CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP042266	Streptomyces sp. SSL-25 chromosome, complete genome	16 crisprs	RT,WYL,DEDDh,cas4,c2c9_V-U4,casR,cas6,cas7,cas5,cas3,cas1,cas2,cas6e,cse2gr11,cas8e,csa3,DinG	1	41	3	0

1. NZ_CP042266

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042266_1

• CRISPR_ID: NZ_CP042266_1
• CRISPR_location: 325975-326180
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NZ_CP042266_1

Consensus_repeat	Method
GGGACCATCCCCGCGCCTGCGGGGAGC	PILER-CR
GGACCATCCCCGCGCCTGCGGGG	CRISPRCasFinder

spacers of NZ_CP042266_1

>1.1|326002|34|NZ_CP042266|PILER-CR
GCTACGTCGACGAGGCGACGCTACTTCCCGAAGC
>1.2|326063|36|NZ_CP042266|PILER-CR
CACGAACACCGTCCCCCTCAGCCACCGCACCGAGTT
>1.3|325999|38|NZ_CP042266|CRISPRCasFinder
AGCGCTACGTCGACGAGGCGACGCTACTTCCCGAAGCG
>1.4|326060|37|NZ_CP042266|CRISPRCasFinder
CACGAACACCGTCCCCCTCAGCCACCGCACCGAGTTC
>1.5|326120|38|NZ_CP042266|CRISPRCasFinder
AGCACTTGTCCGCCAGGTTGATACGGCGGGCCTGGTCG

CRISPR arrays and Neighbor proteins around NZ_CP042266_1

CRISPR arrays

The CRISPR arrays of NZ_CP042266_1

>merge|NZ_CP042266|1|325975-326180|PILER-CR,CRISPRCasFinder
GGGACCATCCCCGCGCCTGCGGGGAGCGCTACGTCGACGAGGCGACGCTACTTCCCGAAGCGGGACCATCCCCGCGCCTGCGGGGCACGAACACCGTCCCCCTCAGCCACCGCACCGAGTTCGGACCATCCCCGCACCTGCGGGGAGCACTTGTCCGCCAGGTTGATACGGCGGGCCTGGTCGGGACCATCCCCGCACCGCGGGGT

>NZ_CP042266|1|1|325975-326122|PILER-CR
GGGACCATCCCCGCGCCTGCGGGGAGC	GCTACGTCGACGAGGCGACGCTACTTCCCGAAGC
GGGACCATCCCCGCGCCTGCGGGGCAC	GAACACCGTCCCCCTCAGCCACCGCACCGAGTTCGG
ACCATCCCCGCACCTGCGGGGAGC

>NZ_CP042266|1|1|325976-326180|CRISPRCasFinder
GGACCATCCCCGCGCCTGCGGGG	AGCGCTACGTCGACGAGGCGACGCTACTTCCCGAAGCG
GGACCATCCCCGCGCCTGCGGGG	CACGAACACCGTCCCCCTCAGCCACCGCACCGAGTTC
GGACCATCCCCGCACCTGCGGGG	AGCACTTGTCCGCCAGGTTGATACGGCGGGCCTGGTCG
GGACCATCCCCGCACCGCGGGGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146478627.1|315215_316103_-|metal-ABC-transporter-permease	unknown	unknown	gnl|CDD|224033
NZ_CP042266.1|WP_146478635.1|323706_325221_+|MFS-transporter	unknown	unknown	gnl|CDD|184957
NZ_CP042266.1|WP_146478642.1|333741_334284_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|226426
NZ_CP042266.1|WP_146478646.1|336660_336876_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146478639.1|331047_331776_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146478628.1|316153_316870_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224046
NZ_CP042266.1|WP_146478629.1|317187_318378_-|acyl-CoA-dehydrogenase	unknown	unknown	gnl|CDD|173841
NZ_CP042266.1|WP_146478630.1|318573_319656_+|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl|CDD|235533
NZ_CP042266.1|WP_146478637.1|326323_328867_-|phosphoenolpyruvate-synthase	unknown	unknown	gnl|CDD|235751
NZ_CP042266.1|WP_146478634.1|322751_323603_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|375319
NZ_CP042266.1|WP_146478641.1|333318_333663_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146478632.1|321078_321375_+|heme-binding-protein	unknown	unknown	gnl|CDD|377163
NZ_CP042266.1|WP_146478640.1|332028_333024_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|236612
NZ_CP042266.1|WP_146478631.1|319803_320844_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|181818
NZ_CP042266.1|WP_146478644.1|335223_336132_-|SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|252734
NZ_CP042266.1|WP_146478645.1|336017_336668_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146478643.1|334816_335227_-|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|239217
NZ_CP042266.1|WP_146478636.1|325324_325894_-|phosphotransferase	unknown	unknown	gnl|CDD|270704
NZ_CP042266.1|WP_146478633.1|321580_322627_+|DUF4440-domain-containing-protein	unknown	unknown	gnl|CDD|188314
NZ_CP042266.1|WP_146478638.1|329145_330855_-|WD40-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|238121

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146478627.1|315215_316103_-|metal-ABC-transporter-permease	gnl|CDD|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	1.17469e-63
NZ_CP042266.1|WP_146478635.1|323706_325221_+|MFS-transporter	gnl|CDD|184957	PRK14995, PRK14995, SmvA family efflux MFS transporter.	2.60597e-58
NZ_CP042266.1|WP_146478642.1|333741_334284_-|AAA-family-ATPase	gnl|CDD|226426	COG3911, COG3911, Predicted ATPase [General function prediction only].	3.69455e-33
NZ_CP042266.1|WP_146478628.1|316153_316870_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	9.76802e-70
NZ_CP042266.1|WP_146478629.1|317187_318378_-|acyl-CoA-dehydrogenase	gnl|CDD|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	1.07404e-126
NZ_CP042266.1|WP_146478630.1|318573_319656_+|enoyl-CoA-hydratase/isomerase-family-protein	gnl|CDD|235533	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional.	2.29007e-174
NZ_CP042266.1|WP_146478637.1|326323_328867_-|phosphoenolpyruvate-synthase	gnl|CDD|235751	PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated.	0
NZ_CP042266.1|WP_146478634.1|322751_323603_-|helix-turn-helix-domain-containing-protein	gnl|CDD|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	7.67196e-45
NZ_CP042266.1|WP_146478632.1|321078_321375_+|heme-binding-protein	gnl|CDD|377163	pfam03928, Haem_degrading, Haem-degrading. Haem_bdg is a bacterial protein that is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein.	1.17155e-21
NZ_CP042266.1|WP_146478640.1|332028_333024_+|helix-turn-helix-domain-containing-protein	gnl|CDD|236612	PRK09685, PRK09685, DNA-binding transcriptional activator FeaR; Provisional.	8.84711e-23
NZ_CP042266.1|WP_146478631.1|319803_320844_-|helix-turn-helix-domain-containing-protein	gnl|CDD|181818	PRK09393, ftrA, transcriptional activator FtrA; Provisional.	4.13746e-110
NZ_CP042266.1|WP_146478644.1|335223_336132_-|SAM-dependent-methyltransferase	gnl|CDD|252734	pfam04672, Methyltransf_19, S-adenosyl methyltransferase. This family contains a SAM (S-adenosyl methyltransferase) domain, with a central beta sheet with 3 alpha-helices on both sides. Crystal packing analysis of the structure Structure 3giw suggests that a monomer is the solution state oligomeric form. An unidentified ligand (UNL, cyan) was found at the putative active site surrounded by the residues His57, His170, Phe171, Tyr216 and Met22. The UNL is likely to be a phenylalanine or phenylalanine-like molecule. (details derived from TOPSAN).	1.95449e-52
NZ_CP042266.1|WP_146478643.1|334816_335227_-|NUDIX-domain-containing-protein	gnl|CDD|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	2.82709e-22
NZ_CP042266.1|WP_146478636.1|325324_325894_-|phosphotransferase	gnl|CDD|270704	cd05155, APH_ChoK_like_1, Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase and Choline kinase. This subfamily is composed of uncharacterized bacterial proteins with similarity to APH and ChoK. Other APH/ChoK-like proteins include ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). These proteins catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	1.97806e-39
NZ_CP042266.1|WP_146478633.1|321580_322627_+|DUF4440-domain-containing-protein	gnl|CDD|188314	TIGR03401, Uncharacterized_protein_YFL061W/YNL335W, HD domain protein, cyanamide hydratase family. Members of this protein family are known, so far, in the Ascomycota, a branch of the Fungi, and contain an HD domain (pfam01966), found typically in various metal-dependent phosphohydrolases. The only characterized member of this family, from the soil fungus Myrothecium verrucaria, is cyanamide hydratase (EC 4.2.1.69), a zinc-containing homohexamer that adds water to the fertilizer cyanamide (NCNH2), a nitrile compound, to produce urea (NH2-CO-NH2). Homologs are likely to be nitrile hydratases.	7.35741e-11
NZ_CP042266.1|WP_146478638.1|329145_330855_-|WD40-repeat-domain-containing-protein	gnl|CDD|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	5.19993e-44

Protein sequences

>NZ_CP042266.1|WP_146478636.1|325324_325894_-|phosphotransferase
MTHTQMMITADLVRDLLRDQHPDLADRPIALGARGWDNQLWRLGDDLAVRLPWATESADELLRKERAWLPALAPRLPLPVPVPQRIGEPSERFPRPWTVTTWVQGEPADRAPVTRGANAADRLAAFLTALHRPAPDAATLRRARGWAVMRALSGILIGDAGVHGRPGGKATWGPPAQTALRRLLATAGR
>NZ_CP042266.1|WP_146478635.1|323706_325221_+|MFS-transporter
MNEQRVSQPPGLRAWLGLLATLGPVLLVAMDGSVLFLAMPRVTDALSPSADQALWIMDIYGFAVGSLLVAFGNIGDRYGRLKLLMIGVAGFGVASAGAAFAPNPELLIAFRALMGVSGATLLPSALAVLSELFTDPLRRARAIGVFAATFAAGFAIGPFVGGQLLSRFWWGSVFLINLPVVLLFLLLAPILLREVRATRPGRVDTLSVLLSAAGLLLTIYAIKHTATEGPAAGTLAVGIVGVVALGRFVRRQGRLEHPLIDFVLFRDRVFTVAIITGLLPLAAWSAVAYLASGYLQSVLALPVLHTALLTLPGAAVLTATCVLAPALVGRTGKRSALLSCHFCIAAGLLLLLPAGVSGGTGWYIASTVVAGIGYGISFSVVADTAVAAVPTERAGSAAALAETSNEIGNALGIALLGSLATLLFRLQGPDLAGTLDETLRIPGLAPAVISDAKAAFVTGLHVVAVIAAVLHAALGFLTLRWIPKPRRGTGPHAVAAEEERGGVR
>NZ_CP042266.1|WP_146478634.1|322751_323603_-|helix-turn-helix-domain-containing-protein
MEPESLGAYLRTRRDRVTPADVGLRTYGTARRVSGLRREELAQLAGVSVGYYIRLEQGQAGTASQQVLDSLARVLRLDPTETAHLHNLARRPVTSRLVRPPAEHPHARVLALLDSLGESTPTVLLGRRGDVLAWNRTGHALVAEHVDFDAPRDPARRPSMPRMFFLDPLNRDLHRNWAELARIHVAYLRLTAGRHPTDALLAELVGELAMRSRDFAALWAAGDVADCTVGTMRLRHPTVGGVSVDYQVWLQPDSPDHRLEVYTPNDSASADALRLLSGQVTGR
>NZ_CP042266.1|WP_146478633.1|321580_322627_+|DUF4440-domain-containing-protein
MTNDALLPVFERLGLPDTGLSQEAYAYAERATPDFVFFHSVRSYVFARAHARHEGLRAGTDYDDELLFLSCVLHDIGLSEEGNGDQRFEVDGADTAAAFLRERGVEERRIVIAWDAIALHTSDGIAGRKGPEVRLAQAGIGTDILGIRRESLPAGLADEVHALLPRMDLAYALSDAIVAQADSKPQKASPMTFPGALLRHHLPHGAQPTWYDLIAVAGWGDRPVGAVARRRARTPEQVGAMFMEYLEAGDVEGLVSLYEPYAHFVPTSGTHLVGTGAIRKALQQLIDSGVRLKLELREIRQVDNLALVSNTATLTGVDPEPVISTTTEVLRRGPDGGWVHVVDDRFFG
>NZ_CP042266.1|WP_146478632.1|321078_321375_+|heme-binding-protein
MTIKLDAAQTAIERARAHAVAIGVPMSIAVVDGGGHLVAFARMDGAILGSIEIAPAKAKTSVLFNGPSESLWEFCKPGGPAPTTEYTRVQETAWTRTV
>NZ_CP042266.1|WP_146478631.1|319803_320844_-|helix-turn-helix-domain-containing-protein
MGVHTSGGSHHVVVVVLENVLALDIGIPLQVFGSWQDGPYSMAVCTERPGLVPMHGGPALSVADGLDALQSADTVIVPGYLEPDPPSAAVTAALAQAAARDTRMVSICSGAFALAAAGLLDGRRATTHWRYAAALARQYPQVTVQPQELYIDEGQVLTSGGVAAGLDLSLHLIRRDYGARLANQRARLLVTAPHRTGGQAQFADPPVSPDISGATMPVCEWALRHLHQPLTVDQLAREAGVSRRTLIRRFHSDTGRPPMRWLLDARLGLARELLESSDLTVEAVARRCGLGTPANFRTLFKAHVGVPPRTYRETFNSAAGRSRRPADPGRPPVVTTPLRAMRPDGP
>NZ_CP042266.1|WP_146478630.1|318573_319656_+|enoyl-CoA-hydratase/isomerase-family-protein
MAHDEVAPAPVLLRTEGRAAYLTLNRPRAINALTHGMVRDLAAALDRFEDDPSVAVIVLTGAGERGLCAGGDIRAIHADAVAGGRDSFAFWRDEYRLNARIARLRTPYVAVMDGIVMGGGVGVSAHGSVRIVTERSLVGMPETGIGFVPDVGGTHLLARAPGETGTHLALTGLPVGAADAILCGLADHCLPSDELAAFTAELAEADVQDAVRRYARPAPEGELAARREWIDTCYAAGSVEEIVHHLLTHGAREAKEAAETILTRSPTSLKVTLASLRRARALGSLEPVLEQEYRVSCATFRSPDLVEGIRAQVIDKDRRPRWSPARLEDVAEGAVAGFFGVGGGGGLGLLGPGGEYGSSG
>NZ_CP042266.1|WP_146478629.1|317187_318378_-|acyl-CoA-dehydrogenase
MHLDHTPEQQQLRDELRTYFRTLVPRGARARFADPAEQKRYYRQTIRRLGADGWLGVGWPEEYGGRGLSAFAQFIFFDEAAQAGVPLPLMALNTVGPTLMRYGTDEQKTYFLPRILSGEIDFAIGYSEPDAGTDLAALKTRAVREGDEETGTYTVNGRKIWTTNGDTADWVWLAVRTDPQAPPHRGITMLLVPTTDPGYSCTPITTLASHDTSASFYEDVRVPASRRVGPENGGWRLITNQLNHERVTLAAHGVMAIRALHDVQRWAAATKLTDGRRVIDLGWVRGRLARTHIKLDALKILNWRMVGAVEDGSLTPQDASAVKVYGSEARRDAYAWLMEVVAAAGPLKDGSAGAVLQGDLERGYRAAVIFTFGGGNNEIQREIISWLGLGMPRVRR
>NZ_CP042266.1|WP_146478628.1|316153_316870_+|ATP-binding-cassette-domain-containing-protein
MTGPEQVPQVSLRGVSAGYARTVVLSQLDLDIPPLTVTAVMGPNGSGKSTLLGLLAGVIPATSGTVVHRTGVRPAFVVQRSAVTDALPLTAREAVAMGRWGRLGPFRRPSSEDRRAVESSMERLDVADLAERQLGELSGGQRQRVLVAQGLAQGADLLLLDEPAGALDNSARETITRILDEVAAEGVTVVQATHDITAARRAGHCLLLDGGRVVAAGPPPEILEGTERERLPQPFARR
>NZ_CP042266.1|WP_146478627.1|315215_316103_-|metal-ABC-transporter-permease
MEWLMGPFEVTFVQRALWGGVLVSLICALAGTWVVLRGMAFLGDAMSHGMLPGIALASLLGANPLAGAAVSAVVMAMGVTMVGRSPRLSQDTSIGLLFVGMLSMGVIIVSRSQSFAVDLTGFLFGDVLAVRQGDLVLLGAALALALAVSVLGYRPFAALAFDERKAHTLGLHPKAAHAALLGLLTLAIVASFHIVGTLLVFGLLIAPPATVLPWARRIPVIMIGAAVLGSAAVFLGLLVSWHAGTAAGATISAIAVLQFLLSHLAAGYVNSRPRPSRPVFTLIARQRPRTDKVPS
>NZ_CP042266.1|WP_146478637.1|326323_328867_-|phosphoenolpyruvate-synthase
MPFVVDLHAVHATMTALVGGKAANLGEMLRAGLPVPPGFAVTTDAYRTVSATRELPALAPEAARRALLDAPVPPEVYDAIVTAYRGLGDDVPVAVRSSATAEDLPSASFAGQQDTLLNVVGADAVVDAVRRCWASLWTDRAVAYRDTNGIAQDSVYLAVVVQTMVRSAVSGVLFTANPVTGNRRQTVLDAAPGLGEAVVSGAVNPDHFVVEGDAIVERRPGDKRVAVRSLPGGGTEQITVRAAEEPCLTDDQIHRLTALGAAVRNHFGSPQDIEWAIDTEGTLHLTQSRPITTLFPLPDRDGFHVYFCFSLAQGLERPITPAGRAAFREIARSANEIVIGDPKSTGYTEAGERIFFDLTNLLRDKTGRTLALRLLGLMEARSAEILTELCAREPRLTPVRSPVLPAVRHGLSLARRYHAPATAVRALVRPAAAVRAAQGREPEIVARARAATTVQDALRDLIVPVLPTAAPAALTGYLMLALTGRIVRTEPGELQTVLRGLPNNVTTEMDLALGDLADEIRADPAAARAFRDPRQGPTELARAYRNGELSPAAQRGLAEFLDRWGHRAVAEIDIGVPRWSEDPSQVIAVISNLLRTDDPAARPAAVFARARADAEAAIEHLARRAGARGRLVRFALRRTRLLAGLREYPKYLGVRVLAVVRERISERGAQLYEQGRIDAPADVFFLDFEEMDTERGDLRQRITERKDSYARELRRRPVPRILLSDGTAPEPHRAPAAPGALTGTPASAGTATAPARVVTDPAGARLEPGEILVAPSTDPGWTPLFLTAGGLVMEMGGANSHGAVVAREYGIPAVVGVRGALEAVTTGDVVTVDGSTGVVTVAPGPEE
>NZ_CP042266.1|WP_146478638.1|329145_330855_-|WD40-repeat-domain-containing-protein
MTADASAGSGGSAETGSAGAGAPWTDPERLVNGDPEEVWGLLHSAGEQQAPAARVYRASAHLHRDAGPAVRRQLLALDAARYGDRELAARITAVPVPDAAAPAWGVQWATGTGLDSRYRHTMTGRHTTRSGDRLHAVASAVMMVPAVVVSCGSDRAVRIWDLTTGHQTGEPLTGHTGAVNAVATTVARGWPVAVTGSADTTVRMWDLTTGRQVGESLTGHTGAVNAVATTVIGNRPVAVTGSDDTTVRVWDLTTGQQIGQPLTGHTGPIAAVATVVLDGHAIAVTSGYGGRSEGDDAGHDGALRVWDATTGEQVGEPVPLPDDCGGAVAVALVDGYLVAVAAGGEDGSVRVWNLGADEPVAELMAGHSGAVTALTIGHAGSRPVVVTGGEDGTVRVVDLATRMPVGVPVVGRTGPVETVDTAELDGRLLIVTGGADGAMEVWDVTEAPPVGEPLEGHAHEVNTVTPALLDGRPLYQPLTGHPGGDDGGAGNDGDDGDDGGGAVATGMVNDRPVVATASGNEVRIRNPATGEPIGSELVFPAMVSAVAITPDGRLRVEFGCDTALFAPCR
>NZ_CP042266.1|WP_146478639.1|331047_331776_-|hypothetical-protein
MNRHTITRGIGALAAAFGLTLGTSGQASAATQFLWTYRSGSLCVSGYSEISAGVGGGGFSKSATYTYQRDNSVNCSIMPNKPAGWISLESHLLAFNMPKGIWYVCGDKMGPYRNGVPAFSIGLSRNTHRACGGDVWYATHTAAYAWGGVSWLGGWVASGNHWVPWAGRAGAAPQKEPRISAAEAVKRGEVRIGGPDGPRATAAQLQPKPIGGPGTKTTAAPGVGITVHQLSHRTLSGSRPSG
>NZ_CP042266.1|WP_146478640.1|332028_333024_+|helix-turn-helix-domain-containing-protein
MRTFSSEDVLPAERFEWWAQFMSRESVAAHYATDHLGDFPAEFGVLDLGSARLVRMAHPAFRARRPLRLIRQSDREMFHLIVAGERPLRMSQRRTESGVFNRSLLLFDTSYAGEMEVTGEQVRSLSIQLPKAALSLPADKVSGLVARPLSYDAGMSTVLVRFLTTLADESVGLTPPETAALERVVVDLVSATVAQHLDVYADLPVETRRQALLARIDAFVDANLRDPQLTPAVIASHHHVSLRTLHELFRERRRTVAATIRHRRLERCREALADPRHERVPVHVVGARYGFTSAASFSRAFRSAYGITAVEFRQRSRETGTPTGPVRAGRV
>NZ_CP042266.1|WP_146478641.1|333318_333663_+|hypothetical-protein
MDDISDEGPEPAPEWRDAQNNLCGSVRVRDAAVVAKRFVRAGWRSRSSSSHGYEVETSWCMVELDPLGKGGVLMNGVIDPGRLDLLATLLTRLGMSFTLELYDENDRLLREVSA
>NZ_CP042266.1|WP_146478642.1|333741_334284_-|AAA-family-ATPase
MRRYVLTGTPGSGKTSILRRLGGLGHQVVEEAATEVIARAQARGEDEPWARASFIDEIVALQRRRRMETVTTQSLQVFDRSPVCTHALATYLGLPVTPALAEELERITSSGIYERQVLFVRNLGFCEPTAARRISFEESLVFEKVHEESYRAFGYRLIDIPAGELSHRVALVNLVIFRSA
>NZ_CP042266.1|WP_146478643.1|334816_335227_-|NUDIX-domain-containing-protein
MSSSPHHDPPPVAIAVITRAVDARVLLVRRRIPEGRIVWQFPGGKVEPGETPEETAVRETREEVGLTVTGRTRIGARVHPLTGRHLVYIACTILSGTASVAAPREIIRTVWIPPRLLDTYAPDVHEPVRHYLGLNS
>NZ_CP042266.1|WP_146478644.1|335223_336132_-|SAM-dependent-methyltransferase
MRPSAVRGSASPVAAGRSHRHPAHGLRRRRPGDRGCPVTSYPESSFRPVSSARVHHAALGDPEVRDAYEADEVVVRRLLAAGVPVREMARANRAFYLRAVTCAVRELGIAQVLDIGPGLPPYSTRDTHSIADEHHHFRSRVLYADADPVVVAHWRMWADGARHRAEVLDLCDPDMILAEARAHFDLRRPVAVVLTAVLQDIADDDHPHACVRRIMDALPSRSALIVSHLTHEQDPQLVHRAVAVSREAGLPLHPRGFEEIARFFDGLTPIGPGLLPLSLWHPTHADDQAQPMVHAYGGVGLT
>NZ_CP042266.1|WP_146478645.1|336017_336668_-|hypothetical-protein
MSNADSLSWFRGRVVPWVTPWSGAPALREPVVIAPNGRRGIGYADEGVHDRTYDGVLLARGRGRRPGQGDGRPLYEQLDPRRQRRATDQLLCQVCGRRPPRSPHGNLWLMATAGELEGSLTTTPPVCPEPCAVLAVEQCPALARGYVAAWVRYPRPWGYQGVLHAPDPADPRTVRRNGESVHLPYGDPRLPWLLADLTVTRLTGCAAVDPATGGAR
>NZ_CP042266.1|WP_146478646.1|336660_336876_-|hypothetical-protein
MTMESLLVPPPLPLTAVCRVCARVTTAPVEVGYIERASGPGLVQYVCPEHATALTPGPVPDELSRGGGAHE

Crispr_ID: NZ_CP042266_2

• CRISPR_ID: NZ_CP042266_2
• CRISPR_location: 810931-811080
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP042266_2

Consensus_repeat	Method
GGCCATCCCCTCGTCCGCGGGGAGCACAC	CRISPRCasFinder
GGCCATCCCCTCGTCCGCGGGGAGCACAC	PILER-CR

spacers of NZ_CP042266_2

>2.1|810960|32|NZ_CP042266|CRISPRCasFinder
CCTTCGGATCCAGCGGTCGTTCGATGCTCAGG
>2.2|811021|31|NZ_CP042266|CRISPRCasFinder
GGGCGGGCCCGGGCTCGCGGGGGTCCCGTTC
>2.3|810966|32|NZ_CP042266|PILER-CR
CCTTCGGATCCAGCGGTCGTTCGATGCTCAGG
>2.4|811027|31|NZ_CP042266|PILER-CR
GGGCGGGCCCGGGCTCGCGGGGGTCCCGTTC

CRISPR arrays and Neighbor proteins around NZ_CP042266_2

CRISPR arrays

The CRISPR arrays of NZ_CP042266_2

>merge|NZ_CP042266|2|810931-811080|CRISPRCasFinder,PILER-CR
ACGCGGCCCCGCGTCCGCGGGGAGCACGACCTTCGGATCCAGCGGTCGTTCGATGCTCAGGGGCCATCCCCTCGTCCGCGGGGAGCACACGGGCGGGCCCGGGCTCGCGGGGGTCCCGTTCGGCCATCCCCTCGTCCGCGGGGAGCACAC

>NZ_CP042266|2|2|810931-811080|CRISPRCasFinder
ACGCGGCCCCGCGTCCGCGGGGAGCACGA	CCTTCGGATCCAGCGGTCGTTCGATGCTCAGG
GGCCATCCCCTCGTCCGCGGGGAGCACAC	GGGCGGGCCCGGGCTCGCGGGGGTCCCGTTC
GGCCATCCCCTCGTCCGCGGGGAGCACAC

>NZ_CP042266|2|2|810937-811080|PILER-CR
CCCCGCGTCCGCGGGGAGCACGACCTTCG	GATCCAGCGGTCGTTCGATGCTCAGGGGCCAT
CCCCTCGTCCGCGGGGAGCACACGGGCGG	GCCCGGGCTCGCGGGGGTCCCGTTCGGCCAT
CCCCTCGTCCGCGGGGAGCACAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146478968.1|797873_799475_-|RICIN-domain-containing-protein	unknown	unknown	gnl|CDD|379501
NZ_CP042266.1|WP_146478971.1|805354_805969_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146478970.1|805019_805319_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146478977.1|811370_812858_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP042266.1|WP_146478973.1|806507_807599_+|SidA/IucD/PvdA-family-monooxygenase	unknown	unknown	gnl|CDD|224983
NZ_CP042266.1|WP_146478978.1|817051_817306_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146478975.1|808555_810364_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224055
NZ_CP042266.1|WP_146484027.1|802920_803403_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146478969.1|800992_801718_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146478967.1|796815_797334_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146478981.1|821273_822158_+|acyl-CoA-thioesterase-II	unknown	unknown	gnl|CDD|224857
NZ_CP042266.1|WP_146478983.1|822739_823972_-|acyl-CoA-dehydrogenase	unknown	unknown	gnl|CDD|173847
NZ_CP042266.1|WP_146484029.1|814955_816737_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224055
NZ_CP042266.1|WP_146484028.1|813040_814873_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224055
NZ_CP042266.1|WP_146478984.1|824139_824802_+|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP042266.1|WP_146478979.1|817552_818344_-|metal-dependent-hydrolase	unknown	unknown	gnl|CDD|377294
NZ_CP042266.1|WP_146478972.1|806011_806434_-|YjbQ-family-protein	unknown	unknown	gnl|CDD|223509
NZ_CP042266.1|WP_146478982.1|822198_822690_+|glutathione-peroxidase	unknown	unknown	gnl|CDD|238207
NZ_CP042266.1|WP_146478974.1|807618_808458_-|endolytic-transglycosylase-MltG	unknown	unknown	gnl|CDD|381750
NZ_CP042266.1|WP_146478980.1|818708_821222_+|DUF3516-domain-containing-protein	unknown	unknown	gnl|CDD|378795

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146478968.1|797873_799475_-|RICIN-domain-containing-protein	gnl|CDD|379501	pfam14200, RicinB_lectin_2, Ricin-type beta-trefoil lectin domain-like.	0.00111814
NZ_CP042266.1|WP_146484028.1|813040_814873_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.41512e-67
NZ_CP042266.1|WP_146478977.1|811370_812858_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.38596e-19
NZ_CP042266.1|WP_146478973.1|806507_807599_+|SidA/IucD/PvdA-family-monooxygenase	gnl|CDD|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	1.44161e-36
NZ_CP042266.1|WP_146478975.1|808555_810364_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	9.05425e-169
NZ_CP042266.1|WP_146478981.1|821273_822158_+|acyl-CoA-thioesterase-II	gnl|CDD|224857	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism].	2.12015e-115
NZ_CP042266.1|WP_146478983.1|822739_823972_-|acyl-CoA-dehydrogenase	gnl|CDD|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	2.03283e-124
NZ_CP042266.1|WP_146484029.1|814955_816737_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.0501e-117
NZ_CP042266.1|WP_146478984.1|824139_824802_+|TetR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.35373e-11
NZ_CP042266.1|WP_146478979.1|817552_818344_-|metal-dependent-hydrolase	gnl|CDD|377294	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase. YdjM is a family of putative LexA-binding proteins. Members are predicted to be membrane-bound metal-dependent hydrolases that may be acting as phospholipases. It is a member of the SOS network, that rescues cells from UV and other DNA-damage. Expression of YdjM is regulated by LexA.	7.53087e-05
NZ_CP042266.1|WP_146478972.1|806011_806434_-|YjbQ-family-protein	gnl|CDD|223509	COG0432, COG0432, Uncharacterized conserved protein [Function unknown].	7.17861e-33
NZ_CP042266.1|WP_146478982.1|822198_822690_+|glutathione-peroxidase	gnl|CDD|238207	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.	8.7877e-88
NZ_CP042266.1|WP_146478974.1|807618_808458_-|endolytic-transglycosylase-MltG	gnl|CDD|381750	cd08010, MltG_like, proteins similar to Escherichia coli YceG/mltG may function as endolytic murein transglycosylases. The gene product of Escherichia coli yceG/mltG has been erroneously annotated as an aminodeoxychorismate lyase. Its overexpression has been reported to cause abnormal biofilm architecture, and it has been reported to be part of a putative five-gene operon. More recently it has been proposed to function as a terminase for peptidoglycan polymerization. The family also includes Streptomyces caeruleus NovB, an uncharacterized member of the novobiocin biosynthetic gene cluster.	2.44165e-84
NZ_CP042266.1|WP_146478980.1|818708_821222_+|DUF3516-domain-containing-protein	gnl|CDD|378795	pfam12029, DUF3516, Domain of unknown function (DUF3516). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is typically between 460 to 473 amino acids in length. This domain is found associated with pfam00270, pfam00271.	0

Protein sequences

>NZ_CP042266.1|WP_146478975.1|808555_810364_-|ATP-binding-cassette-domain-containing-protein
MRHEPSTWTPPDRTPDQPPAQVRRILRLFRPYHGRLALVGLLVGASALVSVATPFLLKAVLDTAIPQGRTGLLGLLALGMILAAVLNSVFGVLQTLISTTVGQRVMHDLRTAVYARLQQMPLAFFTRTRTGEVQSRIANDIGGMQATVTSTATSLVSNLTAVVATVVAMLALDWRLTVVSLLLLPVFVWISRRVGRERKKITTHRQKQMASMAATVTESLSVSGILLGRTMGRADSLTRSFERESEQLVDLEVRSSMAGRWRMSVIGIVMAAMPAVIYWAAGLALTHGGAAISIGTLVAFVSLQQGLFRPAVSLLSTGVDMQTSLALFQRIFEYLDLPVDITEPERPVRLEKTRGEVRFEGVHFGYEAGQPPTLDGIDITVPPGRSLAVVGPTGSGKSTLSYLVPRLYDVTGGRVTLDGVDVRDLDFDSLARSVGVVSQETYLFHASVADNLRFAKPDATDAEIETAARAAQIHEHIAGLPEGYDTMVGERGYRFSGGEKQRLALARTILRDPPVLILDEATSALDTRTEHAVQQAIDALSAGRTTITIAHRLSTVRDADEIVVLDGGRIAERGTHDELLAREGRYARLIHGDTREAVPAVP
>NZ_CP042266.1|WP_146478974.1|807618_808458_-|endolytic-transglycosylase-MltG
MMNAPMSRPAGRRPRPIRRGRAALVAAAGLVLATAVLFPLLTDIERVGSRTLLIPEGRRAAQVYEAVDRVLGERPGTTRRAVGTAGLNLPAAARGNPEGYLFPATYPVGPDSTPASLLARMVDTANQRFAADKVAAGARRVGTTVYETVAIASIVQAEAATAEDMGKVSRVIHNRLARGMPLQMDSTLNYALRRTTVDTSLADTRINSPYNSYVRKGLPPTPIDNPGDQALDAALAPTPGKWLFFVTVAPGDTRFSTTFAEHQRHVADFNAHRADERAR
>NZ_CP042266.1|WP_146478973.1|806507_807599_+|SidA/IucD/PvdA-family-monooxygenase
MNDFEARNVDVVVVGAGQAGLSGAYHLRRIGLVPDRDVVVLDHSPAPGGAWQFRWPSLTYGKVHGMHALPGLELTGADPARPSSQVIGDYFREYEERFGLGVRRPVDVTAVREGQDGRLLVESSAGNWSARALINATGTWDRPFWPRYPGQGTFRGRQLHTAGYPGPAEFAGQRVVVVGGGASGTQHLMELAEHAAATTWVTRRPPVFREGPFDENVGRAVVARVAERVRDGLPPQSVVSVTGLPLTDAIRAARASGVLDRLPMFDRITPTGVAWDDGRTVEADVIVWATGFRAALDHLAPLKLREPGGGIRMEGTRAARDERVHLIGYGPSASTVGANRAGRAAVAEIRRLLEREPALTPSG
>NZ_CP042266.1|WP_146478972.1|806011_806434_-|YjbQ-family-protein
MPAPFSTTTLDITTGSRETVTDLTRACERFLDDVADGRDGLLNVFVPHATAGIAVIETGSGSDDDLLTALRTLLPADDRWQHRHGTPGHGRDHVLPALVPPHATLPVLGGRLELGTWQSVCLVDTNISNANRQVRLSFLG
>NZ_CP042266.1|WP_146478971.1|805354_805969_-|hypothetical-protein
MELRALQRRKRDTTVKTRVAGRPKGKPSYGFPYVRVVTGGKIDRIALHPHASVGHLAVMYGERAGGNPRQPTSPKNILLSEAALGCLMHRRRPVIDQDGNPVRLCEGPWDRSTHEALKHCPEVRDTPFKGRRSGREYLLTEVALCGLCGNRLYTQSSADVPPRYVCTARNKGWLSPALPTRTPVLGGASPAGGQPLSFLVPQAG
>NZ_CP042266.1|WP_146478970.1|805019_805319_+|hypothetical-protein
MASLALGLSALGGNTLLNSAVSDPPAGGGADCGASGAFAVTSKASTTGGDPDGSTGGTASGVPASCGTANGNGGNGGSPTDLHGTTGEPGCVVITYSTT
>NZ_CP042266.1|WP_146484027.1|802920_803403_-|hypothetical-protein
MDGGPGTASITVRGSDGGLGENLQAGNAGTITASDTGGKVTVRGGDSTALGRGAPGNIGSIRAGSGPSTITVTGGDTTAGPRSGGDGNATASFPDEAVGTIAGGPSNDTIILNGGRPQSSLPLIGNSGNSGDVDGGGGTNTCTITPAKTFFSTVDNCTIT
>NZ_CP042266.1|WP_146478969.1|800992_801718_+|hypothetical-protein
MVEPTLRVAVGGGGTGGTAGPGGSGETAAGLLLDNPATPGTGGGDGGDGGTSRLIATTVLSGRTETDLARASGGTGGGGTRGGQEGLDGIPTYLEPGGEGRAGAGGAGGGAGSAAADTFCQTRDRTVTFGTSGTDGTSGGPGAQGAQPAGGAGGSPGSGGGGGASPAVTQVTLPDGTVFPVPVGVRSGGGTGGNGGTGGRGGDGSYKTGQGGGVVRAQNGNPGGRGFYGGDGSQGLVVIAW
>NZ_CP042266.1|WP_146478968.1|797873_799475_-|RICIN-domain-containing-protein
MSGSVPPVGDGTDGPSTTRDERVARLRGLLSSGARADTRWARRLRVNRSSNILIETALHAAARLSEGLPLSDLEQQLVDQMAEIVTVEEVGEYGKLYKDAASGVAEFFPAGVARLPLERSYSLADYAADQEVLVRDILAQPNVNIIDVASLPQGVPADGPDGPASPESEEFVAAMGEYGSALTVVTAPALDAVVLAPSTFTLKGHKFLLVRESDEVGSEEYYWATGAGSDEAAHREYRSPVFKDLDAGEYRGFGDGGILFQGRVDRFCFLDIEAWEEDSGGIWEQISKYLYKVSNGAMEAAERGQASGNPDDNAQAAAGALALFGVVTEFVGWLFSLFENKDDFVLHRAFGFTRAALVALSKVPGGVGWPAGLASYEFNGGREGHLRLWIHTAYQRASEPGPRHYALSMSNAGRVYGQPYAGNADQSFQRVPQADGSTGIRNPRHNLALSMNSAGVVTGRPYAGDADQSFKLVPQADGSTGIRNPYHNLALSVSGTGVLTGRTYTGGTDQSFEIVPQDGDDSTGIRSTYHAAP
>NZ_CP042266.1|WP_146478967.1|796815_797334_+|hypothetical-protein
MDFSDCKEGTKYLLGRTFPPSLELGPDDGSWASRWHYRYHEDGLERQQMRAYLAAADKGGITKPVNSVGSRTQMYGCGAVRYNGSTYRWDYDGTYITASDSKTVPSERTYWTDDDGRLVGKTKGGIGQKWTIAPYMVSAKSPDKDGADIAGVAANVFLTGLFGPITSIFRRA
>NZ_CP042266.1|WP_146478977.1|811370_812858_+|Gfo/Idh/MocA-family-oxidoreductase
MNDAATPDHNAGISGSDNDVAAGSQPPADGPTRRSVLRTSAGVAGAGVAVGAFGAPAAEAAPAAPAAAVAGTGEHAAPPRQGRTMAGVPFERRGTVRLGIIGLGNRGGSMIDLFLALPGVRVVALCDPVKAKCERAAAKVVAAGQPSPAVYAKGEDDYRELCERGDLDLVYVATPWETHFTIAKAALLGGKHVGVECPVAMRLDELWALVDLSERTRRHCMQLENCCYGRNEMRVLRMAHAGLFGELLHGAGAYNHDLRALMFDPDYYEGPWRRLWHTRLRGDLYPNHGFGPVANYMDVNRGDRVVSISSFGTPALGLAEYREANMEPGHPSFKESYVSADRTVSMVRTAKGRIIRLEHDVSTPHPYSRINSLGGTKGVFEDYPARIYVEPDHTDHRWGDFARYADWDHWLWKEHANPPGGHGGMDYIMLLRLVQTMRLGLVPDFDVYDAAVWTAPVPLSHLSIKAQGAPLPIPDFTRGEWRRTRPGVDSAKPTD
>NZ_CP042266.1|WP_146484028.1|813040_814873_+|ATP-binding-cassette-domain-containing-protein
MQIHNLPYRDPGKPDVRSGARFLVWLFRHQLGGQAKALGWGLLNQLAIAGLAVGTGIAVQAVVDRDGRGLALAGLLIAGLGIAIALGDAMVHRATVTNWITAAARVQQLLARKTAELGSVLTRRVAAGEVITVSTSDAEKIGWFVEVVSRFVAAATTVLIVCTALVIYQPALGVVVAIGFPVVALAVLPLLPHASHRADVQREKAGYATELAADTVAGLRVLRGIGGEELFLNRYRAASQEVRGAAVRSARTWSLISAVQVLLPGALMLTVVAYGAKLALDGRITVGELVTVYSAVLLAQHPMRAVEEMALAYSYSQPSAKRAARVLALERSVTATDGDHSRPTGDLYDPVTGLLAPEGLLTAVVCGDPDVAGTLAERLGGHPAGDVVAAPDGDEREPDRAPGGPAAVPSVRLGEVPLDELPLDEARTAVLVQDKEPVLLSGTLRELLDVPSSGRVSASDALGAAQCSDVLDALARASTGTDGTGDPMETPITERGRSLSGGQRQRLALARSLVTDPEVLVLDEPTSAVDSHTEARIAAGIRQLRDARTTVVLASSPLLLDLADRVVLMDGDTVAAVGTHRELLRSEPRYRAVVAREPESGTERTAGVPV
>NZ_CP042266.1|WP_146484029.1|814955_816737_+|ATP-binding-cassette-domain-containing-protein
MFRVTPPDYDPAAPESVTTLPVGGAATVRAYAGELIRRHRRAFTVLITVQALAVLASMVGPYLLGSVVQRLEGGARELPLGRTIALFAVALVLQTVFVRLVALRGVTLGEEMLADLREDFLVRSVRLPPGVLERAGTGDLLSRITTDIDRLANAMREAVPQLAIGVVWAGLLIAGLAVTAPPLALSVLVAAPLLIVACRWYFRRAPSAYRSEAAGSAGVATALAETVDAGRTVESHRLGQRRVELSDRRVKEWAAWERYTLYLRSVLFPVVNTAHTVVLVSVLMIGGVFVLKGWLDIGQLTTGALLAQMLVEPVGIVLRWYDELQVAQVSLARLVGVREIEPDAGDDELRPEGREMRADEVRFGYREGVDVLHDVSLSVPPGSRVALVGPSGAGKSTLGRLLAGIYGPRSGRVALGDAELSRMSAERVREHVALVNQEHHVFVGSLRDNLRLARNEAADGELWNALGVVDADGWARALTDGLDTEVGSGGLTLTPAQAQQIALARLVLADPHTLVLDEATSLLDPRAARELERSLSRVLEGRTVVAIAHRLHTAHDADVIAVVEAGRITELGHHDELVAAGGPYSALWRSWHG
>NZ_CP042266.1|WP_146478978.1|817051_817306_-|hypothetical-protein
MRRRRPIMALLALAASAALLIGAAGQLAKMVIPDSAPRAASADVAPILIGGFLIGAAAQLTGGGDAGAPDRVISAMNKAELVGA
>NZ_CP042266.1|WP_146478979.1|817552_818344_-|metal-dependent-hydrolase
MMGPAHSLSGAAAWLGVGAATAAAGHAMPWPVLVVGALICAGAALAPDLDHKAATISRAFGPVSRALCEIVDKLSFAVYKATRKPGDKRRTGGHRTLTHTWVWAVLIGGGASALAVTGGRWAVLAILFVHLVLAVEGLLWRAARVSSDVLVWLLGATSAWILAGVLDKPGNGSDWLFTAPGQEYLWLGLPIVLGALVHDIGDSLTVSGCPILWPIPIGNRRWYPIGPPKALRFRAGSWVELKVLMPVFMLLGGVGGASALNVF
>NZ_CP042266.1|WP_146478980.1|818708_821222_+|DUF3516-domain-containing-protein
MTLIDQLPPDADPDALFEAFSSWAEGQGLSLYPAQEEALIEVVSGANVILSTPTGSGKSMVAAGAHFTALARDEVTFYTAPIKALVSEKFFDLCKLFGTENVGMLTGDASVNADAPVICCTAEVLASIALRDGKAADIGQVVMDEFHFYAEPDRGWAWQIPLLELPQAQFVLMSATLGDVSRFEQDLTRRTGRPTAVVRSATRPVPLSYEYRRTPITETLTELLQTRQAPVYIVHFTQAAAVERAQSLMSINMCSREEKEQIAELIGNFRFTTKFGRNLSRYVRHGIGVHHAGMLPKYRRLVEKLAQAGLLKVICGTDTLGVGVNVPIRTVLFTALTKYDGTRVRTLRAREFHQIAGRAGRAGFDTAGLVAAQAPEHVIENEKALTKAGDDPKKRRKVVRKKAPEGFVAWSDSTFEKLIESEPEPLTSRFNVTHTMLLSVIARPGNAFDAMRHLLEDNHEPRRNQLRHIRRAIAIYRSLLDGGVVERLPEPDAQGRIVRLTVDLQHDFALNQPLSTFALASFELLDPESPSYALDMVSVVESTLDDPRQILAAQQNKARGEAVALMKADGVEYEERMERLQEVTYPKPLEELLWHAYNLYRTSHPWVGDHPVSPKSVIRDMYERALSFTEFTSFYELARTEGIVLRYLAGAYKALEHTIPDDLKSEDLQDLIAWLGEMVRQVDSSLLDEWEQLANPEVQTAEEAREKADQVRPVTANARAFRVLVRNAMFRRVELAALDKVRELGELDEESGWNADAWGEAMDAYWDEYDDLGTGPDARGPKLLLIEEDEPHGLWRVRQIFADPNGDHDWGISAEVDLAASDEEGRAVVRVTAVGQL
>NZ_CP042266.1|WP_146478981.1|821273_822158_+|acyl-CoA-thioesterase-II
MTNPVERLVDLLDLERIEVNIFRGLSPDESLQRVFGGQVAGQALVAAGRTTDGERPVHSLHAYFLRPGRPGVPIVYQVERVRDGRSFTTRRVTAVQEGRTIFNLTASFHLPEPGGIEHQLPPRADFPDPETLPKVADEIREHLGALPEALERMARRQPFDIRYTEKLRWTPEEIKEKESDPRSAVWMRAMGPLGDDPLVHTCALTYASDMTLLDAVRIPVEPLWGRRGYDMASLDHAMWFHRPFRADEWFLYDQESPISTGGRGLARGRIYNRAGELLVSVVQEGLFRPLDGTA
>NZ_CP042266.1|WP_146478982.1|822198_822690_+|glutathione-peroxidase
MTTLYDIPLRSLTGEETSLAAHRGSVVLVVNVASRCGLTPQYTALERLQQEYGERGFTVVGVPCNQFGGQEPGSAEEIGTFCSATYGVTFPMLEKAEVNGAGRHPLYQELTRTADAEGAAGDVQWNFEKFLIGPDGTVAGRFRPRTEPDAPELVAAIGKLLPP
>NZ_CP042266.1|WP_146478983.1|822739_823972_-|acyl-CoA-dehydrogenase
MAKFTFELNDDQKQVRDWLHGFASDVIRPAAAEWDEREETPWPVIQEAAKIGIYSLDFYAQQYFDPTGLGIPLAMEELFWGDAGIALSIVGTGLAAVGVLANGTEEQIGTWIPQMYGDPDDVKVAAFCSSEPDAGSDVGALRTRAVYDEAKDEWVLDGTKTWATNGGIAHVHVVVAVVDPDLGTRGHASFVVPPGTPGLSQGQKFRKHGIRASHTAEVVLDGVRVPGDCLLGGKEKLDERLARARERASGGSAGERVANAAMATFEASRPAVGAMAVGTARAAYEIALDYARTRTQFGRPVIDNQGIAFQLADMRTRIDAARLLVWRASWMAANGKPFEAAEGSMSKLFASETAKDVTAQAVQILGGNGFTRDYPVERMHRDAAIYTIFEGTSEIQRLVIARTLSGVPIR
>NZ_CP042266.1|WP_146478984.1|824139_824802_+|TetR-family-transcriptional-regulator
METTRQPADQDRSAQQRRRELLEAADRVVLRDGPGASMNAIAAEAGITKPILYRHFGDKGGLYRALAKRHTDALLDSLRAALDAPADRRRRIAATLDTYLAAIEARPQVYRFLMHPAESPVADPAQQPEAGFDIGRHSAPVLRRLGEELAQVIGDRVDLGPDGARRARVWGHGIVGMMHAAGDWWLGERPCSRAELVADLTDLLWGRLSSVADRDGSPGF

