGEVFVTSDGAETDLDIGHYERFLNRNLTRLNNFTTGQIFSSVIENERKGEYLGKTIQIVPHVTDEIKRRIKSAAKGLDFLIVEVGGTVGDMEGMFYLEAIRQLKLELGNEKVINVHVTLIPYIQTTNELKTKPTQHSVQELRRLGVTPQIILARSPKPLDKELKNKIALSCDVEQDSVIVATDTKSIYACPILFLQEGILTPIARRFNLNKLHPKMAAWNTLVEKIIAPKHKVKIGFVGKYLSLKESYKSLIEALIHAGAHLDVQVNIEWLDSENFNEKTDLEGVDAILVPGGFGERGIEGKICAIQRARLEKLPFLGICLGMQLAIVEFCRNVLGLKGANSTEFNQRCEYPVVYLIEDFIDQNHQKQVRTYNSPLGGTMRLGEYECEIMPNSLLEKAYKKPSIKERHRHRYEINPKYRQEWENKGLKVVGFGANHLIEAIELEDHPFFVGVQFHPEFTSRLQSPNPIILDFIKSALHKS >NZ_CP024947.1|WP_145732082.1|560104_560773_+|PAP2-family-protein MAENSFKNVSTQPKPFFLLQVKTLFLLGGVFSTFFILIVGLVFFDYAHLMDNAIFNFVRSTPFNSSPILTLILQNIANLGSSQFVLPLSLLVGVFLSLYRRNLALGVWFVLSVILFEALLESLKHLFAYPVQWLSRNANFPNATALSLTLFYGLLILLIPHLITHQTLKNVLFYSLFGLIFLIGLVLIVLGVSFSSVLGGFCLGALGACFSIGIYLSVFQKI >NZ_CP024947.1|WP_000201853.1|562535_563567_+|flagellar-motor-switch-protein-FliG MATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTDKQIGAAVLEEFFAIFQSNQYINTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSYFPDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGAIKEMMFTFEDIVKLDNFAIREILKVADKKDLSLALKTSTKDLTDKFLNNMSSRAAEQFVEEMQYLGAVKIKDVDVAQRKIIEIVQSLQEKGVIQTGEEEDVIE >NZ_CP024947.1|WP_145732084.1|563553_564330_+|flagellar-assembly-protein-FliH MSLNSRKNLIQKDHLNKHDIQKYEFKSMANLPPKTNPNGASLETPNLEEPLEKKAIENDLIDCLLKKTDELSSHLVKLQMQFEKAQEESKALIENAKSDGYKIGFKEGEEKMRNELTHSVNEEKNQLLHAISALDEKMKKSEDHLMALEKELSSIAIDIAKEVILKEVEDNSQKVALALAEELLKNVLDATDIHLKVNPLDYPYLNERLQNASKIKLESNEAISKGGVMITSSNGSLDGNLMERFKTLKESVLENFKV >NZ_CP024947.1|WP_145732086.1|564326_566183_+|1-deoxy-D-xylulose-5-phosphate-synthase MILQNKTFDLNPNDIAGLELVCQTLRSRILEVVSANGGHLSSSLGAVELIVGMHALFDCQKNPFIFDTSHQAYAHKLLTGRFESFSTLRQFKGLSGFTKPSESAYDYFIAGHSSTSVSIGVGVAKAFCLKQALGMPIALLGDGSISAGIFYEALNELGDRKYPMIMILNDNEMSISTPIGALSKALSQLMKGPFYQSFRSKVKKILSTLPESVNYLASRFEESFKLITPGVFFEELGINYIGPINGHDLSAIIETLKLAKELKEPVLIHAQTLKGKGYKIAEGRYEKWHGVGPFDLDTGLSKKSKSAILSPTEAYSNTLLELAKKDEKIVGVTAAMPSGTGLDKLIDAYPLRFFDVAIAEQHALTSSSAMAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQGLLDVSYLRSIPNMVIFAPRDNETLKNAVRFANEHNSSPCAFRYPRGSFALKEGVFEPSGFVLGQSELLKKEGEILLIGYGNGVGRAHLVQLALKEKNIECALLDLRFLKPLDPNLSAIIAPYQKLYVFSDNYKLGGVASAILEFLSEQNILKPVKSFEIMDEFIMHGNTALVEKSLGLDTESLTDAILKDLGQER >NZ_CP024947.1|WP_145732088.1|566179_567988_+|elongation-factor-4 MKTKAPMKNIRNFSIIAHIDHGKSTLADCLIAECNAISNREMKSQVMDTMDIEKERGITIKAQSVRLNYTFKGEDYVLNLIDTPGHVDFSYEVSRSLCSCEGALLVVDATQGVEAQTIANVYIALDNHLEILPVINKIDLPNANVLEVKQDIEDTIGIDCSGANEVSAKARLGIKDLLEKIITTIPAPSGDSNAPLKALIYDSWFDNYLGALALVRIMDGSINTEQEILVMGTGKRHGVLGLYYPNPLKKIPTKSLECGEIGIVSLGLKSVTDIAVGDTLTDAKNPTFKPIEGFMPAKPFVFAGLYPIETDRFEDLREALLKLQLNDCALNFEPESSVALGFGFRVGFLGLLHMEVIKERLEREFSLNLIATAPTVVYEVHLTDNSIKYVQNPSELPPENCIACIKEPFVRATIITPSEFLGNLMQLLNNKRGIQEKMEYLNQSRVMLTYSLPSNEIVMDFYDKLKSCTKGYASFDYEPIENREAHLVKLDVRVAGDVVDALSIIIDKNKAYEKGRALVETMKELIPRQLFEVAIQASVGNKIIARETIKSVGKNVTAKCYGGDITRKRKLLEKQKEGKKRMKAIGKVELPQEAFLAILKID >NZ_CP024947.1|WP_145732090.1|568002_568761_+|DUF3883-domain-containing-protein MAKHKNYEILNLIGYALAKFDNDFIKEFGFSTKNAFFEYCVQIGLANTTGVIKNRMDLFDYFFPNKRKGWWQKGDAYIHRKLWIDSLFKDEDAKGFSHIVKWFLQEQYGIKDLGITPNAYLKTRYKSMQETGLEAELYFLNHYKNIEVFSCGSLKDMRLFGDGYDFYIQTNKQAFLVEVKGIREKQGALRLTQKEYDQAQAYSHDYVLVVVLNLSEKPYLLSIANPLKHLEFKACERKQKSILEYHLIGQIK >NZ_CP024947.1|WP_025447069.1|568763_569000_+|hypothetical-protein MNFTGGYRSGVQIDRNAPKRTYKYTKKDCDLILGIDTRTSECYIIPIEDIQEWGNAKSLSQLQHYKENWQILIDLALE |
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| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NZ_CP024947_2 | 1157403-1157550 | Orphan |
I-B
Consensus repeat of NZ_CP024947_2
|
2 spacers
spacers of NZ_CP024947_2