Crispr_ID: NZ_CP042266_3

• CRISPR_ID: NZ_CP042266_3
• CRISPR_location: 2131827-2131931
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP042266_3

Consensus_repeat	Method
TGCTCTGCCAATTGAGCTACAGGGGAT	CRISPRCasFinder

spacers of NZ_CP042266_3

>3.1|2131854|51|NZ_CP042266|CRISPRCasFinder
CGCGCTCCCCCGACTGGACTCGAACCAGTAACCTGCCGGTTAACAGCCGGC

CRISPR arrays and Neighbor proteins around NZ_CP042266_3

CRISPR arrays

The CRISPR arrays of NZ_CP042266_3

>merge|NZ_CP042266|3|2131827-2131931|CRISPRCasFinder
TGCTCTGCCAATTGAGCTACAGGGGATCGCGCTCCCCCGACTGGACTCGAACCAGTAACCTGCCGGTTAACAGCCGGCTGCTCTGCCAATTGAGCTACAGGGGAT

>NZ_CP042266|3|3|2131827-2131931|CRISPRCasFinder
TGCTCTGCCAATTGAGCTACAGGGGAT	CGCGCTCCCCCGACTGGACTCGAACCAGTAACCTGCCGGTTAACAGCCGGC
TGCTCTGCCAATTGAGCTACAGGGGAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146479924.1|2127641_2128037_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|133390
NZ_CP042266.1|WP_146484170.1|2128803_2129739_+|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|376556
NZ_CP042266.1|WP_146484172.1|2138242_2139397_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|235640
NZ_CP042266.1|WP_146479927.1|2132113_2132413_+|YtxH-domain-containing-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146479933.1|2143558_2144995_-|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl|CDD|235098
NZ_CP042266.1|WP_146479926.1|2130970_2131267_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146479929.1|2134416_2136150_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224055
NZ_CP042266.1|WP_146484171.1|2130103_2130364_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146479923.1|2126812_2127628_-|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270256
NZ_CP042266.1|WP_146484168.1|2123207_2124677_+|AMP-binding-protein	unknown	unknown	gnl|CDD|236096
NZ_CP042266.1|WP_146479931.1|2140114_2142052_-|DNA-primase	unknown	unknown	gnl|CDD|235551
NZ_CP042266.1|WP_146479928.1|2132565_2134089_+|sugar-kinase	unknown	unknown	gnl|CDD|198375
NZ_CP042266.1|WP_146479922.1|2124771_2126733_-|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|226361
NZ_CP042266.1|WP_146479932.1|2142129_2143404_-|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|170080
NZ_CP042266.1|WP_146479921.1|2121727_2122960_+|MFS-transporter	unknown	unknown	gnl|CDD|225133
NZ_CP042266.1|WP_146484169.1|2128275_2128467_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146479934.1|2145119_2145878_+|hypothetical-protein	unknown	unknown	gnl|CDD|225500
NZ_CP042266.1|WP_146479925.1|2129820_2130054_-|type-II-toxin-antitoxin-system-VapB-family-antitoxin	unknown	unknown	gnl|CDD|378324
NZ_CP042266.1|WP_146479930.1|2136146_2138087_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224055
NZ_CP042266.1|WP_146484173.1|2145957_2146539_+|TIGR03086-family-protein	unknown	unknown	gnl|CDD|274424

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146479924.1|2127641_2128037_-|helix-turn-helix-domain-containing-protein	gnl|CDD|133390	cd04762, HTH_MerR-trunc, Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins. Proteins in this family mostly have a truncated helix-turn-helix (HTH) MerR-like domain. They lack a portion of the C-terminal region, called Wing 2 and the long dimerization helix that is typically present in MerR-like proteins. These truncated domains are found in response regulator receiver (REC) domain proteins (i.e., CheY), cytosine-C5 specific DNA methylases, IS607 transposase-like proteins, and RacA, a bacterial protein that anchors chromosomes to cell poles.	2.9773e-14
NZ_CP042266.1|WP_146484170.1|2128803_2129739_+|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|376556	pfam01510, Amidase_2, N-acetylmuramoyl-L-alanine amidase. This family includes zinc amidases that have N-acetylmuramoyl-L-alanine amidase activity EC:3.5.1.28. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls (preferentially: D-lactyl-L-Ala). The structure is known for the bacteriophage T7 structure and shows that two of the conserved histidines are zinc binding.	6.05201e-17
NZ_CP042266.1|WP_146479923.1|2126812_2127628_-|molybdate-ABC-transporter-substrate-binding-protein	gnl|CDD|270256	cd13538, PBP2_ModA_like_1, Substrate binding domain of putative molybdate-binding protein;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins of putative ABC-type transporter. Molybdate transport system is comprised of a periplasmic binding protein, an integral membrane protein, and an energizer protein. These three proteins are coded by modA, modB, and modC genes, respectively. ModA proteins serve as initial receptors in the ABC transport of molybdate mostly in eubacteria and archaea. After binding molybdate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.03424e-85
NZ_CP042266.1|WP_146479933.1|2143558_2144995_-|deoxyguanosinetriphosphate-triphosphohydrolase	gnl|CDD|235098	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	0
NZ_CP042266.1|WP_146479929.1|2134416_2136150_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.42764e-158
NZ_CP042266.1|WP_146484172.1|2138242_2139397_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	2.92087e-159
NZ_CP042266.1|WP_146484168.1|2123207_2124677_+|AMP-binding-protein	gnl|CDD|236096	PRK07787, PRK07787, acyl-CoA synthetase; Validated.	0
NZ_CP042266.1|WP_146479931.1|2140114_2142052_-|DNA-primase	gnl|CDD|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP042266.1|WP_146479921.1|2121727_2122960_+|MFS-transporter	gnl|CDD|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	4.71465e-85
NZ_CP042266.1|WP_146479922.1|2124771_2126733_-|molybdate-ABC-transporter-permease-subunit	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	3.65466e-82
NZ_CP042266.1|WP_146479932.1|2142129_2143404_-|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|170080	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional.	9.96329e-73
NZ_CP042266.1|WP_146479928.1|2132565_2134089_+|sugar-kinase	gnl|CDD|198375	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases. This subgroup is composed of D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17) from bacteria and eukaryota. They share high sequence similarity with Escherichia coli xylulokinase (EcXK), which catalyzes the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. Some uncharacterized sequences are also included in this subfamily. EcXK exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	6.78999e-117
NZ_CP042266.1|WP_146479934.1|2145119_2145878_+|hypothetical-protein	gnl|CDD|225500	COG2949, SanA, Uncharacterized membrane protein [Function unknown].	1.14581e-55
NZ_CP042266.1|WP_146479925.1|2129820_2130054_-|type-II-toxin-antitoxin-system-VapB-family-antitoxin	gnl|CDD|378324	pfam09957, VapB_antitoxin, Bacterial antitoxin of type II TA system, VapB. VapB is the antitoxin of a bacterial toxin-antitoxin gene pair. The cognate toxin is VapC, pfam05016. The family contains several related antitoxins from Cyanobacteria and Actinobacterial families. Antitoxins of this class carry an N-terminal ribbon-helix-helix domain, RHH, that is highly conserved across all type II bacterial antitoxins, which dimerizes with the RHH domain of a second VapB molecule. A hinge section follows the RHH, with an additional pair of flexible alpha helices at the C-terminus. This C-terminus is the Toxin-binding region of the dimer, and so is specific to the cognate toxin, whereas the RHH domain has the specific function of lying across the RNA-binding groove of the toxin dimer and inactivating the active-site - a more general function of all antitoxins.	2.32574e-06
NZ_CP042266.1|WP_146479930.1|2136146_2138087_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP042266.1|WP_146484173.1|2145957_2146539_+|TIGR03086-family-protein	gnl|CDD|274424	TIGR03086, TIGR03086, TIGR03086 family protein. This family, like pfam07398 and TIGRFAMs family TIGR030834, belongs to the larger set of probable enzymes defined in family TIGR03083. Members are found primarily in the Actinobacteria (Mycobacterium, Streptomyces, etc.). The family is uncharacterized.	2.86145e-46

Protein sequences

>NZ_CP042266.1|WP_146479926.1|2130970_2131267_+|hypothetical-protein
MRTWYQCLACESHYLPPESMTYPSHPGVTANPVHCTTHRCRERAERIVAASGMPMSVFEAMAIRAAARAEASTPASTTRRARGGRSASGPGSARSRLG
>NZ_CP042266.1|WP_146484171.1|2130103_2130364_-|hypothetical-protein
MRAAVADGGRRVSIHVADEDSMALVTVLSHCAGAPDDDALLRSIAEVSSVRSCGTDAAPDGRRVWALFDAGPVTSQRRAAGAVPGL
>NZ_CP042266.1|WP_146479925.1|2129820_2130054_-|type-II-toxin-antitoxin-system-VapB-family-antitoxin
MSMTWIDVDDEALAEAMRLMGARTEKETVNMALRDYVVRTKRLKAAGKLAARGARGEFDAAAEAHQAAKRARRAAFE
>NZ_CP042266.1|WP_146484170.1|2128803_2129739_+|N-acetylmuramoyl-L-alanine-amidase
MTAAQFEAALRAEGVTVREVGSWQTHTRTAPGRPWGPVHGVVIHHTVTERPTDPVRLCRDGYSALPGPLCHAVITKDGTVHLIGWGRTNHAGGGDPRVLDAVVAESYGERPPAPTKGNKDGVDGNRHFYGFECENLGDGKDPWPAAQLEAIERVSAALCRVHGWSAKSVIGHLEWSNDKIDPKGFTMPDLRARVADRLTGRPTAPKPKPPKPSKPVKPAVDLSQLIAAARRDPARPGTPVSYPGVRTVEKALVKEGLLTAGLADGHYGTATKDAYAAWQRRLGYTGPAADGIPGQTSLKKLATKHGFTVTP
>NZ_CP042266.1|WP_146484169.1|2128275_2128467_-|hypothetical-protein
MALETRAWEEIREGRLTVETAGAAQAAITAHALAVGESRYEVEQALKARVRQPAEPPAPEGEG
>NZ_CP042266.1|WP_146479924.1|2127641_2128037_-|helix-turn-helix-domain-containing-protein
MQSYTIGQAARLLGVSPDTTRRWADAGRFATHRDDGGRRLVDGRDLAAFAVELGQGGDGDGEPSYTSARNAFPGIVTAVKLGDIAAQVEIQAGPHRLVSLLTREAVEELGLAVGMQATARVKSTSVHIDRP
>NZ_CP042266.1|WP_146479923.1|2126812_2127628_-|molybdate-ABC-transporter-substrate-binding-protein
MSLSPTPRTGPSRPRRAVLALTAAALLVPLAACGDSDSDSDDGDGGGTSAKAELTVLAAASLTDVFKTAGSAYEKAHPGSKVTFSFAGSQELAAQVRQGAPADALVTADTKTMDGLKGETGTPAIIAKNRLVIATEEGNPHKVGALKDLANPKLKVVLAAPEVPVGRYSAKILDAQKITVKAVSQEPNVRAVLSKVELGEADAGLVYKTDAAGATDKVDAIEIPDAQNAVAEYPAATLKTSKNADAAAAFVTWLQGPEAQKILRDAGFQQP
>NZ_CP042266.1|WP_146479922.1|2124771_2126733_-|molybdate-ABC-transporter-permease-subunit
MKSTSTGTRPARTGLRRRGGASGVPVVLALPALLAVGFLLLPLAGILARTEWADLGTHLTSPGVTEALGLSLLVSGWALGLSLLLGVPLAWLLARTDIPGKALVRTLVMLPMVLPPTVGGVALLLGFGRRGLLGPWLEETFGITLPFHTSGAVIAATFVAMPFLVISLEGALNGLRPEYEETAASLGASPLRVFCTVTVPMAAPGLIAGAALTWARALGEFGATITFAGNLPGVTQTLPLQVYLLLQEEPAAATSVSLLLLAIAMAVLIALRGRWTGGAGADRREAVARAEPADAPEPDDAPPPDPGDRWALHAEVTGFTRLVLDADPGTTVAVVGPNGAGKTTLLRALLGLTPRARAALRLGDDEVTGLPPHRRSVAWVPQNGALFPHLTALGNTAYGLRAHGVPRAEARREARRWLDRLGVGGLAHHRPAQLSGGQAQRVALARALAARPRLLLLDEPLAALDQTTRARVRHLLRRHLDAFGGVCLIVTHDPVEALSLADRVLVLDGGEALQDAPPAEVTRRPRSPWVARMLGRNAWPGTAAPDGSLTLRDGGRLVVAEPPPAGAEVLAVIAPEAVAVHRERPAGSPRNVWPGTVREITASGGRLRVLVVSARAPDLVAEITPQSAAELGLAEGVPVWTSVKATEVVTVLL
>NZ_CP042266.1|WP_146484168.1|2123207_2124677_+|AMP-binding-protein
MLPSSGRPALRFGERALTYGQLADTAGALAARIGGAPRVALWATPTLETAVGTVAALLAGVPVVPLNPKTGERELAHILGDSAPALVLAAAGDELPAALGAVERVNIQATPNPTPTPTPAATAGAPGPVPDPAAPAMIVYTSGTTGPPKGAVLPRRAIAATLDAVADAWEWTGDDVLVHGLPLFHVHGLIIGVLGPLRRGGALRHLGRFSVDGVTRELADGGTMLFGVPTMYHRLAETLAEDPALVRALTGARLLVSGSAALPLPDHTRISAATGRRIVERYGMTETLMNTSVRVDDQRSRPGSVGVPLPGVELRLVDEAGAPVAGYDGETIGEIQVRGSNLFSGYLNRPEATAAAFDGDWFRTGDMAVRDADGSVRIVGRKATDLIKSGGYKIGAGEIENALLDHPGVREAAVTGEPDPDLGERVVAWIVPAAADPAARPSADELVAHVAGQLSPHKRPREVRFLDALPRNDMGKIMKRALGARAAGS
>NZ_CP042266.1|WP_146479921.1|2121727_2122960_+|MFS-transporter
MTGCVDRADSSPFAAYRNLITATVGFTLTFWAWNLVSPLGGYYKDHLHLSSFEQSLLVAVPVLVGSLGRVPVGALTDKYGARRMFPLVSAATIVPVLLLIPAKDSYGAMLATGFLLGLGGTTFAIGVPLVNSWFPPARRGLAIGIFGMGMGGVALSGYFTPRIAAHEENLPFYVVAAALACFAALAAVLITDRPDRPVPTEPLGVRLARAGRLRVTWELSALYAIGFGGIVAFGVYLPTYLRTWYGLDATDAGTKAAGFALVTVVFRPLGGWLSDRIHPAHVTSAALGLVAVMAIVQAFDPALTPGGTIALLLMAAGLGAASGSVFALVARVTPQTQVGSVTGIVGAMGGLGGFVPPLVMGAIYSAKGSYSIGFMLLSDLALAGCVYAYGRMRTAGTAPAKSTESTGVRD
>NZ_CP042266.1|WP_146479927.1|2132113_2132413_+|YtxH-domain-containing-protein
MRYKLTFLAGLGVGYVLGTRAGRERYEQLRKSVRELSQNPAVRNAAESAAQNGRSLAGKALHVVSDKVGDRVPESVAERVRSLRERGQNGADDWGTSNT
>NZ_CP042266.1|WP_146479928.1|2132565_2134089_+|sugar-kinase
MGIVAGLDSSSAFTRIVVCDADTGTVVRQGYAQHPVDPKATDIDPQMWLLSLGEAAAGGLLEGVQAIGVSAQQHGLVALDQQGAPVRPALVGNDRRAQIAAADLVDALGGQQAWVEAVGSVPQAALPVSKLRWLARAEPEAAQRVAAVLQPHDWLVWQLLGRPARRTTDRGAASGTGYWSAATGGYRHDLVELALGHHCELPEVLGPAEAAGTTPEGLLISAGTGETMAAAFGLGVGPGDAVVSLGASGSVMAVHHEALADPSGMITSYADAGGMQLPVVHTSNAVRALRGTAEMLGAEDLGALSDLAMKSTPGASGLVLLPYLEGERTPRLPHTAGTLSGLRRESMRPEHLARAAFEGMLCSLADAMDVLRGRGVQVRRVFLLGASADLPAVRAAAPGILGAQVVVPQPADYAALGAARQAAWALGVERGALSPASPPVWQPPALEVLEPGEEAAVGTAVRQQYGATRDQFYPGAFPPVPALPPAHGGYGGPGAGPADLGLGGILG
>NZ_CP042266.1|WP_146479929.1|2134416_2136150_+|ATP-binding-cassette-domain-containing-protein
MLIRLLQTHLRPYRRAIALLVLLQLLQTSATLYLPTLNADIIDDGVVKGDTGLVLRLGGVMLAVSLVQVVCNIGAVYYGARTAAALGRDIRAAVFDRVQSFSAREVGRFGAPTLITRTTNDVQQVQMLVLMAFTLMVSAPIMCVGGVAMALGQDVALSAVLLAVVPVLGIAVTVIVIRMRPLFRTMQERLDTVNRVLREQITGNRVIRAFVRDAYERERFRGANAGLTDVSMATGRLMALMFPTVLTVVNVSSVAVVWFGAQRIDSGAIQIGALTAFLAYLMQIVMAVMMATFMFMMVPRAEVCAERIEEVLGTESSVVPPRRPVRKLTRHGALELRDVEFRYPGAEEPVLRGVSLAARPGETTAIIGSTGSGKSTLLGLVPRLSDATGGEVLVDGVDVRELDPALLTRTVGLVPQKPYLFSGTVATNLRYGSPGASDEELWRALEVAQAADFVRRLDGGLDAPIAQGGTNVSGGQRQRLAIARTLVQRPEVYLFDDSFSALDYTTDAALRSALSAETAEATVVIVAQRVSTIREADRIVVLDEGRVVGSGTHHELMERNDTYREIVLSQLTEAEAA
>NZ_CP042266.1|WP_146479930.1|2136146_2138087_+|ATP-binding-cassette-domain-containing-protein
MSGPRAMMAASAERSMDFKGSGKRLLRQLAPDRRLLWVMLAAAVLSVGLSAVGPWVLGKATDLVFAGVVGRETAESGATKGEVVSGLRADGDDGLADMLSGVAFTPGEGIDFTAVGQVLLIALVLFLLSGLLALVASRCSIKVINRAMSRMREDVQAKLERLPLSYFDRAKRGEVLSRVTNDIDNVSQTLQQTMGQLINSLLTIVGVLAMMFWISPLLALVALVTVPLSVVVAARIGKRSQPHFVQQWKSTGKLNAHVEEMYSGHALVKVFGRQEESAREFAEQNDALYEAGFRAQFHSGVMQPVMFFLSNLNYVLVAVVGGLRVASGSLSIGDVQAFIQYSRQFSMPLSQVASMANLVQSGVASAERVFELLDAEEQAPDARPAEVRTAVDGAARPAGRVALEKVSFRYEPDRPLIEELSLRVEPGQTVAIVGPTGAGKTTLVNLLMRFYEVTGGRITLDGVDAAALPRDELRSGIGMVLQDTWLFGGTIAENIAYGAAREVTRDEIEEAARAAHADRFVRTLPKGYDTVIDDEGTGVSAGEKQLITIARAFLSDPVILVLDEATSSVDTRTEVLIQKAMAKLAEGRTSFVIAHRLSTIRDADVILVMENGSIVEQGTHGELLAAGGAYAGLYSAQFAQAVAEVD
>NZ_CP042266.1|WP_146484172.1|2138242_2139397_-|sigma-70-family-RNA-polymerase-sigma-factor
MTLEVAPVQTRTRTLGQTPLAPPAQPPASAGPLADGPTGSRGDPAGTARSLPPGHPEGADEADAVEVPEAARALNRADSGGPSSDLFRQYLREIGRIPLLTAAEEVELARCVEAGLFAEEKLAGTPDINNSRLAVDLDRLVVLGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQEHGHEPTAEEVAAQLDLPPERIGEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDAASPVESAAFLLLREHLEAVLSTLGERERKVVQLRYGLVDGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRGYLD
>NZ_CP042266.1|WP_146479931.1|2140114_2142052_-|DNA-primase
MAGRINDDDVKAVRDAVPIDSVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGLFHCFGCQEGGDTIAFVMKIDHLTFSETVERLAAKAGITLRYEEGGYNPAHQRGERIRLIEAHKVAAQFYIDQLENGAEAETGRAFLADRGFDRAAAEHFGVGYSPQGWDHLTRFLRGKGFSDKELTLSGLAQDGRRGPIDRFRGRLMWPIRDIAGDVVGFGARKLYETDNGPKYLNTPDTAIYKKSQVLYGIDLAKKEIARTSSAVVVEGYTDVMACHLAGVTTAIATCGTAFGGDHIKILRRLLMDHATAEVIFTFDGDAAGQKAALRAFEDDQKFAAETSIAITPGGMDPCELRLAEGDEAVRGLVGSRTPLFEFALRQLVKRHNLETPAGRAAALDEAAPIVAGIKNGAIQHESAVQLAGMVGILDTQFVVKRVAQLARWARDRGGRGPAGGPARGNGSGGDHRGPGPGPAGPPAAGLPAGPALNLRSPAHRTERELLKLALQRPELVSPTFDAYGSDEFTAPPYTAVRQTIAEAGGAEQGTADAAGYLARVREAAADDTVRALVTELAVEAIHCRTIDETYAGVQLVQVRLRAVDRRIAEVQGTLARLGQTADPAQYTAVQNELWVLQQYAQSLRNHGAAAL
>NZ_CP042266.1|WP_146479932.1|2142129_2143404_-|NAD(P)/FAD-dependent-oxidoreductase
MVDGEQTFVIVGGGLAGAKAAETLRSEGFTGRVILIGDERDHPYERPPLSKGYLQGKDSRESVFVHEPAWYAQADVELHLGQSVVAVDRAARAVRLGDGTVVHYDKLLLATGAEPRRLDVPGTGLAGVHHLRRLAHAERLRQVLTGLGRENGRLVIAGAGWIGLEVAAAARGYGAEVTVVEPEPTALHHVLGPELGQFFTDLHTEHGVGFHFGARLTEITGQDGMVLAVRTDDGEEHPAHDVLAAIGAAPRTALAEAAGLAVVDRADGGGIAVDAALRTSDPDIYAAGDVAAAENPLLGSRIRVEHWANALNGGPAAARSMLGRDTVYDRVPYFYSDQYDVGMEYSGWAPPGSYDQIVLRGDAGKREFIAFWLAGGRVLAGMNVNVWDVTEPVQELIRSGAPVDPEALADPSVPLTELAGRVSG
>NZ_CP042266.1|WP_146479933.1|2143558_2144995_-|deoxyguanosinetriphosphate-triphosphohydrolase
MEGTTGTTSNGPGPRGPHPHAYGHPAAPGPGGAQEHPGHPRDPGSYGGGGGSGDDVFGYDETATARWAPEPDKRPGRTAFQRDRARVLHSAALRRLAGKTQVVTPGTRNQAWDASPRTRLTHSLECAQVGRELGAALGCDPDLVEAACLAHDLGHPPFGHNGEVALNEVARDCGGFEGNAQSLRLLTRIEPKRFLTPEDGAPVSVGLNLTRAALDAATKYPWPLGGHPTDPGSVKFGVYEDDLPVFAWVRDGAPRHRRCFEAQVMDWSDDVAYSVHDFEDGLHAGHIDPNLLLAEPERAEIWRVALGRYVPADTDPAELAEALDRLLDQEWWPHHYDGSAPAQARLKDATSQLIGRFCLAAEGATRQTYGTGRLTRYAAELVVPPATRNECAVLKAVADRYVMQRAEQEAIRADQRVVVAELAEALTRRAPDGLDPQFRALFDAAPDDRARGRVIVDQIAALTDASAVTLHAQLTARR
>NZ_CP042266.1|WP_146479934.1|2145119_2145878_+|hypothetical-protein
MRRSLGGLWARLRERVPGRVRSGAAALRVPRPRLPRSRRGRRRLAQVVMAGAVLALAPTTWLHLSAGDRVRTVADVPAQDVAVVFGAGLWDGRPTPYLAHRLDAAAELYRTGKVKVVLVTGDNSREDYDEPDAMRTYLTGQGVPDGRIVSDYAGFDTWDSCVRAKKIFGVDRAVLVTQGFHIRRALALCGSAGIEAYGIGVSEPRDATWYHGEVRDLVAAGKAALDTVLEPDPRFLGAKERGVQEALTAAGR
>NZ_CP042266.1|WP_146484173.1|2145957_2146539_+|TIGR03086-family-protein
MEQDRTTLLARHSAALALFTERVHAVRPGQWDEPTPCTEWSVRDLVNHLTAEQLWVPDLVTDGARIAEVGDMYDGDVLGGDPRAAWDAAARAARRAFAAPGALERTVGLSYGETPAVAYCAQMTTDAVVHSWDLSRAIGAPERLPDDLVAFALDEVTPYAAQLSQTGLFAPPVEPPPGDSHQARLLALLGRRA

Crispr_ID: NZ_CP042266_4

• CRISPR_ID: NZ_CP042266_4
• CRISPR_location: 2231277-2231373
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP042266_4

Consensus_repeat	Method
CCGGGCGGAGCCCCGGGCCGCCG	CRISPRCasFinder

spacers of NZ_CP042266_4

>4.1|2231300|51|NZ_CP042266|CRISPRCasFinder
CCCGGGCCGCCGAGGCCGGGGGCGGACGCCCACGGGATCAGCCGGAGTCAG

CRISPR arrays and Neighbor proteins around NZ_CP042266_4

CRISPR arrays

The CRISPR arrays of NZ_CP042266_4

>merge|NZ_CP042266|4|2231277-2231373|CRISPRCasFinder
CCGGGACGAGCACCGGGCGGAGCCCCGGGCCGCCGAGGCCGGGGGCGGACGCCCACGGGATCAGCCGGAGTCAGCCGGGCGGGGCCCCGGGCCGCCG

>NZ_CP042266|4|4|2231277-2231373|CRISPRCasFinder
CCGGGACGAGCACCGGGCGGAGC	CCCGGGCCGCCGAGGCCGGGGGCGGACGCCCACGGGATCAGCCGGAGTCAG
CCGGGCGGGGCCCCGGGCCGCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146484186.1|2234323_2235430_-|glutamate-5-kinase	unknown	unknown	gnl|CDD|235460
NZ_CP042266.1|WP_146479992.1|2229441_2230608_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146479986.1|2220955_2222422_-|MFS-transporter	unknown	unknown	gnl|CDD|129794
NZ_CP042266.1|WP_146479993.1|2231513_2232074_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146484185.1|2222689_2223505_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|375319
NZ_CP042266.1|WP_006349338.1|2243814_2244069_-|50S-ribosomal-protein-L27	unknown	unknown	gnl|CDD|235464
NZ_CP042266.1|WP_146479995.1|2233667_2234189_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146479997.1|2239658_2241920_-|glycosyltransferase	unknown	unknown	gnl|CDD|340847
NZ_CP042266.1|WP_146479991.1|2227977_2229087_+|M48-family-metalloprotease	unknown	unknown	gnl|CDD|320684
NZ_CP042266.1|WP_146484187.1|2235676_2237719_-|hypothetical-protein	unknown	unknown	gnl|CDD|367953
NZ_CP042266.1|WP_146479999.1|2244083_2244404_-|50S-ribosomal-protein-L21	unknown	unknown	gnl|CDD|235510
NZ_CP042266.1|WP_146479989.1|2225028_2226810_-|LytR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|379163
NZ_CP042266.1|WP_146479987.1|2223799_2224456_-|histidine-phosphatase-family-protein	unknown	unknown	gnl|CDD|366010
NZ_CP042266.1|WP_146479998.1|2242154_2243594_-|GTPase-ObgE	unknown	unknown	gnl|CDD|237045
NZ_CP042266.1|WP_146479990.1|2226829_2227474_-|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl|CDD|234611
NZ_CP042266.1|WP_146479994.1|2232183_2233470_-|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|234685
NZ_CP042266.1|WP_146479996.1|2237962_2239462_-|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|133009
NZ_CP042266.1|WP_040916346.1|2220482_2220716_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146479988.1|2224452_2224884_-|ribosome-silencing-factor	unknown	unknown	gnl|CDD|376779
NZ_CP042266.1|WP_146479985.1|2218525_2220082_+|oxidoreductase	unknown	unknown	gnl|CDD|224806

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146484186.1|2234323_2235430_-|glutamate-5-kinase	gnl|CDD|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0
NZ_CP042266.1|WP_146479999.1|2244083_2244404_-|50S-ribosomal-protein-L21	gnl|CDD|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	8.23129e-39
NZ_CP042266.1|WP_146479986.1|2220955_2222422_-|MFS-transporter	gnl|CDD|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.11211e-44
NZ_CP042266.1|WP_146479988.1|2224452_2224884_-|ribosome-silencing-factor	gnl|CDD|376779	pfam02410, RsfS, Ribosomal silencing factor during starvation. This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases.	4.59292e-41
NZ_CP042266.1|WP_146484185.1|2222689_2223505_+|helix-turn-helix-domain-containing-protein	gnl|CDD|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	5.20563e-40
NZ_CP042266.1|WP_006349338.1|2243814_2244069_-|50S-ribosomal-protein-L27	gnl|CDD|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	4.8753e-47
NZ_CP042266.1|WP_146479991.1|2227977_2229087_+|M48-family-metalloprotease	gnl|CDD|320684	cd07325, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase. This family contains peptidase M48 family Ste24p-like proteins that are as yet uncharacterized, but probably function as intracellular, membrane-associated zinc metalloproteases; they all contain the HEXXH Zn-binding motif, which is critical for Ste24p activity. They likely remove the C-terminal three residues of farnesylated proteins proteolytically and are possibly associated with the endoplasmic reticulum and golgi. Some members also contain ankyrin domains which occur in very diverse families of proteins and mediate protein-protein interactions.	3.75059e-79
NZ_CP042266.1|WP_146479997.1|2239658_2241920_-|glycosyltransferase	gnl|CDD|340847	cd03820, GT4_AmsD-like, amylovoran biosynthesis glycosyltransferase AmsD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.	1.44675e-76
NZ_CP042266.1|WP_146479989.1|2225028_2226810_-|LytR-family-transcriptional-regulator	gnl|CDD|379163	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator. This family appears at the C-terminus of members of the LytR_cpsA_psr, pfam03816, family.	1.83085e-10
NZ_CP042266.1|WP_146479987.1|2223799_2224456_-|histidine-phosphatase-family-protein	gnl|CDD|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	1.06344e-62
NZ_CP042266.1|WP_146479998.1|2242154_2243594_-|GTPase-ObgE	gnl|CDD|237045	PRK12296, obgE, GTPase CgtA; Reviewed.	0
NZ_CP042266.1|WP_146479990.1|2226829_2227474_-|nicotinate-nucleotide-adenylyltransferase	gnl|CDD|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	1.91561e-102
NZ_CP042266.1|WP_146479994.1|2232183_2233470_-|glutamate-5-semialdehyde-dehydrogenase	gnl|CDD|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP042266.1|WP_146479996.1|2237962_2239462_-|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|133009	cd02516, CDP-ME_synthetase, CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.	7.21574e-74
NZ_CP042266.1|WP_146484187.1|2235676_2237719_-|hypothetical-protein	gnl|CDD|367953	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerization of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.	0.0040817
NZ_CP042266.1|WP_146479985.1|2218525_2220082_+|oxidoreductase	gnl|CDD|224806	COG1894, NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion].	2.18624e-43