>2.1|1157437|26|NZ_CP024947|PILER-CR GCTAACTTAAGCTTCAACAATAGCGC >2.2|1157497|26|NZ_CP024947|PILER-CR GGCAACGCCAGCTTTGATAACGACAC >2.3|1157431|33|NZ_CP024947|CRISPRCasFinder AACAGCGCTAACTTAAGCTTCAACAATAGCGCT >2.4|1157491|27|NZ_CP024947|CRISPRCasFinder GGCAACGCCAGCTTTGATAACGACACC |
CRISPR arrays and Neighbor proteins around NZ_CP024947_2
The CRISPR arrays of NZ_CP024947_2 >merge|NZ_CP024947|2|1157403-1157550|PILER-CR,CRISPRCasFinder CTTCAATCAAGGGACTTATAACTTTAGTAACAGCGCTAACTTAAGCTTCAACAATAGCGCTTTCAATCAAGGGACTTATAATTTTAATGGCAACGCCAGCTTTGATAACGACACCTTCAATCAAGGGACTTATAACTTTAATACCAGC >NZ_CP024947|2|1|1157403-1157550|PILER-CR CTTCAATCAAGGGACTTATAACTTTAGTAACAGC GCTAACTTAAGCTTCAACAATAGCGC TTTCAATCAAGGGACTTATAATTTTAATGGCAAC GCCAGCTTTGATAACGACACCTTCAA TCAAGGGACTTATAACTTTAATACCAGC >NZ_CP024947|2|2|1157404-1157544|CRISPRCasFinder TTCAATCAAGGGACTTATAACTTTAGT AACAGCGCTAACTTAAGCTTCAACAATAGCGCT TTCAATCAAGGGACTTATAATTTTAAT GGCAACGCCAGCTTTGATAACGACACC TTCAATCAAGGGACTTATAACTTTAAT
>NZ_CP024947.1|WP_145732916.1|1155548_1156547_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase MKIFINGFGRIGRCVLRAVLERSDTNPKLEVIGINDPANWEILAYLLEHDSVHGLLPKEARYSNHKLIIGSLEIPVFNSIKDLKGVDVILECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHSLYQNQAIVSNASCTTNAIAPICAILDKAFGIKEGMLTTIHSYTSDQKLIDLAHPLDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKAPKDPINDLLIEASKGVLKGVLEIDLKERVSSDFISNPSSVIIAPDLTFTLENMVKIMGWYDNEWGYSHRLVDMAQFVYHY >NZ_CP024947.1|WP_145732914.1|1154712_1155405_-|Bax-inhibitor-1/YccA-family-protein MALYDRANSRNAYAENSLLHESELVSFVKTTYKFFAGSLLLATIGALLGLMNFQAVVQYKWVFFIAEIAALFGLMFSKSKPGLNLFMLFAFTSLSGVTLVPLLGMVIAKAGLGAVWQALGMTTIVFGLMSVYALKTKNDLANMGKMLFIALIVVLVCSLINLFLGSPMFQVVIAGASAILFSLYIAYDTQNIVKGMYDSPIDAAVSLYLDFLNVFISILQIIGIFSDRDK >NZ_CP024947.1|WP_145732912.1|1151356_1154614_-|carbamoyl-phosphate-synthase-large-subunit MPKRTDISNILLIGSGPIVIGQACEFDYSGTQSCKTLKSLGYRVILINSNPATVMTDPEFSHQTYIQPITPENIAAIIKKEKIDAILPTMGGQTALNAVMQMHQKGMLEGVELLGAKIEAIKKGEDRQAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAGGGSGVAYNIEEFQELAKNALDASPINEILIEESLLGWKEYEMEVIRDNKDNCIIVCCIENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDASFAILREIGVDTGGSNVQFAIHPETLRMVVIEMNPRVSRSSALASKATGFPIAKVATMLAVGFSLDEIQNDITNTPASFEPSLDYIVVKIPRFAFEKFAGVSSTLGTSMKSIGEVMAIGGNFLEALQKALCSLENNWLGFESLSKDLEMIKKEIRRPNPKRLLYIADAFRLGVCVDEVFELCQIDRWFLSQIQKLVKAEESINSSVLTDAKKLRGLKNLGFSDARIAAKIKENENLEMSPFEVELARSNLQIAPHFEEVDTCAAEFLSLTPYLYSTYAPNPLPPIENKQEKQEKKILIIGSGPNRIGQGIEFDYCCVHASFALKDLNIKSVMLNCNPETVSTDYDTSDTLYFEPIHFECVKTIIQRERVDGIIVHFGGQTPLKLAKDLAKMQAPIIGTPFKVIDIAEDREKFSLFLKELDIKQPKNGMAKSVDEAYSIANVIGFPIIVRPSYVLGGQHMQILENIEELHHYLESVTHALEISPKNPLLIDKFLEKAVELDVDAICDKKEVYIAGILQHIEEAGIHSGDSACFIPSTLRAEILDEIERVSTKIALHLGVVGLLNIQFAVHQNSLYLIEVNPRASRTVPFLSKALGVPLAKVATRVMVLEDLKEALKFYDKKNIVGYSKGVYKPKMPHFVALKEAVFPFNKLYGSDLILGPEMKSTGEVMGIARSLGLAFFKAQTACFNPIKNKGLIFVSIKDKDKEEACVLMKRLVQLGFELCATEGTHKALEKAGVKSLKVLKISEGRPNIMDLMMNGEISMAINTSDHKSQDDAKLIRSSVLKNHVSYFTTLSAIEVLILALEESSQKDELLALQDYLK >NZ_CP024947.1|WP_145732910.1|1150920_1151352_-|Sua5-YciO-YrdC-YwlC-family-protein MALVYLAQSDTTIGLLSKDSEKLNALKNRPKNQSVLIESADFSTLKSLVRAPNAFKNLIRRSAKTTFIYPNSKAVRVVRGRHGDFLKRFKTLYSTSANLTQCAYDKEIASNLADAVVSDERGLFESSSSKIFRLYKNKKVRIR >NZ_CP024947.1|WP_145732909.1|1148302_1150744_-|TonB-dependent-receptor MNDKRFRKYWSFSIFLSLLGMFELEAKEEEKEERKTERKKDKEKNAQHTLGKVTTQAAKIFNYNNQTTISSKELERRQANQISDMFRRNPNINVGGGAVMAQKIYVRGIEDRLARVTVDGAAQMGASYGHQGNTIIDPGMLKSVVVTKGAAQASAGPMALIGAIKMETKSASDFIPKGKDYAMSGAATFLTNFGDRETVMGAYRNNHFDALLYYTHQNIFYYRDGDNAMKNLFRPKAENKVTGSPSEQNNVMAKINGYLSERDILTLSYNMTRDNANRPLRANFTGTFLPYSCGDFNAFPNEKNPSDCLFENDASLFKTYSVNLVHNVSLNYEREGGSRFGDPKLKINGYTSIRNVQIDPLFKPNDIAASIPFTPNPKLGEENECVAQGGIYDALKQTCSITFKSLGGGSVVANKNLFIINSGFNANVIHTIDHKNDNLLEYGLNYQNLTTFDKAIPNSELVKPGDAPDACLRVTSPNDPNMNGRCQRNGATANVVGVYAQANYTLHPMVTLGAGTRYDVYTLVDKDWQLHITQGFSPSAALNVSPLENLNFRLSYAYVTRGPMPGGLVWMRQDNLRYNRNLKPEIGQNVEFNTEYSSQYFDFRAAGFVQLISNYINQFSSTLFVTNLPVQDIIYVPGYEVSGTAKYKGFSLGLSVARSWPSLKGRLIADVYELAATTGNVFILTASYKIPRTGLSITWLSRFVTDLSYCSYSPYRNGPTDIDRRPSHCPKTPGIFHVHKPGYGVSSFFITYKPTYKKLEGLSLNAVFNNVFNQQYIDQASPVMSPDEPNQDKYARGMAEPGFNARFEISYKF >NZ_CP024947.1|WP_145732907.1|1146511_1148056_-|outer-membrane-beta-barrel-protein-HofG MRQEKYFLTSSLSLLSFLLCPAEAFDYRFSGRVENFSKIGFNNSQINTKKGIYPTESFIDIVTLAQVKVNLLPKGTENHRLSVSLGGAIAAIPYDKTKYDINQANGKIFGSIVENFIGGYHGYFFNKYLGPAYAGTSQSASYHARPYVVDTAFLRYDYKDVFGFKAGRYEANIDFMSGSNQGWEVYYQPYKTETQKLRFWWWSSFGRGLAFNSWIYEFFATVPYLKKGGNPNNSNDFINYGWHGITTTYSYKGLDAQFFYYFAPKTYNAPGFKLVYDTNRNFENVGFRSQSMIMTTFPLYYRGWYNPETNTYSLEDSTPHGSLLGRNGVTLNIRQVFWWDNFNWSIGFYNTFGNSDAFLGSHTMPRGNNTSYIGSEISITTRHAGMIGYDFWDNTAYDGLADAITNANTFTFYTSVGGIHKRFAWHVFGRVSHANKNALGQVGRANEYSLQFNASYAFTESILLNFRITYYGARINKGYQAGYFGAPKFNNPDGDFSANYQDRSYMMTNLTLKF >NZ_CP024947.1|WP_145732904.1|1144100_1145693_+|Hop-family-adhesin-AlpB MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNPVGAEEDGGFMTFGYELGQVVQQVKNPGKIKAEELAGLLNSNTTNNANTNIASTGGNVAGTLGNLFMNQLGNLIDLYPTLDTANITQCGATSNGSSGGATTAAATSSTNPCFQGNLALYNEMVGSIKTLSQNINKNIFQGNNNTTSANLSNQLSELNTASVYLTYMNSFLNANNQAGGIFQNHTNQVYGSGVTAQQIAYILKQASITMGPSGDSGAAAAFLNAALAQHVFNSANAGNDLSAKEFTSLVQNIVNNSQNALTLANNANISNSTGYQVSYGGSIDQARSTQLLNNTTNTLAKVTALNNELKANPWLGNFAAGNSSQVNAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTYNQVNLLTYGVGTDVLYNVFSRSFGSRSLNAGFFGGIQLAGDTYISTLRNSPQLASRPTATKFQFLFDVGLRMNFGILKKDLKSHNQHSIEIGVQIPTIYNTYYKAGGAEVKYFRPYSVYWVYGYAF >NZ_CP024947.1|WP_145732902.1|1142531_1144079_+|Hop-family-adhesin-AlpA MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGAKSDELARELNADVTNNILNNNTGGNVAGALSNAFSQYLYSLLGAYPTKLNGSDVSANALLSGAVGSGTCAAAGTAGGTSLNTQSACTAAGYYWLPSLTDRILSTIGSQTNYGTNTNFPNMQQQLTYLNAGNVFFNAMNKALEAKNGTNGTSGATGSDGQTYSTQAIQYLQGQQNILNNAANLLKQDELLLEAFNSAVAANIGNKEFNSAAFTGLVQGIIDQSQAVYNELTKNTISGSAVNGAEINSNQANAVQGRASQLPNALYNAQVTLDKINALNNQVRSMPYLPQFRAGNSRATNILNGFYTKIGYKQFFGKKRNIGLRYYGFFSYNGANVGFRSTQNNVGLYTYGVGTDVLYNIFSRSYQNRSVDMGFFSGIQLAGETFQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQHTVEFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF >NZ_CP024947.1|WP_145732900.1|1139910_1141938_+|UvrD-helicase-domain-containing-protein MLETLQLNPEQLKAALASKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTNKASNEMIARVAKYFKSSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELRKLLESIVDTKNAIDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSSKNPEHTPYAALYENILDEFENTKKKHNYIDYNDLLLLFRKAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYDQSIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQRNERIYPKNLEVVKSGHFNKPTLLNYNDNIAQCQDIAKRIVMRKDFKEVAVIFRNNASADQLEAALRSHNVPSKRKGSASFFESKEVALALDICALLFNPKDIMAAIHVLSCISDIGSNTAKDIHEALMLLGNGDLKLALTHPNKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPKISLNGAKTLSDFFTLYTKAPTHSPSALIKHILESAFFQTFKTRLLKERSKNKDGSYNEFKKLQVQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSNEATQGEGVNLLSVHASKGLEFKDVYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHKPSVFLYEAGLLKPDSK >NZ_CP024947.1|WP_145733549.1|1138767_1139907_+|N-6-DNA-methylase MNNLDIKTLGQVFTPKNIVDFMLTLKHNQGSVLEPSAGDGSFLKRLKKAVGIEIDPKICPKNALCMDFFDYPLENQFDTIIGNPPYVKHKDIAPSAKEKLHYSLFDERSNLYLFFIEKAIKHLKPKGELIFITPRDFLKSTSSVKLNEWIYQEGTITHFFELGDQKIFPNAMPNCVIFRFCKGNFSRITNDGLQFLCKKGILYFLNQSYTQKLSEVFKVKVGAVSGCDKIFKNEKYGNLEFVTSITKRTNVLEKMVFVNEPNDYLLQHKDSLMQRKIKKFNENNWFEWGRMHHISPKKRIYVNTKTRQKNPFFIHQCPNYDGSILALFPYNQNLDLQNLCDKLNAINWQELGFVCDGRFLFSQRSLENALLPKDFLNLG >NZ_CP024947.1|WP_145732211.1|1163802_1164906_+|Hop-family-outer-membrane-protein-HopJ/HopK