Protein sequences

>NZ_CP042266.1|WP_146479992.1|2229441_2230608_-|hypothetical-protein
MAGRGDPPEGTPEGLPGGGEDEYGAVVFDESFVRAARLQEYSARERTGPDARAVRTLPPPVLHARPGNGGAWVVMGLALLLALSLATAIHIGLRRAQSVPAAAPRAEPLRMTVIPLAPPGPVPGGEPADLYHRSPAAHHRIAAAGITLPAIRRTSGFSESEVRTALVVAKEYLVMSSLNPAVLTGDTVRPVRVLLDPAQLDAFDRDVGFRAGGARPSGTGWLLRFDPAKVALADPAVRVRGSLRYTESGADTLEIASSHTFTYALRPAAPPGASRAPSATPGPADPGRTDPASLFVARRELRLRFDHEDILRHRTELVASHLQAGPQSCSGESTSALRPLLAGERAAPGAPAGTDPYANGTSPAAGLCGALAPAAQPTPSPQPAPPAD
>NZ_CP042266.1|WP_146479991.1|2227977_2229087_+|M48-family-metalloprotease
MTESSHDKVPSRQRKRFPGISSRAYEHPADRSALVALRKLSGFDTVFKALSGLLPERSLRLLFLSDSVRVSDEQFAHLHAMLRDACYILDLEKVPAMYVTQDPRPNAMCIGLDEPIIVVTTGLVELLDEEEMRAVVGHEVGHALSGHSVYRTILLFLTSLALKIAWVPLGNVAIMAIVTALREWFRKSELSADRAGLLVGQDLQASMRGLMKIAGGNHLHEMNVDAFLRQAEEYEAGGDLRDSVLKIMNVLPRSHPFTTVRAAELKKWAESRDYQRLMDGHYPRRDEDKDTSVTDSIRESASHYADTVRTSKDPLMKLVGDIAGGAGDLGGKLRDKFTGGGRANGSGESGSSGDGESSGSNGSKGSSGS
>NZ_CP042266.1|WP_146479990.1|2226829_2227474_-|nicotinate-nucleotide-adenylyltransferase
MGQQEEQAGTAPGVPGDGPARRRLGVMGGTFDPIHHGHLVAASEVAALFHLDQVVFVPTGQPWQKTHEVVSPAEDRYLMTVIATASNPQFSVSRIDIDRPGKTYTIDTLRDLRNLNEDTDLFFITGADALSQILGWRDATELFSLAHFIGVTRPGHDLTDDGLPEGKVSLVEVPALAISSTDCRGRVAKGDPVWYLVPDGVVRYIDKRQLYRGQ
>NZ_CP042266.1|WP_146479989.1|2225028_2226810_-|LytR-family-transcriptional-regulator
MNDQQNPYDPYPPQPQIIGYDAYGQPVYQQPQQPHEAQQPHEQQYDSSYQQSEQGYDQPYQQPYDPYAQQAPGPSGHQDYGYDPHQGQTPEPYPPYEQTTPGEQTPGQPYGYDRTYGQEGYGYDTGTLPTAVDSTQQWTVPPQQPAPGAEQPPADGPAEADPRAAALPGQRRSGEEPSEERDYRTEQFSFIAEPDEESEDVIDWLKFTESRSERREEAKRRGRNRVVALGVALGLVVVAGIGWIVAAAMSGEEKKSVSAGAQKRDVIVVHLHNTKKKGTSTALLVDNVTTGRGTTVLLPSALSVADDNGVGTTLGKSVEADGTAGTREAVGTLLGARISGTWRLDTPFLENLVELVGNIELTTDTEVPGAAKGAAPLVKKGENQTLNGRAAVAYATHLAAGEPESKQLQRFGQVVQGVLKKFPSDAESATVTVETLGQILDPSLSEKDLGASLAKLADHAKGGDYATALLPVQPDGKPTEQAINQVVKDVLGGSVGGSEQGAAVRIGVRNATGKPAATEAARVSLVNSGYTVVDGGRADTAGTSTVTYGDAKHQTEATEVAKTLGLPATAVKKGTPAANADIAVVLGGDYKTG
>NZ_CP042266.1|WP_146479988.1|2224452_2224884_-|ribosome-silencing-factor
MTATERSVELVNAAAQAAADRLAHDIIAYDVSDVLSITDAFLIASAPNDRQVKSIVDEIEERLLKDLGAKPVRREGDRDARWILLDYVDIVVHVQHSEERVFYALERLWKDCPELSLPEDAVKTRGKGKEHAELTGGADGELN
>NZ_CP042266.1|WP_146479987.1|2223799_2224456_-|histidine-phosphatase-family-protein
MNEDAYKRTGRRLVLWRHGQTSWNLERRFQGTTDIALTETGITQARRAARLLASLEPDAIIASDLKRAAATAGELADVTGLDVTYDEGLRETYAGAWQGLTHQEIIERYNEQYTAWKRGESVRRGGGELETEVADRAAPVVLHHAEKLPENGTLVVVSHGGTIRTTIGRLLGLESGHWESLGGLSNCCWSVLGEGARGWRLLEHNAGTLPEPVLGDDT
>NZ_CP042266.1|WP_146484185.1|2222689_2223505_+|helix-turn-helix-domain-containing-protein
MAAFLRSRRARVTPADVGMPPGLRRRTPGLRREEVAQLSGVGVTWYTWLEQGRPINASPQVLNAVARTLRLDASEREHLYHLAKVPYEQRPGADVDEDSGGVGPEIRSILDALDPRPAVVYNSRYDVLATNRSYDRLFRTDLFQGPGRKNALWTLFAAADKDDCPMRHPEVELPLMVAQFRAAYGRHVGDPVWESFVRELSRSSEYFAELWRSGNVVHPGPRVKVFRHPGVGEMRWSSVSMEINGLPECRMVVYSPGDEESARRLDTLPRL
>NZ_CP042266.1|WP_146479986.1|2220955_2222422_-|MFS-transporter
MSTTSTPLPAPPGSPASSKDPGTDNRPGALLALVLAAQFMALLDVFVVHVAAPTIRTELGASSAQLQLVVAGYTVAYAILLITGARLGELIGHRRAWLAGLALFTAASLACGLAAETGQLIAFRLVQGAGAALLIPQVLSLIQRNFTGEARVRALGAYAAVLAVGAVAGLVAGGLLVSADLLGLGWRPVFLINVPIGAVLLVLGARVLPPDRPAGRGRGLDLPGLVLFAAVVGLFTVPLVLGQEHGWPAWTWSSLVATAVLLAVFLVYEARPARRGGAPLIAPRVLRIPGMGTAVARIALAMAVNAGCVFALTLHLQNGLGYGALRAGLTALPTALAFGVTGLTWRRLPASLQPALVPGGFAVTALALLASGVLLRDGDGGGLPLYAALAALGAGLAAAYSPALAGALATVRTEDAADASGLLVTVTQLGQIVGVAAFGSFFLDRRAAFGQGGAVGAAGSADAWWWVAAALAAASVAGTFAGLVRKRS
>NZ_CP042266.1|WP_040916346.1|2220482_2220716_-|hypothetical-protein
MGAHRRKCDWCGSGTPIVRDMDPINPEYQYWCEECARALIIKGDPIETYRELEGEPIYGRLLDEHCTLKRFYSFATA
>NZ_CP042266.1|WP_146479985.1|2218525_2220082_+|oxidoreductase
MNIPLPDVPEVRAVGLPQLTRGFDLVDRLDLPTHLKVHGPLAPVPGELLARLAEGIALRGRGGAGFPFGRKLRSVADSAIRRGVRPVVVVNGSEGEPACRKDTVLLNRAPHLILDGALLAAEALGARTLVVAVTRDSTEISVRAALAERGLTNRRGRSLRARVVRTPERMVSGEASSVIRAINGGPALPPGRRSRAAGSGVGGAPTLLSNAETFAQLAVAARIGADRFRRSGTDSEPGTVLLTVSGAVARPMVVEVPTGVPLRYVLRLAGAPPFPQGVLTGGYHGNWIYGPAVDETVVSRASLAAVGGSLGAGAILPVGPETCPLGEALRVASWLAAETAGQCGPCRLGLPAAAGGLADVIGGGGPAALEALREVTRAVQGRGACKHPDGSARFFTSALSVFTDDLAAHVLRGTCGRETTGVLPLPLPGYREAEKAVPSGEKMLIDWTLCQGHGLCADLVPELIRIGPDGYPTVADAVVPAHLRGRAQRAVRRCPALALRIERTRLPAPGTALILRQR
>NZ_CP042266.1|WP_146479993.1|2231513_2232074_-|hypothetical-protein
MPDDVGGRPFPDGWEPDDDRGGADENLAPVVFDEDFVNAATFHEPTAVERLLAAAEARAEAEAARAAGRGPGAPDDEPHSGAYDGYDGLPGPHADWSDPYGSHGGALRPYRGTARWHRPVAWALALLMGIGMVALAFTAVYRGASGSRQDQIPPPATTGVDRTPTAPATVAPPAPLRDHVPTPDPG
>NZ_CP042266.1|WP_146479994.1|2232183_2233470_-|glutamate-5-semialdehyde-dehydrogenase
MTTSPSPQESLSPVGRAARLARSAAEQLAPLPRAAKDAALLAVADALEARTDEIVRANAEDVARARENGTGESIVDRLTLTPERVRAIAADVRDVVALPDPVGEVVRGSTLPNGLDLRQVRVPLGVVGIVYEARPNVTADAAALCLKSGNAVLLRGSSSAYASNTALVRVIRDAVAEAGLPADAVQLVPGESRESVQELMRARGLVDVLIPRGGAGLIRTVVEQSVVPVIETGTGNCHVYVDAEADLDMAVSVLINSKAQRPSVCNAAETLLVHRDIAPVFLPRALDALAEAGVTVHGDEAVAAYGDDSKATVVAATEEDWETEYLSYDIAAAVVDSLDDAVAHIRRWSSGHTEAIVTTSQAAARRFTRLVDSTTVAVNASTRFTDGGQFGFGAEIGISTQKLHARGPMGLPELTSTKYILTGDGHIR
>NZ_CP042266.1|WP_146479995.1|2233667_2234189_-|hypothetical-protein
MTIARPGDIPRGNNGVRCVHGSTGTERPGPAAGRTVRSERTLTSVGDRAPAPGDDQAQSAVSKLWHITLSVSGAEAPLTEVRRGLEQLAHDHPFLLTSRYANDHAEIRYWEEARDLHDAAAVALRLWGEHRATAQLPPWTIVGLEVIDRQTYHQRLAEGYGPPPAARVGVHPF
>NZ_CP042266.1|WP_146484186.1|2234323_2235430_-|glutamate-5-kinase
MAQARRIVVKVGSSSLTTAAGGIDADRVDALVDVLAKVRSGGEKEIVLVSSGAIAAGLAPLGLARRPKDLARQQAAASVGQGLLVARYTASFARHGVRVGQVLLTADDTSRRAHYRNAYRTLDQLLAMGAVPVINENDTVATDEIRFGDNDRLAALVAHLVRADLLVLLSDVDGLYDGDPARPGTTRIDEVRGPADIAHVQIGSAGRAGVGTGGMVTKVEAARIATEAGVPVVLTSAVSAADALAGRTTGTFFHRTGRRSAGRLLWLAHASTPQGALVLDDGAVRAVVQGRKSLLPAGIAAVEGDFTAGDPVELRDTGGRPVARGLVNYDARELPPLLGRSTRELARELGPEYEREVVHRDDLVVMHP
>NZ_CP042266.1|WP_146484187.1|2235676_2237719_-|hypothetical-protein
MLAALLPSIPFFVAAAAVTYLADWYLHQKGSYLLNRLSKVRVGLPIRFLLRQLLLVLLLAREGLAETPLFYTAVAGFLVLYGLQAPHGALTTLIRLRRTLPVVTRNVDLHAVRIPDAPPRPLLRRAGEKMLHLDLPAVAGVLIAAATGRDAIGYAGIAATVALGLLYTAILVPYLRSRRVPPAPKVLKAVNQWLREYRPTVVLYFSGGNSSAYQVNMWLETLEQIDGRPLIVMRERELMPKLTETAVPVLCVPGGTHTMNLDLSTVRVALYSANVGKNIHILRQPAMKHVFIGHGDSDKLASVNPFSKVYDEVWTAGRAGRDRYALADVGVRDEDIVEVGRPQLAPIAGWTGRTRNPVPTVLYAPTWEGWDDSPGNTSLLLAGENIIRRLLDAERPVRVIYKPHPFTGIRNKKAKAVHERITALLKTAAAERRDDPRWAAESAAGKAARERAAARTAAVEAELAGLLKPGRTGGDEAERSRDAVSDPVRLARIAQLRAEWNEAYWAAAGWWEHRVVTGNEPRLYDCFNESDAMVSDISSVVSDYMASGKPYAVTDSAALGADEFQRQNTAARAATVLSNSAVELDQLLAAVASPEDDLLAGARRELKQYLLGPDRPTSMERFNSAVRTLQAVAEARNRGVEQRIGEQAAAIRPAAVPSDDPAEESVTAEETNGSEAPVAG
>NZ_CP042266.1|WP_146479996.1|2237962_2239462_-|SDR-family-NAD(P)-dependent-oxidoreductase
MSAPHVAKPRTTAVVLAGGTGQRVGLSIPKQLLKIAGKAVIEHTLTIFEQADAIDDVIVLMAPGFVPDVEKIITRAGLTKVRRVIEGGATRNETTERAITALGDGLAPGEDINVLFHDAVRPLLSQRVIQDCVDALDRYQAVDVAIPSADTIIVTRTHGEDGEFITEVPDRSRLRRGQTPQAFKLSTIRRAYEISAGDPNFQATDDCSVVLRYLPDVPIHVVAGDEYNMKVTQPVDVFLADKLFQLASTAAPAQADEAAYRELLAGRTLVVFGGSYGIGADIAALAERYGARVYALGRSTTGTHVENPEHVDDALSRAYAETGRIDYVINTAGVLRIGKLAETDNSTILEALNVNYLAPVQIARAAYKYLAETKGQLLLYTSSSYTRGRAEYSLYSSTKAAMVNLTQALADEWAGDGIRVNCVNPERTATPMRTKAFGAEPAGSLLSSEAVARTSLDVLLSDLTGHVVDVRQQDPTRDASEASGFDQALAALLDRQGDV
>NZ_CP042266.1|WP_146479997.1|2239658_2241920_-|glycosyltransferase
MKISFLIHTIYGIGGTIRSTLNLAEELVGRHEVEIVSVFRHRDVPLFPVDPRITLIGLVDTRPGSPDGSSDGSSDGSSDGSSDGSSDGSSDGSSDGSAEGEPGGGTAHREPSALMPRHENRYREYSALTDERIHAHYAASDADVVIATRPALVPCLARSAPQNAVLVGQENMSLGYHGPELVEELLPGLDVLDALVTVSEADAAAWRARLPQPDTRVVAVPNGVPEPTLAPAALRERTVVAAGRISREKQYDTLLVAFARVVAAHPDWRLRLYGWGPDRERVRRVVHRLGLHNSVELMGAVVPMEAEWVKGSIAVSTSRHESFGLTLVEAMRCGLPVISTDCDHGPRTIVTDGEDGLLVPVGDSGAVADALLRLIQDEPLRRRLGGAARTAARRFDPAGTAKAYEELFAELGAGPLHRTGPDAAAVSRTRPFAPVADCGTGDDGSVTVRIVTPAAAAMQYPGLRLVCTRADTGGGTDSGTGPAKGRTRTGGRKGAKGGSRPRGRTATAPDRTEHVFPFAPDGTAVVPPGAGLADGLWLCHTEDPRTGRRAELTARTVDQRGVLRAGERFTRDTAVRHLVPFRDPAGHRLTLRSWVRRLHVESGDITLDEHRFTLTGRIHGPVEPAGEPTLVLRRGGDPADEMVFHGTREGTRGFAVTFDGEAVAERREREDEQWELWLRYSPEQDPVAVGRLLDDVLRKSDVRGFPEVLLHKQRSLLLARRVLRRIRGQDQRLVVLKLAFDDGNRLVLHVRDR
>NZ_CP042266.1|WP_146479998.1|2242154_2243594_-|GTPase-ObgE
MTTFVDRVELHVAAGSGGHGCASVHREKFKPLGGPDGGNGGRGGDVILVVDQSVTTLLDYHHSPHRKATNGQPGEGGNRSGKDGKDLILPVPDGTVVLDKQGNVLADLVGHGTSFIAGQGGRGGLGNAALASARRKAPGFALLGVPGEARDVVMELKTVADVALVGYPSAGKSSLISVLSAAKPKIADYPFTTLVPNLGVVTAGSTVYTIADVPGLIPGASQGKGLGLEFLRHVERCSVLVHVLDTATLESDRDPLSDLDVIEEELKQYGGLDDRPRVVVLNKIDIPDGQDLAEMVRSDLETRGYRVFEASAVSRTGLKELSFALAGIVAEARAAKPKEEATRIVIRPKAVDDSGFTVVREEDGLFRVRGEKPERWVRQTDFSNDEAVGYLADRLSRLGVEEKLMKAGARAGDGVAIGPEEDAVVFDWEPTVMAGAEMLGRRGEDHRLEAPRPAAQRRRDRDAERDEADREYDDFDPFQ
>NZ_CP042266.1|WP_006349338.1|2243814_2244069_-|50S-ribosomal-protein-L27
MAHKKGASSTRNGRDSNAQRLGVKRFGGQVVNAGEILVRQRGTHFHPGAGVGRGGDDTLFALQAGAVEFGRHRGRKVVNIVPVA
>NZ_CP042266.1|WP_146479999.1|2244083_2244404_-|50S-ribosomal-protein-L21
MYAIVRSGGRQHKVAVGDIVEVDKIPTAKVGDTVELSTLLVVDGDAVTSDPWVLAGIKVEAQVVDHHKGAKIDILRYKNKTGYRRRQGHRQQYTAIKVTGIPTAAK

Crispr_ID: NZ_CP042266_5

• CRISPR_ID: NZ_CP042266_5
• CRISPR_location: 2376256-2376940
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 10 spacers
• Cas_protein_info: casR,cas6

Consensus repeat of NZ_CP042266_5

Consensus_repeat	Method
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	CRT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	PILER-CR
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CRISPRCasFinder

spacers of NZ_CP042266_5

>5.1|2376286|37|NZ_CP042266|CRT
ACCAGCAGGCTTGCCCGCTTGCGCGATTCATGCAGGG
>5.2|2376353|35|NZ_CP042266|CRT
AGGCTTTGGAGCTGCCGCGCCGCAAGCGCCGCGCG
>5.3|2376418|36|NZ_CP042266|CRT
AGCTGAAGCTCGGTGCCGCGGTGCCTGTGGCGGCCG
>5.4|2376484|34|NZ_CP042266|CRT
ATCTTCAGCGCGGCGCAGGTGTCCGGCGGGGGCC
>5.5|2376548|36|NZ_CP042266|CRT
GTGACGATCGCGACGTGCCCGGGCCAGAAGACCAAG
>5.6|2376614|36|NZ_CP042266|CRT
GCTCATGGCTAACCCCCAGGTGCGTTCAACCTGTTC
>5.7|2376680|36|NZ_CP042266|CRT
GTGCGGCGGGTGCCGAGGCGGGGCCAGCCGAGACTG
>5.8|2376746|36|NZ_CP042266|CRT
GTCGTGGGTCCGGTCTGGCCGGCTCCCCTCACCGCC
>5.9|2376812|35|NZ_CP042266|CRT
AGAGGTACAAGAACAGTCGTTCGGGCGCGGTACTC
>5.10|2376877|34|NZ_CP042266|CRT
GCAAGCTGCGCGGCAAGGGCGTCCGACCGTCCGT
>5.11|2376286|38|NZ_CP042266|PILER-CR,CRISPRCasFinder
ACCAGCAGGCTTGCCCGCTTGCGCGATTCATGCAGGGG
>5.12|2376353|36|NZ_CP042266|PILER-CR,CRISPRCasFinder
AGGCTTTGGAGCTGCCGCGCCGCAAGCGCCGCGCGG
>5.13|2376418|37|NZ_CP042266|PILER-CR,CRISPRCasFinder
AGCTGAAGCTCGGTGCCGCGGTGCCTGTGGCGGCCGG
>5.14|2376484|35|NZ_CP042266|PILER-CR,CRISPRCasFinder
ATCTTCAGCGCGGCGCAGGTGTCCGGCGGGGGCCT
>5.15|2376548|37|NZ_CP042266|PILER-CR,CRISPRCasFinder
GTGACGATCGCGACGTGCCCGGGCCAGAAGACCAAGG
>5.16|2376614|37|NZ_CP042266|PILER-CR,CRISPRCasFinder
GCTCATGGCTAACCCCCAGGTGCGTTCAACCTGTTCG
>5.17|2376680|37|NZ_CP042266|PILER-CR,CRISPRCasFinder
GTGCGGCGGGTGCCGAGGCGGGGCCAGCCGAGACTGG
>5.18|2376746|37|NZ_CP042266|PILER-CR,CRISPRCasFinder
GTCGTGGGTCCGGTCTGGCCGGCTCCCCTCACCGCCG
>5.19|2376812|36|NZ_CP042266|PILER-CR,CRISPRCasFinder
AGAGGTACAAGAACAGTCGTTCGGGCGCGGTACTCC
>5.20|2376877|35|NZ_CP042266|PILER-CR,CRISPRCasFinder
GCAAGCTGCGCGGCAAGGGCGTCCGACCGTCCGTG

CRISPR arrays and Neighbor proteins around NZ_CP042266_5

CRISPR arrays

The CRISPR arrays of NZ_CP042266_5

>merge|NZ_CP042266|5|2376256-2376940|CRT,PILER-CR,CRISPRCasFinder
GGTCGTCATCAACCCAGGAGGGTTCGCAACACCAGCAGGCTTGCCCGCTTGCGCGATTCATGCAGGGGGTCGTCATCAACCCAGGAGGGTTCGCAACAGGCTTTGGAGCTGCCGCGCCGCAAGCGCCGCGCGGGTCGTCATCAACCCAGGAGGGTTCGCAACAGCTGAAGCTCGGTGCCGCGGTGCCTGTGGCGGCCGGGTCGTCATCAACCCAGGAGGGTTCGCAACATCTTCAGCGCGGCGCAGGTGTCCGGCGGGGGCCTGTCGTCATCAACCCAGGAGGGTTCGCAACGTGACGATCGCGACGTGCCCGGGCCAGAAGACCAAGGGTCGTCATCAACCCAGGAGGGTTCGCAACGCTCATGGCTAACCCCCAGGTGCGTTCAACCTGTTCGGTCGTCATCAACCCAGGAGGGTTCGCAACGTGCGGCGGGTGCCGAGGCGGGGCCAGCCGAGACTGGGTCGTCATCAACCCAGGAGGGTTCGCAACGTCGTGGGTCCGGTCTGGCCGGCTCCCCTCACCGCCGGTCGTCATCAACCCAGGAGGGTTCGCAACAGAGGTACAAGAACAGTCGTTCGGGCGCGGTACTCCGTCGTCATCAACCCAGGAGGGTTCGCAACGCAAGCTGCGCGGCAAGGGCGTCCGACCGTCCGTGGTCGTCATCAACCCAGGAGGGTTCGCAAC

>NZ_CP042266|5|1|2376256-2376940|CRT
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	ACCAGCAGGCTTGCCCGCTTGCGCGATTCATGCAGGG
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	AGGCTTTGGAGCTGCCGCGCCGCAAGCGCCGCGCG
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	AGCTGAAGCTCGGTGCCGCGGTGCCTGTGGCGGCCG
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	ATCTTCAGCGCGGCGCAGGTGTCCGGCGGGGGCC
TGTCGTCATCAACCCAGGAGGGTTCGCAAC	GTGACGATCGCGACGTGCCCGGGCCAGAAGACCAAG
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	GCTCATGGCTAACCCCCAGGTGCGTTCAACCTGTTC
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	GTGCGGCGGGTGCCGAGGCGGGGCCAGCCGAGACTG
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	GTCGTGGGTCCGGTCTGGCCGGCTCCCCTCACCGCC
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	AGAGGTACAAGAACAGTCGTTCGGGCGCGGTACTC
CGTCGTCATCAACCCAGGAGGGTTCGCAAC	GCAAGCTGCGCGGCAAGGGCGTCCGACCGTCCGT
GGTCGTCATCAACCCAGGAGGGTTCGCAAC

>NZ_CP042266|5|3|2376257-2376940|PILER-CR
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ACCAGCAGGCTTGCCCGCTTGCGCGATTCATGCAGGGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AGGCTTTGGAGCTGCCGCGCCGCAAGCGCCGCGCGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AGCTGAAGCTCGGTGCCGCGGTGCCTGTGGCGGCCGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ATCTTCAGCGCGGCGCAGGTGTCCGGCGGGGGCCT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GTGACGATCGCGACGTGCCCGGGCCAGAAGACCAAGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCTCATGGCTAACCCCCAGGTGCGTTCAACCTGTTCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GTGCGGCGGGTGCCGAGGCGGGGCCAGCCGAGACTGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GTCGTGGGTCCGGTCTGGCCGGCTCCCCTCACCGCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AGAGGTACAAGAACAGTCGTTCGGGCGCGGTACTCC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCAAGCTGCGCGGCAAGGGCGTCCGACCGTCCGTG
GTCGTCATCAACCCAGGAGGGTTCGCAAC

>NZ_CP042266|5|5|2376257-2376940|CRISPRCasFinder
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ACCAGCAGGCTTGCCCGCTTGCGCGATTCATGCAGGGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AGGCTTTGGAGCTGCCGCGCCGCAAGCGCCGCGCGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AGCTGAAGCTCGGTGCCGCGGTGCCTGTGGCGGCCGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ATCTTCAGCGCGGCGCAGGTGTCCGGCGGGGGCCT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GTGACGATCGCGACGTGCCCGGGCCAGAAGACCAAGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCTCATGGCTAACCCCCAGGTGCGTTCAACCTGTTCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GTGCGGCGGGTGCCGAGGCGGGGCCAGCCGAGACTGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GTCGTGGGTCCGGTCTGGCCGGCTCCCCTCACCGCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AGAGGTACAAGAACAGTCGTTCGGGCGCGGTACTCC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCAAGCTGCGCGGCAAGGGCGTCCGACCGTCCGTG
GTCGTCATCAACCCAGGAGGGTTCGCAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146484200.1|2387332_2388025_+|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl|CDD|273848
NZ_CP042266.1|WP_146480080.1|2380292_2380835_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584
NZ_CP042266.1|WP_146484196.1|2369082_2370543_-|TQXA-domain-containing-protein	unknown	unknown	gnl|CDD|369823
NZ_CP042266.1|WP_146480075.1|2368731_2369082_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146484195.1|2364991_2365735_-|helix-turn-helix-domain-containing-protein	casR	cls001593_casR_CAS-I	gnl|CDD|224332
NZ_CP042266.1|WP_146480074.1|2367080_2368745_-|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl|CDD|236992
NZ_CP042266.1|WP_146480082.1|2383918_2384110_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146480073.1|2366489_2366930_-|acyl-CoA-thioesterase	unknown	unknown	gnl|CDD|223894
NZ_CP042266.1|WP_146480071.1|2364499_2364904_+|globin	unknown	unknown	gnl|CDD|381280
NZ_CP042266.1|WP_146480084.1|2388012_2389431_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146484199.1|2380845_2382171_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146480079.1|2379497_2380067_-|isochorismatase-family-protein	unknown	unknown	gnl|CDD|238245
NZ_CP042266.1|WP_146480076.1|2371301_2371784_-|single-stranded-DNA-binding-protein	unknown	unknown	gnl|CDD|236092
NZ_CP042266.1|WP_146480077.1|2373728_2375321_-|ATP-binding-protein	unknown	unknown	gnl|CDD|366045
NZ_CP042266.1|WP_146484197.1|2371894_2373589_-|ATP-binding-protein	unknown	unknown	gnl|CDD|206743
NZ_CP042266.1|WP_146480078.1|2377148_2378117_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|334462
NZ_CP042266.1|WP_146480081.1|2382363_2383101_+|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|239217
NZ_CP042266.1|WP_146480083.1|2384174_2384450_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|238045
NZ_CP042266.1|WP_146484198.1|2378554_2379484_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|223566
NZ_CP042266.1|WP_146480072.1|2365791_2366493_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP042266.1|WP_146484200.1|2387332_2388025_+|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	1.2e-16	56.4	0.0
NZ_CP042266.1|WP_146484195.1|2364991_2365735_-|helix-turn-helix-domain-containing-protein	casR	cls001593_casR_CAS-I	8.1e-12	39.5	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146480080.1|2380292_2380835_-|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	8.22045e-29
NZ_CP042266.1|WP_146484196.1|2369082_2370543_-|TQXA-domain-containing-protein	gnl|CDD|369823	pfam08341, TED, Thioester domain. This domain is found near the N-terminus of a variety of bacterial surface proteins and pili. This domain contains an unusual covalent ester bond between a conserved cysteine and glutamine residue.	1.15748e-16
NZ_CP042266.1|WP_146484195.1|2364991_2365735_-|helix-turn-helix-domain-containing-protein	gnl|CDD|224332	COG1414, IclR, Transcriptional regulator [Transcription].	8.93348e-70
NZ_CP042266.1|WP_146480074.1|2367080_2368745_-|energy-dependent-translational-throttle-protein-EttA	gnl|CDD|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NZ_CP042266.1|WP_146484200.1|2387332_2388025_+|CRISPR-associated-endoribonuclease-Cas6	gnl|CDD|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	3.83717e-25
NZ_CP042266.1|WP_146480073.1|2366489_2366930_-|acyl-CoA-thioesterase	gnl|CDD|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	1.46515e-29
NZ_CP042266.1|WP_146480071.1|2364499_2364904_+|globin	gnl|CDD|381280	cd14771, TrHb2_Mt-trHbO-like_O, Truncated hemoglobins, group 2 (O); Mycobacterium tuberculosis hemoglobin O like. The M- and S families exhibit the canonical secondary structure of hemoglobins, a 3-over-3 alpha-helical sandwich structure (3/3 Mb-fold), built by eight alpha-helical segments. Truncated hemoglobins (TrHbs, 2/2Hb, or 2/2 globins) or the T family globins adopt a 2-on-2 alpha-helical sandwich structure, resulting from extensive and complex modifications of the canonical 3-on-3 alpha-helical sandwich that are distributed throughout the whole protein molecule. TrHbs are classified into three main groups based on their structural properties and named after Mycobacterium sp. genes glbN, glbO, and glbP: TrHb1s (N), TrHb2s (O) and TrHb3s (P). This group includes a Mycobacterium tuberculosis TrHb2, Mt-trHbO, encoded by the Mycobacterium tuberculosis glbO gene, which is expressed throughout the Mycobacterium growth phase. It also includes a TrHb2 from the thermophilic Thermobifida fusca ( Tf-trHb) which has a high thermostability and at the optimal growth temperature for Thermobifida fusca (between 55 and 60 degrees C ), it is capable of efficient O2 binding and release. Tf-trHb shares a relatively slow rate of oxygen binding with Mt-trHbO.	9.16839e-65
NZ_CP042266.1|WP_146480079.1|2379497_2380067_-|isochorismatase-family-protein	gnl|CDD|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	1.08135e-34
NZ_CP042266.1|WP_146480076.1|2371301_2371784_-|single-stranded-DNA-binding-protein	gnl|CDD|236092	PRK07772, PRK07772, single-stranded DNA-binding protein; Provisional.	4.69792e-19
NZ_CP042266.1|WP_146480077.1|2373728_2375321_-|ATP-binding-protein	gnl|CDD|366045	pfam00350, Dynamin_N, Dynamin family.	1.12067e-07
NZ_CP042266.1|WP_146484197.1|2371894_2373589_-|ATP-binding-protein	gnl|CDD|206743	cd11383, YfjP, YfjP GTPase. The Era (E. coli Ras-like protein)-like YfjP subfamily includes several uncharacterized bacterial GTPases that are similar to Era. They generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs), to the exclusion of other GTPases. Era is characterized by a distinct derivative of the KH domain (the pseudo-KH domain) which is located C-terminal to the GTPase domain.	8.5685e-36
NZ_CP042266.1|WP_146480078.1|2377148_2378117_-|FAD-dependent-oxidoreductase	gnl|CDD|334462	pfam01266, DAO, FAD dependent oxidoreductase. This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.	2.63512e-20
NZ_CP042266.1|WP_146480081.1|2382363_2383101_+|NUDIX-domain-containing-protein	gnl|CDD|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	2.66357e-16
NZ_CP042266.1|WP_146480083.1|2384174_2384450_-|helix-turn-helix-domain-containing-protein	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.13118e-12
NZ_CP042266.1|WP_146484198.1|2378554_2379484_-|FAD-dependent-oxidoreductase	gnl|CDD|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	3.42063e-16

Protein sequences

>NZ_CP042266.1|WP_146480077.1|2373728_2375321_-|ATP-binding-protein
MVTLDARPQLINALTALRDRVAAVRLPLPLAGAPRARQTREELLAQLDDYLVPRLKDPGAPLLAVVGGSTGAGKSTLVNSLVGRRVSEAGVLRPTTRTPVLVCHPDDHHWFSGTRVLPRLTRVWLPHQEENEGAPAAGRAELRVEKASGLPRGLALLDAPDIDSLVVENRLLAAELICAADVWVMVTTASRYADAVPWHLLRTAKEYDATLITVLDRVPHQVVDEVSRQYAALLTKAGLGDVPRFTIPELPESAGGGSGLLPGTAVAPLYAWLAHRVEDPAARQQALGRTATGVIDSLRARMPELAAAVAGQYAATVRLMGTVEEAYERERVRLDKQLAAGAVLAGDARTRWRGFPRDSTAGELLDALTGSLSALVQCAVAAADERVRDTWRRDPAAAGIAAARPDPEAAERLGIAVRRWRRELEELADEEVRDVDRTPAPDPETVAALVAAALLGGRRARSAGERLAERIGARTALRLRDRGAELLGAAIGSVLDGERRRRIAPLDALDVSPEPQAELIAALSVLQKVR
>NZ_CP042266.1|WP_146484197.1|2371894_2373589_-|ATP-binding-protein
MTEVEYGGGLRHRLDALRELVGLSRTRLDDDTLTEAGRVLGEAATRQRLSSRHTVVAIAGATGSGKSTLFNALAQVPLSETGLRRPTTSAPIACAWSEGAAGLLDRLAIPPRLRRRPLAGGAEELSGLVLVDLPDHDSAMRKHRDQVDRVLALVDAVIWVVDPEKYADAALHERYLRPLAGHAEVTFVVLNQVDRLPADAADQVLDDLRRLLDEDGMALGEHGDPGATVLPISALTGVGLGELRELLGTFVRERTAAARRLSADVDAAAHGLRGAYVATGRTGLDERAREEFADRLAEAVGADAAGEAAEREWRRHAGRACGTPWLRLWRWYERKRVPGAARPADSIPAEEELTARQRVEHAVRTVADEAASGLPAPWSQAVREAAVRGSEGLPEALDELAAREAAETGKRPLRPAWWPAAVLAQASMTLVQIYGGLWLVGQIVGVFPPGLVYPALLMLAGIVGGPLVEWACTAAVRGPARRYGQDARRRLREAAAGCGRAMVLDPVAGELMRYREVRERYATVAGGTRTALGGSRGAGGGRGGRGAGDGGVVLGVTGFSPRHR
>NZ_CP042266.1|WP_146480076.1|2371301_2371784_-|single-stranded-DNA-binding-protein
MSETTVTLVGNAATAVEYRETGNGPVARFRMAVTPRRWDRLRSVWTDGPTSFYTVFAWRGLAANVSGSVSVGDPLMVHGRLRVRELDRRMDEGGGTGPGGVREAGPEPGRAGDGGRRVFVDIDAIAVGHDLNRGTSAFRRAVRSVVGAADAGPEAAAAVA
>NZ_CP042266.1|WP_146484196.1|2369082_2370543_-|TQXA-domain-containing-protein
MSAARGRGRSTARRAAAAAVVTGLVATGALTGAGAAAATDGVQHMGGAVATLSGLKVYDTALLHSKGDEKPFRMPAGLFELTGGGGGTLKTYCIDLHNPTEDGTKYQETPWSESVLNKNENAGKIRWILQNSFPQVDDLTALAAKAGAKQLTEKTAAAGTQVAIWRYSDKANVTAADDNAERLADYLEKEAQNLEEPKASLTFAPLAVSGKPGTRIGPVTVTTNAARAALKLSPDAAGVGVKVVDEAGKPLDNAVNNQKVFFEVPADAPDGTAKLTASATTTVPVGRAFTPLVGTSQTMILAGSSNSDVTAEATASWARTGPVPAVTFKENCDKGGVDVTATNKGDSPFTFTLAGAEHTVPAGGSKTVTVPVDEDQAYDITITGPDGFKENFKGVLDCKPAGEPTPKPSSEPTPNTAGGSSTGGSTAGTTGSTTTGSTTGSSTGGDLAATGGSSATPMIAGIAIALVALGGGAVFFLRKKKAAAGE
>NZ_CP042266.1|WP_146480075.1|2368731_2369082_+|hypothetical-protein
MYSAKRNRPADKWVGRDTPHLAVPRSRGENRRPPAVRPRPRAARPARAPVLSPGAPEARPGGPRGRVALPGRAAPVRRRPRGAGRRLGAVGPWGRSGARFFTGPVRIGADSLRAQG
>NZ_CP042266.1|WP_146480074.1|2367080_2368745_-|energy-dependent-translational-throttle-protein-EttA
MAEYIYTMRKTRKAHGDKVILDDVTLSFLPGAKIGVVGPNGAGKSTVLKIMAGLEQPSNGDAFLSPGYTVGILLQEPPLDESKTVLQNVEDGVAEIKGKLNRFNEIAEQMATEYTDELMEEMGKLQEDLDHANAWDLDAQLEQAMDALGCPPGDWAVTNLSGGEKRRVALCKLLLEAPDLLLLDEPTNHLDAESVQWLEQHLAKYAGTVVAITHDRYFLDNVAGWILELDRGRAIGYEGNYSTYLETKQTRLKVEGQKDAKRAKRLKEELEWVRSNAKGRQAKSKARLARYEEMAAEADKMRKLDFEEIQIPPGPRLGSVVVEVNNLSKGFGEKLLIDDLSFTLPRNGIVGVIGPNGAGKTTLFKMLQGFEEPDSGTIKVGETVKISYVDQSRSNIDPKKTLWAVVSDELDYINVGQVEMPSRAYVSAFGFKGPDQQKPAGVLSGGERNRLNLALTLKQGGNLLLLDEPTNDLDVETLSSLENALLEFPGCAVVVSHDRWFLDRVATHILAYEGESKWFWFEGNFETYEKNKVERLGADAARPHRATYKKLTRG
>NZ_CP042266.1|WP_146480073.1|2366489_2366930_-|acyl-CoA-thioesterase
MARHIYPCPLRWSDMDAFGHVNNVVFLRYLEEARIDFMFRLRPRDGSPSFSGGSVVARHEIDYVRPLVHRHEPVIVESWVTRIGAASLTISYEVKDAEGASQVYVRASTVVVPYDLEAGRPRRISAEERSHLQQYLEEADEAALVA
>NZ_CP042266.1|WP_146480072.1|2365791_2366493_-|hypothetical-protein
MRVPVQSLSLADTREADDLTAFLARLLHYDRAAAVRVQAGDPDGRPQPHLAVFGRPPSFEVLAIRTTRLGSPVALDTTVSAGELLDCVDGSGFTLPAAVTGPPWTGVLPPRGGWSELPGLPGVAEMRAAVTAAVAEFRRRDEQLPPEVRNRAERDRIGREIWSRELPGVRLPLRAVHAAHSLGFLRPGAPVALLAAPGSWLRLRTPFGSVALRASGPGGPGLGALSLTPTRSG
>NZ_CP042266.1|WP_146484195.1|2364991_2365735_-|helix-turn-helix-domain-containing-protein
MQSVDRAVSVLEILARHGEAGVTEIADELGVHKSTAFRLLGALENRGLVTQARERGKYSLGAGLLRLAGAAAGRLDITQESAPLCRALADEVGDTVNVAVLDDDAAVNVAQARGAASVTSYNWIGRRTPLHATSSGKVLLAHAPAAVRERVLAAAPTAFTPHTVTAPDRLARLLDETVERGYAVAVEELETGLNAVAAPVRCHDGTVTGALSVSGPAYRLKAELLPEIAQRAVAVAAELSRRLGYGG
>NZ_CP042266.1|WP_146480071.1|2364499_2364904_+|globin
MNEIPRGTLQEQTFYEQVGGEPVFRRLVHRFYEGVADDPLLRPMYPEEDLGPAEERFALFLMQYWGGPRTYSENRGHPRLRMRHAPFRVDRAAHDAWLRHMRVAVEELELAPEHETQLWNYLTYAAASMINSEG
>NZ_CP042266.1|WP_146480078.1|2377148_2378117_-|FAD-dependent-oxidoreductase
MTAGERVVVAGAGVAGLTTAVVLAEVGLPVSVIAEQVPGVTSLAAGAMWGPYLVEPKEKVARWGQRSLEIFRELAEDPTTGVRLTSGIEASRTAGAPPDWATSLPGFRPCGSAELPVGFTAGYRFTVPLIDMPTYLDYLLRRLDSVGGTVERRRLASFADTGPSPVIVNCTGLGAQDLVPDPGLRAIRGQHVVVTNPGLTEFFSEDTGLSPDLLCFYPHGDTVVLGGTAIDGEGDLAPDEKAAAGILARCAEVEPRLAEAHVVEHRIGARPTRATVRVEAEQQEDGTVVVHNYGHGGAGITLSWGCAEEVARLVTAGEGARR
>NZ_CP042266.1|WP_146484198.1|2378554_2379484_-|FAD-dependent-oxidoreductase
MPSHPDSSVGYDTDLIVIGGGPAGCAAARMAASVGMRSVVIEPDRLCRNLYRISALNNALGGYTSGLELADAMTAELKAMELCRLELGRRVTELRAADDRVTVTLDDGRRLVAPYAVVATGVGPLQPGDVPWIVAPEGLFLPPLWQAAADDAEGRTLLVLGGDRPIGTFLRAHPATETRLLVVYPEADVYKVEEVRDDPRVTLLPVEHLTLRPGHRTTVAAEAMSADGTRRNLSADAAYLSIGNVPTAPPGDLLRGSDGYCPPTDQHPRVIVAGDLRSVRYQRIMTALGSGAEAALQAYYAARKLHMRE
>NZ_CP042266.1|WP_146480079.1|2379497_2380067_-|isochorismatase-family-protein
MDIGNAALVVIDMQNGFVNHHSRQAVPTVTDLVARWSAAGRPVLFTRYFNYPDSPYERFFQWRRLRDSPETDLVPELAEPAARAHAVLDKTGYTLFTPEATDLIRQAGWTDLVFCGIATESCVLKSAVDAFEHGYAPWIVTDACVSDAGPDVHDAGLVVARRLIGSGQLVAMDALVQRITAYAGTVVLE
>NZ_CP042266.1|WP_146480080.1|2380292_2380835_-|GNAT-family-N-acetyltransferase
MRLGSRLALRELEPGDVEAVFAIYGSPEATRHLSFQPRTRDQVAEIVEQSIMSAAADPRTEYAVAVEQQGGRLVGFGRLAIDPHQQRGATFGFALRPDVWGQGYGVETVQLLLGLGFETLGLHRIWGARSPLNEASAATMHRAGMVEEGRIREHIQKAGEWRDSIVHAMLDREWQQVSAS
>NZ_CP042266.1|WP_146484199.1|2380845_2382171_-|hypothetical-protein
MFFRYLLEEQGIRNHQTFLPPYREAAARLGLTGVDPAPKTFEGWLYNGRRPQTVFCRVIVEMLGYSIDDLWTEVPDDGPRTAFVPLTQRALPGASADSGMALTEMTRTGHMAVRRAREFLLGKERESIGDDTLGLLDDEMARLVAAYPSQPLSTLWPDLLETQEQVFRLLEGGRARPSQLRDLNLKAAVLSFLVAKGLHDMSEPHQAMTMTRVAASCARDAEHPALSAMTDGLMSLIAYWTGRAEDAYHYASKGAVTAAGTTGTAGLWLLGLQARAAAALGNAEAVRTATSVATSRRDHVIPDDLDRLGGILTYTNAKQTYYEVEAAALLGHSSPHLVAQAEDAVTALTDPALTAWAFGDLAGARCNLAIVRLGGGDIDGAAEAMRPTLDLPAAYRTSGIAVSARRVHGAVLASAARDATVARDLRAEIESFPVSRAAIGG
>NZ_CP042266.1|WP_146480081.1|2382363_2383101_+|NUDIX-domain-containing-protein
MTQAQDPLLAPVAAAVISLDSHVLLVRRRHTEGTLEWQLPAGKLRSTECPRQAAVREARQETGVLACAVKVLGERVHPDTGCLITYVACNYVSGEPYAAAPDEVTSAQWIPHDQIPRYIPAGLWLPVVRHLRTTAATVDGAVDMQLLTADVGLAREMAATVLSAERAAALQERLRGYITALADPSQEYGEGLHGQYQEVVLDTVRYAVRVVEDPAMEGADPTATLTRLAGLVTTLGTYVTLGSPR
>NZ_CP042266.1|WP_146480082.1|2383918_2384110_+|hypothetical-protein
MPRFAGAQECMKCGHAIDEADAVPLEVDSASGGHPAMWGHRQCIPPWPPTPGAVAPPADRLAR
>NZ_CP042266.1|WP_146480083.1|2384174_2384450_-|helix-turn-helix-domain-containing-protein
MPRVPPPDPRLLARRRRIGRRMFAARTHANLTQQWLAEAAGMDRSDYQRIEYGIVSPRLDTLLTLADALGVPLSELVREDDDRPEVPGSGS
>NZ_CP042266.1|WP_146484200.1|2387332_2388025_+|CRISPR-associated-endoribonuclease-Cas6
MRVKVDVQADRRVLAWNDIHGPARGVVYGLLEEHDPALARSLHDEGWGGHPLKPVGVTSPQFKGAPRKRGVYTTSPQGSVWFGSPVPEIAAALVSALARRAEIVWGDARLRIQGFAVEFGAPAPVAGIVELETATPVVLRHEGRELLPGDAHYIERLEHNLTHKADILGLPAPRGLRVLEAGPRRRFTVRGAPRIGAQVRVAMEADPRFVDAIRSWGLGLDTVQGFGWIR
>NZ_CP042266.1|WP_146480084.1|2388012_2389431_+|hypothetical-protein
MDPVSGGALTATGHPLQRAGTWAVTVIAEKERPEQVTAEDLDGVARSVLADAVHSAVVAKTDAAYDWWKVLFALYPNSKPTHAGRSRDQALLMEALEPMFAPDDGPQIPSPCTFCGTSASVLWAKSMLPLFDTNKALNSLPPGMRGWPVCRGCRIAMWALPYGAWVTAGSATVLSCETPAAEYEFAVRNVRRARRIAHIGFAGLGTGARPELVALRALRAVDGGLSATTLWSFKNDNQDPWLRVTRTRRAVPRFLATVDGNRALHRGWRLLELALTQRDREGRISVDGAGEAARLVFEAEDGRSRSLVSQVHRLLWDTDRWTGGDRTALTRLAFRYEKEVHGMEPDLKGVATLIADWIEHGSGSPRGRLAEYRNAGLSGYRLGQLLYQAGYRLKLDGRKVEVDPAAWQPLIGKRSRAWEHRMLLGAEVLRVLGERGIEVAEPPEDPQERKRVEALLEQPVLAADDEYYFGGA

Crispr_ID: NZ_CP042266_6

• CRISPR_ID: NZ_CP042266_6
• CRISPR_location: 2385360-2386831
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 22 spacers
• Cas_protein_info: cas6,cas7,cas5,cas3,cas4,cas1,cas2

Consensus repeat of NZ_CP042266_6

Consensus_repeat	Method
GTCGTCATCAACCCAGGAGGGTTCGCAAC	PILER-CR
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CRISPRCasFinder
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CRT

spacers of NZ_CP042266_6

>6.1|2385389|37|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
CGCCGCGGCTGGCCGTGGTCGCGGCGGCTCGGACTAG
>6.2|2385455|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GAGTACGTGGCGGTGGCGGCGAGTGCCCCGATCTCG
>6.3|2385520|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
CCGGGCCGGGACTCCGGGGGCCGGGAGGTCAATCCG
>6.4|2385585|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GGCCCCGGCCCGTGACGGGGGCACAGGCCGGGGCCG
>6.5|2385650|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
CCGCAGCCGCGGGGAGCGGCAACCGCGTCCTCCCCG
>6.6|2385715|37|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GAGGTGACGGGCGGCGGGGTGGCTGTGCGGTCTTCGT
>6.7|2385781|40|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GCGTTCACGGGGCGGATCAGGGACGCGGGGTCGAGGTCGG
>6.8|2385850|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
AGGGCAGAGGCGATGAGGAGCAGGAGCGATAGGGGT
>6.9|2385915|37|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
TGCCACTCGGGCTCCTCGCCGTCCTCGAACGGTTCGA
>6.10|2385981|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
AAGACGATGAGCCCGTTGCACAGGACCGCCCAGCCC
>6.11|2386046|39|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
ACTGCCGCGACGATGGCTGAGAGCTGCTTAGGGGTGGGC
>6.12|2386114|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GGCCGGCTGCTCCGGCTCCCCTCACCGCCCGCCCGG
>6.13|2386179|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GGGTGCAGGGCAGCGGGGCCGGTCCGATGAACACCT
>6.14|2386244|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
CGGCTGCGACGAGGTCGACCGCCCATCCCCGGGCCG
>6.15|2386309|35|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GCTGACCTTCTGGTGGCCCTGCTGGATGATCCGGC
>6.16|2386373|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
TTCAGGGTCAGACGGGCCTGCGGCCGGTCGGAGGTC
>6.17|2386438|35|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
AGGATCTCGGCGGAGGTCCAGCGCCGCGCGTCGGG
>6.18|2386502|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
ACGCGGGCGGCGCTGACGCCTCCGAGGAGACGCCCG
>6.19|2386567|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GCCCCTCCTTCGGTGAACCACGGCACGGAATCCCAC
>6.20|2386632|40|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
ACCCACCGCAGAGAGCGCTGCATCAGGGCGGCGAACTCCT
>6.21|2386701|37|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
ACCACCCGGGCCCCCGCGTACGACACCGGCGTCCCCG
>6.22|2386767|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
CGGGACCCCAAAGGCAAGCGCCGCTCGGTCGGTGAC

CRISPR arrays and Neighbor proteins around NZ_CP042266_6

CRISPR arrays

The CRISPR arrays of NZ_CP042266_6

>merge|NZ_CP042266|6|2385360-2386831|PILER-CR,CRISPRCasFinder,CRT
GTCGTCATCAACCCAGGAGGGTTCGCAACCGCCGCGGCTGGCCGTGGTCGCGGCGGCTCGGACTAGGTCGTCATCAACCCAGGAGGGTTCGCAACGAGTACGTGGCGGTGGCGGCGAGTGCCCCGATCTCGGTCGTCATCAACCCAGGAGGGTTCGCAACCCGGGCCGGGACTCCGGGGGCCGGGAGGTCAATCCGGTCGTCATCAACCCAGGAGGGTTCGCAACGGCCCCGGCCCGTGACGGGGGCACAGGCCGGGGCCGGTCGTCATCAACCCAGGAGGGTTCGCAACCCGCAGCCGCGGGGAGCGGCAACCGCGTCCTCCCCGGTCGTCATCAACCCAGGAGGGTTCGCAACGAGGTGACGGGCGGCGGGGTGGCTGTGCGGTCTTCGTGTCGTCATCAACCCAGGAGGGTTCGCAACGCGTTCACGGGGCGGATCAGGGACGCGGGGTCGAGGTCGGGTCGTCATCAACCCAGGAGGGTTCGCAACAGGGCAGAGGCGATGAGGAGCAGGAGCGATAGGGGTGTCGTCATCAACCCAGGAGGGTTCGCAACTGCCACTCGGGCTCCTCGCCGTCCTCGAACGGTTCGAGTCGTCATCAACCCAGGAGGGTTCGCAACAAGACGATGAGCCCGTTGCACAGGACCGCCCAGCCCGTCGTCATCAACCCAGGAGGGTTCGCAACACTGCCGCGACGATGGCTGAGAGCTGCTTAGGGGTGGGCGTCGTCATCAACCCAGGAGGGTTCGCAACGGCCGGCTGCTCCGGCTCCCCTCACCGCCCGCCCGGGTCGTCATCAACCCAGGAGGGTTCGCAACGGGTGCAGGGCAGCGGGGCCGGTCCGATGAACACCTGTCGTCATCAACCCAGGAGGGTTCGCAACCGGCTGCGACGAGGTCGACCGCCCATCCCCGGGCCGGTCGTCATCAACCCAGGAGGGTTCGCAACGCTGACCTTCTGGTGGCCCTGCTGGATGATCCGGCGTCGTCATCAACCCAGGAGGGTTCGCAACTTCAGGGTCAGACGGGCCTGCGGCCGGTCGGAGGTCGTCGTCATCAACCCAGGAGGGTTCGCAACAGGATCTCGGCGGAGGTCCAGCGCCGCGCGTCGGGGTCGTCATCAACCCAGGAGGGTTCGCAACACGCGGGCGGCGCTGACGCCTCCGAGGAGACGCCCGGTCGTCATCAACCCAGGAGGGTTCGCAACGCCCCTCCTTCGGTGAACCACGGCACGGAATCCCACGTCGTCATCAACCCAGGAGGGTTCGCAACACCCACCGCAGAGAGCGCTGCATCAGGGCGGCGAACTCCTGTCGTCATCAACCCAGGAGGATTCGCAACACCACCCGGGCCCCCGCGTACGACACCGGCGTCCCCGGTCGTCATCAACCCAGGAGGGTTCGCAACCGGGACCCCAAAGGCAAGCGCCGCTCGGTCGGTGACGTCGTCATCAACCCAGGAGGGTTCGCAAC

>NZ_CP042266|6|4|2385360-2386831|PILER-CR
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CGCCGCGGCTGGCCGTGGTCGCGGCGGCTCGGACTAG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GAGTACGTGGCGGTGGCGGCGAGTGCCCCGATCTCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CCGGGCCGGGACTCCGGGGGCCGGGAGGTCAATCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GGCCCCGGCCCGTGACGGGGGCACAGGCCGGGGCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CCGCAGCCGCGGGGAGCGGCAACCGCGTCCTCCCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GAGGTGACGGGCGGCGGGGTGGCTGTGCGGTCTTCGT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCGTTCACGGGGCGGATCAGGGACGCGGGGTCGAGGTCGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AGGGCAGAGGCGATGAGGAGCAGGAGCGATAGGGGT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	TGCCACTCGGGCTCCTCGCCGTCCTCGAACGGTTCGA
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AAGACGATGAGCCCGTTGCACAGGACCGCCCAGCCC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ACTGCCGCGACGATGGCTGAGAGCTGCTTAGGGGTGGGC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GGCCGGCTGCTCCGGCTCCCCTCACCGCCCGCCCGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GGGTGCAGGGCAGCGGGGCCGGTCCGATGAACACCT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CGGCTGCGACGAGGTCGACCGCCCATCCCCGGGCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCTGACCTTCTGGTGGCCCTGCTGGATGATCCGGC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	TTCAGGGTCAGACGGGCCTGCGGCCGGTCGGAGGTC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AGGATCTCGGCGGAGGTCCAGCGCCGCGCGTCGGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ACGCGGGCGGCGCTGACGCCTCCGAGGAGACGCCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCCCCTCCTTCGGTGAACCACGGCACGGAATCCCAC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ACCCACCGCAGAGAGCGCTGCATCAGGGCGGCGAACTCCT
GTCGTCATCAACCCAGGAGGATTCGCAAC	ACCACCCGGGCCCCCGCGTACGACACCGGCGTCCCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CGGGACCCCAAAGGCAAGCGCCGCTCGGTCGGTGAC
GTCGTCATCAACCCAGGAGGGTTCGCAAC

>NZ_CP042266|6|6|2385360-2386831|CRISPRCasFinder
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CGCCGCGGCTGGCCGTGGTCGCGGCGGCTCGGACTAG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GAGTACGTGGCGGTGGCGGCGAGTGCCCCGATCTCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CCGGGCCGGGACTCCGGGGGCCGGGAGGTCAATCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GGCCCCGGCCCGTGACGGGGGCACAGGCCGGGGCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CCGCAGCCGCGGGGAGCGGCAACCGCGTCCTCCCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GAGGTGACGGGCGGCGGGGTGGCTGTGCGGTCTTCGT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCGTTCACGGGGCGGATCAGGGACGCGGGGTCGAGGTCGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AGGGCAGAGGCGATGAGGAGCAGGAGCGATAGGGGT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	TGCCACTCGGGCTCCTCGCCGTCCTCGAACGGTTCGA
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AAGACGATGAGCCCGTTGCACAGGACCGCCCAGCCC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ACTGCCGCGACGATGGCTGAGAGCTGCTTAGGGGTGGGC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GGCCGGCTGCTCCGGCTCCCCTCACCGCCCGCCCGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GGGTGCAGGGCAGCGGGGCCGGTCCGATGAACACCT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CGGCTGCGACGAGGTCGACCGCCCATCCCCGGGCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCTGACCTTCTGGTGGCCCTGCTGGATGATCCGGC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	TTCAGGGTCAGACGGGCCTGCGGCCGGTCGGAGGTC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AGGATCTCGGCGGAGGTCCAGCGCCGCGCGTCGGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ACGCGGGCGGCGCTGACGCCTCCGAGGAGACGCCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCCCCTCCTTCGGTGAACCACGGCACGGAATCCCAC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ACCCACCGCAGAGAGCGCTGCATCAGGGCGGCGAACTCCT
GTCGTCATCAACCCAGGAGGATTCGCAAC	ACCACCCGGGCCCCCGCGTACGACACCGGCGTCCCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CGGGACCCCAAAGGCAAGCGCCGCTCGGTCGGTGAC
GTCGTCATCAACCCAGGAGGGTTCGCAAC

>NZ_CP042266|6|2|2385360-2386831|CRT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CGCCGCGGCTGGCCGTGGTCGCGGCGGCTCGGACTAG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GAGTACGTGGCGGTGGCGGCGAGTGCCCCGATCTCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CCGGGCCGGGACTCCGGGGGCCGGGAGGTCAATCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GGCCCCGGCCCGTGACGGGGGCACAGGCCGGGGCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CCGCAGCCGCGGGGAGCGGCAACCGCGTCCTCCCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GAGGTGACGGGCGGCGGGGTGGCTGTGCGGTCTTCGT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCGTTCACGGGGCGGATCAGGGACGCGGGGTCGAGGTCGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AGGGCAGAGGCGATGAGGAGCAGGAGCGATAGGGGT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	TGCCACTCGGGCTCCTCGCCGTCCTCGAACGGTTCGA
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AAGACGATGAGCCCGTTGCACAGGACCGCCCAGCCC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ACTGCCGCGACGATGGCTGAGAGCTGCTTAGGGGTGGGC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GGCCGGCTGCTCCGGCTCCCCTCACCGCCCGCCCGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GGGTGCAGGGCAGCGGGGCCGGTCCGATGAACACCT
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CGGCTGCGACGAGGTCGACCGCCCATCCCCGGGCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCTGACCTTCTGGTGGCCCTGCTGGATGATCCGGC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	TTCAGGGTCAGACGGGCCTGCGGCCGGTCGGAGGTC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	AGGATCTCGGCGGAGGTCCAGCGCCGCGCGTCGGG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ACGCGGGCGGCGCTGACGCCTCCGAGGAGACGCCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	GCCCCTCCTTCGGTGAACCACGGCACGGAATCCCAC
GTCGTCATCAACCCAGGAGGGTTCGCAAC	ACCCACCGCAGAGAGCGCTGCATCAGGGCGGCGAACTCCT
GTCGTCATCAACCCAGGAGGATTCGCAAC	ACCACCCGGGCCCCCGCGTACGACACCGGCGTCCCCG
GTCGTCATCAACCCAGGAGGGTTCGCAAC	CGGGACCCCAAAGGCAAGCGCCGCTCGGTCGGTGAC
GTCGTCATCAACCCAGGAGGGTTCGCAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146480085.1|2389430_2390486_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl|CDD|187818
NZ_CP042266.1|WP_146480080.1|2380292_2380835_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584
NZ_CP042266.1|WP_146480082.1|2383918_2384110_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146480091.1|2397074_2398349_+|copper-binding-protein	unknown	unknown	gnl|CDD|368264
NZ_CP042266.1|WP_146480089.1|2395093_2395357_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP042266.1|WP_146480088.1|2393585_2394107_+|Dna2/Cas4-domain-containing-protein	cas4	pfam01930_cas4_CAS-I	gnl|CDD|366863
NZ_CP042266.1|WP_146484200.1|2387332_2388025_+|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl|CDD|273848
NZ_CP042266.1|WP_146480090.1|2395971_2396655_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146484201.1|2394106_2395087_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl|CDD|274695
NZ_CP042266.1|WP_146484199.1|2380845_2382171_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146480079.1|2379497_2380067_-|isochorismatase-family-protein	unknown	unknown	gnl|CDD|238245
NZ_CP042266.1|WP_146480086.1|2390482_2391181_+|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl|CDD|187824
NZ_CP042266.1|WP_146480077.1|2373728_2375321_-|ATP-binding-protein	unknown	unknown	gnl|CDD|366045
NZ_CP042266.1|WP_146484197.1|2371894_2373589_-|ATP-binding-protein	unknown	unknown	gnl|CDD|206743
NZ_CP042266.1|WP_146480087.1|2391162_2393589_+|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl|CDD|224124
NZ_CP042266.1|WP_146480078.1|2377148_2378117_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|334462
NZ_CP042266.1|WP_146480081.1|2382363_2383101_+|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|239217
NZ_CP042266.1|WP_146480083.1|2384174_2384450_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|238045
NZ_CP042266.1|WP_146484198.1|2378554_2379484_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|223566
NZ_CP042266.1|WP_146480084.1|2388012_2389431_+|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP042266.1|WP_146480085.1|2389430_2390486_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	3.2e-79	261.0	0.0
NZ_CP042266.1|WP_146480086.1|2390482_2391181_+|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	1.3e-17	58.9	2.5
NZ_CP042266.1|WP_146484201.1|2394106_2395087_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	2.1e-97	320.8	0.0
NZ_CP042266.1|WP_146480087.1|2391162_2393589_+|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	4.7e-59	195.0	0.0
NZ_CP042266.1|WP_146480089.1|2395093_2395357_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	5.6e-23	75.7	0.0
NZ_CP042266.1|WP_146484200.1|2387332_2388025_+|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	1.2e-16	56.4	0.0
NZ_CP042266.1|WP_146480088.1|2393585_2394107_+|Dna2/Cas4-domain-containing-protein	cas4	pfam01930_cas4_CAS-I	6.4e-40	131.7	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146480085.1|2389430_2390486_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl|CDD|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	2.52373e-87
NZ_CP042266.1|WP_146480080.1|2380292_2380835_-|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	8.22045e-29
NZ_CP042266.1|WP_146484200.1|2387332_2388025_+|CRISPR-associated-endoribonuclease-Cas6	gnl|CDD|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	3.83717e-25
NZ_CP042266.1|WP_146480091.1|2397074_2398349_+|copper-binding-protein	gnl|CDD|368264	pfam05048, NosD, Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.	2.80223e-11
NZ_CP042266.1|WP_146480089.1|2395093_2395357_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.61051e-25
NZ_CP042266.1|WP_146480088.1|2393585_2394107_+|Dna2/Cas4-domain-containing-protein	gnl|CDD|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.64094e-62
NZ_CP042266.1|WP_146484201.1|2394106_2395087_+|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	3.73321e-133
NZ_CP042266.1|WP_146480079.1|2379497_2380067_-|isochorismatase-family-protein	gnl|CDD|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	1.08135e-34
NZ_CP042266.1|WP_146480086.1|2390482_2391181_+|CRISPR-associated-protein-Cas5	gnl|CDD|187824	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.04152e-14
NZ_CP042266.1|WP_146480077.1|2373728_2375321_-|ATP-binding-protein	gnl|CDD|366045	pfam00350, Dynamin_N, Dynamin family.	1.12067e-07
NZ_CP042266.1|WP_146484197.1|2371894_2373589_-|ATP-binding-protein	gnl|CDD|206743	cd11383, YfjP, YfjP GTPase. The Era (E. coli Ras-like protein)-like YfjP subfamily includes several uncharacterized bacterial GTPases that are similar to Era. They generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs), to the exclusion of other GTPases. Era is characterized by a distinct derivative of the KH domain (the pseudo-KH domain) which is located C-terminal to the GTPase domain.	8.5685e-36
NZ_CP042266.1|WP_146480087.1|2391162_2393589_+|CRISPR-associated-helicase-Cas3'	gnl|CDD|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.80956e-52
NZ_CP042266.1|WP_146480078.1|2377148_2378117_-|FAD-dependent-oxidoreductase	gnl|CDD|334462	pfam01266, DAO, FAD dependent oxidoreductase. This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.	2.63512e-20
NZ_CP042266.1|WP_146480081.1|2382363_2383101_+|NUDIX-domain-containing-protein	gnl|CDD|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	2.66357e-16
NZ_CP042266.1|WP_146480083.1|2384174_2384450_-|helix-turn-helix-domain-containing-protein	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.13118e-12
NZ_CP042266.1|WP_146484198.1|2378554_2379484_-|FAD-dependent-oxidoreductase	gnl|CDD|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	3.42063e-16

Protein sequences

>NZ_CP042266.1|WP_146480083.1|2384174_2384450_-|helix-turn-helix-domain-containing-protein
MPRVPPPDPRLLARRRRIGRRMFAARTHANLTQQWLAEAAGMDRSDYQRIEYGIVSPRLDTLLTLADALGVPLSELVREDDDRPEVPGSGS
>NZ_CP042266.1|WP_146480082.1|2383918_2384110_+|hypothetical-protein
MPRFAGAQECMKCGHAIDEADAVPLEVDSASGGHPAMWGHRQCIPPWPPTPGAVAPPADRLAR
>NZ_CP042266.1|WP_146480081.1|2382363_2383101_+|NUDIX-domain-containing-protein
MTQAQDPLLAPVAAAVISLDSHVLLVRRRHTEGTLEWQLPAGKLRSTECPRQAAVREARQETGVLACAVKVLGERVHPDTGCLITYVACNYVSGEPYAAAPDEVTSAQWIPHDQIPRYIPAGLWLPVVRHLRTTAATVDGAVDMQLLTADVGLAREMAATVLSAERAAALQERLRGYITALADPSQEYGEGLHGQYQEVVLDTVRYAVRVVEDPAMEGADPTATLTRLAGLVTTLGTYVTLGSPR
>NZ_CP042266.1|WP_146484199.1|2380845_2382171_-|hypothetical-protein
MFFRYLLEEQGIRNHQTFLPPYREAAARLGLTGVDPAPKTFEGWLYNGRRPQTVFCRVIVEMLGYSIDDLWTEVPDDGPRTAFVPLTQRALPGASADSGMALTEMTRTGHMAVRRAREFLLGKERESIGDDTLGLLDDEMARLVAAYPSQPLSTLWPDLLETQEQVFRLLEGGRARPSQLRDLNLKAAVLSFLVAKGLHDMSEPHQAMTMTRVAASCARDAEHPALSAMTDGLMSLIAYWTGRAEDAYHYASKGAVTAAGTTGTAGLWLLGLQARAAAALGNAEAVRTATSVATSRRDHVIPDDLDRLGGILTYTNAKQTYYEVEAAALLGHSSPHLVAQAEDAVTALTDPALTAWAFGDLAGARCNLAIVRLGGGDIDGAAEAMRPTLDLPAAYRTSGIAVSARRVHGAVLASAARDATVARDLRAEIESFPVSRAAIGG
>NZ_CP042266.1|WP_146480080.1|2380292_2380835_-|GNAT-family-N-acetyltransferase
MRLGSRLALRELEPGDVEAVFAIYGSPEATRHLSFQPRTRDQVAEIVEQSIMSAAADPRTEYAVAVEQQGGRLVGFGRLAIDPHQQRGATFGFALRPDVWGQGYGVETVQLLLGLGFETLGLHRIWGARSPLNEASAATMHRAGMVEEGRIREHIQKAGEWRDSIVHAMLDREWQQVSAS
>NZ_CP042266.1|WP_146480079.1|2379497_2380067_-|isochorismatase-family-protein
MDIGNAALVVIDMQNGFVNHHSRQAVPTVTDLVARWSAAGRPVLFTRYFNYPDSPYERFFQWRRLRDSPETDLVPELAEPAARAHAVLDKTGYTLFTPEATDLIRQAGWTDLVFCGIATESCVLKSAVDAFEHGYAPWIVTDACVSDAGPDVHDAGLVVARRLIGSGQLVAMDALVQRITAYAGTVVLE
>NZ_CP042266.1|WP_146484198.1|2378554_2379484_-|FAD-dependent-oxidoreductase
MPSHPDSSVGYDTDLIVIGGGPAGCAAARMAASVGMRSVVIEPDRLCRNLYRISALNNALGGYTSGLELADAMTAELKAMELCRLELGRRVTELRAADDRVTVTLDDGRRLVAPYAVVATGVGPLQPGDVPWIVAPEGLFLPPLWQAAADDAEGRTLLVLGGDRPIGTFLRAHPATETRLLVVYPEADVYKVEEVRDDPRVTLLPVEHLTLRPGHRTTVAAEAMSADGTRRNLSADAAYLSIGNVPTAPPGDLLRGSDGYCPPTDQHPRVIVAGDLRSVRYQRIMTALGSGAEAALQAYYAARKLHMRE
>NZ_CP042266.1|WP_146480078.1|2377148_2378117_-|FAD-dependent-oxidoreductase
MTAGERVVVAGAGVAGLTTAVVLAEVGLPVSVIAEQVPGVTSLAAGAMWGPYLVEPKEKVARWGQRSLEIFRELAEDPTTGVRLTSGIEASRTAGAPPDWATSLPGFRPCGSAELPVGFTAGYRFTVPLIDMPTYLDYLLRRLDSVGGTVERRRLASFADTGPSPVIVNCTGLGAQDLVPDPGLRAIRGQHVVVTNPGLTEFFSEDTGLSPDLLCFYPHGDTVVLGGTAIDGEGDLAPDEKAAAGILARCAEVEPRLAEAHVVEHRIGARPTRATVRVEAEQQEDGTVVVHNYGHGGAGITLSWGCAEEVARLVTAGEGARR
>NZ_CP042266.1|WP_146480077.1|2373728_2375321_-|ATP-binding-protein
MVTLDARPQLINALTALRDRVAAVRLPLPLAGAPRARQTREELLAQLDDYLVPRLKDPGAPLLAVVGGSTGAGKSTLVNSLVGRRVSEAGVLRPTTRTPVLVCHPDDHHWFSGTRVLPRLTRVWLPHQEENEGAPAAGRAELRVEKASGLPRGLALLDAPDIDSLVVENRLLAAELICAADVWVMVTTASRYADAVPWHLLRTAKEYDATLITVLDRVPHQVVDEVSRQYAALLTKAGLGDVPRFTIPELPESAGGGSGLLPGTAVAPLYAWLAHRVEDPAARQQALGRTATGVIDSLRARMPELAAAVAGQYAATVRLMGTVEEAYERERVRLDKQLAAGAVLAGDARTRWRGFPRDSTAGELLDALTGSLSALVQCAVAAADERVRDTWRRDPAAAGIAAARPDPEAAERLGIAVRRWRRELEELADEEVRDVDRTPAPDPETVAALVAAALLGGRRARSAGERLAERIGARTALRLRDRGAELLGAAIGSVLDGERRRRIAPLDALDVSPEPQAELIAALSVLQKVR
>NZ_CP042266.1|WP_146484197.1|2371894_2373589_-|ATP-binding-protein
MTEVEYGGGLRHRLDALRELVGLSRTRLDDDTLTEAGRVLGEAATRQRLSSRHTVVAIAGATGSGKSTLFNALAQVPLSETGLRRPTTSAPIACAWSEGAAGLLDRLAIPPRLRRRPLAGGAEELSGLVLVDLPDHDSAMRKHRDQVDRVLALVDAVIWVVDPEKYADAALHERYLRPLAGHAEVTFVVLNQVDRLPADAADQVLDDLRRLLDEDGMALGEHGDPGATVLPISALTGVGLGELRELLGTFVRERTAAARRLSADVDAAAHGLRGAYVATGRTGLDERAREEFADRLAEAVGADAAGEAAEREWRRHAGRACGTPWLRLWRWYERKRVPGAARPADSIPAEEELTARQRVEHAVRTVADEAASGLPAPWSQAVREAAVRGSEGLPEALDELAAREAAETGKRPLRPAWWPAAVLAQASMTLVQIYGGLWLVGQIVGVFPPGLVYPALLMLAGIVGGPLVEWACTAAVRGPARRYGQDARRRLREAAAGCGRAMVLDPVAGELMRYREVRERYATVAGGTRTALGGSRGAGGGRGGRGAGDGGVVLGVTGFSPRHR
>NZ_CP042266.1|WP_146484200.1|2387332_2388025_+|CRISPR-associated-endoribonuclease-Cas6
MRVKVDVQADRRVLAWNDIHGPARGVVYGLLEEHDPALARSLHDEGWGGHPLKPVGVTSPQFKGAPRKRGVYTTSPQGSVWFGSPVPEIAAALVSALARRAEIVWGDARLRIQGFAVEFGAPAPVAGIVELETATPVVLRHEGRELLPGDAHYIERLEHNLTHKADILGLPAPRGLRVLEAGPRRRFTVRGAPRIGAQVRVAMEADPRFVDAIRSWGLGLDTVQGFGWIR
>NZ_CP042266.1|WP_146480084.1|2388012_2389431_+|hypothetical-protein
MDPVSGGALTATGHPLQRAGTWAVTVIAEKERPEQVTAEDLDGVARSVLADAVHSAVVAKTDAAYDWWKVLFALYPNSKPTHAGRSRDQALLMEALEPMFAPDDGPQIPSPCTFCGTSASVLWAKSMLPLFDTNKALNSLPPGMRGWPVCRGCRIAMWALPYGAWVTAGSATVLSCETPAAEYEFAVRNVRRARRIAHIGFAGLGTGARPELVALRALRAVDGGLSATTLWSFKNDNQDPWLRVTRTRRAVPRFLATVDGNRALHRGWRLLELALTQRDREGRISVDGAGEAARLVFEAEDGRSRSLVSQVHRLLWDTDRWTGGDRTALTRLAFRYEKEVHGMEPDLKGVATLIADWIEHGSGSPRGRLAEYRNAGLSGYRLGQLLYQAGYRLKLDGRKVEVDPAAWQPLIGKRSRAWEHRMLLGAEVLRVLGERGIEVAEPPEDPQERKRVEALLEQPVLAADDEYYFGGA
>NZ_CP042266.1|WP_146480085.1|2389430_2390486_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MAYLAGRMLVSVEAGAPNNGKGEDTTARVKYATVRGRRHPYVSAQAVRRWIRDGMVERGVPASPVTRVGKAQNRAQKANTGADPITYADDDLFGYMRAGAKKDDAATTLRDSPFMLGTLMSVAPVHPTEDFGVMSRGVSEPVLHGHEFYTADLAAPFLLDLPRIGTFTLPNSDGVGRPNYLTEEQALQVAQAAALGAGTEMFRGQGAVRLPVEERRHRAALLLEAIAHLSGGAKQALHYGDRVPSLIVMVPFKGGVNPLAHVITGDEDGLVVRGDVLRKELAAWNGEWVSPVRVGWRPGFRDDLREDFEKVCAQEIAEGTVVVNHPRTILLGLASEMREGAWDAWFDDAAE
>NZ_CP042266.1|WP_146480086.1|2390482_2391181_+|CRISPR-associated-protein-Cas5
MTGVSYAEPLPAWRLTFYAPVASFRDPFFPGLTRGLPVPPPSTVRGLLAAATGAPYESLAFGMAAWSEGEGVDAETYHPIDAGGANPAVAGRVRAGKGGMTLRTRPFRADVHLTLWLPGPEGNRVARAFRRPVWGLRLGRLQDLVHLEERVEVALVPATEAVVGSALAPTTGHDVPYATVHRMAASISTDRMTSRWTDYLWCDAPAGRYPVRGAYEDTDYRKKGQALWLLEP
>NZ_CP042266.1|WP_146480087.1|2391162_2393589_+|CRISPR-associated-helicase-Cas3'
MAPGAVTGPPPRRASLDDLRAKSTPAHDRERLTTHSRTVHAAVGPIEDRLGNAGVLADAPAFWSRVRRAALLHDAGKIAEGFQRQVDIGGIPWGERHEVLSLAYVDLLAKATGWTEEDRLMVATLVATHHRALLSGDGGGHGGKPALSRQYNKETDWNEAFGTGVGLGTGETVSQVPRFLHREWLAWLCGYLAADPPTTTPGDPTLAHRARDVLEELLNAWRQPVKPHQGLLAVLAQGALTLADRSGSAHVGLQTHMPLAVDYLARLPYEPHAHQRRAAESSGHLVLVAPTGSGKTEAGLAWAAGQMATMSGLPRVVWTLPYKASLNAIRRRFAGSLLPAPGERKADIGLLHGTVAQTLLTEALEDDCAAGDPDSEPTADQARKARAQANAMRLFTHRLRVATPHQLLSGAVAGPTYSSVLLEQTNALFVLDELHAYEPDTFGRLCAAMRLWERLGSRFAVLSATLADTMIQIIEESVEQPVTVHRAPAGTSPVRHRLVLDERPVDAPESVERLREQLREGHSVLVVANTVARAQDLFEQLAEDAREAKPGDPSAALLLHSRFKNGDRDAIEKALLRRHPERREGDAERRGGLVVATQVVEVSLQLDFDRGAVECAPVEAVAQRAGRVNRRGLHPEGPVEFRVHPAETHKPYSAGAMDASWSALTGLVAEGATALSEQDIDELLRRAYDTVWGREWVDEARRNRDEFAARFLTFTDPFHDRSEFAHALTKVFDSVEVLHHEDKAEYQALTRGKKGDPLLASRLLIPLRLGQLRDFGCTYDPYLKVHISEGVYDNVLGLRPSASQETIL
>NZ_CP042266.1|WP_146480088.1|2393585_2394107_+|Dna2/Cas4-domain-containing-protein
MSPDSGLPADDESAVGGVHIKYLVHCPRQLWLYARGYRPEQRSDLVAFGEVVDDTTFTRRRDVDLGEAKIDWVTTGAVVHETKSSRAPAPGHTAQVRHYCLLLERRGVNVRGGVVHYPLIRRTTDVAWDDDARAEAEDTEAQAQAVIAASTAPDRLLRGKCRGCSYLDYCWGD
>NZ_CP042266.1|WP_146484201.1|2394106_2395087_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MPAVGRTYWLTEPCRIRREDNSVRIERPDGSPVRIPITDIRDLVVFDHVDVNTSALSLLSRNGVTVHILDHYGNHAGHFSPAESMSSATVVRRQVEITADEEQRLAVARSLVLATAENLRWALDTDLLDSALEALKGALPECRSNDAIMGQEGNFRRTAWAVLDSRLPPWLRMNGRTRRPPTNAGNAFVSYLNALVYARVLTALRSTPLHPAIGFLHADTDRRRNTLALDLAEPFKPLFAERLLRRAASQKHLKESDFETDVGRASLSKDGRKKIAALVREELATTVHHRGLKRKVSYEELMHLEALKVVRFCLEGTPYKPFRPWW
>NZ_CP042266.1|WP_146480089.1|2395093_2395357_+|CRISPR-associated-endonuclease-Cas2
MFVILVYDTAVERNPKVLKTCRKYLHWTQRSVFQGELSAAQYRALMAALGTVIDPEYDSIVTYTARSPEMVESATLGVALGGPGDIL
>NZ_CP042266.1|WP_146480090.1|2395971_2396655_-|hypothetical-protein
MSHVPSRLMAALDALDHAFASEAPLPVVGCSYCYSEQDFAALSGPLHLISDDLLSHVASEGPDHWDNPSRLYRRLVPRIVRLLVTDQLHIDEELIASRLLQVEWTTWDTRLTGALSEVWSAWWEDTLHTHPSPVSIRETLSFLTVVTNDIRPWLNIWTATHHPAADAHLADFIDDVLFEWEITDLRMGFYGEYHATPELLPWLLTDIHDRAADARLDDPYLLDPETR
>NZ_CP042266.1|WP_146480091.1|2397074_2398349_+|copper-binding-protein
MIRLSWTISSRSLAVVGAAALFGVAGPVPAAQAAHLSCGQTVTTSVVLHADLLNCPGDGLIVGGSGITIDLNGHTIDGVGLGVGIRNNGFANAVITNGGVAQGRVQQFDHGVQLNAGTTGNIVEKIAVQNNEFTGVGLNGAHTNNRVRNNLIDRQSQKGVAITAASNGNVITDNTITGNQGEGVFVQNSASNRIEGNQISGSGGVGLVLEGSRANSLLTNTVGTSADAAITLRVGSNGNLVQGNSSARSADAGLIVADSSGNRILSNTLQGAGDSGIVLNSAHSNTVNGNDVRGNTGGIELSFSDSNTIHSNNASNTTGDGISLGGSLRNDLQLNQANTNGARGIYVVGDAAAGAGNKLIRNTTNTNKGNGIAVSKAAHTIQANTARGNNGWGIQADPGNVDGGGNLASGNSQAGQCSGVVCTP

Crispr_ID: NZ_CP042266_7

• CRISPR_ID: NZ_CP042266_7
• CRISPR_location: 2395448-2395879
• CRISPR_type: TypeI-E
• Repeat_type: NA
• Spacer_info: 6 spacers
• Cas_protein_info: cas2,cas1,cas4,cas3,cas5,cas7,cas6,cas6e,cse2gr11,cas8e

Consensus repeat of NZ_CP042266_7

Consensus_repeat	Method
GGTCGTCATCAACCCAGGAGGGTTCGCAA	PILER-CR
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	CRISPRCasFinder
GTCGTCATCAACCCAGGAGGGTTCGCAA	CRT

spacers of NZ_CP042266_7

>7.1|2395477|37|NZ_CP042266|PILER-CR
CGCCCCGGATGGCTGGCAGACGAGATCCGCGAGTACC
>7.2|2395543|39|NZ_CP042266|PILER-CR
CTGGGGGTGTCCGCCTCCGGAGTGGCGGCCGGGTCGGGG
>7.3|2395611|44|NZ_CP042266|PILER-CR
CGTGAGCAGCGAGCGGATTCGCGCGACGCTGGACGGCCAGCGAC
>7.4|2395684|35|NZ_CP042266|PILER-CR
CATCGCCCGGACGATCAGCGCCCGCGCATCCGCCC
>7.5|2395748|34|NZ_CP042266|PILER-CR
CAGGTATTCGTCGGCGGCTTGCCGCATGTCCTCG
>7.6|2395478|36|NZ_CP042266|CRISPRCasFinder
GCCCCGGATGGCTGGCAGACGAGATCCGCGAGTACC
>7.7|2395544|38|NZ_CP042266|CRISPRCasFinder
TGGGGGTGTCCGCCTCCGGAGTGGCGGCCGGGTCGGGG
>7.8|2395612|43|NZ_CP042266|CRISPRCasFinder
GTGAGCAGCGAGCGGATTCGCGCGACGCTGGACGGCCAGCGAC
>7.9|2395685|34|NZ_CP042266|CRISPRCasFinder
ATCGCCCGGACGATCAGCGCCCGCGCATCCGCCC
>7.10|2395749|33|NZ_CP042266|CRISPRCasFinder
AGGTATTCGTCGGCGGCTTGCCGCATGTCCTCG
>7.11|2395477|38|NZ_CP042266|CRT
CGCCCCGGATGGCTGGCAGACGAGATCCGCGAGTACCG
>7.12|2395543|40|NZ_CP042266|CRT
CTGGGGGTGTCCGCCTCCGGAGTGGCGGCCGGGTCGGGGG
>7.13|2395611|45|NZ_CP042266|CRT
CGTGAGCAGCGAGCGGATTCGCGCGACGCTGGACGGCCAGCGACG
>7.14|2395684|36|NZ_CP042266|CRT
CATCGCCCGGACGATCAGCGCCCGCGCATCCGCCCC
>7.15|2395748|35|NZ_CP042266|CRT
CAGGTATTCGTCGGCGGCTTGCCGCATGTCCTCGG
>7.16|2395811|41|NZ_CP042266|CRT
ACGCTCCAGGCGCGCGGCAAGGCCGGCGCGCGGCTTCTGTC

CRISPR arrays and Neighbor proteins around NZ_CP042266_7

CRISPR arrays

The CRISPR arrays of NZ_CP042266_7

>merge|NZ_CP042266|7|2395448-2395879|PILER-CR,CRISPRCasFinder,CRT
GGTCGTCATCAACCCAGGAGGGTTCGCAACGCCCCGGATGGCTGGCAGACGAGATCCGCGAGTACCGGTCGTCATCAACCCAGGAGGGTTCGCAACTGGGGGTGTCCGCCTCCGGAGTGGCGGCCGGGTCGGGGGGTCGTCATCAACCCAGGAGGGTTCGCAACGTGAGCAGCGAGCGGATTCGCGCGACGCTGGACGGCCAGCGACGGTCGTCATCAACCCAGGAGGGTTCGCAACATCGCCCGGACGATCAGCGCCCGCGCATCCGCCCCGTCGTCATCAACCCAGGAGGGTTCGCAACAGGTATTCGTCGGCGGCTTGCCGCATGTCCTCGGGTCGCCATCAACCCAGGAGGGTTCGCAAACGCTCCAGGCGCGCGGCAAGGCCGGCGCGCGGCTTCTGTCGTCGTCAACACCCAGGAGGGGTTTCCCG

>NZ_CP042266|7|5|2395448-2395810|PILER-CR
GGTCGTCATCAACCCAGGAGGGTTCGCAA	CGCCCCGGATGGCTGGCAGACGAGATCCGCGAGTACC
GGTCGTCATCAACCCAGGAGGGTTCGCAA	CTGGGGGTGTCCGCCTCCGGAGTGGCGGCCGGGTCGGGG
GGTCGTCATCAACCCAGGAGGGTTCGCAA	CGTGAGCAGCGAGCGGATTCGCGCGACGCTGGACGGCCAGCGAC
GGTCGTCATCAACCCAGGAGGGTTCGCAA	CATCGCCCGGACGATCAGCGCCCGCGCATCCGCCC
CGTCGTCATCAACCCAGGAGGGTTCGCAA	CAGGTATTCGTCGGCGGCTTGCCGCATGTCCTCG
GGTCGCCATCAACCCAGGAGGGTTCGCAA

>NZ_CP042266|7|7|2395448-2395811|CRISPRCasFinder
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	GCCCCGGATGGCTGGCAGACGAGATCCGCGAGTACC
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	TGGGGGTGTCCGCCTCCGGAGTGGCGGCCGGGTCGGGG
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	GTGAGCAGCGAGCGGATTCGCGCGACGCTGGACGGCCAGCGAC
GGTCGTCATCAACCCAGGAGGGTTCGCAAC	ATCGCCCGGACGATCAGCGCCCGCGCATCCGCCC
CGTCGTCATCAACCCAGGAGGGTTCGCAAC	AGGTATTCGTCGGCGGCTTGCCGCATGTCCTCG
GGTCGCCATCAACCCAGGAGGGTTCGCAAA

>NZ_CP042266|7|3|2395449-2395879|CRT
GTCGTCATCAACCCAGGAGGGTTCGCAA	CGCCCCGGATGGCTGGCAGACGAGATCCGCGAGTACCG
GTCGTCATCAACCCAGGAGGGTTCGCAA	CTGGGGGTGTCCGCCTCCGGAGTGGCGGCCGGGTCGGGGG
GTCGTCATCAACCCAGGAGGGTTCGCAA	CGTGAGCAGCGAGCGGATTCGCGCGACGCTGGACGGCCAGCGACG
GTCGTCATCAACCCAGGAGGGTTCGCAA	CATCGCCCGGACGATCAGCGCCCGCGCATCCGCCCC
GTCGTCATCAACCCAGGAGGGTTCGCAA	CAGGTATTCGTCGGCGGCTTGCCGCATGTCCTCGG
GTCGCCATCAACCCAGGAGGGTTCGCAA	ACGCTCCAGGCGCGCGGCAAGGCCGGCGCGCGGCTTCTGTC
GTCGTCAACACCCAGGAGGGGTTTCCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146480092.1|2398416_2399991_-|hypothetical-protein	unknown	unknown	gnl|CDD|379079
NZ_CP042266.1|WP_146480085.1|2389430_2390486_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl|CDD|187818
NZ_CP042266.1|WP_146480093.1|2400373_2402080_+|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl|CDD|129794
NZ_CP042266.1|WP_146484202.1|2401973_2402723_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl|CDD|378050
NZ_CP042266.1|WP_146480097.1|2405563_2407120_-|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl|CDD|378189
NZ_CP042266.1|WP_146484200.1|2387332_2388025_+|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl|CDD|273848
NZ_CP042266.1|WP_146480091.1|2397074_2398349_+|copper-binding-protein	unknown	unknown	gnl|CDD|368264
NZ_CP042266.1|WP_146480089.1|2395093_2395357_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP042266.1|WP_146480088.1|2393585_2394107_+|Dna2/Cas4-domain-containing-protein	cas4	pfam01930_cas4_CAS-I	gnl|CDD|366863
NZ_CP042266.1|WP_146480090.1|2395971_2396655_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146484201.1|2394106_2395087_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl|CDD|274695
NZ_CP042266.1|WP_146480094.1|2402704_2403607_-|CRISPR-associated-protein-Cas5	cas5	cd09756_cas5_CAS-I-E	gnl|CDD|378243
NZ_CP042266.1|WP_146480086.1|2390482_2391181_+|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl|CDD|187824
NZ_CP042266.1|WP_146480096.1|2405009_2405567_-|hypothetical-protein	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl|CDD|378191
NZ_CP042266.1|WP_146480087.1|2391162_2393589_+|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl|CDD|224124
NZ_CP042266.1|WP_146480095.1|2403603_2405013_-|CRISPR-associated-protein	cas7	pfam09344_cas7_CAS-I-E	gnl|CDD|378153
NZ_CP042266.1|WP_146480083.1|2384174_2384450_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|238045
NZ_CP042266.1|WP_146480082.1|2383918_2384110_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146480098.1|2407329_2407509_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146480084.1|2388012_2389431_+|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP042266.1|WP_146480085.1|2389430_2390486_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	3.2e-79	261.0	0.0
NZ_CP042266.1|WP_146480094.1|2402704_2403607_-|CRISPR-associated-protein-Cas5	cas5	cd09756_cas5_CAS-I-E	1.5e-40	133.6	0.8
NZ_CP042266.1|WP_146480097.1|2405563_2407120_-|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	1.3e-40	134.4	0.1
NZ_CP042266.1|WP_146480096.1|2405009_2405567_-|hypothetical-protein	cse2gr11	cd09670_cse2gr11_CAS-I-E	6.6e-13	43.9	0.1
NZ_CP042266.1|WP_146480089.1|2395093_2395357_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	5.6e-23	75.7	0.0
NZ_CP042266.1|WP_146480088.1|2393585_2394107_+|Dna2/Cas4-domain-containing-protein	cas4	pfam01930_cas4_CAS-I	6.4e-40	131.7	0.0
NZ_CP042266.1|WP_146484201.1|2394106_2395087_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	2.1e-97	320.8	0.0
NZ_CP042266.1|WP_146480086.1|2390482_2391181_+|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	1.3e-17	58.9	2.5
NZ_CP042266.1|WP_146480087.1|2391162_2393589_+|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	4.7e-59	195.0	0.0
NZ_CP042266.1|WP_146480095.1|2403603_2405013_-|CRISPR-associated-protein	cas7	pfam09344_cas7_CAS-I-E	4.7e-58	192.2	0.0
NZ_CP042266.1|WP_146484202.1|2401973_2402723_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	7e-33	109.2	0.0
NZ_CP042266.1|WP_146484200.1|2387332_2388025_+|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	1.2e-16	56.4	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146480092.1|2398416_2399991_-|hypothetical-protein	gnl|CDD|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	4.27469e-15
NZ_CP042266.1|WP_146480085.1|2389430_2390486_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl|CDD|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	2.52373e-87
NZ_CP042266.1|WP_146480093.1|2400373_2402080_+|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl|CDD|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.3531e-73
NZ_CP042266.1|WP_146484202.1|2401973_2402723_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl|CDD|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	3.45528e-40
NZ_CP042266.1|WP_146480097.1|2405563_2407120_-|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl|CDD|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	2.0684e-52
NZ_CP042266.1|WP_146480091.1|2397074_2398349_+|copper-binding-protein	gnl|CDD|368264	pfam05048, NosD, Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.	2.80223e-11
NZ_CP042266.1|WP_146480089.1|2395093_2395357_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.61051e-25
NZ_CP042266.1|WP_146480088.1|2393585_2394107_+|Dna2/Cas4-domain-containing-protein	gnl|CDD|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.64094e-62
NZ_CP042266.1|WP_146480095.1|2403603_2405013_-|CRISPR-associated-protein	gnl|CDD|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.86031e-48
NZ_CP042266.1|WP_146484201.1|2394106_2395087_+|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	3.73321e-133
NZ_CP042266.1|WP_146480094.1|2402704_2403607_-|CRISPR-associated-protein-Cas5	gnl|CDD|378243	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum.	2.11957e-26
NZ_CP042266.1|WP_146480086.1|2390482_2391181_+|CRISPR-associated-protein-Cas5	gnl|CDD|187824	cd09693, Cas5_I, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.04152e-14
NZ_CP042266.1|WP_146480096.1|2405009_2405567_-|hypothetical-protein	gnl|CDD|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	6.36845e-11
NZ_CP042266.1|WP_146480087.1|2391162_2393589_+|CRISPR-associated-helicase-Cas3'	gnl|CDD|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.80956e-52
NZ_CP042266.1|WP_146480083.1|2384174_2384450_-|helix-turn-helix-domain-containing-protein	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.13118e-12
NZ_CP042266.1|WP_146484200.1|2387332_2388025_+|CRISPR-associated-endoribonuclease-Cas6	gnl|CDD|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	3.83717e-25