MQFQKTLFSLSLPLLLSFCIAEENGAYASVGFEYSISHAIQHNDPFLNQERIQIISNAQNKIYKLHQVKNEITNMPNTFNYINNALKNHAKLTPTEMQAEKYYFQSTLQNIEKIVMLSGGAASNPQLAQALEKMQEPITNPLEFEENLRNLEVQFAQSQNRMLSSLSSQIAAISNSLNALDPNSYSKNISSMYGVSLSVGYKHFFTKKKNQGLRYYLFYDYGYTNFGFVGNGFDGLGKMNNHLYGLGIDYLYNFIDNAQKHSSVGFYVGFALAGSSWVGSGLGMWVSETDFINNYLTNYQAKMHTSFFQIPLNFGVRVNVNRHNGFEMGLKIPLAVNSFYETHGKGLNTSLFFKRLVAFNVSYVYSF >NZ_CP024947.1|WP_001115888.1|1164973_1165180_-|4-oxalocrotonate-tautomerase-family-protein MPFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASVVVIIDEVDSNNYGLGGESVHHLRQKN >NZ_CP024947.1|WP_001099598.1|1165307_1165889_+|recombination-protein-RecR MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKMAYHLGLENPYLALKITHALENALENLKTCASCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFHLTFTKIAQGVPTGVNFENIDSVSLSRAFNSRIKA >NZ_CP024947.1|WP_145732920.1|1165885_1167031_+|tRNA-pseudouridine(13)-synthase-TruD MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEMLQIFSQILGVKIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQERNLKILSLNYHHNKIKLGHLKGNRFFMRFKKMTPLNAQKTDQVLEQIAQFGMPNYFGPQRFGKFNDNHQEGLKILQNQTKFAHQKLNAFLISSYQSYLFNALLSKRLEISKIISDFSLKENLEFFKQKNLSVDSNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELGKESERFLKKEAAPTGLLDGKKALYAKNLSLEIEKEFQHNLLSSHAKTLGSRRFFWVFAENVTSQYIKEKAQFELGFYLPKGSYASALLKEIKHEKGENNDEF >NZ_CP024947.1|WP_145732921.1|1166969_1167950_+|zinc-metalloprotease-HtpX MRARCSKKSSMRKEKIMTNFEKIIAQNRLKTNAVLATYCVIFAFIGLLVDVIRINANDLGIALFKLMTFQIFPTITIIMFLAAFVIIVVCIQNFSSIMLSGDGYKLIDPSKVLSSKENQIHRLLLELLEEAKLHFEPKLYIINAPYMNAFASGWNESNSLIALTSTLIERLDKDELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLVANFSVYFFMGNRKNSGANLARMILLVLQIILPFLTLLLQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYANNDYKGIDQNSTRSAAYLFNAEMFSTHPSIKNRIQSLSRRVI >NZ_CP024947.1|WP_145732923.1|1167950_1168493_+|GTP-cyclohydrolase-I-FolE MENFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPRVALKSAYFQGVCDEMIMAQNIEFYSTCEHHLLPFLGNISLGYIPKEKIVGISAIAKLIEIYSRRLQIQERLTTQIAETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNAIIKTSVLRGLFKKDPKTRAEFMQLLKS >NZ_CP024947.1|WP_145732925.1|1168508_1169420_+|polyprenyl-synthetase-family-protein MNNPNLSFYYNECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGQKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNSLLESHIVVELVKILSVNGGIKGMVLGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASGIKDEELFKWLQAFGLKTGLCFQVLDDIIDVTQDEEESGKTTHLDSTKNSFVNLLGLERANDYAQTLKTEVLNDLNLLKTAYPLLQENLNALLNTLFKGKT >NZ_CP024947.1|WP_145732927.1|1169416_1170220_+|5'/3'-nucleotidase-SurE MKKILLTNDDGYHAKGIKALEQALEEMAEIYVVAPKHEKSACSQCITITAPLRAEKIKGKEGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQSVFTKGYPLKGRKLLNVNVPNCSLQEYQGECITPKGYRLYKKEVHKRTDPKNESYFWLGLHPLEWQKRENEDRLSDFDAIASNHASITPLNLDLTSYDDLKSLESWHKGMLK >NZ_CP024947.1|WP_000037494.1|1170216_1170876_+|hypothetical-protein MSKKHRLAFLGLIVGVLFFFSACEHRLHMGYYSEVTGDYLFNYNSTIVVAYDRSDAMTSYYINVIVYELQKLGFYNVFTQAEFPLDKAKNVIYARIVRNISAVPFYQYNYQLIDQVNKPCYFLGGQFYCSQTPTDYYAINGFSEQILMSANSHFILDWYDVVLQKRVLYVDGSVSGRTCGYQMLYRDLIKSTIKRIDFNRPERYYYNLRLPLYQPCYRQ >NZ_CP024947.1|WP_145732929.1|1170879_1171482_+|6-pyruvoyl-tetrahydropterin-synthase-family-protein MVIRRLYKFCASHVVRNCSSVKCAQNIHGHNYEVEVFIETNRLDNANMALDFGLMQQEMQVFIESFDHAHHFWDKESDEFQRFIENHCVRYVKCSFNLSAEGYALMFLYYLTRILQKSVFSNDEGELKVSSVRVHETKNGYAESFLKDLENPHFKSLVHNHCVSFSQGIQNLWHDKDFFNKIVSDEKQCFFHAKPLHQIP |
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| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
|---|
| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
|---|---|---|---|---|---|---|---|---|
| NZ_CP024947_2 | 2.2|1157497|26|NZ_CP024947|PILER-CR | 1157497-1157522 | 26 | NZ_CP010123 | Escherichia coli strain C5 plasmid A, complete genome | 183240-183265 | 5 | 0.808 |
| NZ_CP024947_2 | 2.4|1157491|27|NZ_CP024947|CRISPRCasFinder | 1157491-1157517 | 27 | NZ_CP010123 | Escherichia coli strain C5 plasmid A, complete genome | 183240-183266 | 6 | 0.778 |