Protein sequences

>NZ_CP042266.1|WP_146480089.1|2395093_2395357_+|CRISPR-associated-endonuclease-Cas2
MFVILVYDTAVERNPKVLKTCRKYLHWTQRSVFQGELSAAQYRALMAALGTVIDPEYDSIVTYTARSPEMVESATLGVALGGPGDIL
>NZ_CP042266.1|WP_146484201.1|2394106_2395087_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MPAVGRTYWLTEPCRIRREDNSVRIERPDGSPVRIPITDIRDLVVFDHVDVNTSALSLLSRNGVTVHILDHYGNHAGHFSPAESMSSATVVRRQVEITADEEQRLAVARSLVLATAENLRWALDTDLLDSALEALKGALPECRSNDAIMGQEGNFRRTAWAVLDSRLPPWLRMNGRTRRPPTNAGNAFVSYLNALVYARVLTALRSTPLHPAIGFLHADTDRRRNTLALDLAEPFKPLFAERLLRRAASQKHLKESDFETDVGRASLSKDGRKKIAALVREELATTVHHRGLKRKVSYEELMHLEALKVVRFCLEGTPYKPFRPWW
>NZ_CP042266.1|WP_146480088.1|2393585_2394107_+|Dna2/Cas4-domain-containing-protein
MSPDSGLPADDESAVGGVHIKYLVHCPRQLWLYARGYRPEQRSDLVAFGEVVDDTTFTRRRDVDLGEAKIDWVTTGAVVHETKSSRAPAPGHTAQVRHYCLLLERRGVNVRGGVVHYPLIRRTTDVAWDDDARAEAEDTEAQAQAVIAASTAPDRLLRGKCRGCSYLDYCWGD
>NZ_CP042266.1|WP_146480087.1|2391162_2393589_+|CRISPR-associated-helicase-Cas3'
MAPGAVTGPPPRRASLDDLRAKSTPAHDRERLTTHSRTVHAAVGPIEDRLGNAGVLADAPAFWSRVRRAALLHDAGKIAEGFQRQVDIGGIPWGERHEVLSLAYVDLLAKATGWTEEDRLMVATLVATHHRALLSGDGGGHGGKPALSRQYNKETDWNEAFGTGVGLGTGETVSQVPRFLHREWLAWLCGYLAADPPTTTPGDPTLAHRARDVLEELLNAWRQPVKPHQGLLAVLAQGALTLADRSGSAHVGLQTHMPLAVDYLARLPYEPHAHQRRAAESSGHLVLVAPTGSGKTEAGLAWAAGQMATMSGLPRVVWTLPYKASLNAIRRRFAGSLLPAPGERKADIGLLHGTVAQTLLTEALEDDCAAGDPDSEPTADQARKARAQANAMRLFTHRLRVATPHQLLSGAVAGPTYSSVLLEQTNALFVLDELHAYEPDTFGRLCAAMRLWERLGSRFAVLSATLADTMIQIIEESVEQPVTVHRAPAGTSPVRHRLVLDERPVDAPESVERLREQLREGHSVLVVANTVARAQDLFEQLAEDAREAKPGDPSAALLLHSRFKNGDRDAIEKALLRRHPERREGDAERRGGLVVATQVVEVSLQLDFDRGAVECAPVEAVAQRAGRVNRRGLHPEGPVEFRVHPAETHKPYSAGAMDASWSALTGLVAEGATALSEQDIDELLRRAYDTVWGREWVDEARRNRDEFAARFLTFTDPFHDRSEFAHALTKVFDSVEVLHHEDKAEYQALTRGKKGDPLLASRLLIPLRLGQLRDFGCTYDPYLKVHISEGVYDNVLGLRPSASQETIL
>NZ_CP042266.1|WP_146480086.1|2390482_2391181_+|CRISPR-associated-protein-Cas5
MTGVSYAEPLPAWRLTFYAPVASFRDPFFPGLTRGLPVPPPSTVRGLLAAATGAPYESLAFGMAAWSEGEGVDAETYHPIDAGGANPAVAGRVRAGKGGMTLRTRPFRADVHLTLWLPGPEGNRVARAFRRPVWGLRLGRLQDLVHLEERVEVALVPATEAVVGSALAPTTGHDVPYATVHRMAASISTDRMTSRWTDYLWCDAPAGRYPVRGAYEDTDYRKKGQALWLLEP
>NZ_CP042266.1|WP_146480085.1|2389430_2390486_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MAYLAGRMLVSVEAGAPNNGKGEDTTARVKYATVRGRRHPYVSAQAVRRWIRDGMVERGVPASPVTRVGKAQNRAQKANTGADPITYADDDLFGYMRAGAKKDDAATTLRDSPFMLGTLMSVAPVHPTEDFGVMSRGVSEPVLHGHEFYTADLAAPFLLDLPRIGTFTLPNSDGVGRPNYLTEEQALQVAQAAALGAGTEMFRGQGAVRLPVEERRHRAALLLEAIAHLSGGAKQALHYGDRVPSLIVMVPFKGGVNPLAHVITGDEDGLVVRGDVLRKELAAWNGEWVSPVRVGWRPGFRDDLREDFEKVCAQEIAEGTVVVNHPRTILLGLASEMREGAWDAWFDDAAE
>NZ_CP042266.1|WP_146480084.1|2388012_2389431_+|hypothetical-protein
MDPVSGGALTATGHPLQRAGTWAVTVIAEKERPEQVTAEDLDGVARSVLADAVHSAVVAKTDAAYDWWKVLFALYPNSKPTHAGRSRDQALLMEALEPMFAPDDGPQIPSPCTFCGTSASVLWAKSMLPLFDTNKALNSLPPGMRGWPVCRGCRIAMWALPYGAWVTAGSATVLSCETPAAEYEFAVRNVRRARRIAHIGFAGLGTGARPELVALRALRAVDGGLSATTLWSFKNDNQDPWLRVTRTRRAVPRFLATVDGNRALHRGWRLLELALTQRDREGRISVDGAGEAARLVFEAEDGRSRSLVSQVHRLLWDTDRWTGGDRTALTRLAFRYEKEVHGMEPDLKGVATLIADWIEHGSGSPRGRLAEYRNAGLSGYRLGQLLYQAGYRLKLDGRKVEVDPAAWQPLIGKRSRAWEHRMLLGAEVLRVLGERGIEVAEPPEDPQERKRVEALLEQPVLAADDEYYFGGA
>NZ_CP042266.1|WP_146484200.1|2387332_2388025_+|CRISPR-associated-endoribonuclease-Cas6
MRVKVDVQADRRVLAWNDIHGPARGVVYGLLEEHDPALARSLHDEGWGGHPLKPVGVTSPQFKGAPRKRGVYTTSPQGSVWFGSPVPEIAAALVSALARRAEIVWGDARLRIQGFAVEFGAPAPVAGIVELETATPVVLRHEGRELLPGDAHYIERLEHNLTHKADILGLPAPRGLRVLEAGPRRRFTVRGAPRIGAQVRVAMEADPRFVDAIRSWGLGLDTVQGFGWIR
>NZ_CP042266.1|WP_146480083.1|2384174_2384450_-|helix-turn-helix-domain-containing-protein
MPRVPPPDPRLLARRRRIGRRMFAARTHANLTQQWLAEAAGMDRSDYQRIEYGIVSPRLDTLLTLADALGVPLSELVREDDDRPEVPGSGS
>NZ_CP042266.1|WP_146480082.1|2383918_2384110_+|hypothetical-protein
MPRFAGAQECMKCGHAIDEADAVPLEVDSASGGHPAMWGHRQCIPPWPPTPGAVAPPADRLAR
>NZ_CP042266.1|WP_146480090.1|2395971_2396655_-|hypothetical-protein
MSHVPSRLMAALDALDHAFASEAPLPVVGCSYCYSEQDFAALSGPLHLISDDLLSHVASEGPDHWDNPSRLYRRLVPRIVRLLVTDQLHIDEELIASRLLQVEWTTWDTRLTGALSEVWSAWWEDTLHTHPSPVSIRETLSFLTVVTNDIRPWLNIWTATHHPAADAHLADFIDDVLFEWEITDLRMGFYGEYHATPELLPWLLTDIHDRAADARLDDPYLLDPETR
>NZ_CP042266.1|WP_146480091.1|2397074_2398349_+|copper-binding-protein
MIRLSWTISSRSLAVVGAAALFGVAGPVPAAQAAHLSCGQTVTTSVVLHADLLNCPGDGLIVGGSGITIDLNGHTIDGVGLGVGIRNNGFANAVITNGGVAQGRVQQFDHGVQLNAGTTGNIVEKIAVQNNEFTGVGLNGAHTNNRVRNNLIDRQSQKGVAITAASNGNVITDNTITGNQGEGVFVQNSASNRIEGNQISGSGGVGLVLEGSRANSLLTNTVGTSADAAITLRVGSNGNLVQGNSSARSADAGLIVADSSGNRILSNTLQGAGDSGIVLNSAHSNTVNGNDVRGNTGGIELSFSDSNTIHSNNASNTTGDGISLGGSLRNDLQLNQANTNGARGIYVVGDAAAGAGNKLIRNTTNTNKGNGIAVSKAAHTIQANTARGNNGWGIQADPGNVDGGGNLASGNSQAGQCSGVVCTP
>NZ_CP042266.1|WP_146480092.1|2398416_2399991_-|hypothetical-protein
MIRTACSNERKVPAVQIAAQIGVFNVRDYGATGNGTTIDTAAMQSAFDAARQAGGGTVLIPAGTYAVDTFLVVYGKTSISAYGATIRSVSTGTGLLRNFATGDNFPVYAGNSGITVEGGIWDGNAAHAGVGTVTGTTNVMSFIHARDITVRDVVIRNISSSHGIEFNAVDGGRILNSRFEGFKDNSAAQDRGFSESVQLDIARLNSSSIGEFDLTTCRNILIQGCYFGPSDRLGAAGRAIGSHTSDDNRSYDNIQIIGCRIEGAAQEGIRAFCWRNCVIADNIITGTGQTAILLAVSAPDQPTKSHSIVVKGNVITDCKTSGIRVMGNTGNRITGVVVSGNTLHNTSGNGIHIADAPGANVSGNHIDTTSSTGIYAVDSDGVTVNGNTILTPGSNGINIAGCTGAMVSGNTVRDTKSNHGIYVGDGTQRSAEVVVSGNTVRMPFTAGIRIAGTAKGCTVSGNRVKGAGPTQYGITLAATVTGTAIVGNDLSGSTWPAGNAIVPSTEPPRVDWSGGTTLPGHNLV
>NZ_CP042266.1|WP_146480093.1|2400373_2402080_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MAASGTTAPHDPPPVGEAGEVGEVGEGLARRRGLALAAPVFGLLIVGLDATILTVALPTLATQLEATTTELQWFTDGYTLPFAGLLLLFGVLGDRIGRRLVLVGGLLLFGIGSAMVMGVDSPEGLILARVVMGAGAAAITPLALSIVPLMFPPEERSRAMAVATAGFALGLPLGPLAGGWLLSNFWWGSIFLINIPVVVVAVAGILLFVPETRDPNAERLDLIGAALSLAGVSAFVYGVIEVPNAGWSDPVVPVTVLGGLALLVALLFRLRRAAHPLFDLGLFRNARFTWSSVAISAVMFILFGVLFVVPQFLQQVQGMDAMATGLHLLPMIGTLIVAAAMGGRLVCRIGTKGIVAAGMVLWAAGLALLATVDADTDFVVTGTALAVMGAALGFTMPTALEAILGSLPAHQVGAGSALANSMRQIGASVGVAVLGSALNSTYRDEMADQLPAALPEQARTVAEDHVAGALQVAERLPVEQGAVLADAARNAFVAGMSAVALICAGLAAVTAVLVVALLPGRAAGTRQEPPSGPVTVRAPARSRTPVHGRFPGSARPRRSPDPSRSECP
>NZ_CP042266.1|WP_146484202.1|2401973_2402723_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MGHRPVSAERPAAPARFVATHTLLTLDTRHPYAAKSLIDAQDMHRTVMSGFRGWVEDGNRDARAQMGILSTWTLDLRAARLLLVVQSQVPGDWSRIPRAALAAAPETLTLDRTFGAGDTVGFRTVVNPVRSRPSGPGASGTSEKTRGVRVAHTRPDYVKSWFARRLQPPGEPPVAPDGLARLGADADPGRLGVRMLPRVSSPAPHKGLRIARAEITGTLTVTDPGTFVGALTRGIGHGRAYGCGLVLVR
>NZ_CP042266.1|WP_146480094.1|2402704_2403607_-|CRISPR-associated-protein-Cas5
MSHVLLVRLAAPLQSWGVASRFLRRDTHTRPTKSGVIGLCAAALGLPRGPDPRAQGAGSAKDGSGDPLAELTPLLFGVRADHPGKPVRDYHTVGAGRYPLRPRDLVTDHRRAAALAPVLESAEGAAFGHHELDDWYGAPKKIAADPRSGTLVSAEPRRNALITERWYLADAAFLVGLQHHDRALLERIAHALEHPARLLWLGRKSCPPSGQIALDVRPGTLADVFASVALLPAFTELPPRTGDDDRPWAWLESRRPVPGTGPVLDQPVHFGAMGPQHAPRWETRIRVTVDPHAPAWDIVP
>NZ_CP042266.1|WP_146480095.1|2403603_2405013_-|CRISPR-associated-protein
MTEAPRSQFLSLHVLETLVAVLPVRDENGSPKSMVYGGVERHMITSQARRRAERVHARNRANAGVGALAGRSTGLRTREWALITARSLETVHGWDRQEAVTTARAVIEAVGLKFGDPAKKTVANLTKVLLFAPADTGTRIAAHVHENADELRSWRDDYLRAQEESAKRTARKSKPKNEPGPGPGPGPEPGSGPEPGPEAGSGPGPGGVPGAPAASLPVLPKHHRDAVLFAIAPRDAIDIALYGRFLAEIADSPNVDGAVQSSHAFTVHEAEQVDDFYAAADDAKLDRKRNALDFLEAADDAGAGMTGYQSLISGTFYRHAVLDRRQLTTNLRAAGMSEGEAAETALAAEKEFVNAFVEAFPEAKKNSTASTGSLPALVLAFEGDRPYNYAAAFQLPVDENPAAAGGEGPAGPAAVRRLLRHHAFVSDRRPDLRTSRVLTYDPQIDAVLGEVSGTPKEVPAVRSAEELTP
>NZ_CP042266.1|WP_146480096.1|2405009_2405567_-|hypothetical-protein
MTERTDPAVAAPGDSERLAAWLAALVRNREYGMLAELRRTRPTSTHIRAGWLGPEEHREVYERVAFLFGVYHQGRPVPSYGSGTLGAAARRIGDGTGRGPDNPGAQRLLARVVASRRVPWRHLQHTITRLRSCEQPPPSWSRLADDLTRWHDRGARIAYGWSVDFHGVRTPSGTGHTTMRKDTRT
>NZ_CP042266.1|WP_146480097.1|2405563_2407120_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MWDPRHRPCVPAVTVDGDIVELSLLEVLRRAEELDSLVCPTPGEGVAVLDYLLAICFAAGVFPRSDEEWHDWVSGEHGLDRAAEWLAHDHDGEWDLFHPERPLGQNSGLAPFLDAHGTGPAQLVLERVGDYSQFFDHHHLEHSEPLPAAEAFRAVLVQHVYGLSGRARLSGKATLGPRITNLAAGRLQGRIRVVVQGRTVGDTLRLNLYPPAHGRPGRFNHSWTSGDFPRRDFLTKPPGRTTSGPADLHSSLGRSILLRPAPVAAADEPAVVERVLIGAGELLALDPGRDLEDAVYTQRSLNGPAKPLWPSPTRALWREAHALYSAAREAETGLFGRLRDITFPRDGDGPPCVLWAVGLVADRTLAVTWTDGYFPYAPSQGEALCRASRRGSAIAEWVARALERAAYAAWKVVYPNPKPSDRPAQQARFDARREFWPAAETPFGLLLDRTVRGRPVPDSLHEYAAELRHTAADFLRHRLDSLPDNAEGMKARARAEQRFHNDLAHPEAPAELRGETDI
>NZ_CP042266.1|WP_146480098.1|2407329_2407509_-|hypothetical-protein
MPVVSVLLQDATVLAAAGATTYTAVLATVALTSVLSRTPDRRRDARATLTILLRRRPPR

Crispr_ID: NZ_CP042266_8

• CRISPR_ID: NZ_CP042266_8
• CRISPR_location: 2448094-2448238
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NZ_CP042266_8

Consensus_repeat	Method
GGACGCGGTGCCGGGGGC	CRT

spacers of NZ_CP042266_8

>8.1|2448112|18|NZ_CP042266|CRT
GGTGCCGGACGCGGTGCC
>8.2|2448148|30|NZ_CP042266|CRT
GGTGCGGGACGCGGTGCCGGGGGCGGTGCG
>8.3|2448196|25|NZ_CP042266|CRT
TCCCGGGGTGGGCGCGGTCGCCGGT

CRISPR arrays and Neighbor proteins around NZ_CP042266_8

CRISPR arrays

The CRISPR arrays of NZ_CP042266_8

>merge|NZ_CP042266|8|2448094-2448238|CRT
GGACGCGGTGCCGGACGCGGTGCCGGACGCGGTGCCGGACGCGGTGCCGGGGGCGGTGCGGGACGCGGTGCCGGGGGCGGTGCGGGACGCGGTGCCGGGGGCTCCCGGGGTGGGCGCGGTCGCCGGTGGCGGCGGTGCCGGGGCC

>NZ_CP042266|8|4|2448094-2448238|CRT
GGACGCGGTGCCGGACGC	GGTGCCGGACGCGGTGCC
GGACGCGGTGCCGGGGGC	GGTGCGGGACGCGGTGCCGGGGGCGGTGCG
GGACGCGGTGCCGGGGGC	TCCCGGGGTGGGCGCGGTCGCCGGT
GGCGGCGGTGCCGGGGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146480113.1|2433234_2436030_-|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|224054
NZ_CP042266.1|WP_146484207.1|2431706_2432324_+|DNA-binding-response-regulator	unknown	unknown	gnl|CDD|197715
NZ_CP042266.1|WP_146480118.1|2447197_2448082_-|deoxyribose-phosphate-aldolase	unknown	unknown	gnl|CDD|188645
NZ_CP042266.1|WP_146484210.1|2456624_2457428_-|TIM-barrel-protein	unknown	unknown	gnl|CDD|224007
NZ_CP042266.1|WP_146480117.1|2446075_2447119_-|5-deoxy-glucuronate-isomerase	unknown	unknown	gnl|CDD|377429
NZ_CP042266.1|WP_146480114.1|2440942_2442508_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|379062
NZ_CP042266.1|WP_146480122.1|2451725_2452037_+|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl|CDD|225328
NZ_CP042266.1|WP_146480112.1|2432371_2433238_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224196
NZ_CP042266.1|WP_146480115.1|2442605_2444108_-|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|143404
NZ_CP042266.1|WP_146480126.1|2458633_2459785_-|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP042266.1|WP_146484208.1|2436530_2440937_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|237057
NZ_CP042266.1|WP_146480121.1|2450574_2450772_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|107201
NZ_CP042266.1|WP_146480116.1|2444186_2446079_-|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)	unknown	unknown	gnl|CDD|275170
NZ_CP042266.1|WP_146480124.1|2454270_2456487_-|ATP-dependent-RecD-like-DNA-helicase	unknown	unknown	gnl|CDD|273632
NZ_CP042266.1|WP_146480120.1|2449380_2450292_+|TIM-barrel-protein	unknown	unknown	gnl|CDD|275172
NZ_CP042266.1|WP_146480111.1|2430538_2431336_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|371922
NZ_CP042266.1|WP_146480127.1|2460086_2461148_+|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_CP042266.1|WP_146480123.1|2452751_2454041_-|citrate-synthase	unknown	unknown	gnl|CDD|180164
NZ_CP042266.1|WP_146480125.1|2457485_2458637_-|DUF993-family-protein	unknown	unknown	gnl|CDD|368783
NZ_CP042266.1|WP_146484209.1|2450969_2451548_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146480113.1|2433234_2436030_-|alpha/beta-fold-hydrolase	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.79964e-82
NZ_CP042266.1|WP_146484207.1|2431706_2432324_+|DNA-binding-response-regulator	gnl|CDD|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	0.0004658
NZ_CP042266.1|WP_146480118.1|2447197_2448082_-|deoxyribose-phosphate-aldolase	gnl|CDD|188645	cd00958, DhnA, Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs). Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.	0.00456942
NZ_CP042266.1|WP_146484210.1|2456624_2457428_-|TIM-barrel-protein	gnl|CDD|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	1.54714e-34
NZ_CP042266.1|WP_146480117.1|2446075_2447119_-|5-deoxy-glucuronate-isomerase	gnl|CDD|377429	pfam04962, KduI, KduI/IolB family. This family includes the 5-keto 4-deoxyuronate isomerase enzyme EC:5.3.1.17 that is involved in pectin degradation. This family aldo includes bacterial Myo-inositol catabolism (IolB) proteins. The Bacillus subtilis inositol operon (iolABCDEFGHIJ) is involved in myo-inositol catabolism. Glucose repression of the iol operon induced by inositol is exerted through catabolite repression mediated by CcpA and the iol induction system mediated by IolR. The exact function of IolB is unknown. Members of this family possess a Cupin like structure.	1.32417e-103
NZ_CP042266.1|WP_146480114.1|2440942_2442508_+|AAA-family-ATPase	gnl|CDD|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	0.00324872
NZ_CP042266.1|WP_146480122.1|2451725_2452037_+|heavy-metal-associated-domain-containing-protein	gnl|CDD|225328	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism].	7.24979e-10
NZ_CP042266.1|WP_146480112.1|2432371_2433238_-|ABC-transporter-permease-subunit	gnl|CDD|224196	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only].	2.0218e-05
NZ_CP042266.1|WP_146480115.1|2442605_2444108_-|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	gnl|CDD|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
NZ_CP042266.1|WP_146480126.1|2458633_2459785_-|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	8.97474e-49
NZ_CP042266.1|WP_146484208.1|2436530_2440937_+|tetratricopeptide-repeat-protein	gnl|CDD|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	8.0548e-11
NZ_CP042266.1|WP_146480121.1|2450574_2450772_+|MarR-family-transcriptional-regulator	gnl|CDD|107201	PHA02519, PHA02519, plasmid partition protein SopA; Reviewed.	0.000262548
NZ_CP042266.1|WP_146480116.1|2444186_2446079_-|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)	gnl|CDD|275170	TIGR04377, 3D-35/4-trihydroxycyclohexane-12-dione_hydrolase, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase. Members of this protein family, 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase (iolD), represent one of eight enzymes in a pathway converting myo-inositol to acetyl-CoA. IolD hydrolyzes the cyclic molecule 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione to yield 5-deoxy-D-glucuronic acid. TPP is a cofactor. [Energy metabolism, Sugars].	0
NZ_CP042266.1|WP_146480124.1|2454270_2456487_-|ATP-dependent-RecD-like-DNA-helicase	gnl|CDD|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP042266.1|WP_146480120.1|2449380_2450292_+|TIM-barrel-protein	gnl|CDD|275172	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase. Members of this family include the enzyme myo-inosose-2 dehydratase, product of the gene iolE, as found in inositol utilization cassettes in many species. [Energy metabolism, Sugars].	2.05267e-43
NZ_CP042266.1|WP_146480111.1|2430538_2431336_+|methyltransferase-domain-containing-protein	gnl|CDD|371922	pfam12147, Methyltransf_20, Putative methyltransferase. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The family shows homology to methyltransferases.	8.29139e-76
NZ_CP042266.1|WP_146480127.1|2460086_2461148_+|LacI-family-DNA-binding-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.24031e-95
NZ_CP042266.1|WP_146480123.1|2452751_2454041_-|citrate-synthase	gnl|CDD|180164	PRK05614, gltA, citrate synthase.	0
NZ_CP042266.1|WP_146480125.1|2457485_2458637_-|DUF993-family-protein	gnl|CDD|368783	pfam06187, DUF993, Protein of unknown function (DUF993). This family consists of several hypothetical bacterial proteins of unknown function.	0
NZ_CP042266.1|WP_146484209.1|2450969_2451548_+|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	9.82931e-32

Protein sequences

>NZ_CP042266.1|WP_146480118.1|2447197_2448082_-|deoxyribose-phosphate-aldolase
MSRVSIAGLTRIRSHRPEAVAEAASRRRRRPGLLGETGRLMIIAADHPARGALAVGDRPLAMANRLDLLERLCLALSRPGVDGVLATADILDDLLLLGALEDRIVIGSMNRGGLAGAAFELDDRFTGHRARDLARLGFDAGKLLLRIDYEDAGSLDTLHATARAVDEMAEHRLPVFVEPFICRRVDGKLRNDLGAEAVTRSIAIASGLAGTSAYTWLKVPVTEDPGDMEAVLETSTLPAVILGGEIGDDQHGAYEKWRTALRLPTVQGLVVGRSLLYPVDGDVAKAVDTAVSLL
>NZ_CP042266.1|WP_146480117.1|2446075_2447119_-|5-deoxy-glucuronate-isomerase
MSSDRTGGRPLERYVPAGSAADGPYALRIDPGDPARPGWEHTGIRVLELPPGGSHSFPAGDAEWIVLPLEGSCTVAADGAFFELLGRENVFSGVTDFAYVPRDSRAQIASGAGGRFALAGAKCERRLPARYGPAPEVPVELRGAGGCSRQVNNFAAAGAFDCDRLIAVEVLTPGGNWSSYPPHKHDEYRPGTESLLEEIYYFEIEGGGLGYQRVSPSRPGGTDVLAEVRGGDAVLIPDGWHGPSIAPPGRDMYYLNVMAGPGPERAWLICDHPDHGWIRGTWPGQPVDPRLPLYEAPPRSPAPETSERPAAPETSERPAAPETPVAPETPPVPEASESPAAPEEGHR
>NZ_CP042266.1|WP_146480116.1|2444186_2446079_-|3D-(3,5/4)-trihydroxycyclohexane-1,2-dione-acylhydrolase-(decyclizing)
MTTRLTVAQALVAFLSRQYTERDGRRHRLIAATWGIFGHGNVAGIGQALVESGTGPDAAMPYYQGRNEQAMVHAAVGYARQSRRLSAHAVTTSVGPGATNLVTGAALATINRLPVLLLPGDVFATRPADPVLQQLETPFAGDVSVNDTLRPVSRYFDRISRPEALIPAALAAMRVLADPAETGAVTLALPQDVQAEAYDWPAEFLAERVWRVARPRPDRRALAEAAHLVGAARRPLVVAGGGVHHAEAEEALRSLADATGIPVATTQAGKGSLPYDHPREVGGIGHTGTATADELARTADLVIGIGTRWSDFTTASATLFQNPAVRFVNINVTSFDAHKMAGLSVVADARSALEELTETLAAAGGYRVPEAYETGYGERKADWERLVDTAYAPEDSGARPTQTQVLGALDALVTADDIVINAAGSLPGDLHKLWRARSADQYHVEYGYSCMGYEIPAAIGVALAAPGRPVWALVGDGTYLMNPTEIVTAVQENVPIKVIIIQNHGYASIGGLSESVGAERFGTAYRHRAPDGTYTGGPLPVDLAANAASLGLRVIRARNVRDLREALAEARWSEVPTGVYVETETADTVSGAPPAQAWWDVPVAETATRPSAIRAREEYERRIATRRRPL
>NZ_CP042266.1|WP_146480115.1|2442605_2444108_-|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase
MTKTVNHWIGGKTVEGASGNWGEVTDPATGAVTTRVALASADEVGVAVAAAKEAFAGWGTSSLAARTAVLFRYRALLDARRDDIAALITAEHGKVHSDALGEVARGLEIVELACGITTQLKGELSTQVSSRVDVAAIRQPLGVVAGITPFNFPAMVPMWMFPLAVACGNTFVLKPSEKDPSAANLLAELASEAGLPDGVLNVVHGDKAAVDALLAHPDVAAVSFVGSTPIARYIHTTASANGKRVQALGGAKNHMLVLPDADLDAAADAAVSAAYGSAGERCMAISAVVALESVADELVDKIRERAEKIVIGPGTDPASEMGPLITRAHRDKVASYVTGAAAQGAEVVLDGTGYTVPGHENGHWIGLSLLDRVSTDSDAYRDEIFGPVLCVLRVATYEDGIALINASPYGNGTAIFTRDGGAARRFQLEVEAGMVGVNVPIPVPVGYHSFGGWKDSLFGDHHIYGNDGVHFYTRGKVVTTRWPDPSEPHAGVDLGFPRNH
>NZ_CP042266.1|WP_146480114.1|2440942_2442508_+|AAA-family-ATPase
MTELPPGISGNPFATVGHPVHGAAHVGRAGPVGILLERVLWQSTAGATAIIGPPRIGKSSLAYHVFMRPDARVSHPQLLPVWMNVRTQAGIQQVFRRLCDDVWDLLSERSADIDARTADAYRRAVEPDLLWGQAQSETQEFLRLVRRRGWRVVLILDEFDAAREVFKSQPGTFQTLRELAYNLDWNIGLVTTSRRELREIVDMADPDESTFAGIFRSVFLTCFDTEELTALTARVPGLPAAGSDRDGDNDGDGDGEDPDAAVARLGELTGGHPYLASVLLDRVCGAARGRPFRLLDELEALAPSLPAEFQYYYRDLQELLRADGRLRALLEVVLGPQLVVTPDDALVLLQQGLVRVQDGAYRAFSEDFQQFLTLIGRQLGHWDSWMTVERRVRDLVESVFEEKYGSDWPDRLREVRPKLAAMLDHCEELRAREQRSFGARGSTRLLDFTYPRDLYDLMASHWDLFGPLLKKDKAYWNERFSLLSKVRNPMVHNRMSVVTAVEQRTFQVYCDEIMELLDGTG
>NZ_CP042266.1|WP_146484208.1|2436530_2440937_+|tetratricopeptide-repeat-protein
MVYLAGGRSSRGRLEAVGADSLVLVTGAGPTLLLATAIEQVGLPTGPGAPGPAPAAPAPPPPPTAPSPPPAPAPVALSAAWSVLAGEFATDPEQARPTAPVFGLDPAFDLGYSEAKKIEGHLNRAKNRLDFASKIGEPARAPAAIRDLATAAGDCDYPPAFHLAALLLLERVDTPSTRRQAEAWMAAAASCGHRYAWDLAVLRLRNGRPREAIPALVEALLLDPADHSDDVLLRLLLALALQEGDAPAAAAALAGAAEEGPGERRVATRAALYLLARLAPERAAPLEPLLASPGPSPDELRRVLAALDPEAADRPLAPPPIPGPGPAAGTPQTYPASQTYPAPQPFAAPAAPRPPEPRTARKPGGEPEKAPATKELQLHVAAARNQLNQGNLDAALKIAENALAGSPGHPELLEIAETVRREKAARPPTAPRTAQSQQARGNRTAYARAQHADTKEKDWPKAEQLYRQALTEDPDNERARRSLAWGLHRFKRSGEALELLRDPHVVVQDTLPHQNMIITILSDTGKWSEAAGLLEDLLKREHSKQTRTGLLKRLIVLYRRLRDPERAKDSARRLLHHGPRNPEFRSLWEEVEKAERSGIWDKIDQLLVKSDWKPEQSGSISPILLLHLEHCEYAGVNPARVQEGTLSEQDVEELDDLIRKLGAQRSADRAAYNLSAARILRDLNQSEDERFHKSLRGFGAAMGDLCTAERRHGDVTRTYYAEAVALGGWDNMGELKVKQFALSYLDPDWPQPASRPAFDQCLLWVLEDQSLHRPLTFGLLSLMANSSDRVRREIVSRTFRVDHTKDILFTQLCTYLGETRPSSAHDVYAELWQEALHKLRQELDTQRQSLQLPLNRSEPLGALAEDQQLLERARDLAPTTPLDIDRLKKVAITLADIHGYLEQPSYLEQERLESKIRTAVRELKGTIETWPTRLSLEYLVPLLTKLDRALAAHFGDVQRAAEPTDLEVTKVLSSYAPSAASTIHVQLSVKNLPRRSPAVDVVLRVLDHTDDYQPVGEPIPVAHSLRDDQAETCIVPLVVTPRAIADQVLTLHYSLEFMVRSDRRIVTDQRTLPLRLNDSQDWKQIDNPYAEGAPVEDEEMFYGRKPLLRILVDSLEQPDAKCVVIYGQKRVGKSTVLHHLQRALKPPVLAAEFSLGGVSTNLTDATLLYKIANAFFRRLEDLADGGMPGLDLPYPVLREFIDSGSPELYFDDYMRDLRRRMQRSETYRDWRLVLLLDEFTILYTAIERGPLPREFMKLWKAMLESKLFSSVVVGNDLMPRFLKAFPNEFQVARQEQVSYLDEESAEALITEPIALEYGGSRYRGDSVQRVVELTARSPYYIQLFCNRLVNHMNTERQSLIGPADVDNVAATLVSGDKALPQGQFDNLLTPGDADVSELSADVVLAVLKGSLSGHRRDLHLDGRKSRELPEGPRVIEDLLRRDVIVRESEDRYRIKVGLFAEWLWHRKA
>NZ_CP042266.1|WP_146480113.1|2433234_2436030_-|alpha/beta-fold-hydrolase
MKIRLPRPRTRGRWLAGATALVALVGGGTWAVAADDPGPAVHREDGMRPMPGAQIDTSYFVAGDREAPRPAVLLGHGFGGSKDDVRKQAERLARDGYAVLTWSARGFGKSTGRIGLNDPAHEVKDVSRLLDWLAARPEVRKDAKGDPRVGIAGASYGGAIALLAAGYDRRVDAIAPAVTYWNLADALFPGGVFKKLWAGMFFSTGSATAPGTAPVPDTEAPGRPPGQGGATGAGCGRFQPALCAMYERVAVAGKPDAEARQLLEARSPSAVGQRITVPTLVVQGQSDSLFPLGQADAMAQRIRANGAPVAVDWISGGHDGGDRESDRIEQRVTSWFDRYLKNDKGAGTGPAFRVSRTGGVDSTDGAARLRGATAKSYPGLGDGPRRIQLTGRPQSFGNPAGGSPPAISAVPGLSGGLGQFSSFGVGLGLDFPGQHARFESAPLDRDLRITGAPTVRLRVTSSTGEAVLFGKVYDVGPDGRSQVLPSQLVAPVRVEGAERGKEIQLTLPAVDHRVDAGHRLRLVLSATDLGYASPAAPADYTVALADSGTAGAGRDPAATGAGGGTAGKGTAAAGTLTVPTAPGIRTQAAGLPWWTWGLPAAAALIAAGLLLTARRRTTAPAPDPALAEVPLEITGLTKRYAGAADRYAVRELSFRVEKGQVLGLLGPNGAGKTTTLRMLMGLIRPDEGEIRVFGHAIRPGAPVLSRVGAFVEGAGFLPHLSGRENLELYWQATGRPAEDARLEEALEIADLGSALARAVRTYSQGMRQRLAIAQAMLGLPDLLILDEPTNGLDPPQIREMREVMIRYAAGGRTVIVSSHLLSEVEQSCTHLVVMDRGRLVQAGPVAEITGGSDTLLITTAAQLSDPVVEKIGALPGIGSARRVDEGLLVQLSGATSTELIAELVRLDVPLTGAGPYRRLEDAFLTLIGGSA
>NZ_CP042266.1|WP_146480112.1|2432371_2433238_-|ABC-transporter-permease-subunit
MSGLAPSTAAAPGYRPRSTLPLRVEAVRQLKRRRTMVMAAVLAALPLILVAAFAIGGSPDGSESGRITLMDTATASSANFAATCLFVSAGFLLVIPVALFHGDTVASEAGWSSLRYLLAAPVPRARLLWSKLAVALAFSAAAIVLLPVIALAVGAVAYGWGPLKLPTGGSLDAAETLPRLGLVVLFICLSQLVTAGLAFWLSTKTDAPLGAVGGAVGLTIVGNVLDAVTALGDWREVLPAHWQFAWIDALQPQLEWGGMIKGAAVSVSYALVLFALSFRAFARKDIVS
>NZ_CP042266.1|WP_146484207.1|2431706_2432324_+|DNA-binding-response-regulator
MRGVTRVRAALASLVGSARHELLSFDDPAAALGQGIPESFLRSGAPGCAPAVRTARVRRIAPRHGLRQLREPWRCLGEARVTESVPFRIIVADRSVAAVPIDLDLHDNGVLLIRDPVVVQALVRTHQAWWEAGEDPVRRARPAGPPPHLRPVLDAIMAGLTDDAAAARLNMSRRTYSRRVGELMAALGTTSRFRAGVEAADRGWI
>NZ_CP042266.1|WP_146480111.1|2430538_2431336_+|methyltransferase-domain-containing-protein
MRKRLKSARWAAMRLLLGSAGRLSEGIRIGYRHGFDSGSMLDYVYVNKARGSLGIGRVIDRCYLNAIGWRAIRARRELLKDVLRKEIADRGGRATVLDIASGPGRYLQDLVEEYPSGAVRVECRDLDPAGLAEGERQARERGLTGITFTRGDALDPAPPADGTAPDVIVVSGLYELLLDDAVIAASVERLRGLLAPGGVLVFTTQTRHPQLEFIARVLPNRDGVLWVMKCRPVELTERWARDAGFSGVASRRETVGLFTVTTARR
>NZ_CP042266.1|WP_146480120.1|2449380_2450292_+|TIM-barrel-protein
MTSHVAPLNRIRVGSAPDSWGVWFPDDPRQVPWRRFLDEVADAGYEWIELGPYGYLPSDPAVLAAETGRRGLKVSAGTVFTGLHHGPAVWDETWAQVSRIAALTEAMGARHLVVIPSFWRDDKTGKVLEDSVLTAQQWRDLTRQTERLGREVRERYGLEIVVHPHADTHIDGAENVARFLDATDPGLVSLCLDTGHYAYCGGDSVKLIETYGERIGYLHLKQVDPEVLAGVVAEGVPFGPAVARGVMCEPPGGVPALEPVLAAAQALGIELFAIVEQDMYPCPPEKPFPIAERTRRFLRSCGV
>NZ_CP042266.1|WP_146480121.1|2450574_2450772_+|MarR-family-transcriptional-regulator
MSDRRLWSYKEIAAHIRVQPDTVRSYRKHGHLPPPDLVEAGKPYWYADTIRAWVANRPGNNRGRR
>NZ_CP042266.1|WP_146484209.1|2450969_2451548_+|GNAT-family-N-acetyltransferase
MTKFTHKPTLHGRKVVLRPFTEADVPVMAAILDDPDVLRFTGSDEDEGGSADESAAAALHTWYTTRNDQNDRLDLAVVDRASDEVVGEVVLHEWDPANRNCRFRTLIGPKGRGRGLGTEATALIVGHGFEHIGLHRIVLSVFAFNPRARRVYEKVGFVAEGVEREVLRRGDGWADATSMSVLAHEWRARQDS
>NZ_CP042266.1|WP_146480122.1|2451725_2452037_+|heavy-metal-associated-domain-containing-protein
MTTQSDIEIIETATASSCCGGSSCGTGAAGAEGAVTTVYQVKGMTCGHCEGAISGEVSAIAGVTSVTAVAATGLVTVVSEAALDEAAVRAAVDEAGYELVGTA
>NZ_CP042266.1|WP_146480123.1|2452751_2454041_-|citrate-synthase
MSDNSVVLRYADGEYTYPVVESTVGDKGFDIGKLRAQTGLVTLDSGYGNTAAYKSAITYLDGEQGILRYRGYPIEQLAERSTFVEVAYLLINGELPTVDELAVFKNEITQHTLLHEDVKRFFDGFPRDAHPMAMLSSVVSALSTFYQDSHNPFDEKQRHLSTIRLLAKLPTIAAYAYKKSIGHPFVYPRNDLGYVENFLRMTFSVPAQEYDLDPVVVAALDKLLILHADHEQNCSTSTVRLVGSSQANMFASISAGISALWGPLHGGANQSVLEMLEGIQAAGGDVDSFIRKVKNKEDGVKLMGFGHRVYKNFDPRAKIIKAAAHDVLSALGKSDELLDIALKLEEHALADDYFVERKLYPNVDFYTGLIYRAMGFPTEMFTVLFALGRLPGWIAQWHEMIKEPGSRIGRPRQIYTGEVLRDFVPVEAR
>NZ_CP042266.1|WP_146480124.1|2454270_2456487_-|ATP-dependent-RecD-like-DNA-helicase
MSNLAALAVLEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGSLLGAQPGESLRMEGRWGSHPQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPKIAERIVDHFGTDTLDVIEQEPARLVEVPGLGPKRTRLIGTAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDGSISVVKNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSTDQGHCFLPEERLIADAVKLLQVDTGLVIECLAELAADEEGVVREQVPGPEGGEPVTAVYLVPFHRAELSLAAQVLRLLRTPEDRMPAFRDVDWEKALLWLAERTGAELAPEQEAAVRLALTSRVAVLTGGPGCGKSFTVRSVIELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLRDLLADGGPVPHVRLTRIFRQAQQSGVVTNAHRINSGEQPLTTGLSDFFLFVEEETEDAGKLAVDVAARRIPAKFGLDPRRDVQVLAPMHRGPAGAGVLNGLLQQAITPARPDVAEKRFGGRVFRVGDKVTQIRNNYDKGKNGVFNGTVGVVTALNVDDQKLTVVTDEDEEVPYDFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLVVLVGSRRAIGQAVRTVSAGRRCTALDHRLSRG
>NZ_CP042266.1|WP_146484210.1|2456624_2457428_-|TIM-barrel-protein
MTVRQMSLPELAHACARLGIPGAGLWREPVRAYGVYAAAGLMRDMGLTVTSLCRGGFLTAADTAGRSRALDDNRAALDEAAALGTDTLVLVSGGLPPGSRDLAGARERVADALAELVPHARAAGVRLAIEPLHPMYAADRCVVSTLAQALDIAERFPPDRVGVVVDTYHVWWDEQASTQVARAGAAGRIHAFQLADWTTPLPHGVLNGRGQLGDGCVDLRHWRRTVDAAGYRGPIEVELFNEGLWGRDGAEVLAETAARFTEHVAGP
>NZ_CP042266.1|WP_146480125.1|2457485_2458637_-|DUF993-family-protein
MTGARPASEPRPAPEPGRPRGYHPALPAPPPRSRRVFAAAHIVAGRAPGSAATGSAAVDWDATLAFRRHLWAHGLGVAEAMDTAQRGAGLGWPAAAELIRRTAAESAATGGALVCGAGTDQLTGPATLSDVLAAYEEQLAHVERCGSRAVLLASRALAATARSPEDYQQVYGELLRQAASPVILHWLGPAFDPALGGYWGSDDRETATDTLLAVIAARPHQVDGVKISLLDAAHEIALRRRLPPGVRCYTGDDFHYPELIAGDAHGHSDALLGVFDPLAPLAAEALRALDDRGTAAFRAVLDPTVELARHLFAPPTRHYKTGVVFLAWLAGHQRHFTMADGLHTARPLAHLARAHELAARLGLFPDPESAGARMASLLTRDGA
>NZ_CP042266.1|WP_146480126.1|2458633_2459785_-|Gfo/Idh/MocA-family-oxidoreductase
MTRRTVRIAVNGVTGRMGYHQHLVRSLLELRKEGGLDLGDGRTLWPEPVLVGRREPALRSIAERHQLPYWATDLDAVLADDTVDVYFDAQATAARADALGRAIAAGKHIYTEKPTATGLDSALELVRLARSAGVRHGVVQDKLFLPGLRKLKRLIDGGFFGEILSVRGEFGYWVFEGDWQPAQRPSWNYRGEDGGGITADMFPHWSYLLESLFGRVTSVMAYATTHVPRRWDERGTPYAATADDAVYAVFELAGGAVAQINSSWAVRVNRDELVEFQVDGVHGSAVAGLRHCRIQHRTATPRPVWNPDLPSTENFRDQWQEVPDNQLFGHAFKAQWELFLRHVALGEPYHGDLAAGARGVQLAELGLRSSAEGRRIPVPELML
>NZ_CP042266.1|WP_146480127.1|2460086_2461148_+|LacI-family-DNA-binding-transcriptional-regulator
MTVTLADVAARARVSPATVSRVLNGNYPVAASTRERVLRAVEELDYVLNGPASSLAAATSDLVGILVNDIADPFFAIMAGAAQGEIGGQEGTGRAGGEKLAVVCNTGGSPDRELTYLTLLQRQRAAALVLTGGALEDPVHIAAMSAKLTRLADAGTRIVLCGRPPLPDNDALLAALAFDNRGGGRKLTEHLLTLGHRRIGYVAGPTERTTTRHRLEGHRAALRAAGIDEDQERMTLHGPYARRSGYDSTLELLRRAPGLTAVVAANDTVALGACAALRDQGLRIPQDVSVAGFDDLPFSVDVVPALTTVRLPLAEAGARAGRLAMGREAAPPGGIATVEAELLVRASTAPPRG

Crispr_ID: NZ_CP042266_9

• CRISPR_ID: NZ_CP042266_9
• CRISPR_location: 2633381-2633650
• CRISPR_type: Orphan
• Repeat_type: I-E
• Spacer_info: 4 spacers

Consensus repeat of NZ_CP042266_9

Consensus_repeat	Method
GTGCTCCCCGCGCACGCGGGGATGGTCC	CRISPRCasFinder

spacers of NZ_CP042266_9

>9.1|2633409|33|NZ_CP042266|CRISPRCasFinder
GCTCACGCATCCGTTCGAGCCGGATGAGGACGA
>9.2|2633470|33|NZ_CP042266|CRISPRCasFinder
CACCTCCATCAGCGGAATCCCCAGAACATCCGC
>9.3|2633531|32|NZ_CP042266|CRISPRCasFinder
ACCACGGCGGCATCCCCTGGGCTAGGGAGCTC
>9.4|2633591|32|NZ_CP042266|CRISPRCasFinder
CTGTGCCTCGCCCGTGGGGTAACAGGCGTCAC

CRISPR arrays and Neighbor proteins around NZ_CP042266_9

CRISPR arrays

The CRISPR arrays of NZ_CP042266_9

>merge|NZ_CP042266|9|2633381-2633650|CRISPRCasFinder
GTGCTCCCCGCGCACGCGGGGATGGTCCGCTCACGCATCCGTTCGAGCCGGATGAGGACGAGTGCTCCCCGCGCACGCGGGGATGGTCCCACCTCCATCAGCGGAATCCCCAGAACATCCGCGTGCTCCCCGCGCTGCGGGGATAGTTTCACCACGGCGGCATCCCCTGGGCTAGGGAGCTCGTACTCCCCGCGCCCGCGGGAATGGCCCCTGTGCCTCGCCCGTGGGGTAACAGGCGTCACGTGCTCCCCGCGCCCGCGGGGATCCCCC

>NZ_CP042266|9|8|2633381-2633650|CRISPRCasFinder
GTGCTCCCCGCGCACGCGGGGATGGTCC	GCTCACGCATCCGTTCGAGCCGGATGAGGACGA
GTGCTCCCCGCGCACGCGGGGATGGTCC	CACCTCCATCAGCGGAATCCCCAGAACATCCGC
GTGCTCCCCGCGCTGCGGGGATAGTTTC	ACCACGGCGGCATCCCCTGGGCTAGGGAGCTC
GTACTCCCCGCGCCCGCGGGAATGGCCC	CTGTGCCTCGCCCGTGGGGTAACAGGCGTCAC
GTGCTCCCCGCGCCCGCGGGGATCCCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146480250.1|2635627_2636089_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146480252.1|2638103_2638973_+|phosphotransferase	unknown	unknown	gnl|CDD|270702
NZ_CP042266.1|WP_146480248.1|2631721_2632954_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|275041
NZ_CP042266.1|WP_146484238.1|2642378_2643950_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146480244.1|2629008_2629797_-|hypothetical-protein	unknown	unknown	gnl|CDD|226011
NZ_CP042266.1|WP_146480245.1|2629834_2630476_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|224332
NZ_CP042266.1|WP_146480242.1|2627277_2628423_-|4-hydroxyphenylpyruvate-dioxygenase	unknown	unknown	gnl|CDD|273528
NZ_CP042266.1|WP_146480254.1|2640334_2640979_-|deaminase	unknown	unknown	gnl|CDD|223340
NZ_CP042266.1|WP_146480240.1|2623859_2624282_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146480247.1|2631477_2631735_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146484236.1|2626455_2627178_-|response-regulator	unknown	unknown	gnl|CDD|223816
NZ_CP042266.1|WP_146480243.1|2628544_2629012_+|AsnC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224439
NZ_CP042266.1|WP_146480253.1|2638977_2640207_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|224314
NZ_CP042266.1|WP_146480246.1|2630968_2631481_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146484239.1|2644560_2645100_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|273701
NZ_CP042266.1|WP_146480251.1|2636676_2638104_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|378971
NZ_CP042266.1|WP_146480241.1|2624468_2626472_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|223715
NZ_CP042266.1|WP_146484237.1|2641031_2642216_-|serine-hydrolase	unknown	unknown	gnl|CDD|365903
NZ_CP042266.1|WP_146480255.1|2644189_2644528_+|divalent-cation-tolerance-protein-CutA	unknown	unknown	gnl|CDD|376987
NZ_CP042266.1|WP_146480249.1|2633652_2635443_-|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|223989

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146480252.1|2638103_2638973_+|phosphotransferase	gnl|CDD|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	9.59307e-11
NZ_CP042266.1|WP_146480248.1|2631721_2632954_-|methyltransferase-domain-containing-protein	gnl|CDD|275041	TIGR04188, conserved_hypothetical_protein, methyltransferase, ATP-grasp peptide maturase system. Members of this protein family are predicted SAM-dependent methyltransferases that regularly occur in the context of a putative peptide modification ATP-grasp enzyme (TIGR04187, related to enzymes of microviridin maturation) and a putative ribosomal peptide modification target (TIGR04186).	1.09799e-80
NZ_CP042266.1|WP_146480243.1|2628544_2629012_+|AsnC-family-transcriptional-regulator	gnl|CDD|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	7.79053e-28
NZ_CP042266.1|WP_146480245.1|2629834_2630476_-|helix-turn-helix-domain-containing-protein	gnl|CDD|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.2937e-27
NZ_CP042266.1|WP_146480242.1|2627277_2628423_-|4-hydroxyphenylpyruvate-dioxygenase	gnl|CDD|273528	TIGR01263, 4-hydroxyphenylpyruvate_dioxygenase, 4-hydroxyphenylpyruvate dioxygenase. This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see . In some bacterial species, this enzyme has been studied as a hemolysin. [Energy metabolism, Amino acids and amines].	6.93987e-180
NZ_CP042266.1|WP_146480254.1|2640334_2640979_-|deaminase	gnl|CDD|223340	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism].	4.39406e-13
NZ_CP042266.1|WP_146484239.1|2644560_2645100_+|GNAT-family-N-acetyltransferase	gnl|CDD|273701	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. [Protein synthesis, Ribosomal proteins: synthesis and modification].	2.82771e-05
NZ_CP042266.1|WP_146484236.1|2626455_2627178_-|response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.72012e-78
NZ_CP042266.1|WP_146480253.1|2638977_2640207_-|helix-turn-helix-domain-containing-protein	gnl|CDD|224314	COG1396, HipB, Predicted transcriptional regulators [Transcription].	2.82372e-07
NZ_CP042266.1|WP_146480244.1|2629008_2629797_-|hypothetical-protein	gnl|CDD|226011	COG3480, SdrC, Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms].	4.65725e-34
NZ_CP042266.1|WP_146480251.1|2636676_2638104_+|helix-turn-helix-domain-containing-protein	gnl|CDD|378971	pfam12844, HTH_19, Helix-turn-helix domain. Members of this family contains a DNA-binding helix-turn-helix domain. This family contains many example antitoxins from bacterial toxin-antitoxin systems. These antitoxins are likely to be DNA-binding domains.	2.1133e-08
NZ_CP042266.1|WP_146480241.1|2624468_2626472_-|HAMP-domain-containing-protein	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.19845e-68
NZ_CP042266.1|WP_146484237.1|2641031_2642216_-|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.77953e-55
NZ_CP042266.1|WP_146480255.1|2644189_2644528_+|divalent-cation-tolerance-protein-CutA	gnl|CDD|376987	pfam03091, CutA1, CutA1 divalent ion tolerance protein. Several gene loci with a possible involvement in cellular tolerance to copper have been identified. One such locus in eubacteria and archaebacteria, cutA, is thought to be involved in cellular tolerance to a wide variety of divalent cations other than copper. The cutA locus consists of two operons, of one and two genes. The CutA1 protein is a cytoplasmic protein, encoded by the single-gene operon and has been linked to divalent cation tolerance. It has no recognized structural motifs. This family also contains putative proteins from eukaryotes (human and Drosophila).	6.88506e-40
NZ_CP042266.1|WP_146480249.1|2633652_2635443_-|DEAD/DEAH-box-helicase	gnl|CDD|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	6.32985e-55

Protein sequences

>NZ_CP042266.1|WP_146480248.1|2631721_2632954_-|methyltransferase-domain-containing-protein
MTAPDRDRSARRKVLRTLLDSGALAPDWVPSFEAVPRSAFLPDLMWPFGMDTGTSISVSRSDDSDTWYEYADADVPVVTQWDDGAHAGTEPGRLSTSSASMPSVVARMLRDLDVRPGARVLEIGTGTGWNAALLSHRLGAANVVTVEVDAVVAEAARARLAAVGLHPEVVIGDGLLGHPDGAPYDRIIATVGIRDLPYAWVQQVRPGGLIVAPWGTRYSNVDCVVRLVVAEDGQSASGTFTGAVEFMKARSQRYRVDQAAYLPHGFPGGAVTTVTNLTAADLGLDDRLRHPFAAVSGLLAGGCTLLADRRGPAVSAWLYSLTDLSWAAAVLTDGQAESTVYESGPRRLWGELSRAHQWWVEAGRPDPTCFGLTVTADTTAAWFHASGNALPLPLSEHGGSSGKPVRISRG
>NZ_CP042266.1|WP_146480247.1|2631477_2631735_+|hypothetical-protein
MSRYRITYAGEAEKVYRQMNPQFRVQFDTAMQTTLAKDPYGHGSAPANPGREPDRRLATIAGAIVRYYIAGPPALVVTAVKIIHG
>NZ_CP042266.1|WP_146480246.1|2630968_2631481_+|hypothetical-protein
MEVPSSIAGVRAALEPDRAAEFDAVVARTPAKHLVYVILDWTLPRGAEKSDAVTVGRLRGGDFSGVRDGDGNPVTPTHPPLDETQEEPAPAVWSTGFPIGSKTFPATIDGIRGALDQDRRAEFEAEITRTPGHELTYAALRWGYPPEDLAEEDALVAELRAAHQGRGEGL
>NZ_CP042266.1|WP_146480245.1|2629834_2630476_-|helix-turn-helix-domain-containing-protein
MTAETSQTLDRGLRVLKLLADTDHGLTVTELSARLGVNRTVVYRLLATLEQHALVRRDLGGRARVGLGVLRLGRQVHPLVREAAMPALRALAEDIGATAHLTLVDGAEALAVAVVEPTWTDYHVAYRAGFRHPLDRGAAGRAILAARQGNGDGPAYILTHGELEAGASGAAAPLVGVTGIEGSVGVVMLSDSIPERVGPRVVDAAREVADALR
>NZ_CP042266.1|WP_146480244.1|2629008_2629797_-|hypothetical-protein
MLSRLTRPRALLLSAVPVAGLLVAAAFAPLPFVIAQPGSTADVLGAQDGTPVISIQGAPVRKTTGELRMTTIYATGPATDVGVEDVADSWFRGDRAVLPREAVYPSGKSDKQVEKINLEAMAESQNDATKAALRYLGKNPAQVKVKLSLEDIGGPSAGLLFSLGIVDKLDGNGTGGDLTGGRSIAGTGTISPDGTVGEVGGVSLKTQAAKRDGATVFLVPKGECSDARAELPKGLKLIPVTTLKGAVDSLRALEKGDKTPSC
>NZ_CP042266.1|WP_146480243.1|2628544_2629012_+|AsnC-family-transcriptional-regulator
MAIDHLDGRLIVLLAREPRIGVLEASRRLGVARGTVQARLDRLQSTGVIRGFGPQVDPAALGYPVTAFATLEIKQGQGPDVRAHLASVPEVLELHTTTGEGDMLCRLVARSNADLQRVIDRVVGFEGIVRASTAIVMENPVPLRIIPLVEQAAED
>NZ_CP042266.1|WP_146480242.1|2627277_2628423_-|4-hydroxyphenylpyruvate-dioxygenase
MTETIDHHPTTAREADPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMKLVAYSGPENGSRETASYVLENGSARFVFTSVIKQSTEWGGFLANHVAEHGDGVVDLAIEVPDARAAYAYATQHGASGLIEPYELKDEHGTVVLAAIATYGSTRHTLVERRGYDGPYLPGFVAADPIVEPPARRTFQAIDHCVGNVELGRMNDWVAFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPAIAKKKSQIDEYLEFYGGAGVQHIALATNDIVATVRTMRAAGVRFLDTPDSYYDTLGDWAGETRVPVETLRELKILVDRDEDGYLLQIFTKPVQDRPTVFFEMIERHGSMGFGKGNFKALFEAIEREQERRGNL
>NZ_CP042266.1|WP_146484236.1|2626455_2627178_-|response-regulator
MIAEDDDKQAELVRRYLLREGHSVTLVTDGRAAVEAVRHRAPDLLVLDVMMPRIDGLDVLRILRAEAYELPVLMLTARSTEDDLLLGLDLGADDYMTKPYSPRELMARVRTLLRRTVSRGAPAPPVDEHLLTVGELVIDPEKHEVTIRGAGVDCTPGEFRILAAMAAEPGRVFTRQRLLQELHGYTRYIGDRTVDVHIMNLRKKVESKPRRPEHLVTVFGVGYKLVAPAPAGGGHHGRAS
>NZ_CP042266.1|WP_146480241.1|2624468_2626472_-|HAMP-domain-containing-protein
MAVRRNRPGKQDIRARRLPLRKSLLARLLAVSALVAVCSVAATAWLAAQTTTGAIKREQGRDLAKDAQIYRELLGHAATSRQWDGVERKVTALAAAHDRRIVLVNQRTQLVIVDSSTAKNPPALPETPSALIDPLNTDAALVGATEKASTGTGAGANTGKGGIDPRAVGPFQLPREERKALRDLAEKATACLRRLSFTAEPMTTPSGRSYVRIAGLEPERYQQWCSLDRLAQPTATEEKAVAALNKLSDDCLRGSERSPLPLWLSHGSEGEPRILIGDRKGPIEPTLFPVKLPVPGPAEKTPVPRITITDMKLVPHKVDSVVENCVETARRNQLVSHVAARAELYISDPDGSPTTPGFELSPDDTARIAGVAALVLALTVGASVLAATRLVRPLRALTSAAQLMKDGEATAPVPVRSDNEIGRLAAAFNDMAEHRIRLETQRREMIGDVAHELRTPLSTIRGWLEGAQDGVADLDPAFVSSLLEEAVQLQHIIDDLQDLAQADAGELRLSPAPVRIGELLAQVAAAHAPRAETAGVRLAVTVPDGLPELSADPVRLRQAVGNLVSNAVRHTPGGGTVTLRARAAGTRLTVEVEDTGSGIPAEDLPYVFDRFWRADKSRNRRTGGSGLGLAIVRKLAEAHGGSASARSTAGEGSVFTLELPVAGPPAR
>NZ_CP042266.1|WP_146480240.1|2623859_2624282_-|hypothetical-protein
MTAASSRRALRALAVTTAALGAVLASGSGAFADSSPSPAVKLKAPAAESQKCTPLPKKGTAEKPVVGKDGAIFCLQPADRETISKVVLPRGGVAAGERPATAQDGGNPTTVIVGATAAALTIAAAGTVVIRRRAAHHDAR
>NZ_CP042266.1|WP_146480249.1|2633652_2635443_-|DEAD/DEAH-box-helicase
MTTTASHSHHLSPAYPGRAPWGTAGKLRAWQQGAMDRYVQEQPRDFLAVATPGAGKTTFALTLASWLLHHHVIQQVTVVAPTEHLKKQWAAAAARIGIKLDPDYSAGPLSREYHGVAVTYAGVGVRPMLHRNRCEQRKTLVILDEIHHAGDSKSWGEACLEAFDPATRRLALTGTPFRSDTNPIPFVTYEEGNDGIRRSAADYTYGYGHALGDGVVRPVIFLSYSGNMRWRTKAGDEVAAKLGEPMTKDAISQAWRTALDPRGEWMPNVLRAADQRLTEVRKSIPDAGGLVIAADQDSARAYAKLIREITGTKATVVLSDDTGASKRIDEYSESTDRWMVAVRMVSEGVDVPRLAVGVYATTISTPLFFAQAVGRFVRSRRRGETASVFLPTIPMLLGFANEMEVERDHVLDRPKKEGEEDPYAESEKEMDEANKEQDEDTGDQDQLPFEALESDAVFDRVMYNGAEFGMQAHPGSEEEQDYLGIPGLLEPDQVQMLLQKRQARQIAHSRKKPDDEADLLELPAERRPVVSHKELLELRKQLNTMVGAYVHQSGKPHGVIHTELRRVCGGPPSAEATAGQLRERIKKVQEWATRMR
>NZ_CP042266.1|WP_146480250.1|2635627_2636089_-|hypothetical-protein
MRALVARLAARLRPGRHRATHLGARVRRTPPAPVSPWNRPFTGPTQAQVRTYFARQAATPLRTRFLHRGHRTLYIAPQGIDLPLLALLAGPPAPRRETCCVCGRTTAAPVEIRDVMAPGGRIHTLYSCPHHIDAGLTGPGGDHLQAGARRRVS
>NZ_CP042266.1|WP_146480251.1|2636676_2638104_+|helix-turn-helix-domain-containing-protein
MRPPSTNRSQGKPEGEISVERETEGESRVTIGPRSRTRGALMSTTESFGQLLRRLRVQAGRTQEEQAEAVNTASGRDTLTRREISRYETGETVPTKHTVTQIARSCGVAPEVLLNAAAIARSRRKGEMHQGDKPPSPELGTPTVELAAAVSLDFADFIAPWHADDDHVCFLRDSLARIAGQYVCTPVLPLFDDLVGVRDETFGLLRRRQKPHHARELYVLAGASCLLLAHASQNLGNSHAALAQIRTASTCAQQIDHKPLRAWAAATAALIAEWSAQPTRALQLAEKAIALAPAGHSRIRAFAIQARTAARTGDQRAADAALTRMATAQVEHPDTDELVELGGIFTFPPAKQDYYTGTTFSLLGRYEEAEKCATRAVNQYRHGPPAARSYGDEALATIDIALARIRQDDIDTAARRLQPILALPSDQRIQQLALGLRPVTRALEESPALHTSGATDLLDLTRKYQVLGAPALPSL
>NZ_CP042266.1|WP_146480252.1|2638103_2638973_+|phosphotransferase
MTSTQRTQETAVRDACRRTGLSTAGLEVIRQHATGVYLLPTERAVARVRPAAESAAARMLAELLRWLIGHGFPVVEPLAEPVEEPPYVVTLWSHYPQPTTPPPAGALGGILRELHCLPEPPVALPSYQPLASLTTSVKRSHTLETDECAWLVEMTDKLLYEYRQLDFPLGRGLIHGDAYPGNTLWDGEQVRLGDWDEVAVGPRELDLANTFQGVRYGRTAEEIQSFTDAYGHDPSPWPGLRTLVTMRDLHTLGSFIQRADTGDQAAAAELRHRLDTLRSGRPRAQWGRH
>NZ_CP042266.1|WP_146480253.1|2638977_2640207_-|helix-turn-helix-domain-containing-protein
MLEEPEEIGRRVRRARLRLGMPQADLAAALGRTQGWVSKVERGLIELDRVGLLNEVAAELHVHPNDLIGRPYNSSPDENQWQIAASAILRELRRYDLAPVFDGMPRSARELWWETERLHRLRDAAANVAILRTLPDLFREARALAEVSTGHEQEEAYAVYAVCCKFAHTAAHALGHPELVAMACERAAWSARLSGDPVLPAVADWMRVWDMWATADWDDAVALSDRALGSIRQEYEQGDTLAVRAWGALHLRAAVSAARGGRAAEAMERIEHARTAAGRLGDHTGPPAHDRHSLTFSAGNVQIHAISVALELGEHGRALDLNRTTAPTLVAALPNSRRGHHHMDLARAWLWDGSRDRALAELETAERLAPQLVRNHPIARSTLRSLVCAERMSTREKLRRMSNRFHLDG
>NZ_CP042266.1|WP_146480254.1|2640334_2640979_-|deaminase
MAQLLKVQNFNISSDGIAAGENQSLESPFGLPRPERLFAWAGATASWPMRTDPGGSRGLDDYFTRDFARNIGAEIMGRNKFGPQRGPWQDDEWRGWWGDEPPFRTPVFVLTHHRRPSFTLSDTTFHFVAGEPATVLEQAREAAQGKDVRLGGGVTTIRQFLDADLVDTLHVVVSPVTLGSGLRLWESPDELLDRFHLDVVPSPSGVTHHLFWRK
>NZ_CP042266.1|WP_146484237.1|2641031_2642216_-|serine-hydrolase
MGVAAPLCALTAPGAALAATHDRRAPAGPVPEALLPGGAYDRYIAGLAEQDRFSGTVLLTHRGRPVLSRAYGTADKERSLPNRTDTVFALASASKPFTALAVLQLAQQGKIDFDGTLGTYLPGFPAAIADTVTIHHLLTHTSGMGDLLNNREFLDNAGTWTSADQVTTELMKIIRKQPLEFAPGTANRYSNSGYDTLGAIVAAVSGESFYAYVHRNVFAPAGMTRSGFYTRPQWLTDERIAHPYTLDASGRRIDAVRNGVGAARMFIGTGGGNAFSTGPDLVRFARALQAGRLLNPAYTELYLSPKLPKRSRSAPVPGVRSFISYGGPAPIVNDHRLLTHAGSAAGESTSWTVYRDAEWCGVVLSNYDEIPLEAIIEQERTPIVGPSGPRAAQR
>NZ_CP042266.1|WP_146484238.1|2642378_2643950_-|hypothetical-protein
MIALATAGTAFGAQALREKVLRPDRLAADAPTRLTMVEPAANVRAPAAQVRSIVDENLAAGSRNWIPDQNIGKASSDTYGHIMGYTSTTSAGHGDAVDFHVSVRSAKTYRVSVFRIGYYGGKGARLMTTSPVLTGRRQAAPVSDRETGALSCAWARSWGIRVPESWRSGLYQAVFTTADGYRSSTPFVVREPQRSSALLCVIPFTTYQAYNMWPKDGKAGKNLYGGYLPGGGAGGAASRSLKVSFDRPYSGAGTPSWFNMDTSFVRWAEERGYDITYASSVDLHDGSVDPARYRAVFFPGHDEYWSKQMYDSASGAVAAGRNLAFLGANNVYFHVRLERSATGRPDRVMACYKSAPDPGAGESGATTIWRSILPDRALAEQRLLGIQFSGIVKKPTPLVVRQPGHWLWRGTGVKDGEQLANLVGVEADCYDIHSPQPQGRRTLLADSRYEDSKQAKTKTQHTAVTEHTGGGTVFMAGTFHWPLMLVDDDAYTRKTVKPSGATKAKIRRATANAVFRLTAGAPR
>NZ_CP042266.1|WP_146480255.1|2644189_2644528_+|divalent-cation-tolerance-protein-CutA
MATDIVIAQTTIDDEGRAEALARGAVEARLAACAHIDPPFKAVYWWQDAVRVEREWRISYKTTRDRLPALAEWVAAEHPYEVPQWIVLPVDGGSEAYLGWVAAESGPRTEAR
>NZ_CP042266.1|WP_146484239.1|2644560_2645100_+|GNAT-family-N-acetyltransferase
MDGPSAVRAEDALRLIYAEVFAEPPYGETAADLAASFRRFRHRTEGPGFRGALARTARGEPVGMAYGWPLPPETDWWDRLVEPAEPTELVAGETRREDGRRTFGLMELAVRSRWRGQGIARRLHESLLDGVGAERVLLNVRPDAGAAGAAYRAWGYRRVGEFRPADGTDSYDLMLLRLR

Crispr_ID: NZ_CP042266_10

• CRISPR_ID: NZ_CP042266_10
• CRISPR_location: 3619003-3619536
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 9 spacers

Consensus repeat of NZ_CP042266_10

Consensus_repeat	Method
NCGNTCGTCACGNCGGTC	CRT

spacers of NZ_CP042266_10

>10.1|3619021|51|NZ_CP042266|CRT
GAACGAGCTCGAGCCGGAGCCGGAGGAGCCGGAGCCCGAGCCGGTGCCGCG
>10.2|3619090|42|NZ_CP042266|CRT
GTACGGACGGTCCGAGGAGCCGGCGCGGAAGCCGCCCGCGGG
>10.3|3619150|66|NZ_CP042266|CRT
ACGGTTGAACGGACGGTCGCTGCCGCGGTGGCCGCCGCTGGGGCGGTCGTCGCGGCGGAACGACGG
>10.4|3619234|51|NZ_CP042266|CRT
GTCGCGGCGGTCGCGGTCGAAGGACGGGCGCTCGTCACGGCGGAACGAGGG
>10.5|3619303|48|NZ_CP042266|CRT
ACGGTTGAACGGACGGTCATCACGACGCTCATCACGACGGAACGACGG
>10.6|3619369|24|NZ_CP042266|CRT
ACGGTTGAACGGACGGTCATCACG
>10.7|3619411|36|NZ_CP042266|CRT
CGACGGACGCTCATCACGACGGTCACGGTTGAACGG
>10.8|3619465|18|NZ_CP042266|CRT
GTCACGACGGAACGACGG
>10.9|3619501|18|NZ_CP042266|CRT
ACGGCGCTCGAAGTTGCC

CRISPR arrays and Neighbor proteins around NZ_CP042266_10

CRISPR arrays

The CRISPR arrays of NZ_CP042266_10

>merge|NZ_CP042266|10|3619003-3619536|CRT
CTTGTCGTCGCGGCGGCCGAACGAGCTCGAGCCGGAGCCGGAGGAGCCGGAGCCCGAGCCGGTGCCGCGGTGGTCGTCGCGGCGGCCGTACGGACGGTCCGAGGAGCCGGCGCGGAAGCCGCCCGCGGGGCGGTCGTCACGGCGGTCACGGTTGAACGGACGGTCGCTGCCGCGGTGGCCGCCGCTGGGGCGGTCGTCGCGGCGGAACGACGGACGCTCGTCACGACGGTCGTCGCGGCGGTCGCGGTCGAAGGACGGGCGCTCGTCACGGCGGAACGAGGGGCGCTCGTCACGACGGTCACGGTTGAACGGACGGTCATCACGACGCTCATCACGACGGAACGACGGACGCTCATCACGACGGTCACGGTTGAACGGACGGTCATCACGACGCTCATCACGACGGAACGACGGACGCTCATCACGACGGTCACGGTTGAACGGACGGTCATCACGACGCTCGTCACGACGGAACGACGGACGCTCGTCACGACGGTCACGGCGCTCGAAGTTGCCCCGGTCGTCGCGGCGGTC

>NZ_CP042266|10|5|3619003-3619536|CRT
CTTGTCGTCGCGGCGGCC	GAACGAGCTCGAGCCGGAGCCGGAGGAGCCGGAGCCCGAGCCGGTGCCGCG
GTGGTCGTCGCGGCGGCC	GTACGGACGGTCCGAGGAGCCGGCGCGGAAGCCGCCCGCGGG
GCGGTCGTCACGGCGGTC	ACGGTTGAACGGACGGTCGCTGCCGCGGTGGCCGCCGCTGGGGCGGTCGTCGCGGCGGAACGACGG
ACGCTCGTCACGACGGTC	GTCGCGGCGGTCGCGGTCGAAGGACGGGCGCTCGTCACGGCGGAACGAGGG
GCGCTCGTCACGACGGTC	ACGGTTGAACGGACGGTCATCACGACGCTCATCACGACGGAACGACGG
ACGCTCATCACGACGGTC	ACGGTTGAACGGACGGTCATCACG
ACGCTCATCACGACGGAA	CGACGGACGCTCATCACGACGGTCACGGTTGAACGG
ACGGTCATCACGACGCTC	GTCACGACGGAACGACGG
ACGCTCGTCACGACGGTC	ACGGCGCTCGAAGTTGCC
CCGGTCGTCGCGGCGGTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146481014.1|3622333_3622696_-|CrcB-family-protein	unknown	unknown	gnl|CDD|223317
NZ_CP042266.1|WP_146484349.1|3621504_3622083_-|hypothetical-protein	unknown	unknown	gnl|CDD|237057
NZ_CP042266.1|WP_006348244.1|3623425_3623776_+|metallopeptidase-family-protein	unknown	unknown	gnl|CDD|240572
NZ_CP042266.1|WP_146481009.1|3611108_3612323_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146481004.1|3605164_3605704_-|dCTP-deaminase	unknown	unknown	gnl|CDD|234753
NZ_CP042266.1|WP_146481016.1|3626262_3627111_-|cytochrome-c-biogenesis-protein-CcdA	unknown	unknown	gnl|CDD|223856
NZ_CP042266.1|WP_146481008.1|3610117_3610675_+|flavoprotein	unknown	unknown	gnl|CDD|376786
NZ_CP042266.1|WP_146481019.1|3628509_3632499_+|ATP-dependent-RNA-helicase-HrpA	unknown	unknown	gnl|CDD|182986
NZ_CP042266.1|WP_146481011.1|3613344_3614346_-|IS481-family-transposase	unknown	unknown	gnl|CDD|366234
NZ_CP042266.1|WP_146481018.1|3628013_3628400_-|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NZ_CP042266.1|WP_003949541.1|3633519_3633726_-|developmental-transcriptional-regulator-BldC	unknown	unknown	gnl|CDD|133390
NZ_CP042266.1|WP_146481005.1|3605700_3606918_-|bifunctional-metallophosphatase/5'-nucleotidase	unknown	unknown	gnl|CDD|223808
NZ_CP042266.1|WP_146484348.1|3606914_3608198_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl|CDD|223837
NZ_CP042266.1|WP_146481017.1|3627107_3627926_-|thioredoxin-domain-containing-protein	unknown	unknown	gnl|CDD|239321
NZ_CP042266.1|WP_146481007.1|3608846_3610121_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|238045
NZ_CP042266.1|WP_146481012.1|3615657_3618804_-|hypothetical-protein	unknown	unknown	gnl|CDD|379232
NZ_CP042266.1|WP_146484350.1|3624102_3625818_+|hypothetical-protein	unknown	unknown	gnl|CDD|365906
NZ_CP042266.1|WP_146481015.1|3622692_3623205_-|CrcB-family-protein	unknown	unknown	gnl|CDD|376809
NZ_CP042266.1|WP_146481010.1|3612745_3613183_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146481006.1|3608246_3608672_-|ATP-binding-protein	unknown	unknown	gnl|CDD|340413

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146481014.1|3622333_3622696_-|CrcB-family-protein	gnl|CDD|223317	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning].	1.35739e-27
NZ_CP042266.1|WP_146484349.1|3621504_3622083_-|hypothetical-protein	gnl|CDD|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	1.47359e-05
NZ_CP042266.1|WP_006348244.1|3623425_3623776_+|metallopeptidase-family-protein	gnl|CDD|240572	cd12952, MMP_ACEL2062, Minimal MMP-like domain found in Acidothermus cellulolyticus hypothetical protein ACEL2062 and similar protein. The subfamily includes an uncharacterized protein from Acidothermus cellulolyticus (ACEL2062) and its homologs from bacteria. Although its biological role remains unclear, ACEL2062 contains a minimal metalloprotease (MMP)-like domain consisting of 3-stranded mixed 2-beta sheets and a HExxHxxGxxD/S (x could be any amino acid) motif. It may belong to a superfamily of bacterial zinc metallo-peptidases, which is characterized by a conserved HExxHxxGxxD motif.	4.71334e-48
NZ_CP042266.1|WP_146481007.1|3608846_3610121_+|helix-turn-helix-domain-containing-protein	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.38499e-10
NZ_CP042266.1|WP_146481004.1|3605164_3605704_-|dCTP-deaminase	gnl|CDD|234753	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed.	9.26667e-51
NZ_CP042266.1|WP_146481016.1|3626262_3627111_-|cytochrome-c-biogenesis-protein-CcdA	gnl|CDD|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	1.22986e-22
NZ_CP042266.1|WP_146481008.1|3610117_3610675_+|flavoprotein	gnl|CDD|376786	pfam02441, Flavoprotein, Flavoprotein. This family contains diverse flavoprotein enzymes. This family includes epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance. dipicolinate synthase catalyzes the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenyl-acrylic acid decarboxylase (EC:4.1.1.-).	1.37887e-13
NZ_CP042266.1|WP_146481011.1|3613344_3614346_-|IS481-family-transposase	gnl|CDD|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.1891e-21
NZ_CP042266.1|WP_146481018.1|3628013_3628400_-|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.000514298
NZ_CP042266.1|WP_003949541.1|3633519_3633726_-|developmental-transcriptional-regulator-BldC	gnl|CDD|133390	cd04762, HTH_MerR-trunc, Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins. Proteins in this family mostly have a truncated helix-turn-helix (HTH) MerR-like domain. They lack a portion of the C-terminal region, called Wing 2 and the long dimerization helix that is typically present in MerR-like proteins. These truncated domains are found in response regulator receiver (REC) domain proteins (i.e., CheY), cytosine-C5 specific DNA methylases, IS607 transposase-like proteins, and RacA, a bacterial protein that anchors chromosomes to cell poles.	3.77068e-14
NZ_CP042266.1|WP_146481005.1|3605700_3606918_-|bifunctional-metallophosphatase/5'-nucleotidase	gnl|CDD|223808	COG0737, UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism].	8.86183e-26
NZ_CP042266.1|WP_146484348.1|3606914_3608198_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl|CDD|223837	COG0766, MurA, UDP-N-acetylglucosamine enolpyruvyl transferase [Cell envelope biogenesis, outer membrane].	1.50124e-78
NZ_CP042266.1|WP_146481017.1|3627107_3627926_-|thioredoxin-domain-containing-protein	gnl|CDD|239321	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.	1.43709e-31
NZ_CP042266.1|WP_146481015.1|3622692_3623205_-|CrcB-family-protein	gnl|CDD|376809	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB). CRCB is a family of bacterial integral membrane proteins with four TMs.. Over expression in E. coli also leads to camphor resistance.	6.94112e-28
NZ_CP042266.1|WP_146484350.1|3624102_3625818_+|hypothetical-protein	gnl|CDD|365906	pfam00149, Metallophos, Calcineurin-like phosphoesterase. This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues.	1.31021e-13
NZ_CP042266.1|WP_146481012.1|3615657_3618804_-|hypothetical-protein	gnl|CDD|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	4.15062e-06
NZ_CP042266.1|WP_146481019.1|3628509_3632499_+|ATP-dependent-RNA-helicase-HrpA	gnl|CDD|182986	PRK11131, PRK11131, ATP-dependent RNA helicase HrpA; Provisional.	0
NZ_CP042266.1|WP_146481006.1|3608246_3608672_-|ATP-binding-protein	gnl|CDD|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	2.21269e-19