1. spacer 2.2|1157497|26|NZ_CP024947|PILER-CR matches to NZ_CP010123 (Escherichia coli strain C5 plasmid A, complete genome) position: , mismatch: 5, identity: 0.808
ggcaacgccagctttgataacgacac CRISPR spacer tcaagcgccagctttgatatcgacac Protospacer *.************** ******
2. spacer 2.4|1157491|27|NZ_CP024947|CRISPRCasFinder matches to NZ_CP010123 (Escherichia coli strain C5 plasmid A, complete genome) position: , mismatch: 6, identity: 0.778
ggcaacgccagctttgataacgacacc CRISPR spacer tcaagcgccagctttgatatcgacacg Protospacer *.************** ******
| Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DBSCAN-SWA_1 |
382806 : 392795
Sequences of DBSCAN-SWA_1
Nucleotide sequences of DBSCAN-SWA_1 >NZ_CP024947|382806:392795|DBSCAN-SWA AATGAGCAAATATAATTGTATAGATTTATTTAGTGGGGCTGGTGGTTTATCATTGGGTTTTGCGAATACAAATAGATTTAATATTTTAGCCCACATTGAGTGGGAAAAACCTATGGTTGCTACACTGAGAAATGCTTTAATCAAACGCTTTAAAATCAGTGAATATGAGGCAAAAAAGAGAGTTATTAAATTTGATATTCAAAAAACGGATGAATTGATAAATGGCTCTTGGAGTGGTGAAACTCTTAAAATTTATGGATCTGATAATGATGAAAGCGTTAGCCAATTTGGGTTAAATGGCGTAATTAGTGGTAAAAAAATAGATGTTATCTTTGGCGGTCCTCCTTGTCAAGCTTATTCTCTTGTGGGTAGAGCGCAAGATAAACACTCTATGAAATATGATTATAGGAATTATCTTTTTGAAAGTTTTGTTAAGATAGTTGATTATTACCAACCACAATGCTTTGTGTTTGAAAATGTTCCTGGCATGCTTAGTGCAAAACCGGGCAATCAATTTGTAAAAGATAGGATTTATGAATCTTTTTCAAAAATAGGGTATGAAATTAAAAAACCAAATGAAATGAAAGAGATAATCTATTCTAGCGATGATTATGAAGTCCCACAAACTAGAAAACGAGTAATTATATTTGGCGTTCGTAAAGATAATAAAGAATGGTTATTCAAATTTTATCAAAATTTAGACAATCTCAAATCAAAAAAACCACCACTTACCGTTAGAGACGCTATTGGCCATTTACCCAAGTTTAGACCGCTCAAAACACCCCTAAAAACTAGCAATAAAAACATTTCTCACGAACTTATTGGTGCAAATAATTTGACACAAAATTTTCCACGATATAATAATTTACGAGATTTAAAAGCGATGGAATTTTGGATTGAAAACAACATGAATAACGCTTCTGCAAAAGAAAAGCTTGACTTTTACACTAAAATTACGGGAAAAGTCTCAAGCCATAACAAATACAGAAATTTAGAATGGGATAAACCATCGCCAACCTTAGTGGCGCATTTGCAAAAAGATGGTTTTATGTTTATACACCCAGAAGCCAATCAAAGCCGCTCTATCACCATAAGAGAAGCAGCAATCTTGCAGACTTTCCCTAATGATTTTGAATTTATCGGATCGCAAGCGGCTTGTTTTAAAATGATAGGCAATGCAGTGCCAGTTAATTTTGCTAAAAATATAGCCCTAGCAGTGGCAAAGGTTTTAGATGAAAAAAACTAATATAAATATTTTAGTAGCTTGTGAAGAAAGCCAAAGGGTGTGCAATGAATTAGAAAGCTTGGTTTCAACGCTTATAGTTGTGATTTATTAGAGTGTAGTGGCGGGCATCCTGAGTGGCATTTTAATTGCGATGTTTTTGAAGTGATTGGAAATAAAGGCGGTGTTTTGCAAAATGGCAAACAAGCAAAAGTTTCGCGATGGGATATGATGATAGCGCACCCGCCTTGCACTTTTTTAGCTGTTAGTGGAGCGAAGTGGTATTACCACCCTAAAGATAAAGATTTGCCCATAGAACAAAAAAGACCCCACCCCAAATTCCCCAACCGCACAAAAGACAGAGAGGAAGCTTCAAAATTCTTTATGGATTTAGTGGAAGCAAAAATCCCTTATATTGCAATAGAAAACCCCATTGGCATAATGAATACAAGATACAAAAAGCCCGATCAAATAGTCCAACCTTACCACTTTGGCGATAGCGCATCAAAAAAGACTTGTTTGTGGCTTAAAAACTTACCACCCTTAAAATACACAAACATCGTTGATCCTGGCGAGTTTATAGAATTTAAAAGCGGTAAAAAAATAGCAAAATGGTATAGCGATGGACTGACTAAAACAAAATCAGCTAAAGAGCGTCAAATTTGGAGGAGTAAAACATTTCCAGGGTTTGCAAAGGCGATGGCAGAGCAGTGGGGAGAGTTTGTAAAAAATGAGATGTTTAAAAAGGTGAAAAATGAAAGTTTATTTAAGGAAAATTGATAATCAAATATTACATAATAAACGAATCAGTATTAAAAAAGGTATTTTAGAGCATTTTTTTGATAAGGCCAACAACCAAGACGAAGTAGATATGAGGGGTATCTTATCTAACTATAACGATAAAGTTAGTATCCTCTTAGCAACAGATCCTAGACTTGGTGGAGGAATTAAGAGAATCATTAATGCAGAAGCTGATAAAATAAAAGAAAACCGATTGGATTATGAATTAAAAATTGATGATATTCTGCTTTTTACTTACATATCTTCTAAAAAATACACATTAGAAATCATTTTACCCACTGATACAAGATACAATGTTTTAAATGGCTTAATCAGTAATAGCAAGCATTTATTGGTTTTTAGTGAGAATGAAACGAGTCTTTTAGATGATAGTAAAATAGATGAAAGCGTTAGAATAGATGGGGGAAAAAATATCATCCTTTATGGTGTTCCTGGTAGCGGCAAAAGTTATACTTTACAAAGAGATTATTGCAATGATAATAGTGTGGTAGAAAAGATAGTGTTCCATCCTGACTATTCTTATAGTGATTTTGTGGGACAGATTATGCCAAGTGTGGATGATGGCGGTATCGTTAGTTATAAATTTAATCCTGGACCTTTTACAAACATCCTAAAAAAAGCGTATCATAACCCACAAATTAAGCATGTTCTAGTGATTGATGAAATCAATCGTGGTAACGCACCTGCCATATTTGGAGAAGTTTTTCAACTTCTTGATAGGCTTAAACATGACAAAGGTGGCTTTAAAAAAGGCTCTAGTGAGTATGCTATCAATAATATGGATATTGCAAATATTGTCCATAACGATAAAAATGCAAGGATAAGAATCCCATCAAATTTATGGATAATCGCTACAATGAATACGAGCGATCAAAATGTATTCACACTAGATACTGCTTTTCAGCGTAGATTTTCTATGCAACTCATTGAAAATTCCTTTGAAAATGTTGATGATGGTTTTAAAAATATGAAAATTTTAGATACTGATATTACTTGGCAAAAATTTTGCACCACCATCAATGAAAAAATAGCTCAAAACAACGAGGGGCTGAGTTCTATGGAGGATAAGCGATTTGGCGTTTATTTTGTGGATATTGATGATCTAAAGAACAAAGAAAATTTTGCGCATAAAGTCATCAAATACCTTTGGGACGATGTCTTTAAATTTGATAGAAATATCATATTTAATACTACAAAATTTAATACGCTTGAATCTGTTGTAAAGAATTTTACCAAAGAAAAAGGCAGAACCCAATTTGATATTTTTAGCGATGATATAAAAGAACTTTTATTCTATGTTTAATTTAAAAGAGCGCTGTTTTACAGACAATGAATTGAACGACAATTTTGTAGGCATTAGAAGTATCAATAATGATTTACAAATTTGTTTCCCATTAGGATTTGATATAAGCGATGATAAAAACATTAGAGCAGATATAAAAAATCTTATTTCTATTCTTTTAGAATATAATAAAACAATTGCATGTGAAAATTTGTTAAATAATAAAAATGAGATTATAAGATCAAATTTTCCACTCACAGCGTATAAAAATGTCATAGAATATTTTTTATCGCATGGTTATTATGCAGAGAATAAAAGCTATTATGAAAATAGCGCAAAAGGTAAAATAAATTTTTCCAAAACGATGAAGAAAAACGGACCCATTATTCAAACTTTTAACAATAAAAACTCTTTTGTCTATACTCGTTTTCAAGTTAAAAGGAAAATGATCAATGAAAATGAATTGATAACAGCGATAAACAAATATTGTGTGCATGAAGCGTTTTCTAAATTTGGCTTTGTGTTTAGCTCGTTTATGCCACCAAGATTTAACCTTCCCACTGATAAAAATTATTGCATTTATCGGCTTGAAAACAGGCTGAACAACACATTTAATGATGACAGGAAAATCCTTTTTCAATCTATGAAAAATATTCTTTTACAAGATGATAATATTTTGGATAAGACTGATTTTAAATTTGGAACATATCATTTTTATGTTGTTTGGGAAAGAATGATAGACAAGGCATTTGGTATAAAAAATAAAGAAGTTTATTTTCCTAAAACAAAATGGAATTTGCGGTACTCTGATCAAAACCCTGATTATTTATTGCAACCAGATAGCATCATGCTGTTTAATGATAAAATTTACATATTAGATGCAAAATATTATAAATATGGCATAAGCGGGGTTGCAAGCGATTTACCCAGTAGCACATCCATCATAAAACAGATTGTTTATGGTGAATATGCGGCAAAACGAGAAACAAAAAAAGAGATTTATAATATCTTTTTAATGCCATTCAACAGATTTAACAATCCGCTAAAATTGAGTAATATTTTTGAAAATATAGGCTTTGCAAATGGAGAGTGGAGAGACAATCTGAAACAATATGAAAATATACAAGGAATTTTAATGGACACTAAATTTTTAATGCAAAATTATAACAAGAAATCCAATGATCTTTTAAAATTACTAGCAAAAAATGTTGAAGAAACTAAAATATAATTTTTAAAAATTTTAGTCAAAAATCAAATCTAAAACCACAAAACAAAATTAAAAACCTCCATTTTTTAATCAAACCTGCAATGGGCGTTCTATATCATCAGCGTTTAAAGGGGTGTTGGCTTTCAAGAATTTTGATGCCTTTTGGCCTAAAATTTCTTTATAAAATTTAGGGTGTAAGCCAAGGTTGGGGCGTAAGGCTTTGATATTGTCGCTAGTCAATGCTTCGCCTTTTTGAATATCCTTAATGACAAATAAAGAGCGCATAAAGAATCTTCGCTCCTCTAAAGTCTTTGGATTGATTTTAGGCTCTTCTTCGCCTAAGGCTAAAACGCTTTGCTTGATGGCTTCAACCATGCTTTTAAATCCGTTAAAATCCATGCTAAAAGCGCTGTCTGGGGTTTGTAAGGATTTGTTTAAAATGAAATGCTTTTCTATCATGCTCGCTCCTAAAGTGGTGGCTAAAATGGGGCAAAGAGAGCCAATCGTGTGATCGCTCAAGCCAAATTTAACGCCAAAGGTTTCGCCTAATTTAACCATGCTTAATAGGTTAGCGTCTTCTATTTGGCTGGGATAAGCGCTCACGCATTTTAAAAGGGTGATGTCAAAATTACCCACTCCTTTGCACAACGAGATAGCGTCTTGCAATTCGGTGTGTGTGGCGATACCGCTAGAAAGGATAATGGGCTTTTTTGTGCGAGCGGCCTTTTCAATCAAGTCTAAATCAACGATTTCAAAACTAGCGATTTTATACATGGGGCAATTTAGGCTCTCTAAAAGCTCTAAAGCTTTTGAACTAAAAGGCGAGCTAAAAATGCCTAAATCAAGCTTTCTAGCCAATTCAAACAATTCCGTATGCCATTCTAGGGGGGTAGAAGCCTTTTGATACAATTCATACAAATTTTCTTTATCCCATAAAGTGCCTTGAATGATGAAGGGATCTTCTTTAGAGTTTAAAGTCATGCAGCTTGGCGTGTAGGTTTGGAGCTTGACAAAATCCGCCCCGCTTTCCTTAATGGCATGAAGGCTTTCTTTAGCTAGGTTTAAATCCTGGTTATGGTTAGCGCTCAATTCAGCGACAATTTTAGGGCGTTGTAACATTTCTTATTTTTCCTTAATCAAAACTTCTTTTTCTAAGCGATAGACTTGAGAGCAAGTGAAAGCCAAATGCTCATCATGCGTGGCTAAAACTAACGCCCCTTCTTTTTCTGTAATGTAATTTTGCAGCATGCTGATGACTTGATTAGCGCTAGTGGTGTCTAAATTCCCGGTGGGTTCATCAGCGATAATGATTTTAGGCTTTTTAGAAAGCACTCTGGCGATGCTTAAGCGTTGTTGCTGGCCGCCGCTCAATTCACCCACGCCTTGTTTTAGGGTGTGGGCTATGCCTAATTGTTCTAAAAGGGAATGATTTATTTCTTGCTTGGCTAGGATGGAAGCGACTTGCAAGTTTTCTAAAGCGCTAAAACCCTTAAAAAGGTAATGCGATTGGAAGATTATGCCCACTTTTAAGCGCCGTAATTCCAAAAGCTTTTTGGAATTTAAGGCATAAATATCCTGGTATTCTAACAAACTAATCGTACCACTATCCGGTTTTAACATGGTGGCTAAATGGCTTAAAAGCGTGCTTTTACCGCTCCCGCTCACGCCTAAAATCGCTAGGCTTTCTTTGGGCTTGATGTGCAAATTCACGCCATTATAAAGAGGCTTTTCAAAAGCATGAGAAATATTAATCGCTTTAATCATGATCGTTTCCTGAAAAGAATATCGCCTAATAAACTAGGGTTTAGAATGTAAGAAGTTGAAAAGTTCGCGCTGTGCAAGATGATTTTATCATAACGCCTTGCATAGTATTTTAAAAGCGTTTTTTGTAAAGTGGGTTCAATGCTTGGGCTAAACCATGCGTTATTGCTCATCACGATAAAAATTTTTGAAGGGCTGTTTGAATAAGCGGGTTTGGAGGTGCCTTCATAGCAAATCAGGGGGCGAAAAGTGAAATCGTCTAATGTGAAATCGCTGAAATGAGAAGCGTTGCGGTATAAATAAGCGCTCTCGCCAAAAAAGAGTTTTTCAAGGGGTTTTTGAAGAAACTTGGGTAAAGGCATCGTCTCGCCAAAGGGGGCTAAAACCACTTTATCAGCGATCTGAACGCTTTCTTTAGCAAATAAAAACGAGCTGTTATAAAGGCTATAGCCTTGAGTCCGTAATGTCCCTATTAAAATAGCAATATTACCGCTTAAATCTTCTAGTTTAGCTTTAAAGGGGGAATTTTCTAAAAGGATGGGGTAGGCGGTCTCTGGAAAAACAATCAAGGTTTTTTGCTTGCTTTGAGCGAGCTTGATTTCTTTAAGAATGTTGTTTTCAATATCGTTAAGGTAATTTGAGTCAAATTTCACATCTTGGGGCGTTTTTGTGGAGACTAATTCAATATTTCCAACCTTTTTTAAATCGCTTGTTTTAAAACCATTAAAATCCACCGCGCCCAGTAACAATAAAACCGCTATGATCCTGTATTTTTTCAATGGTTTAGCGCTCAAAAAAATGCAAGCCAAAAAAACAAGCCCTAGCGATAATTTATCCACCCTAAACACGCTATAAGAAAAAAAGCTATCCGGGACTAACCAATCAAATCCAAAAGGGTGGATAAAACTAGAGCCTAAAAAACTCAAAAGCCTGAAGTAGGGGTTTTCAAAATAGAGCAACAAATAAAATAAAACCCCATAAACTAACGCTATTAAAACAATGATTAAGGGTAATAAATAAGTGAAATCCGAGTAGCGGAAGCTTAAAGCGCACCAATAAAACAATAACGCTCCCACAAAAAACCCCAAAGCAAAAGCGCTATTCTTTGGGGTTTTTAAAAACGCTAGCATGCTTAAAGGGGCTAATAGGCTTGTGAGTGTGATAGGAATATAGGGGTTTTCAATTGCATAAGCGTCTAAAACAGCGTTCACATACACGCTTGAAACAAACATGCACGCCAATAAAAAAGCGTTTTGATTGAACAGAATAAGACGCATGGCTAAATTTTGAAACCTTGAGATTGTTTTAGTGTATTATAGCTATATTTTAATTTAAGAATTTTAGATTGATTTTTTTAAGGGTAGTTTTTTTTAAGTTGTGTTATTATTTTCAAATTTCAAGTCTAAAGAGCGTGAATTGGCATGATTTAAGAGTAATGGGTGTTTTTGAGCGCTCACTATCTTTATGCGAATATATGAGAGAAAGGTTTGGGTTTAGGGTTTGAACTATATTGATTTGGCGTTACTTGTGGTGGTGGTAGCCTTTGGGATTAGGGGGTTTTATCATGGCTTCGTGAGTGAAGTGGCGGGGACTTTAGGGATTGTGCTTGGCGTGTATTTGGCGTCTCGCTATTCTGTGGCTGTTGGGAATTTATTTTCAGAGCATTTGTATGATTTAAGAAATGAAACCATGACGAATCTCATCGGTTTTTTGTTGGTGTTAGCGTCTATTTGGGTGTTTTTTTTAGCTTTTGGAGTGTTGCTAGGCAAGGTGTTAGTCTTTAGCGGGTTAGGCGTTATAGACAAAGCGTTAGGGTTTATTTTTTCATGCTTGAAGACTTTTTTAGTGCTTTCTTTCATCCTTTATGCGCTCTCTAAAATGGAAGTGATGAAAGACGCTAACGCTTACTTGCAAGAAAAAAGCGCTTTTTTTTCTACCATGAAAAGCGTCGCTAGCAAGATCATGCGCCTTGATGGCGTCAAACATGTGGAGCAAAACCTTAAAGACAACCTTGAAGAAATGAGCGATGAAGTCAAAAATAAAGAATCTTTCAATAAAAATAAAGAGTCTTTTAATAAAGCAATGGATAAGGGCGTGGAATCTTTAAAAGAAAAGGCTAAAGATTTGCCTAAAAACATGTTAGATCCAAAAGCTAACCAAACCCCACCAAACCCTACCCCATCTAATAAAGAACCCCTATAAAGGCATAACATGTTTTCTAACCAATACATCCAACAACGCATCCATAAAGCCAACAGCTTGAGAGAAGAAGGGAAAAACCCTTATCAAAATGGCTTGAAACGAAGCCTTACAAACGCCGCTTTTTTAGAAAAATACGCTTATGTTAAGGATTTAGAAGAGCCTAAAGACAAAGAAAAATGCGAGAGTATTGTAGGGAGGGTCAAGCTTTTGCGTTTAATGGGTAAGGCTTGTTTTATTAAAATTGAAGATGAAAGCGCGATTTTGCAAGCTTATGTTTCGCAAAATGAATTGAATGATGAGTTTAAAAGCCTGAAAAAGCATTTAGAAGTGGGCGATATTGTGTTGGTGAAAGGTTTCCCTTTTGCTACCAAAACCGGTGAATTAAGCATTCATGCCCTAGAATTTCATATTTTAAGCAAAACCATTGTGCCTTTACCTGAAAAGTTTCATGGACTGAGCGATATAGAATTGCGTTACCGCCAGCGCTACTTGGATTTGATCGTCAATCCTGGCGTTAAAGATGTGTTTAAAAAGCGCAGTTTGATTGTCTCTAGCGTGCGGAAATTCTTTGAAATGGAAGGGTTTTTGGAAGTGGAAACCCCTATGATGCACCCCATTCCTGGCGGGGCGAACGCAAGGCCTTTTATCACTTATCACAACGCTTTAGAAGTTGAAAGGTATTTGAGAATCGCTCCAGAATTATACCTCAAACGCTTGATTGTAGGGGGGTTTGAAGCGGTGTTTGAAATCAATCGTAATTTCAGGAATGAGGGCATGGATCACAGCCATAACCCCGAATTTACGATGATTGAGTTTTATTGGGCGTATCACACTTATGAAGATTTGATTGAACTCAGTAAGAGGCTGTTTGACTACTTGCTAAAGACTTTAAATTTGGATTCAAAAATCATTTATAACGATATGGAAGTGGATTTCAACCAAACGAGCGTGATTTCCTATCTGGACGCTTTAGAAACGATAGGGGGCATTAGTAGGGGTATTTTAGAAAAAGAAGACAGGCTTTTGGCTTATTTGTTAGAGCAAGGCGTCAAAATAGAGTCAAATCTCACTTATGGTAAATTGCTCGCTGAAGCGTTTGATCATTTTGTAGAGCATAAGCTTATTAACCCCACTTTTGTAACCCAATACCCCATTGAGATTAGCCCCTTAGCCAGACGCAACGATAGTAACCCTAATATTGCTGACAGGTTTGAATTGTTCATTGCAGGAAAAGAAATCGCTAACGGCTTTAGCGAGTTGAACGATCCTTTAGATCAATTAGAACGCTTTAAAAATCAAGTGGCTGAAAAAGAAAAAGGCGATGAAGAAGCCCAATACATGGATGAAGATTACGTGTGGGCCCTAGCCCATGGAATGCCCCCAACCGCAGGGCAAGGCATAGGCATTGATAGATTAGTGATGCTACTCACTGGAGCTAAAAGCATTAAAGACGTGATTTTATTCCCAGCGATGCGTTCTGTTAAAAACGATTTTAATGTGGAGAGTGAAGAATAA