Protein sequences

>NZ_CP042266.1|WP_146481012.1|3615657_3618804_-|hypothetical-protein
MASAPPSPRGLTHAGRILGAAVLRCRGSRGGESLQHHNGRSRTAIRRSVATAVTVALGAGLVTAVAPAATAAPAAPATNPRANAAGEAVLPPQDRRTPRRVAVHEAGPTGYLATVEGNSTRVWTDFATGETRPVANDHQPGHSGLRSRTSVGDDGTRTVTITDLATDRNTAYRLPREAIYAEAYTRDAIVVYRKSAEGAITSLSILRRAADGTTTETPVTGVPDNSTSLLVFPREQQDFAAVIRARRGNIGVVSSWYLDYATAKLTEVPVGWSLHQPGQHRVIISFDPLENRVTTFDLRKPDAAPVVTDIPAPQGLEQRSGAVALVGDTILVSREINPYAKAPVLGGKLFAVPIGNTGETRELLPYATHQLVTAPDGSVLVTGGSSPRDWAVRRVTAEADGSPKMTTAHQIPAMPVPIDGLALGGGRLSYVAQPEGGQWRTLHSHDVTGSGTPVIGPRDKGYESNSPATGELHSLGDGRSAFVNGAGVLVPNPDGSLNSVDAPRPATLDEASGRYLILSGSADWQYIGDVRQHWGTNVPISRIKTAASVWGTTLWTPGKTAGSVVALDLKTRKSQPELKLGSGCVPNDLQAVGRWLYWACGTTKAGVYDRTAAKSLPVAAGGRAKLGDGFVVRESSGELALTNLHTGTTTPVATIPANAKWAVDKFGGHLAYTDAEQAIRVRAVDVPRGPIALAESEIDSAFTPAASSDDRTWNGHWQLSRPAGTWSVTVKNAAGAVVRTLAQGSVPQTGARLAAVWDGKSAAGRTLPNGKYGVTLTVDGRPLVSNWTTLYGSHDAPRDYNADGVPEVVTRLGADLTTHQGLVKTATGGTVQRVSKGWKNITAVLPMGDMNHQGWDDLVVRNTKGELWRHEGTGTGLPGPTSARVRIGGGFAAFDTILPAGDLTGDGRGDLLARKPDGKLFVYAVTATGALRSAGTVSGSFKGLTLIAPGDLTGDRHGDLLARDAGGELWRYNGTGKGTLGAKTLVQKDWAVTGKVFAGIGDLNGDGNADLVSRDTTGRLWQHLGTGKGTLSAATQVGTGWQRYTSLH
>NZ_CP042266.1|WP_146481011.1|3613344_3614346_-|IS481-family-transposase
MWWRCLGSTPHTEVFASHRNARLTVHGRRILVERVAAEMGISRPTTHKWVRRWRAEGDSGLADRSSRPHTTPHRTPAVVEAEVCRIRTVRKLGPARIGPVLGLPASTVHRILVRHGLNRLAFLDRPTGRVIRRYEHARPGDLVHVDIKKLGNIPHGGGHKVMDRRQAMDNKLATTDERRSCKPVIGYSFVHSAVDDHSRPAYSEVLPDERRHTAAGFWQRANAFFAAHGITVQRVLTDNGSCYKAKLFTRTLATAGITHKKIRPYRPQTNGKVERFNRTLLDEWAYQRPYHSNDERTRALADFLHTYNHHRSHTALGGHPPISRVNNPAGQYT
>NZ_CP042266.1|WP_146481010.1|3612745_3613183_-|hypothetical-protein
MAIHVCPSTIEAIMRTVDEEGGAALIKNARVKSLEGRDRLRMERLQRVYQLLHRRGLNCYPKRPSCPDEWWSFAVYRPELVTVDLSAIGTDPELSTLMERVLNAFRHPYSHADAPYVGSFVGALRKLNAARPAQPGAEQRRLHVA
>NZ_CP042266.1|WP_146481009.1|3611108_3612323_+|hypothetical-protein
MSTHDEPTVSLVTVDRETASIILSRSDGKEAHFPLSPSFFAASSTLSRLHVPLSLNVLIASTLSGDDILFELPQYDAPTGQLGGRLVVYLDQNKWSEIGNALHAPSKVSDSSRRAAEKLAQWVKEGRIILPASAGHHNETTKRFDTRKRYSLGLTVLQYSRGWQMRHPLQVRRNELHDSFCHRSGQLAKVRSAPVFTLAPDALYSTAQRGMRHYSAPADFEPPLAFTTEALVTATSSIDVMLDTERIEPGPKTSWAEVNQRFSDWLDEQDIDSQQKRKHIDAFFLTDIQKEVAEEAHSAALAIDDLSRWFLREAIGDIRRFPALGLFREMLHNRHLNKGTRWRLNDLTDMMYLSCAAGYADFVVCERHMRDPLAHGLRRLGLKTPVYRHLAEAVDAIEETLTEP
>NZ_CP042266.1|WP_146481008.1|3610117_3610675_+|flavoprotein
MSDQPAQQIKKPFLYVVVCAAGIAGDVGRLITAAQDANWEVGVVATPQGLGFLDAPAVEEQTGYPIRSAWRLPGDPRPLPPADAIAVAPATFNTINKWAAGISDTLALGILCEAHGFGIPTAVLPYLNSAQAAHPAYARSLEQLREMGVLIGSYEPHQPKAGGGADRFRWEAALELLTPKVPLAG
>NZ_CP042266.1|WP_146481007.1|3608846_3610121_+|helix-turn-helix-domain-containing-protein
MAEVQSEAQRIGEVIRQARVLRRRSQKDVATELGYHQSKVSRLESGRGTQDITVLREVARVLDIPPDRLGLAPSPPTNPSTPETEDMRRRRLLTAGAAVLAVPATPLVPGHPELIQSLLPGPSPAFTEPVGDLPQLRMQTANARRLFCTCDYTALERTLPGLIGQLRRAAADNPGSSDLSGLLATAYQTSAGLLLKQSDLGNAWLAVGRAMAEAERSSDPVVLASSVRVHAHVLARDGHSAQAITLVRHTADQLTGSYDRRSPEYLAALGLLLLRGVTAASTGGDRSATEDFLAEARDVAHYVSLDRPDAWANFSPTNVTLHSISAMVVFGDAGIALDAARPLMRRHIPVPERRAALWVETARAYNQQGRLADGYQALRIAESCAAQDIRRPAVRELVADMAARDRRRTLPELHHFSRRLGVPA
>NZ_CP042266.1|WP_146481006.1|3608246_3608672_-|ATP-binding-protein
MKVHQIRFPVPGTHAAASSARRDLVAAIRAWGTLLPPELLDAAELVASELITNAVRHAGADGPISAGAHLGTGGLRIEVIDTNSEIPEAGLPGTAAEAGRGLFLVAALADRHGFDPLPSGKRCWAEFEFSAALSSAETHPM
>NZ_CP042266.1|WP_146484348.1|3606914_3608198_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MVAIRPGSPLTGSVTVDGSKNAALPLLAAAAALRRPVRLGNVPTNTDVETMLTLLQQGGWHAARSVNDPQTTLILPSDQSQPDLAPEVAARIRASYYLVPALLGACGRARLPWPGGCDIGARGMEQHFKVYERFGDRTTMDDRGYFVEATARDSGTVSVMLPFRSRGATVAALLRAVVEGRPLRLGQPNLSPEVLSVVEALRTAGWESRFGENTLSLRPPVIPSEESVSWRVPGDKIEAGTLACAVAVTGGEAQILGVRSGDLAPLVDALRLLGFPTEADDGTLTVRARGARPTGRSLQAVASLDPGALDADFEPPLMALALSLPGTHLFADAINPGRHGNLLPQLTRLGAKIHELCPTECRITGPQRLSGAGVEATDIRTGSALAIAGLTAHGVTTLGGLEQLRRGHADLPVKLHALGADICEVIP
>NZ_CP042266.1|WP_146481005.1|3605700_3606918_-|bifunctional-metallophosphatase/5'-nucleotidase
MNRQLRQIVATTDVHSAIGSAAPMLAFLHNARANSLIVDSGDFFEGTGIYRLGRGAIERSVLTTLYDVVAPGNHGWPHYFEPELRLITVCANTTDEEGVPIFERVRIERVGGRRVAVTAVIGQQAFHAIPAGRRAGHRVTDPVRALREVMIEHHHRADSWVVMSHSGFEEDLKLARSCPFAGIVFSGHCHSDVNGPVRVGDTLVVKGRELGLGYATATPTESGWTARTRLFPSASVLPDALIGLRERISTIEQKLARPLGTVREPYRDIPLDRRRLLEEITAYLRAGSAADAVVLNETALRSIPLGSTLTLGDLLAVEPFDNTLVHAVLPDEHAQALDALAERVGPLAVLPNPLPPNPRSVLTTDYLAQSHLGGRTSATGLRLGHTVRRLLTTPERTSRPEGGRR
>NZ_CP042266.1|WP_146481004.1|3605164_3605704_-|dCTP-deaminase
MILTGPEINSAVADGRVRIVPFAPDQTNPNSYNIRLGPTLLTYTSEVIDSHRANPTRSVPIDKAGYVLQPGELYLGHTVEEVGSDLFVPLLFGRSSVGRLGLFVEITAPIGDIGFHGQWTLMLSPVRPLRVYAGMKIGQVMFFAATGAVAPYHGKYQGAAGPQPSQYWRDTAGVEAVPS
>NZ_CP042266.1|WP_146484349.1|3621504_3622083_-|hypothetical-protein
MSVPVRVAAAFAVTLALAASAGCMSVGDDERAEPAPSGSPDRRDTVADPDGGYERPGGGRHAGGAGRHPDSGKSGDRGRKDGRPEVSPSPGASAEPADDRPGPGAERPRPQPGGPKPPAPRPTPPAAEPTPPPVDPPVEEPTDPPVSEPPQPTDPPSASSAPEVHAGAMRLVDADGRGMRGRPEASPQPGPA
>NZ_CP042266.1|WP_146481014.1|3622333_3622696_-|CrcB-family-protein
MSWLLVALGAAVGAPLRYLTDRAVQSRHESAFPWGTFTVNAAACLVLGATAGAAVSTELYALLGTGLCGALSTYSTFSYETLRLAETGRWPLAAANAAGSVLVGTGALVLGAELAGAVRG
>NZ_CP042266.1|WP_146481015.1|3622692_3623205_-|CrcB-family-protein
MNPAPPGAGGEPVPVDPDVDLHVPAQRAETAGARLLLVLAAVAAGGVIGALARYAAVRAWPGDPASAPLVTLGINVLGSFLIGVLMVPVAEGHGRWSPHPLLRPFAGTGVLGGFTTFSAYALDARDLLARGEGAAAFGYVAGTLAGCLGAVWAAVALTRWALTGRPGAGR
>NZ_CP042266.1|WP_006348244.1|3623425_3623776_+|metallopeptidase-family-protein
MLEMTREAFEELVSEALDSIPPELTRVMDNVAVFVEDEPDPSDPELLGLYEGTPLTERGEWYAGVLPDRISIYMGPTLRYCETPEDVVHEVAVTVVHEIAHHFGIEDDRLHELGWG
>NZ_CP042266.1|WP_146484350.1|3624102_3625818_+|hypothetical-protein
MPVGKGLRGRIRTATARLRTAAARIPTRPPTRLPKAAAPRRTAAAPSLRHPAPRPWARACGLAVVAGLGAWLGLLVVGSVHTQVGPMETSMALRPDLTGGTRINVSPLGALELASHTAPLRLDVEVEQLDPARSSALVEHPERLSGLEDEVAADIVAGTTELALRSCAAVVSGATALGLAVYRRPRRALAAGGLALALLAASTAAAAATWNPRSVLEPRYSGLLTSAPSLIGNARSIVTEFDVYQQELARLVTNVTKLYDATSTLPAFRPDPGSIRVLHVSDLHLNPAAWHIIASLVTQYRIDVIVDSGDTMDHGSAAENAFLDPIRDLDAPYVWVRGNHDSRTTQAYLSRMKNVTVLDEGRAATVGGLRIAGTGDPQFTPDRSVAARGAPAERLAGIRLASAIRDQARAGTPVDLAVAHNPDAARETDGTVPLVLAGHLHRREVEVMRFGTRLKVEGSTGGGGLRAVQNEKPEKVRASVLYLDRTTKRLQAWDEITLGGLGLTTAEVGRHLPEENKPGAKPSPGPFAEPSSSAGPRPAADPVGKPSPGPSPAAPATPSRGPSGAARSAVP
>NZ_CP042266.1|WP_146481016.1|3626262_3627111_-|cytochrome-c-biogenesis-protein-CcdA
MTEIGYLAAFLGGLLALISPCSALLLPAFFAYSLDSTGRLLARTGIFYAGLATTLVPLGVAGSYAARFFYGNRDLLVAVGGWLIIALGVAQLLGLGFASRRLAALSGRIRPTTAASVYALGLVYGFAGFCAGPILGSVLTVAAFSGNPVYGGLLLAVYALGMAVPLFFLALLWDRFDLGRRRWLRGRGFSVGRFRLHTTSLLSGLFFVLLGVLFLVFDGATALPGLVSVDRSFAAEQWAGEVGAAVPDWVLLVGVVAVAGAVLVVRAARRRTPATAADAEEA
>NZ_CP042266.1|WP_146481017.1|3627107_3627926_-|thioredoxin-domain-containing-protein
MPSIPATQRKPLLIGAGVLTAALVLGIASYTATRPEDPAATVKATGTASPAASRPGEAPATVEEKTGAYPELEKLARREAGDGLAVGRADAPVVMIEYADFQCGFCGKFARDTEPELIKKYVDQGKLRIEWRNFPIFGEPSENAARGAWAASRQGKFWEFHAAAYAKGAKEKGFSADRVKQLAEQAGVPDPERFATDLESDAAKRSVKRDQDEAYALGATSTPSFLINGRPIAGAQPEQTFTDAIESALKSAGGTGAAKSGGSAAPGDGSGS
>NZ_CP042266.1|WP_146481018.1|3628013_3628400_-|hypothetical-protein
MPPPQSRPGRVRPRPAALGVLVAVLLALCPVFGVAGAAHAAQEHADRTVVTAPEGAAGCGNGSGGGERDAQPATPPRGAASHEPPPAPYEPHSGTAPHSRAAAAPGPVADGRPPPIPGSPEERSILRV
>NZ_CP042266.1|WP_146481019.1|3628509_3632499_+|ATP-dependent-RNA-helicase-HrpA
MRSPSVSRGCDAGGRMSTSFADLQTLLAEAPLRDAHRLGRRLEGARRIRKPEARQAVLDEIAAEAEKAAARTAARAGRVPEVTYPEQLPVSRKRDEILEAIRDHQVVIVAGETGSGKTTQIPKICLELGRGVRGMIGHTQPRRIAARTVAERVAEELRTPLGEAVGWKVRFTDQVNQDATFVKLMTDGILLAEVQTDRELRAYDTIIIDEAHERSLNIDFLLGYLAQLLPRRPDLKVIITSATIDPERFSRHFGDAPIIEVSGRTYPVEVRYRPLLEEDTEESAESDRDQITAICEAAEELMAEGKGDILVFLSGEREIRDTADALNKRNYRFTEVLPLYARLSHAEQHRVFQPHTGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSHRTKVQRLPIERISQASANQRKGRCGRTSDGICIRLYSEDDFDARPEFTDAEILRTNLASVILQMTAAGLGDIEKFPFIDPPDHRNIRDGVQLLQELGAFDSEQKGSRGKAGQHLTPLGRKLSQLPVDPRLARMVVEAEKNGCVREVMVIAAALSIQDPRERPADKQTQADQQHARFKDETSDFLAFLNLWRYVREQQKERGSASFRRMCKQEYLNFLRIREWQDIYAQVRQVAKSMGIHVNEEDGPESGVHVSLLAGLLSHIGLKDTDSKNEYLGARGAKFAVFPGSALFKKPPRLVMSAELVETSRLWARVNAKIEPEWVEPLAQHLLKRTYSEPHWEKDQAAVMAYEKVTLYGVPIVAQRKVNYGRIDPETSRDLFLRNALVEGDWRTHHKFFADNRRLLTEVEELEHRARRRDILVDDETLFDFYDQRVPAHIVSGAHFDSWWKQKRQEEPELLDFEREMLINEKAGAVTKDDYPDSWRQGRLKFRVTYQFEPGADADGVTVHIPVQVLNQVTDEGFDWQIPGLREEVVIELIRSLPKPVRRHYVPAPNYAKAFLERAVPLQEPLTATLARELKQLVGVPVDAEDFDLSKVPDHLKITFRIVDERRRRLAEAKDLESLRVKLRPKARQALSQAAAGAAGPTGESIERTGLTDWTIGALTKVFETRRAGQPVKAYPALVDNGDTVSVRLFDTEAEQRAAMWRGTRRLILRNIPVNPAKFASDKLTNPQKLALSSNPHGSNQALFEDCATAAADKLIADHGGPAWDEESYRKLYEAVRADLVDVTVRTVSQVQQVLAAWQACERRLKATTSPALAANVADVRRQLDVLMPAGFVTLTGLGRLPDLMRYLVAADRRLTQMPSAVQRDTSRMEKVQDMQDEYAWLLEQLPQGRPVPKSVLDIRWMIEELRVSYFAHALGTAYPVSDKRIVKAIDAAAP
>NZ_CP042266.1|WP_003949541.1|3633519_3633726_-|developmental-transcriptional-regulator-BldC
MTARTPDAEPLLTPAEVATMFRVDPKTVTRWAKAGKLTSIRTLGGHRRYREAEVRALLAGIPQQRSEA

Crispr_ID: NZ_CP042266_11

• CRISPR_ID: NZ_CP042266_11
• CRISPR_location: 3909244-3909337
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP042266_11

Consensus_repeat	Method
TCGACCGGTCCGTCCTCCGTCAC	CRISPRCasFinder

spacers of NZ_CP042266_11

>11.1|3909267|48|NZ_CP042266|CRISPRCasFinder
ATCGACCGGTCCGTCCTCTGTCACATCGACCGGTCCGGCTCTGTCATG

CRISPR arrays and Neighbor proteins around NZ_CP042266_11

CRISPR arrays

The CRISPR arrays of NZ_CP042266_11

>merge|NZ_CP042266|11|3909244-3909337|CRISPRCasFinder
TCGACCGGTCCGTCCTCCGTCACATCGACCGGTCCGTCCTCTGTCACATCGACCGGTCCGGCTCTGTCATGTCGGCCGGTCCGTCCTCCGTCAC

>NZ_CP042266|11|9|3909244-3909337|CRISPRCasFinder
TCGACCGGTCCGTCCTCCGTCAC	ATCGACCGGTCCGTCCTCTGTCACATCGACCGGTCCGGCTCTGTCATG
TCGGCCGGTCCGTCCTCCGTCAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146481205.1|3908524_3909067_-|DUF2587-domain-containing-protein	unknown	unknown	gnl|CDD|378489
NZ_CP042266.1|WP_146481201.1|3902052_3903042_-|hypothetical-protein	unknown	unknown	gnl|CDD|316504
NZ_CP042266.1|WP_146481208.1|3913340_3913994_-|PadR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|367559
NZ_CP042266.1|WP_146481197.1|3898458_3899109_+|Ion-channel-protein	unknown	unknown	gnl|CDD|367001
NZ_CP042266.1|WP_146481210.1|3915157_3917044_-|protein-kinase	unknown	unknown	gnl|CDD|270916
NZ_CP042266.1|WP_146481199.1|3900311_3901283_-|DUF4231-domain-containing-protein	unknown	unknown	gnl|CDD|379418
NZ_CP042266.1|WP_146481212.1|3919191_3920229_-|phosphotransferase	unknown	unknown	gnl|CDD|270702
NZ_CP042266.1|WP_146481215.1|3923542_3924523_+|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl|CDD|223101
NZ_CP042266.1|WP_146481209.1|3914115_3914805_-|hypothetical-protein	unknown	unknown	gnl|CDD|236090
NZ_CP042266.1|WP_146481213.1|3921266_3921947_-|response-regulator	unknown	unknown	gnl|CDD|225107
NZ_CP042266.1|WP_146481211.1|3917504_3919139_+|protein-kinase	unknown	unknown	gnl|CDD|270916
NZ_CP042266.1|WP_146484385.1|3906149_3907376_-|MFS-transporter	unknown	unknown	gnl|CDD|340863
NZ_CP042266.1|WP_146484386.1|3920244_3920637_-|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl|CDD|378988
NZ_CP042266.1|WP_146481207.1|3912238_3913015_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213222
NZ_CP042266.1|WP_146481200.1|3900901_3902053_-|hypothetical-protein	unknown	unknown	gnl|CDD|132848
NZ_CP042266.1|WP_146481198.1|3899175_3900153_+|zinc-binding-dehydrogenase	unknown	unknown	gnl|CDD|176180
NZ_CP042266.1|WP_146481204.1|3907461_3908469_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|238042
NZ_CP042266.1|WP_146481214.1|3922331_3923540_+|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	unknown	unknown	gnl|CDD|213783
NZ_CP042266.1|WP_146481202.1|3903038_3903791_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146481203.1|3903932_3905786_-|Hsp70-family-protein	unknown	unknown	gnl|CDD|212671

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146481205.1|3908524_3909067_-|DUF2587-domain-containing-protein	gnl|CDD|378489	pfam10759, DUF2587, Protein of unknown function (DUF2587). This is a bacterial family of proteins with no known function.	2.92972e-92
NZ_CP042266.1|WP_146481201.1|3902052_3903042_-|hypothetical-protein	gnl|CDD|316504	pfam13990, YjcZ, YjcZ-like protein. This family of proteins is functionally uncharacterized. The family includes the YjcZ protein from E. coli. This family of proteins is found in enteric bacteria. Proteins in this family are approximately 300 amino acids in length. There are two conserved sequence motifs: FGD and MPR.	0.00315133
NZ_CP042266.1|WP_146481208.1|3913340_3913994_-|PadR-family-transcriptional-regulator	gnl|CDD|367559	pfam03551, PadR, Transcriptional regulator PadR-like family. Members of this family are transcriptional regulators that appear to be related to the pfam01047 family. This family includes PadR, a protein that is involved in negative regulation of phenolic acid metabolism.	8.08762e-14
NZ_CP042266.1|WP_146481197.1|3898458_3899109_+|Ion-channel-protein	gnl|CDD|367001	pfam02254, TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.	1.69261e-24
NZ_CP042266.1|WP_146481210.1|3915157_3917044_-|protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.01124e-122
NZ_CP042266.1|WP_146481199.1|3900311_3901283_-|DUF4231-domain-containing-protein	gnl|CDD|379418	pfam14015, DUF4231, Protein of unknown function (DUF4231). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 148 and 288 amino acids in length.	9.15234e-07
NZ_CP042266.1|WP_146481215.1|3923542_3924523_+|alpha-ketoacid-dehydrogenase-subunit-beta	gnl|CDD|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	2.19448e-157
NZ_CP042266.1|WP_146481209.1|3914115_3914805_-|hypothetical-protein	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.76945e-07
NZ_CP042266.1|WP_146481213.1|3921266_3921947_-|response-regulator	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.78785e-64
NZ_CP042266.1|WP_146481211.1|3917504_3919139_+|protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.57433e-120
NZ_CP042266.1|WP_146484385.1|3906149_3907376_-|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.84241e-31
NZ_CP042266.1|WP_146484386.1|3920244_3920637_-|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl|CDD|378988	pfam12900, Pyridox_ox_2, Pyridoxamine 5'-phosphate oxidase. Pyridoxamine 5'-phosphate oxidase is a FMN flavoprotein that catalyzes the oxidation of pyridoxamine-5-P (PMP) and pyridoxine-5-P (PNP) to pyridoxal-5-P (PLP). This entry contains several pyridoxamine 5'-phosphate oxidases, and related proteins.	2.27507e-12
NZ_CP042266.1|WP_146481207.1|3912238_3913015_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	3.60271e-105
NZ_CP042266.1|WP_146481200.1|3900901_3902053_-|hypothetical-protein	gnl|CDD|132848	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	2.77029e-34
NZ_CP042266.1|WP_146481198.1|3899175_3900153_+|zinc-binding-dehydrogenase	gnl|CDD|176180	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
NZ_CP042266.1|WP_146481204.1|3907461_3908469_+|helix-turn-helix-domain-containing-protein	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	8.64763e-09
NZ_CP042266.1|WP_146481214.1|3922331_3923540_+|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	gnl|CDD|213783	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit. Members of this protein family are the alpha subunit of the E1 component of pyruvate dehydrogenase (PDH). This model represents one branch of a larger family that E1-alpha proteins from 2-oxoisovalerate dehydrogenase, acetoin dehydrogenase, another PDH clade, etc. [Energy metabolism, Pyruvate dehydrogenase].	0
NZ_CP042266.1|WP_146481212.1|3919191_3920229_-|phosphotransferase	gnl|CDD|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	3.51621e-29
NZ_CP042266.1|WP_146481203.1|3903932_3905786_-|Hsp70-family-protein	gnl|CDD|212671	cd10229, HSPA12_like_NBD, Nucleotide-binding domain of HSPA12A, HSPA12B and similar proteins. Human HSPA12A (also known as 70-kDa heat shock protein-12A) and HSPA12B (also known as 70-kDa heat shock protein-12B, chromosome 20 open reading frame 60/C20orf60, dJ1009E24.2) belong to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly, and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). No co-chaperones have yet been identified for HSPA12A or HSPA12B. The gene encoding HSPA12A maps to 10q26.12, a cytogenetic region that might represent a common susceptibility locus for both schizophrenia and bipolar affective disorder; reduced expression of HSPA12A has been shown in the prefrontal cortex of subjects with schizophrenia. HSPA12A is also a candidate gene for forelimb-girdle muscular anomaly, an autosomal recessive disorder of Japanese black cattle. HSPA12A is predominantly expressed in neuronal cells. It may also play a role in the atherosclerotic process. The gene encoding HSPA12B maps to 20p13. HSPA12B is predominantly expressed in endothelial cells, is required for angiogenesis, and may interact with known angiogenesis mediators. It may be important for host defense in microglia-mediated immune response. HSPA12B expression is up-regulated in lipopolysaccharide (LPS)-induced inflammatory response in the spinal cord, and mostly located in active microglia; this induced expression may be regulated by activation of MAPK-p38, ERK1/2 and SAPK/JNK signaling pathways. Overexpression of HSPA12B also protects against LPS-induced cardiac dysfunction and involves the preserved activation of the PI3K/Akt signaling pathway.	2.14587e-88

Protein sequences

>NZ_CP042266.1|WP_146481205.1|3908524_3909067_-|DUF2587-domain-containing-protein
MDMPRNERSQESPHVLVVGQDGMALGGGDGNGDDEFREVPVTDMVEQPAKVMRIGSMIKQLLEEVRAAPLDEASRVRLKEIHASSVKELEDGLAPELVEELERLSLPFTNEAVPSEAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLEQMRRALPPGAPHDDDPAHGALRSGPYL
>NZ_CP042266.1|WP_146481204.1|3907461_3908469_+|helix-turn-helix-domain-containing-protein
MGLWQIGTDTLAGGRFALSPFAETFASLRLLHTGSGAHPGEEAWLRAHLPGYRARLAADPVTALLVQAAFGMAWNADFCCPAPGVGESFEETVDRVAAAGAGKARADLRVALRGPLPAALERDDLPERAAVLLTYVWEETVRPYWERRRRVLEADVVARTARVGRGGWAAVLNSLRPGTRWLGESRFQVNAWAYPPREIAAGAELLFIPVTPGTGWVSWEEQERYAVVYPCSGVLAEDHHRRPVPAGLGALVGTARAGLLALLGTPMSTTQLTALTGQGLGSVGRHLRILLEAGLVERQRAGRSVLYVRTAAGEVLVEASGAGTPGHHGPGPGRC
>NZ_CP042266.1|WP_146484385.1|3906149_3907376_-|MFS-transporter
MFRTPEYTPFLLSFATSGAAQTIGGLALGTMVFRATGSPLLSAVSMFGPQLAQLLGAAFLLSAADRLPPRALLTALALAFAASTAVLALPGLPILVVFTVVLLQGLVASLGGGARGGLLNEILSKDGYVLGRSVYNMSWGLMQMAGSATGGALLVLLSPGACLIIAAALHLLTALVTRLGLTARPPRSAGRPSVSATWRANALLWSSRPRRLTYLGLWVPNGLVVGSASLYISYAPGAAGTLYACAALGMFLGDLVVGRLVPPALRPRLTVPLRLLLAAPYLFFVLRPGVAPAALAVTVASIGYAASLILQERLISLTPDDLTGQALGLHGTGMAACQGIGAVLAGTVAQLTSPATAMTLMAAGSVAVTLTLAALGGRTERRSTAPGTRPGGRPEPAPGGEEPAVADQ
>NZ_CP042266.1|WP_146481203.1|3903932_3905786_-|Hsp70-family-protein
MGKSAVRDPFVPKIVVAIDFGTHGSGFAWATVSDLQDLAKHRSIVYKDFTAQGGSNSYPKDLTTVLVDVHGEAVAFGFEARRRWQAESRGNPNGFGYAARFKMALRADAPPADVPRFLGSLAGADHTVVRKLIAAYLRRLYTTALQEIEATSFGGIGFSAQHIRWCITVPAIWTDSEKRAMRDAAKAAGIPSDEERLLLVSEPEAAAVYCALTSGTLLEPDRPEGRLSVETPGSRFMVVDCGGGTVDITSYQIRPEGVGDDRLAEIGIADGGRLGSAYINQHFVDEVLGDRFGDEELKALLVSHPQEIAALEDRWEGWKVGLHSETGPDGTPVFTMPCDIEVPGRLWEALSQPTRERLTELAYGEPYHLVILPHEIAALHESVVGRILETIEGQRRIVLDNGPVKGVDQIIMVGGFARSTYLRDRIAQRFGGKVTVIMPQDPAVAVLGGAVHFAYDPAVIRGRRSKFTYGFECAMSYREGTDPEGLHFRDELGDDMCNDRFHVMVKRGAQVTVGEVVKATIRVQSSSVVFDLGLFATYSDDPQYINEAGCERVGTVTADTSGSVKVPFPKRYLDIYYTFGGTEIAIETQDRTSGVRRKATIEFTELHGRRGRDRTGG
>NZ_CP042266.1|WP_146481202.1|3903038_3903791_-|hypothetical-protein
MAAGHEWLRHQIVTELRQQTHQLMSTAASDQAAVLRAVADLNERVDAVARNVERVLDALRDQGVRNAIAGGSATSDVHRRHLDLAQDYRRLVRQEVRFLVRLLCPRLDGEGDTDLARRRAETARRLVELLFEPLDQPMARKQEQIVAELRRLGLTTEVPDFQAQFGTAFRKAATLRDAVVGLPHTGHLDFLADVTVLPPDRYEAWDGKQSDGAPPEFLIAPAYVIAGDRPQALTQPIVFVAPVIRPGAGR
>NZ_CP042266.1|WP_146481201.1|3902052_3903042_-|hypothetical-protein
MNLSDIARGVPLVDDRLLLELLNDLHTADDLVRATAREGFFARLLAQVTGRGRRRDLVVTGALVGAQRGTLAWLSDLADRLAVTDLVVAEVTDEVTRVRDRVDRLEARLQWAEGGVDGLGVVLAKLAEQTGRGLAEHDERLRRVESSLAVDRAARRWRHPRPGPNLGWLAGAILLAREVAGGPAGEFAASKPGAGVERELAERMLQDPPTPWYDDVRPLVNLLAEAARRLPSDEHRVMLAELLGEGVPAALTGARGPLSSALRKAALATTVEGVDPDAAAVAALRSAVGNGPDYVAASLSVEELVRHIIREQFAEADSRRSRLRALGSV
>NZ_CP042266.1|WP_146481200.1|3900901_3902053_-|hypothetical-protein
MTGQDDFNGLARQALELSGRSGYPRRPAPRQDPPEAPRRDPRAGPAVRRPAPPVPFAPLRIGLVLAGGGAKGAYELGVLDYLAERGTRISAIAGTSIGALNGAVLASEESLFHGVERLASFWERFSTRMGVAPSEYRGLPLDAAGVAVEGTARQMKMFRRRLTALKSRLALLEELVDQAVDAERITAGRPLWVTAYPLMDRQAVPEQLRYLAEFARWMGGARAGIIRLNDLAPPQIREAVLASAALPFVFPTRVIDGCAYLDGGLGRGDRTPVRAFAEEEHCDVLVVVHLHPDARVVPGAATGLVRVDIRPSLPLTPPGPLGPLTALMSFSPERVDALRALGYRDAAARFGETEKLLESRRFLDDAESTMLSALRRLRSATPP
>NZ_CP042266.1|WP_146481199.1|3900311_3901283_-|DUF4231-domain-containing-protein
MRVPRRRSGPRGPDSGTGVRRGGALRRSRRRASAPGRPGRTGRGDRPRPGRHPAQPPAHPARSARATDRSHVLLTRTRGRAAGTRLPRRRGTLRRDREAAGKPQIPRRRRVHDAVRPETAAERNTAVNHGPAPSLRPGRPGFRPAPGDPVHETGTRRRPASTTPRLLETDTDFATSVEVYVRELIDFYDRRAHRNRRFYRASGVVTILSAAALPLLTILDLPYKNVVISGVGCLVAISTALKEFYRWDTSWVLLRQTETDLTRAYATYASAKATAGGRPDPGAAHELVAQILRIREEESLRFFRNLPSPGEVPPQLQRPATGT
>NZ_CP042266.1|WP_146481198.1|3899175_3900153_+|zinc-binding-dehydrogenase
MHAITIPEPGGPEALVWAEVPDPVPGEGELLVEVAASGVNRADLLQRQGRYDPPPGASPYPGLECAGRVVGIGPSVSGWTLGEEVCALLAGGGYAEKVAVPAGQVLPVPKGVDLATAAALPEVTATVWSNMFMVAQLRPGETVLVHGGASGIGTMAIQLAKAVGARVAVTAGSPEKLARCAELGADILIDYRRQDFVDELRRATNGDGADVVLDIMGAEYLDRNVRALAVNGRLAVIGLQSGVKGELNLATLLGKRAAITATSLRARPLKEKAAIVAAVREHVWPLVESGRVRAVIDREFPLRDAAAAHEALDSGTHVGKLLLRT
>NZ_CP042266.1|WP_146481197.1|3898458_3899109_+|Ion-channel-protein
MRDHTIIVGFGTKGRSALQTLMATGLRKDQVIVVDPSSKVIESAAAEGIEGVVGDATRSGVLLRAEVQRARQIVIATQRDDTAVLVTLTARQLNRQTKIVAAVREEENGPLLRQSGADTVITSASAAGRLLGLSVLSPSAGAVMEDLIHQGSGLDLVERPVIKAEVGRDVRDTGDLVVSVLRGHRLIGYDDPAASPLQLTDRLITIVRAGSAEGDG
>NZ_CP042266.1|WP_146481207.1|3912238_3913015_-|ATP-binding-cassette-domain-containing-protein
MSTTSPQQSHQTHASQPNQPVLQLVQLTRVHGSGATEVHALRGVNLDVFPGELVAVMGPSGSGKSTLLTLAGGLDLPTSGQVIVEGTDITTANRKTLAALRRRSIGYVFQDYNLIPALTAAENVALPRELDGTSARKAKTEALAALEEMDLGHLAERFPDEMSGGQQQRVAIARALVGDRRLVLADEPTGALDSETGESVLALLRSRCDAGAAAVLVTHEPRFAAWADRVVFVRDGSVVDQTVRSDADSLLTGQAADR
>NZ_CP042266.1|WP_146481208.1|3913340_3913994_-|PadR-family-transcriptional-regulator
MSIRHGLLALLEHGPRYGSQLRTEFEARTGSTWPLNVGQVYTTLNRLERDGMVAQSGEDDAGHALYAITEAGRSELKTWFEAPVDRSSPPRDELSIKLAMAIGAPGVDIRKVIQSQRHHTVKAMQDYTRLKMQALAAIESGEGPEERNDIAWLLVLEQLIFQTEAEARWLDHSEARLIRLSATADRRAANDRKAAQRTAEEKVPAPSALHRADTRPN
>NZ_CP042266.1|WP_146481209.1|3914115_3914805_-|hypothetical-protein
MHPTLRSRCAITVAALAVLATPLTYPNEPGPLTGTAAAAPADPGSPGTAVPPDGTGPAPAAAVSGPGAAAPAPDPHESLAGHPAGEGRIRPGRPPHHIPPRPRDETDGPSPKASVSQSGTGTPSGPPSVTGTGDPSAAPVRQDPDAPAADGDLLPPEGTDGTDGWRGDDDPAAEPTPYLTGDAPSAAGQRRAGAGGTRAAHEFSPLSLGVGLALMGLGIGFLGLRLRHR
>NZ_CP042266.1|WP_146481210.1|3915157_3917044_-|protein-kinase
MSQDGAQGHHVGGSVANGRYRLHDLLGQGGMASVHLAHDTVLDRQVAIKTLHTELGREPSFRERFRREAQSVARLSHTNIVSVFDTGEDELSGALVPYIVMEYVEGRPLGSVLQEDIQRYGAMPADQALRVTADVLAALESSHENGLVHRDIKPGNVMLTRRGVVKVMDFGIARAVQSGVTSMTQTGMVVGTPQYLSPEQALGRGVDARSDLYSVGIMLFQLLTGRLPFDADSPLAIAYAHVQEEPVAPSTVNRSVTPAMDALVLRALKKNPNERFPSAEAMRNECLRVAAGGQSAAPAVVNGAGGGGSGAGVGSAVFPPHTPPQHVQGHVQGHVQGHAPAHAPVQQPHPHSPAHGIARTPYQQPVPPRPYGPQGHGQGTPPPQPPRQGMGPAPYGYPQQGGAAMGGHVPPPYASPPTARPVPVQHRPAPPARRGPGRGRKLVLVLVCLFCGFIAIQIGIGVVDSFMRDDPVDVEVVKTPTGPAGSGGSAGSGDRGTETDAGTDTGTDTGTETGTDTGSDTRSDTGSETKKPKDAIPPDRTRTIKAEKCSEASEDSSDPSKVNAPSLLYKDLLSVKDCLRAAGWTWKVTEVDNPQYPKDAVVEQFPSPDSPVSENQQFELTISTGKAG
>NZ_CP042266.1|WP_146481211.1|3917504_3919139_+|protein-kinase
MAPEPEAGVGGVPESGDHWGPGGLVGGGRYRMTYRLGRGGMAEVYAAEDVRLGREVAVKLLRADLAEDPVSKARFTREAQSVAGLNHHAIVAVYDSGEDAVGGQSVPYIVMEKVEGRTIRDLLINAEAPPAEQALIIVSGVLEALAYSHQHGIVHRDIKPANVIITNSGAVKVMDFGIARALHGASTTMTQTGMVMGTPQYLSPEQALGKAVDHRSDLYATGCLLYELLALRPPFTGETPLSVVYQHVQDVPVPPSEVLDAVPPELDGLVMRSLAKDPDDRFQSSEEMRGLVQYALQMLQQQGGHTGGWNTGPVDTFGSTTRVMGAPGGPTAVHPAVHGETSAGPILPPSNPDDGGFSGYHPKPAGRRRGRMVLFAALAVIAVVMGVAMALRAADAGNESPGDDTKVSDSPSVKTSPSPSAESKPSEKEVEDESPQWSERPKWPKNNKTYEPSKTAKPSNDVKPSNDTSEEPPTQSQDPGTEGPQQPGQPGGSDNGGQQGGNGNGGNGNGNPAGGGPGSGEQGGVQGGEAAAANGGAAQGQGST
>NZ_CP042266.1|WP_146481212.1|3919191_3920229_-|phosphotransferase
MPRSYDTAVPPVGALLRRYDNPGEPLSCEPVSEGLLNRGYRLATTRGAYFLKHHLDDDPEVIGRQHRVTQRLEPLGVPVAPPVADARGDTVAVIGGHCYALHPWVDGRHRDGAHLSTVQCRRLGALLGLVHTCLEQVMDHPPGRAAEGEAGERDGYESADPQETFFLIDELLSLIRAAGGPRDSFDVLAEHRLVERRTLLELHADLRPPPAPAGGWVHGDFHPLNLLYRGAEPAAIVDWDRLGVQPRAEEAVRAAAIFFVRPEGALELTKVRAYARAYRRAVGADTSELAAAVHRVWWERLNDFWILRWRYQRHDRRADPQFAAVSALAVWWTREYEAVREAFAT
>NZ_CP042266.1|WP_146484386.1|3920244_3920637_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MELLGRVSFGRLATSMRAMPFVAPARHIVHDGGVVLRIHRGFGYHRACNGSVVAYGADSFDRGDRSVWSVQFIGTARIVCPTDEEQRLFGPEPERADGEPFEPVFMRVEPQFVTLHTLDYSEEQPNGHAA
>NZ_CP042266.1|WP_146481213.1|3921266_3921947_-|response-regulator
MREEGKITVFLLDDHEVVRRGVHELLSVEDDIVVVGEAGTAEDALARIPATRPDVAVLDVRLPDGSGVEVCREIRSRDESIKCLMLTSFADDEALFDAIMAGASGYVLKAIRGNELLSAVRDVAAGRSLLDPVATARVLARLRDGGPKRDDKLASLTEQERRILDLIGEGMTNRAIGERLHLAEKTIKNYVSSLLSKLGMERRSQAAAYVARLQAEGRSSSTSGTH
>NZ_CP042266.1|WP_146481214.1|3922331_3923540_+|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha
MTVESTAARKPRRTGGSKRVSAAKKPQPSEPQLVQLLNPEGERVAHPDFDLDPTPEELRGYYRDMVLTRRFDAEATALQRQGELGLWASLLGQEAAQIGSGRALRDDDYVFPTYREHGVAWCRGVDPTNLLGMFRGVNNGGWDPKSNNFHLYTIVIGAQTLHATGYAMGVAKDGADSAVIAYFGDGASSQGDVAESFTFSAVYNAPVVFFCQNNQWAISEPTERQTRVPLYQRAQGYGFPGVRVDGNDVLACLAVTRWALERARRGEGPTLVEAFTYRMGAHTTSDDPTKYRADDERAAWEAKDPILRLRRHLERQGHADEAFFAALEEESDGLAKRVREAVRSMPDPDPMAMFDNVYADGHALVDEERAQFAAYQASFADAPGTATGPGTATGTGTHGEGH
>NZ_CP042266.1|WP_146481215.1|3923542_3924523_+|alpha-ketoacid-dehydrogenase-subunit-beta
MAVQKLPLAKALNESLRTALETDPKVLIMGEDVGKLGGVFRITDGLQKDFGEDRVIDTPLAESGIIGTAIGLALRGYRPVAEIQFDGFVFPAYDQIVTQLAKMHARALGAVKLPVVVRIPYGGGIGAVEHHSESPEALFAHVAGLKVVSPSNASDAYWMLQQAIQSDDPVIFFEPKRRYWDKGEVDTEAIPGPLHTARVVREGDRITLAAYGPMVKVCTEAAAAAAEDGVSVEVLDLRSVSPLDFDTIQRSVEKTGRLVVVHEAPVFYGSGAEIAARITERCFYHLEAPVLRVGGFHAPYPPARLEEEYLPGLDRVLDAVDRALAY

Crispr_ID: NZ_CP042266_12

• CRISPR_ID: NZ_CP042266_12
• CRISPR_location: 4552688-4552773
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP042266_12

Consensus_repeat	Method
GCTGTAGCTGGACTTGAACCAGT	CRISPRCasFinder

spacers of NZ_CP042266_12

>12.1|4552711|40|NZ_CP042266|CRISPRCasFinder
CGTAGGCGACTTCGACGCAGCTACTGCCGGGTTCATCGCC

CRISPR arrays and Neighbor proteins around NZ_CP042266_12

CRISPR arrays

The CRISPR arrays of NZ_CP042266_12

>merge|NZ_CP042266|12|4552688-4552773|CRISPRCasFinder
GCTGTAGCTGGACTTGAACCAGTCGTAGGCGACTTCGACGCAGCTACTGCCGGGTTCATCGCCGCTGTAGCTGGACTTGAACCATG

>NZ_CP042266|12|10|4552688-4552773|CRISPRCasFinder
GCTGTAGCTGGACTTGAACCAGT	CGTAGGCGACTTCGACGCAGCTACTGCCGGGTTCATCGCC
GCTGTAGCTGGACTTGAACCATG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146481686.1|4550515_4551379_+|NAD(P)H-binding-protein	unknown	unknown	gnl|CDD|187578
NZ_CP042266.1|WP_146481678.1|4542637_4543597_+|hydroxymethylbilane-synthase	unknown	unknown	gnl|CDD|234612
NZ_CP042266.1|WP_146481679.1|4543593_4545258_+|bifunctional-uroporphyrinogen-III-C-methyltransferase/uroporphyrinogen-III-synthase	unknown	unknown	gnl|CDD|376850
NZ_CP042266.1|WP_146481681.1|4545644_4545872_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146481687.1|4551427_4552372_-|chitinase	unknown	unknown	gnl|CDD|381595
NZ_CP042266.1|WP_146481692.1|4555173_4555812_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146481694.1|4558831_4559107_+|DUF1876-domain-containing-protein	unknown	unknown	gnl|CDD|378103
NZ_CP042266.1|WP_146481697.1|4567560_4568586_-|phosphotriesterase	unknown	unknown	gnl|CDD|238295
NZ_CP042266.1|WP_146481680.1|4545346_4545580_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146481695.1|4563389_4565165_-|arginine--tRNA-ligase	unknown	unknown	gnl|CDD|215160
NZ_CP042266.1|WP_146481690.1|4553724_4554159_+|ATP-binding-protein	unknown	unknown	gnl|CDD|340413
NZ_CP042266.1|WP_146481691.1|4554142_4555018_-|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224995
NZ_CP042266.1|WP_146484466.1|4559278_4563325_+|chitinase	unknown	unknown	gnl|CDD|225862
NZ_CP042266.1|WP_146481682.1|4546032_4546584_+|DinB-family-protein	unknown	unknown	gnl|CDD|378981
NZ_CP042266.1|WP_146481685.1|4549025_4550402_+|glutamine-synthetase	unknown	unknown	gnl|CDD|274431
NZ_CP042266.1|WP_146481689.1|4552785_4553610_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|238045
NZ_CP042266.1|WP_146481684.1|4547746_4548979_+|cytochrome-P450	unknown	unknown	gnl|CDD|225035
NZ_CP042266.1|WP_146481696.1|4565439_4567170_+|lysine--tRNA-ligase	unknown	unknown	gnl|CDD|234829
NZ_CP042266.1|WP_146481693.1|4555900_4558753_+|TIR-domain-containing-protein	unknown	unknown	gnl|CDD|225201
NZ_CP042266.1|WP_146481683.1|4546614_4547604_+|porphobilinogen-synthase	unknown	unknown	gnl|CDD|236450