Protein sequences of DBSCAN-SWA_1 >NZ_CP024947|382806:392795|391289_392795_+|WP_145731872.1|tRNA|DBSCAN-SWA MFSNQYIQQRIHKANSLREEGKNPYQNGLKRSLTNAAFLEKYAYVKDLEEPKDKEKCESIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFATKTGELSIHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEVERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVISYLDALETIGGISRGILEKEDRLLAYLLEQGVKIESNLTYGKLLAEAFDHFVEHKLINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMRSVKNDFNVESEE >NZ_CP024947|382806:392795|384333_384807_+|WP_145733509.1|DBSCAN-SWA MPIEQKRPHPKFPNRTKDREEASKFFMDLVEAKIPYIAIENPIGIMNTRYKKPDQIVQPYHFGDSASKKTCLWLKNLPPLKYTNIVDPGEFIEFKSGKKIAKWYSDGLTKTKSAKERQIWRSKTFPGFAKAMAEQWGEFVKNEMFKKVKNESLFKEN >NZ_CP024947|382806:392795|382806_384051_+|WP_145731858.1|DBSCAN-SWA MSKYNCIDLFSGAGGLSLGFANTNRFNILAHIEWEKPMVATLRNALIKRFKISEYEAKKRVIKFDIQKTDELINGSWSGETLKIYGSDNDESVSQFGLNGVISGKKIDVIFGGPPCQAYSLVGRAQDKHSMKYDYRNYLFESFVKIVDYYQPQCFVFENVPGMLSAKPGNQFVKDRIYESFSKIGYEIKKPNEMKEIIYSSDDYEVPQTRKRVIIFGVRKDNKEWLFKFYQNLDNLKSKKPPLTVRDAIGHLPKFRPLKTPLKTSNKNISHELIGANNLTQNFPRYNNLRDLKAMEFWIENNMNNASAKEKLDFYTKITGKVSSHNKYRNLEWDKPSPTLVAHLQKDGFMFIHPEANQSRSITIREAAILQTFPNDFEFIGSQAACFKMIGNAVPVNFAKNIALAVAKVLDEKN >NZ_CP024947|382806:392795|384781_386131_+|WP_145731860.1|DBSCAN-SWA MKVYLRKIDNQILHNKRISIKKGILEHFFDKANNQDEVDMRGILSNYNDKVSILLATDPRLGGGIKRIINAEADKIKENRLDYELKIDDILLFTYISSKKYTLEIILPTDTRYNVLNGLISNSKHLLVFSENETSLLDDSKIDESVRIDGGKNIILYGVPGSGKSYTLQRDYCNDNSVVEKIVFHPDYSYSDFVGQIMPSVDDGGIVSYKFNPGPFTNILKKAYHNPQIKHVLVIDEINRGNAPAIFGEVFQLLDRLKHDKGGFKKGSSEYAINNMDIANIVHNDKNARIRIPSNLWIIATMNTSDQNVFTLDTAFQRRFSMQLIENSFENVDDGFKNMKILDTDITWQKFCTTINEKIAQNNEGLSSMEDKRFGVYFVDIDDLKNKENFAHKVIKYLWDDVFKFDRNIIFNTTKFNTLESVVKNFTKEKGRTQFDIFSDDIKELLFYV >NZ_CP024947|382806:392795|387407_388436_-|WP_145731864.1|DBSCAN-SWA MLQRPKIVAELSANHNQDLNLAKESLHAIKESGADFVKLQTYTPSCMTLNSKEDPFIIQGTLWDKENLYELYQKASTPLEWHTELFELARKLDLGIFSSPFSSKALELLESLNCPMYKIASFEIVDLDLIEKAARTKKPIILSSGIATHTELQDAISLCKGVGNFDITLLKCVSAYPSQIEDANLLSMVKLGETFGVKFGLSDHTIGSLCPILATTLGASMIEKHFILNKSLQTPDSAFSMDFNGFKSMVEAIKQSVLALGEEEPKINPKTLEERRFFMRSLFVIKDIQKGEALTSDNIKALRPNLGLHPKFYKEILGQKASKFLKANTPLNADDIERPLQV >NZ_CP024947|382806:392795|386123_387338_+|WP_145731862.1|DBSCAN-SWA MFNLKERCFTDNELNDNFVGIRSINNDLQICFPLGFDISDDKNIRADIKNLISILLEYNKTIACENLLNNKNEIIRSNFPLTAYKNVIEYFLSHGYYAENKSYYENSAKGKINFSKTMKKNGPIIQTFNNKNSFVYTRFQVKRKMINENELITAINKYCVHEAFSKFGFVFSSFMPPRFNLPTDKNYCIYRLENRLNNTFNDDRKILFQSMKNILLQDDNILDKTDFKFGTYHFYVVWERMIDKAFGIKNKEVYFPKTKWNLRYSDQNPDYLLQPDSIMLFNDKIYILDAKYYKYGISGVASDLPSSTSIIKQIVYGEYAAKRETKKEIYNIFLMPFNRFNNPLKLSNIFENIGFANGEWRDNLKQYENIQGILMDTKFLMQNYNKKSNDLLKLLAKNVEETKI >NZ_CP024947|382806:392795|388439_389081_-|WP_145731866.1|DBSCAN-SWA MIKAINISHAFEKPLYNGVNLHIKPKESLAILGVSGSGKSTLLSHLATMLKPDSGTISLLEYQDIYALNSKKLLELRRLKVGIIFQSHYLFKGFSALENLQVASILAKQEINHSLLEQLGIAHTLKQGVGELSGGQQQRLSIARVLSKKPKIIIADEPTGNLDTTSANQVISMLQNYITEKEGALVLATHDEHLAFTCSQVYRLEKEVLIKEK >NZ_CP024947|382806:392795|389077_390355_-|WP_145731868.1|DBSCAN-SWA MRLILFNQNAFLLACMFVSSVYVNAVLDAYAIENPYIPITLTSLLAPLSMLAFLKTPKNSAFALGFFVGALLFYWCALSFRYSDFTYLLPLIIVLIALVYGVLFYLLLYFENPYFRLLSFLGSSFIHPFGFDWLVPDSFFSYSVFRVDKLSLGLVFLACIFLSAKPLKKYRIIAVLLLLGAVDFNGFKTSDLKKVGNIELVSTKTPQDVKFDSNYLNDIENNILKEIKLAQSKQKTLIVFPETAYPILLENSPFKAKLEDLSGNIAILIGTLRTQGYSLYNSSFLFAKESVQIADKVVLAPFGETMPLPKFLQKPLEKLFFGESAYLYRNASHFSDFTLDDFTFRPLICYEGTSKPAYSNSPSKIFIVMSNNAWFSPSIEPTLQKTLLKYYARRYDKIILHSANFSTSYILNPSLLGDILFRKRS >NZ_CP024947|382806:392795|390578_391280_+|WP_145731870.1|DBSCAN-SWA MNYIDLALLVVVVAFGIRGFYHGFVSEVAGTLGIVLGVYLASRYSVAVGNLFSEHLYDLRNETMTNLIGFLLVLASIWVFFLAFGVLLGKVLVFSGLGVIDKALGFIFSCLKTFLVLSFILYALSKMEVMKDANAYLQEKSAFFSTMKSVASKIMRLDGVKHVEQNLKDNLEEMSDEVKNKESFNKNKESFNKAMDKGVESLKEKAKDLPKNMLDPKANQTPPNPTPSNKEPL |
9 | Streptococcus_phage(42.86%) | tRNA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
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| Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
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