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146481686.1|4550515_4551379_+|NAD(P)H-binding-protein	gnl|CDD|187578	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs. TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	6.51776e-58
NZ_CP042266.1|WP_146481679.1|4543593_4545258_+|bifunctional-uroporphyrinogen-III-C-methyltransferase/uroporphyrinogen-III-synthase	gnl|CDD|376850	pfam02602, HEM4, Uroporphyrinogen-III synthase HemD. This family consists of uroporphyrinogen-III synthase HemD EC:4.2.1.75 also known as Hydroxymethylbilane hydrolyase (cyclizing) from eukaryotes, bacteria and archaea. This enzyme catalyzes the reaction: Hydroxymethylbilane <=> uroporphyrinogen-III + H(2)O. Some members of this family are multi-functional proteins possessing other enzyme activities related to porphyrin biosynthesis, such as HemD with pfam00590, however the aligned region corresponds with the uroporphyrinogen-III synthase EC:4.2.1.75 activity only. Uroporphyrinogen-III synthase is the fourth enzyme in the heme pathway. Mutant forms of the Uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria in humans a recessive inborn error of metabolism also known as Gunther disease.	1.99689e-60
NZ_CP042266.1|WP_146481690.1|4553724_4554159_+|ATP-binding-protein	gnl|CDD|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	5.81376e-22
NZ_CP042266.1|WP_146481687.1|4551427_4552372_-|chitinase	gnl|CDD|381595	cd00325, chitinase_GH19, Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.	5.84076e-81
NZ_CP042266.1|WP_146481694.1|4558831_4559107_+|DUF1876-domain-containing-protein	gnl|CDD|378103	pfam08962, DUF1876, Domain of unknown function (DUF1876). This domain is found in a set of hypothetical bacterial proteins.	2.93623e-31
NZ_CP042266.1|WP_146481697.1|4567560_4568586_-|phosphotriesterase	gnl|CDD|238295	cd00530, PTE, Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.	1.90145e-75
NZ_CP042266.1|WP_146481678.1|4542637_4543597_+|hydroxymethylbilane-synthase	gnl|CDD|234612	PRK00072, hemC, porphobilinogen deaminase; Reviewed.	2.87257e-137
NZ_CP042266.1|WP_146481695.1|4563389_4565165_-|arginine--tRNA-ligase	gnl|CDD|215160	PLN02286, PLN02286, arginine-tRNA ligase.	0
NZ_CP042266.1|WP_146481691.1|4554142_4555018_-|NAD(P)-dependent-oxidoreductase	gnl|CDD|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	1.08395e-28
NZ_CP042266.1|WP_146484466.1|4559278_4563325_+|chitinase	gnl|CDD|225862	COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism].	1.90111e-103
NZ_CP042266.1|WP_146481682.1|4546032_4546584_+|DinB-family-protein	gnl|CDD|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	6.09125e-07
NZ_CP042266.1|WP_146481685.1|4549025_4550402_+|glutamine-synthetase	gnl|CDD|274431	TIGR03105, gln_synth_III, glutamine synthetase, type III. This family consists of the type III isozyme of glutamine synthetase, originally described in Rhizobium meliloti, where types I and II also occur.	9.85093e-87
NZ_CP042266.1|WP_146481689.1|4552785_4553610_-|helix-turn-helix-domain-containing-protein	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.32645e-10
NZ_CP042266.1|WP_146481684.1|4547746_4548979_+|cytochrome-P450	gnl|CDD|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.531e-65
NZ_CP042266.1|WP_146481696.1|4565439_4567170_+|lysine--tRNA-ligase	gnl|CDD|234829	PRK00750, lysK, lysyl-tRNA synthetase; Reviewed.	0
NZ_CP042266.1|WP_146481693.1|4555900_4558753_+|TIR-domain-containing-protein	gnl|CDD|225201	COG2319, COG2319, FOG: WD40 repeat [General function prediction only].	2.07263e-18
NZ_CP042266.1|WP_146481683.1|4546614_4547604_+|porphobilinogen-synthase	gnl|CDD|236450	PRK09283, PRK09283, porphobilinogen synthase.	0

Protein sequences

>NZ_CP042266.1|WP_146481687.1|4551427_4552372_-|chitinase
MLTQRTRNRLKALVVAVTATAGLVTIGLVPNSAAAATPKAKTAAAADACTTAPNWQQGTYYNAGAIVKYRDGNYYIAEHANPGYDPTVSTWFWNPHTCNPGGENPGEPGPFVVSQAQFNQMFPNRNPFYTYAGLTAALSAYPGFTNTGSDTVKKQEAAAFLANISHETGGLYYVVEQNTANYPHYCDRNQPYGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGINLLQNPSLVQTDAAVAWKTALWYWNTQNGPGTMTGHAAMVNQAGFGQTIRSINGSLECNGGNPAQVQSRVNNYTRFTQLLGVPTGANLYC
>NZ_CP042266.1|WP_146481686.1|4550515_4551379_+|NAD(P)H-binding-protein
MTILVTGATGNIGRLVVRELAGRGVPSRALTRDPAKAAGFPAGVEAAVGDLARPESLADALKGVDRLVLFPYPDTAEEVVALAKAAGVRRIVVLSSAAVTSGYDTTFHLPVERAVEASGLEWTFIRPGEFAANKLELWGPSVRSERTVYDASPDWAASPVHEADIADAIVTALLADGHTGRAYTFNGPESLTVREQVALLSRALGESIRVEEVTPLELRERYLAQGGFAAASADFMLGFETYDGEVVDEEPDLDLSEALVDASAEIVTGRPARTFGEWARENAKAFW
>NZ_CP042266.1|WP_146481685.1|4549025_4550402_+|glutamine-synthetase
MSTTALDRHREQNTDQEAVGALRARIAAAGVEYIYYQSVTLGGRVVGKVVPAVHLLRSLEKGVQLHRTVAADIQADRNGTLLGGGPRAAEFTALPDLDTFAVLPWDTSVARFFCRTYEPAHQPECGGAPFAADVRGHLIRRHREFTERTGLVLRSGCEPEVTWTGPGLEVVPRPDACPAYQIDLLERSRPIYQKVISYGRALGLDMIEGDYEDPGQLELNWMYDRAELTADRLITFRQICRQVSRELGVTVSFMPKPATGVMGNGCHHNLSLWRGDENVLAEPGRRELHLSETGRHALGGLLAHAAGAMAVMGSTVNSYKRYRDAGLFAPERIDWGMDDKTCTVRLSANGRLELKLPDAMVNPYLSHAVLLAVISDGLANRIDPGPPQGTGGEAGDRFPALPATLGEALTAFAGDAVVRGGLGEETAALYLALKGDEWARFCAAVTDWEHLMYADGTP
>NZ_CP042266.1|WP_146481684.1|4547746_4548979_+|cytochrome-P450
MEGAAPTDGVPWFDVTGPDFAITSAAVHAARERSWYARTEYGLAVLRHAETEELLKHPLLRQGSVSWLARNGVTEGPLADWWASWVLHQEGAEHRRLRRLMNPAFSARAATALLPRFRALAGELTDVFADRGGCEFVAEFAEPYAARVIAVLLGLPEPEWPVVARESGVLGLAMTVNVRRDLDRIERALAALYAYADELIADRRRRERDDFVSRLVRAGGPAADRGRDRDRDRLSDAELRDGLVLLIFGGFDTTRNQLGLALRTFARHPAQWRLLAERPELGAAAAEEVMRVNPTVRWITREALADFTFQGLDIPAGTTVQLWSESAGTDPRAHGPYSFDITAERAPHFGFGGGVHHCLGHFVARGDMAEALPVLARRLRDLRIGEGAVQLPDSGNTGPVRLPLLFTPAP
>NZ_CP042266.1|WP_146481683.1|4546614_4547604_+|porphobilinogen-synthase
MSTYGSFPGSRPRRLRTTPALRRMVAETRLHPSDLILPAFVREGVSEPVPISAMPGVVQHTRDTLRKAAVEACAAGVAGIMLFGVPEDSKKDGAGTAGTDPDGILQVAIRDVRAEVGDELVIMSDLCLDEYTDHGHCGVLDAEGRVDNDATLERYAEMAQVQADAGVHVVGPSGMMDGQVGVVRDALDTIGKEDVSILAYTAKYSSAFYGPFREAVGSSLRGDRKTYQQDPANVRESLRELALDLEEGADMVMVKPAGPYLDVLAKVAESVSVPVAAYQISGEYAMVEAAAEKGWIDREKAILETLTGIRRAGAKMILTYWATEVARGL
>NZ_CP042266.1|WP_146481682.1|4546032_4546584_+|DinB-family-protein
MTTDAPAPSARSALLAGQLDLVWALFEHHLPGLDFDDHLWEPAPGAWTVRPDGAGRWVPDWQMPEPDPVPTTSIGWLTWHIDYWWTVTHRHCFGDGAPAREEIFWPGSAGAAAARLRGLKDEWRAELVKRTDDELDATERTAGLPLFGDTVLTLAETASWVNFELAKNVSEIGLTVRLRRART
>NZ_CP042266.1|WP_146481681.1|4545644_4545872_-|hypothetical-protein
MAVFSEGTTFRGMADYPGGNDGYVTLTFSVDNTITTPVSTLTPLEIANAISAAAQAKGYPKIVFSGPPAPVQVNP
>NZ_CP042266.1|WP_146481680.1|4545346_4545580_-|hypothetical-protein
MAVFDDGTTFNATAEYGTGVDPGWVGVTFSVSNNLQLPGVPPVTALEVAGALNALVQGKGYRKLVFTGPQALATLNP
>NZ_CP042266.1|WP_146481679.1|4543593_4545258_+|bifunctional-uroporphyrinogen-III-C-methyltransferase/uroporphyrinogen-III-synthase
MSPTTNLSTAYDSAHGHVTFLGAGPGDPGLLTLRAVEALAGADVLIAEPDVLDVVRGHARASVSTPELTVIDDASTAAGIPVLRDAVNLVMEAARSGRRVVRAVTGDPGLDADAGHEMLACAAEGIPFEVVPGIAAAVGVPAYAGVPLRDAQGADVRFVDARTASERCWSEVGASDGTVVVSTTLDAVAAAAGELVAAGRKPDTPLTVTVAGTTTRQRTWAATLGTIAQVFKQGKVLPSPEGHRPVIAVVGERSAPAQRDQLAWFESKPLFGWKVLVPRTREQAASLSDQLRSYGAVPHEVPTIAVEPPRTPQQMERAVKGLVTGRYEWIAFTSVNAVKAVREKFEEYGLDARAFAGIKVAAVGEQTAKALIDFGVKPDLVPSGEQSAAGLLEDWPPYDPVFDPIDRVFLPRADIATETLVAGLIELGWEVDDVTAYRTVRASPPPAETREAIKGGGFDAVLFTSSSTVRNLVGIAGKPHNVTVIACIGPATAKTAEEHGLRVDVLSPEPSVHRLAEALADFGAGRRAAAVEAGEHVTRPSERRPGGRRRRTTT
>NZ_CP042266.1|WP_146481678.1|4542637_4543597_+|hydroxymethylbilane-synthase
MTERALRLGTRRSKLAMAQSGQVARAVEALTGRSVELVEITTYGDTSREHLAQIGGTGVFVAALREALAAGEVDFAVHSLKDLPTAQPDELVLAAIPKREDPRDVLIARDGLTFDRLPEGARVGTGSPRRAAQLNAYARAHHTRIETVPIRGNVDTRIGFVHSGELDAVVLAAAGLNRMGRSAEVTDFLSVDFVLPAPGQGALAIECPAHDTELIAVLAELDDPVTRVAVTAERSLLAALEAGCSAPVGALADLLGDGQAVTEMRLRGVVGTTDGVTLVQLSVTGPVPTSHGDAIALGRELASEMLAKGAAGLMGERAS
>NZ_CP042266.1|WP_146481689.1|4552785_4553610_-|helix-turn-helix-domain-containing-protein
MYTRKQQRKNASALRLVGKQVALFRKAAGLTQEQLAEHLGISLETVASIEQGRRALKLDYAERLDELLDTKGALVVAVQNMPEIDMIPAWAEQYMDMEQEALTLSYYENQLVPGLIQTPDYARAIFRCRVPAYSTDEIDRLVMKRMERQGILHRDSPTTISFIFSEAALRDRLGGDEVYTACLTHLRTCADLPGINIQILPLGTKGHAGLNTPYILVETPDYQDLAYVETHRGNQQVCNPDEVSILKQKYAMLRTQALNSDQTKGLLDRLLGER
>NZ_CP042266.1|WP_146481690.1|4553724_4554159_+|ATP-binding-protein
MNVLSPPPSFPVLRERFYPRARQTVPAAREFVRGIVREWVPAARLDDVLVCVSELTTNAVLHGVPPGRGYRVRVCRFPDGLLRVEVHDSGDGFTLPPVPGPAAEPEGESGRGLLIVDALADKWGVGDRLPGKVVWCEFGVSGAG
>NZ_CP042266.1|WP_146481691.1|4554142_4555018_-|NAD(P)-dependent-oxidoreductase
MSAAKPAVSVLGLGMMGSALAAALLKAGYPITVWNRTAAKTGPLVAQGAAPAADVAEAVEAGELLVLTLTANDAVRELLEPLADRLRGRTIANLTNGTPAQARELAAFAAEHGARYLDGGIMASPQMIAGPHAYIYYSGDQEAFGEYEDTFRVLGGARYVGEDAGRAAVHDFALLIGMYGQGIGTMHAFALAKAVGIPAKEIAEPLRDWLNAMALYIMEEAEALDSGEHLTDVSSLAVNQAALPNLLNTLAGEGVTTEFFQPLERLIDRAVEEGYGADGLSRLPDLLTPRR
>NZ_CP042266.1|WP_146481692.1|4555173_4555812_-|hypothetical-protein
MRQRQRRTGGRSSAFVPRQISVKLAIPLVGEISGVWEPDEAERDAAWELYVELATRISVVELNEDEGLLREALSSLYTVFGTTRDILRRYGPAVAPRVPAGQVTFGALAVTVLNLCVRPLLSKWHPLLTAHESLRSEHVDPVSHERRWARTPELRKEIEGVRRVMLALADALNEVAGVGDLIAVRLPVQPSDSDGSTETPDRSRDQREEAQD
>NZ_CP042266.1|WP_146481693.1|4555900_4558753_+|TIR-domain-containing-protein
MKRDGFISYSHKRDIELAQALQRGLHQLARPWTRRPVLSVFRDTTSLSANHDLWSSILNELEQTRYFIYLASPEAAESRWVRKEIQFWLDNRPLDRFLIAVSSGQVAWDQEAGDFDWERTDALPDLLRGRFTTEPLWVDLTRIREGSKYSLRQAEFRDAVGTLAAPLHGVGKDALDSEDIRQHRLSARLRRGAVSGLVVLLVTAVIASVLAWQQRNEALDRARTSASQALAARALETLDADPRKAAQFALYAEKVKPTADSAQALAATVAANGHVVRHLKPGSDEVSAYIGSRSSPPARVAISRDGGVLAYYAAFGSRKVHIYDIRTGQSRNPLPAQTQESVGGEFELSADGGILAVESGVNHVQLWDVRKARQLWAGSLGNNPKELSNAHKGFRSMALSPDGRWLAAAHATIGADSLQISIWSRAAGRVVHEELSGSQNVTLGFEETGRQLLALDEDAGSLRRYDTLRGTWGAARKLDGFQAKSDDVILAPGAGQAAVRSRDGEVQIWDLVTGKPIAGSGTGALDEIALPGAGVRFVAGARDGTVALYDRDLSRDRVLGAFSFPVQDLAVSGDGRWVAAGSDDGAISLFSADPLRAGAVLPNADGLKAKSLSTDGRVALRAVPDERVDVWTVGKGDAGLRRLMGIPKAVNFEESAVSVTADGSRAALLWEGELSLWDTRTGGQIGEPVFYGSSKSGFSGELFFLADDVHLVGIWEKGVLIIDSRTGRIRQTLSDESHYTLLVVSGDRRSVALLDRTAVEVNVWRLSEGGRMKRVRTAQLGVGSASNVSVSHGGDMVAVTQGDGRISFIDVESGRITNGAVLSQSGYGLLVFSRDTRLAAQAFSNRDGVGVRFWDTRSGDVLGTWPLKLRAPGTGVGPRAKWTYAEIDMQLAPAPEGGFLALGIDGSLVRRSLDPDVWRRDLCALAPEPLPKAEYERYLGDLAVDRPCPA
>NZ_CP042266.1|WP_146481694.1|4558831_4559107_+|DUF1876-domain-containing-protein
MHAQTLVGWHVEMEFREDGDRTRAAAMVRLSDGTEIRGHGNAQRHPSDAEQLRVGEEIAGARALMEIASQLLQKAHHEIDEASGRSSHPLN
>NZ_CP042266.1|WP_146484466.1|4559278_4563325_+|chitinase
MRAAAVPVGQAVHLQNIKNGAQLGITATGGGNIAEARAPQGDNYNQAWALERTPGGTYLLRNSELRNFCLVRDPEPLAGLCNESGAEWDVQQIGDGEYWIKVPGADRYLSSSTEISKSNKVADLKIGTDGDDRGTWFMTPVNWPKQAMPPQDRRTLEHMTYLTAHNAMINSEDGYDTLAPNQPHSMARQLADGVRALMPDVNAKVVGGSIPLCHGGSCGGQVQPGNNLEGMLRTLKTFLDANPSEVVSVFIEDQGSLENADYEQYGLNLVPGVKDLLFVPDDAKVPDALKQGWDVHRNGWPLLKDMIAKNKRLLIFSGETKRESIGFMADQRWRVENHWSMGLGLGNSDWACFSRWGSKPLGARPSGKFRPLFFMNHFRDVPMAPTYTTDNQKMRQRAENVCTTAARRKPNFVAVDQYKDGDLFPQIAQMNTYWYQAQPAPDSGGGQQPDPGTPAGDPFDNGVDRRGPKPAAGVPHSSCRPEGMVPTAGASARYCDVYDKDGREWLGGAGHDRRVVGYFNATRNGTDGRPRYLVKNIPWSRVTHINYAFARIEGNRISVGDEGAASNPATRMTWPGVTGAEMDPGLPYQGHFNQLAKYKKRHPQVKALIAVGGWADTKGFYAMATNADGTVNQAGINTFADSVVDFLGRYGAAFDGVDIDYEYPTAMPDSGNPEDWGVANPRRKGLQAGYNALMKTLREKLDGAGRYYLLTSAASASGHLVRGYDAGQALAYQDYVNVMTYDLHGSWNQYVGPQAPLYDDGRDGELAAAGVYDSVGKPEYGKTGYFNVDWAYHYYRGALQPGRINLGIPYYTRGWRDVQGGTDGLWGTAPLPDQSACQPGTGTRGFCGNGAIGIDNLWHDTSRGREVAAGSNPLWHVRNLQNGRAGDYLRAYGLDPDAPPNRLTGTYQRKYSNALESMWLWNAEKKVFLTAEDEQSIDAKIRYVKDKGIGGVMMWELAGDLGRGPDGSYGMGHELTNRIDDSLRGSGGYITERTDGTVPPDQVVDVGVEFADFPTAEADLWPQQPKLRITNRSTKPLPSGTEIAFDLPTSAPALLKDDNWQELKDTLRPGHTGPNAGGLKGTFHRVTLKLGYCEGIAAGATRDIGLKYFLPVTGPANITLKFGDAVYGSTQDRRRGATTTEPPAGNTGTACQAEAWNAARTYNPAWAPFQLWRTGDGYKIQDVNSSLVLDHPGSWATTHLIESQDGNRNQIWKIAPDGSTGRFRITSDSGGRDQCLGAESRLGELSVKNCDGGAAQSWRFTDDKGAPVAGIPADGKAHGLLAASGQVAEPRNSGNTARTKVVAGDPTGVTRTVVSYGGHWWKAKFWTKGNTPNAADARNPWTRLGPVG
>NZ_CP042266.1|WP_146481695.1|4563389_4565165_-|arginine--tRNA-ligase
MASVPSLASNVQQRLANALSAALPEAGSADPLLRRSDRADFQANGILALAKRLKGNPRELATKVVDALGTESDEVLREVEVSGPGFLNITLTDAAIIETLAARAADDRLGVALKADPGTTVVDWAQPNVAKEMHVGHLRSAVIGAAMVKILEFTGEKVISRHHIGDWGTQFGMLIQYLEEHPHELDHRQGGEVSGEEAMSSLDRLYKAARAHFDSDEEFKARSRDRVVALQSGDPETLALWQRFVDESKIYFHSVFDKLDMEIADADIVGESGYNDMLAETCRILEESGVAVRSDGALCVFFDDFKGPDGEPTPLIVQKSNGGFGYAATDLSAIRNRVGELKADSLVYVVDVRQSMHFKMVFETARRAGWLTDDVHAFQLAFGTVLGADGKPFKTREGKTVKLEELLDEAVDRATAVVREKAEKVGLGEDEIIENGRYVGIGAIKYADLSTSAVRDYKFDLDQMVSLNGDTSVYLQYAYARIRSILRKAGDARPAAHPELELHPAERALALHVDQFGEVLAEVAGSYEPHKLAAYLYQLASHLTTFYDKCQVLSSENAPELVENRLFLVDLTGRTLRQGMALLGIRTPERL
>NZ_CP042266.1|WP_146481696.1|4565439_4567170_+|lysine--tRNA-ligase
MPTVAQSTTETDWVSRFADEVIAESERRAPGKRIVVASGISPSGPIHLGNLREVMTPHLVADEIRRRGHEVRHLISWDDYDRFRKVPLGIEGVDESWGEHIGRPLTSVPAPKGSPYPNWAEHFKAALITSLDELGVVYEGISQTEMYTSGAYREQVLLAMRHRADIDEILGRYRTKKTAGGKKSQKPVDEAELEAAEGSGAAGEDDGTGSTGYFPYKPYCGNCDRDLTVVSAYDDSTTELTYNCTACGFTETVRLNEFDRGKLVWKVDWPMRWAYEGVVFEPSGVDHSSPGSSFQVGEFICPLFGWERPIGPMYAFVGISGMAKMSSSKGGVPTPADALKIMEAPLLRWLYARRRPNQSFKIAFDQEIQRLYDEWDKLAAKVADGSVLPADAAAHSRAVRTAEGELPTTPRPMPYRTLASVVDITGGHDEQTIRILSELDPANPVGSLDEVRPRLDRAENWITTQVPADARTVVRSTPDAELLSSLDDGARRSLELLVDGLDSHWSLEGLTTLVYGVPKVMAGLAPDAKPTPELKVAQREFFALLYRLLVTRETGPRLPTLLLAVGAERVRKLVTG
>NZ_CP042266.1|WP_146481697.1|4567560_4568586_-|phosphotriesterase
MPATLRTVTGPLAVTAVTGPVLPHEHLVLDLDRTGEGAAVLDAERHAPAVVMELSHLREVYGLSLVADLTCRGMGRDTAALARISRASGVPVIAGTGWYYEPYHPPEIAASDVEHLTETLIAEITHGIPDASGPPPRPDIPDIPDASGVSPRPGTTGTSAPVRPGVIGEIGTGGERPTEPETRVLRAAARAALATGLSVATHARLGRGGLAQLDVLTGEGLPPDRISIGHQDLLDDPATHRILAASGAYVAFDTIGKETYHPDTTRLRLLLALLNAGHANRALLSCDISRHAYLRAAGGRGYGHLFTGFLPALRAAGADEDLIALLTRRNALRFLTAGATT

Crispr_ID: NZ_CP042266_13

• CRISPR_ID: NZ_CP042266_13
• CRISPR_location: 4978798-4978945
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP042266_13

Consensus_repeat	Method
GCCTCGACCCCGCGCCCGCGGGGATG	CRISPRCasFinder

spacers of NZ_CP042266_13

>13.1|4978824|35|NZ_CP042266|CRISPRCasFinder
GTCCGGGGCGGGAGGTCAAGGGCGCATTCCTGGAG
>13.2|4978885|35|NZ_CP042266|CRISPRCasFinder
GTCCTATCGGCCAGGCCTTGACGAACCTGCTCATC

CRISPR arrays and Neighbor proteins around NZ_CP042266_13

CRISPR arrays

The CRISPR arrays of NZ_CP042266_13

>merge|NZ_CP042266|13|4978798-4978945|CRISPRCasFinder
GCCTCGACCCCGCGCCCGCGGGGATGGTCCGGGGCGGGAGGTCAAGGGCGCATTCCTGGAGGCCTCGACCCCGCGCCCGCGGGGATGGTCCTATCGGCCAGGCCTTGACGAACCTGCTCATCGCCTCGGCCCCGCGCCCGCGGGGATG

>NZ_CP042266|13|11|4978798-4978945|CRISPRCasFinder
GCCTCGACCCCGCGCCCGCGGGGATG	GTCCGGGGCGGGAGGTCAAGGGCGCATTCCTGGAG
GCCTCGACCCCGCGCCCGCGGGGATG	GTCCTATCGGCCAGGCCTTGACGAACCTGCTCATC
GCCTCGGCCCCGCGCCCGCGGGGATG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146482028.1|4980830_4981301_+|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|240032
NZ_CP042266.1|WP_146482023.1|4971670_4973419_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|223562
NZ_CP042266.1|WP_146482021.1|4968559_4969828_+|L,D-transpeptidase-family-protein	unknown	unknown	gnl|CDD|380079
NZ_CP042266.1|WP_146482019.1|4963976_4965362_+|diguanylate-cyclase	unknown	unknown	gnl|CDD|128563
NZ_CP042266.1|WP_146484504.1|4985326_4985749_-|RNA-polymerase	unknown	unknown	gnl|CDD|132028
NZ_CP042266.1|WP_146482018.1|4963096_4963906_+|enoyl-CoA-hydratase	unknown	unknown	gnl|CDD|181069
NZ_CP042266.1|WP_146482025.1|4978258_4978453_+|hypothetical-protein	unknown	unknown	gnl|CDD|374726
NZ_CP042266.1|WP_146484502.1|4977310_4977796_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146482026.1|4979534_4979966_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146484501.1|4966194_4967739_+|histidine-ammonia-lyase	unknown	unknown	gnl|CDD|236484
NZ_CP042266.1|WP_146482032.1|4984783_4984975_-|DUF1059-domain-containing-protein	unknown	unknown	gnl|CDD|368852
NZ_CP042266.1|WP_146482024.1|4973732_4977077_-|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173812
NZ_CP042266.1|WP_146482022.1|4969921_4971643_-|hypothetical-protein	unknown	unknown	gnl|CDD|378217
NZ_CP042266.1|WP_146482020.1|4967804_4968113_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146482027.1|4980084_4980828_+|XRE-family-transcriptional-regulator	unknown	unknown	gnl|CDD|238045
NZ_CP042266.1|WP_146484503.1|4985078_4985291_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146482030.1|4982233_4983346_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146482029.1|4981315_4981993_-|peptide-methionine-(S)-S-oxide-reductase-MsrA	unknown	unknown	gnl|CDD|234604
NZ_CP042266.1|WP_146482033.1|4986202_4986706_-|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP042266.1|WP_146482031.1|4983487_4984645_+|cystathionine-gamma-synthase	unknown	unknown	gnl|CDD|236104

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146482023.1|4971670_4973419_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	6.52659e-138
NZ_CP042266.1|WP_146482021.1|4968559_4969828_+|L,D-transpeptidase-family-protein	gnl|CDD|380079	pfam17964, Big_10, Bacterial Ig domain. This entry represents a bacterial Ig-like domain found associated with transpeptidase domains.	2.07593e-72
NZ_CP042266.1|WP_146482019.1|4963976_4965362_+|diguanylate-cyclase	gnl|CDD|128563	smart00267, GGDEF, diguanylate cyclase. Diguanylate cyclase, present in a variety of bacteria.	5.89956e-45
NZ_CP042266.1|WP_146484504.1|4985326_4985749_-|RNA-polymerase	gnl|CDD|132028	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family. This group of similar sigma-70 factors includes the sigE factor from Streptomyces coelicolor. The family appears to include a paralagous expansion in the Streptomycetes lineage, while related Actinomycetales have at most two representatives.	2.22903e-11
NZ_CP042266.1|WP_146482018.1|4963096_4963906_+|enoyl-CoA-hydratase	gnl|CDD|181069	PRK07657, PRK07657, enoyl-CoA hydratase; Provisional.	1.02083e-69
NZ_CP042266.1|WP_146482028.1|4980830_4981301_+|NUDIX-domain-containing-protein	gnl|CDD|240032	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	5.12729e-48
NZ_CP042266.1|WP_146484501.1|4966194_4967739_+|histidine-ammonia-lyase	gnl|CDD|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP042266.1|WP_146482032.1|4984783_4984975_-|DUF1059-domain-containing-protein	gnl|CDD|368852	pfam06348, DUF1059, Protein of unknown function (DUF1059). This family consists of several short hypothetical archaeal proteins of unknown function.	4.31342e-07
NZ_CP042266.1|WP_146482024.1|4973732_4977077_-|S8-family-serine-peptidase	gnl|CDD|173812	cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	3.79982e-77
NZ_CP042266.1|WP_146482022.1|4969921_4971643_-|hypothetical-protein	gnl|CDD|378217	pfam09594, GT87, Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.	0.00180475
NZ_CP042266.1|WP_146482027.1|4980084_4980828_+|XRE-family-transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	0.00146491
NZ_CP042266.1|WP_146482025.1|4978258_4978453_+|hypothetical-protein	gnl|CDD|374726	pfam16686, POT1PC, ssDNA-binding domain of telomere protection protein. POT1PC is the ssDNA-binding domain on a family of fungal telomere protection protein 1 proteins. POT1PC is able to accommodate heterogeneous ssDNA ligands. Pot1 proteins are the proteins responsible for binding to and protecting the 3' single-stranded DNA (ssDNA) overhang at most eukaryotic telomeres.	0.00996132
NZ_CP042266.1|WP_146482029.1|4981315_4981993_-|peptide-methionine-(S)-S-oxide-reductase-MsrA	gnl|CDD|234604	PRK00058, PRK00058, peptide-methionine (S)-S-oxide reductase MsrA.	2.03499e-138
NZ_CP042266.1|WP_146482033.1|4986202_4986706_-|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.76644e-19
NZ_CP042266.1|WP_146482031.1|4983487_4984645_+|cystathionine-gamma-synthase	gnl|CDD|236104	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional.	0

Protein sequences

>NZ_CP042266.1|WP_146482025.1|4978258_4978453_+|hypothetical-protein
MPQSDGRSALELPDATPVLHTLRVTRGTKNTPFFLEHLRTSGSQAQLAYRITADTARPLQPVRN
>NZ_CP042266.1|WP_146484502.1|4977310_4977796_-|hypothetical-protein
MRFHSLPESKRYPEDEAEYAVLLDRYNTVLDELFAGGDVYVVTTDWAPLSELVEWSDERADLHPEGTLWTTLDKTADPDPDFHTRWYFYADRRPWRRGCLDPLLRAAADDALPGIFVTDPGLTRIHHPYDGGADVVLPTPGERDRLRDRHSAWLSGHPSGY
>NZ_CP042266.1|WP_146482024.1|4973732_4977077_-|S8-family-serine-peptidase
MRSHVRRSLSIAVAVTAGMALTVGAGAVPGGGETGGKGTGKGQSRGGVSHSVVLVTGDRVLVGPGGQVVGVQRAEGREGMTFRTRRDGRSVYVVPHDAERLIAAGKVDRKLFDITTLSTPESRRAYRDGVKVIVAYGGSAAAAAKAEVRTSGGAKARKALPAAGAEALTAAPGRATALWKALTDTAADGRVTATAGVRKIWLDGVVKASLDRTTKQIGAPAAWDRRYDGTGVRIAVLDTGIDGSHPDLAGKVVAERNFSSAADAGDRNGHGTHVASTAAGTGAKSGGTHKGVAPGAQLINGKVLDDFGSGTWSEIMAGIDWAVAQGADVVNMSLGGSDSPGVDPVEALVDKYTVEKGVLFAIAAGNAGSGAYTVGTPGTATGALTVGAVDDNDEIAFFSSRGPRFGDGGIKPDVTAPGVAVTAAAATGTVPGSPPGYTNMDGTSMAAPHAAGAAALLKQRHPDWAGARIKAALTSSAKPGPYDVFTQGSGRIAVDRAVTQPVVAEPASVSLGTHQWPHDDAAPATERLTYRNSGTADITFDIALAGAKGPGAAPVPAGLFSLGAQRITVPAGGTATLDVTADIRVPGTTDGIYQATVVATGDDGRTVVRTATAVNREPESYNVTVRALGRDGAPDPNAAVGLQGIDGEAGGAYIPVDLSAGERTVRLPKGRYTLSGTSFTANASDGVDLMVQPLLELTGNTTAVLDARTTKPINVTVPDSRAQQGAGAVQYLLTKGSSRVLGLTMVPDLKTLRTAHVGPAVTGGSLAYSVHSTWKRTGTDYNTVLYSKGVRFPTGATKHYRKADFARIDAGFGASVPGKSGIFFSFGRPADPIFWGFAADSVQPAQTRRNSFVSTTQGSRWEMEYQQSSNPDDWESMESAHASAASSSFKAGKTYRIDFNTAAHGPSVGEYWGVFRENDTLWSHLPLFSDGHGNHAVEAAYASARTTLHRGSTLIGRFDQLPNGLELATVPGKSTEYTLRATATRAPGVTRVGTRVDGSWTFRSARPAADVFQQLPLSTVRFTPAVALDSTAPAGRTQSFPVTVQGPAAGKNLKTLTVQISYDSGKKWRKVTVKNGKITVKNPAKGKGISIQAFLADKKGNKASVRILNAYLGK
>NZ_CP042266.1|WP_146482023.1|4971670_4973419_-|ATP-binding-cassette-domain-containing-protein
MRERASSTLPAPVSGAPGRAQLTVRDVSKAYGLRPVLDQVSFTVRPGERAAVIGENGSGKSTLLRLIAGEEAPDSGEITAVAPGGTGHLAQTLDRTFPGLGPDHTVRDTVDAALAGLRELERRLRAAEERLGADPGAAELTAYGDLLTAFEERGGYAADARVDAALHGLGVGSLGRDRTLGTLSGGERSRLALACVLAAGPELLLLDEPTNHLDRRAVEWLEDRLRAHRGTVVAVTHDRAFLEGVATTVLEVDRDTRSVRRYGDGWAGYRTAKAAARRRRQQEYEEYLDELARTEEQVAAAGHRLATTGKDPAQGFGKHRRSHEAKLSGQVRAARQRLERLRREPVQAPPEPLRFRATPTTPTTPAASAGPVPAASASADSVPAAPRGPVAELTDVVVAGRLRIAALRVESGGRLLVTGPNGAGKTTLLRVLAGELRPDGGTVHHPGRVRVGYLPQELPPTPARRPEPLLSAYAAGRPGHPDEYEDELLGLGLFRSGDLAVPVGALSIGQQRRLALARLVVRPADLLVLDEPTNHVALSLVEELEEALGRYEGAVVAVSHDRRFRGGFGGRRLELRSGCPAD
>NZ_CP042266.1|WP_146482022.1|4969921_4971643_-|hypothetical-protein
MGISEQQKAADPTTAARTEITTAADSAADTGGTAGRKRRWPVPPVPLAVTAAALPFYLLWAGWLATGGGDLAAQLAWTGFTEAHPSAAYNLSWYGGTHTANYSLLAPPLMALLGVRAVSVLAGLGATWVLALIFVRSGVRYPLWPALFGAGALWANIASGRTTFALGIAIGMVALLYVRRTWLAALTAALATAASPVAGLFLVVAGAAYLLERRWRPAAALLVPPALVVGVTAVLFPFGGEMPMQSNKLWMPLWMSAVVVLVAPRDRGWRLVRWGAGIYALGVVLTYFTPSPIGRNVERLVGLAGPPVLMAALIATVTAAGGLAALAASWRQRAPRALVPPVVLAVALALLTNWLIDKTEDDLVVSNKVPAWAKETDGVVRELERLGADRTRVEVVPARNHREATVLAPHVNMARGWNRQLDVERGRLFYDGSLNAETYRAWLDRWAVGFVVLHHGRPDGPAEEEARLVRGGPSYLERVWRDAHWSVYRVRDAVPLVSAPARVVRQDRAELVVRMPAAGSVTVKVAHSPWLRAPGACLEAAGEFTRLTVKKAGEYRIGSPYRPRLPWAGDPGC
>NZ_CP042266.1|WP_146482021.1|4968559_4969828_+|L,D-transpeptidase-family-protein
MEMRVMTDSKRRRGLMVASAVLGGVMVLSACSGDGDKNGGGGTDTGKKSQAQVDEAAAKQVSKARIAIEPKNGTANAGINNAKVTVVDGTLTEVKMVTSEGKPVEGAIAGDGKSWAPAKPLKRSTTYKITASAKDDKGLVAFENGSFTTVSPGNSFIGRFTPEDGQTVGVGMPVSINFDKPVKNRKAVQAGITVTSTGGQEIVGHWFHSQRIDFRPEQYWKEGSTVTLKLALDGVEGAPGVFGVQQKTVTFKIGRNQVSTVDASSKQMVVTRGGKTIRTIPISAGAPATPTYNGQMVISEKFKETRMNGATVGFTDSDGKGEYDIKDVPHAMRLSTSGTFIHGNYWGADSVFGGQNTSHGCVGLNDKKGANDPNQPGAWFFNSSMIGDVVIVKNSKDKTIKPDNGLNGWNMDWAAWKAGSEA
>NZ_CP042266.1|WP_146482020.1|4967804_4968113_-|hypothetical-protein
MASVSLALRPLVTAAAAGALLCALWFVPSANATTERPPADRGYSSTGSLRDTGSTAGVPLRLADTGSVDTTPYLLGGAAFLAVGISFVTYAVRRGHSAPDTI
>NZ_CP042266.1|WP_146484501.1|4966194_4967739_+|histidine-ammonia-lyase
MHTVVVGTSGTSSADVVAVARHGARVEISPEADAALAAARSVVDALAAKPEPVYGVSTGFGALATRHIGPGLRAALQRNIVRSHAAGMGPRVEREVVRALMFLRLKTLCSGHTGVRPGIARTMAAVLNAGITPVVHEYGSLGCSGDLAPLSHCALALMGEGDAEGPDGQVRPAGELLAAHGIAPVELREKEGLALLNGTDGMLGMLLLALDDLRRLYTSADITAALSLEALLGTDRVLAPELHAIRPHPGQAVAAANMAAVLKGSGLTGHYQQDDAPRVQDAYSVRCAPQVAGAGRDTVDHARLVAERELAAAVDNPVVLPAEGRVESNGNFHGAPVAYVLDFLAVAAADLGSIAERRTDRLLDKNRSHGLPPFLADDPGVDSGLMIAQYTQAALVSEMKRLAVPASVDSIPSSAMQEDHVSMGWSAARKLRTAVDALGRIIAVELYTAARAIELRDGLTPAPASAAAVAALRAAGVAGPGPDRFLAPDLAAAAEFVRDGSLIAAVEPVTGPLG
>NZ_CP042266.1|WP_146482019.1|4963976_4965362_+|diguanylate-cyclase
MMAEDQRLRAVVALAQAMAAAQTPREFWRAAALGACAALDGSFAALSVWERELGRLKVLVNAGERAPDEEEFPDAETYPVNRFPEITEFLHERWAGGGEPEAWVETAESGGVPGFAAFPVPGAGGPAGGPAALAGTEPGAVRPEPGRDPVVPEPGRDSVVPEYGPDRPSGYGPEYVTATATAAVRGYRHPSFPVGSGGARGRAAALRRRRRGCCVVAPIVLHGRAWGELYVARPIGAPVFGRDEAHFATVLAAVVAAGIAQTERLEEVRRLAFTDPLTGLANRRAVDTRLDEALERHRADGTVVSLVVCDLNGLKRVNDTLGHAVGDRLLERFGSLLSLCGAMLPDALAARLGGDEFCLVCVGPEADEVVRVAGELCVRAAELAPGEGVACGVASTGDPIGQIPTARRLFRLADAAQYRAKAARSAKPVVAGRDGTVLRLADTPPVQQPQERRAFRGDAPR
>NZ_CP042266.1|WP_146482018.1|4963096_4963906_+|enoyl-CoA-hydratase
MAEGPFEQRFGEFVVVRTHGHVAELVLDRPASMNAVSAAMARSLVAACAALAEDRDVRVAVLTSSHDRAFCVGADLKERNGLSDADLMRQRPLARAAYTGVLELPMPAVAAVRGYALGGGYELALACDVIVADATTVVALPEVSVGVVPGGGGTQLLPRRVGAARAAELVFTARRVAAEEAFALGLVDRLAEGDGDARSEALALADLIAGNSPVGLRAAKRALRLGQGLDLRAGLEVEDAAWRTVAFSGDRAEGVAAFNEKRKPEWPGE
>NZ_CP042266.1|WP_146482026.1|4979534_4979966_-|hypothetical-protein
MSDETVAVAEKLKIPPRKGFWAECMVQHPGEAALLVASYDALSPGEAVAWVKSLFQLASEALVPGPVDAFGPDGDYWGWTARRLSRGEPCLVSVRNPDVAAQWIVTPVIFLPMAGRDDRLLPPCSGAFACPAGWPGHSGCADG
>NZ_CP042266.1|WP_146482027.1|4980084_4980828_+|XRE-family-transcriptional-regulator
MSNERLRASMAAGGWTCAALGKRAGVDPKSVERWLNLGRTPRRATATLAAEALGEDMFTLWPALRPERTARVVSPELVAFYDQRADVPVSTFTDLFAQAGKQIDILVYAAVFLHEAYPRLNELLRERAADGCTVRIAIGDPESENVQQRGREEQFGHGIETRCSLALMHYRPLRQVPGIEIRTHGTTLYNSLYRADDQLLVNAHVWGVNAYAAPIWHLRRSGAGGTFHTYAQSFDAVWSTATPVPEE
>NZ_CP042266.1|WP_146482028.1|4980830_4981301_+|NUDIX-domain-containing-protein
MSRTEYYDDPDAPEPNSLVVAASAVVTDDDGRILLQRRRDSGLWALPGGGMEMTDSLPGTAVREVAEETGLEVEITGLVGTYTDPRHVIVYSDGEVRRQFNICFTARVTGGELAISDESTELRFIAPEDLEDLPMHHTQQLRVQHFLEHRERPYLG
>NZ_CP042266.1|WP_146482029.1|4981315_4981993_-|peptide-methionine-(S)-S-oxide-reductase-MsrA
MFLSRRAPVLPTPEEALPGRPSPAFSVPDRHTVLGNALLGPYPEGLEVADFALGCFWGAERKFWQTPGVWTTLVGYQGGHTPNPSYEEACSGHTGHTEAVRVVFDPSVVSYEQLLKLFWESHDPTQGFRQGNDVGTQYRSAVYTHSPAQAATAAASREAYQKVLTGSGYGTITTEILPAEGRPFYPAEAYHQQYLDKNPAGYCGIGGTGVSCPVGVTPAPETEEK
>NZ_CP042266.1|WP_146482030.1|4982233_4983346_-|hypothetical-protein
MEILWFLIAMGLLFCVVAPFVRRRRGGGGLQVVDPRSPDAADPEAYGFLRQEQQDIRLPGPDQDLLDVLDVVQQTQSWKPAAQLLAGTPAAGEVRWQRVQAFAGAAALELQQRPGVGGSWLRAWRSEAPQDPGAAQVHAQFLVQQAWRSSAVGQDDFRMILEEARTVCEEAARLSPDDPVPYITELAVARGLGYRHEQFDQLWAKVIDRAPAHMGGHLAALPYLGEKWHGSREEADHFATTAAARAPKGSLLAALPLFAVYEHIPDLVIMQNFHRSAVVSKAVDGALYAVHSARPDDPMLAHVRHLLALFLIRSERWAEAMTQLVRVDGHVGALPWTLSEDPAAEYTLYRNLAVAGFEANGGSPAMLGGV
>NZ_CP042266.1|WP_146482031.1|4983487_4984645_+|cystathionine-gamma-synthase
MSDDQHSHHHLETLAIHAGNTADPLTGAVVPPIYQVSTYKQDGVGGLRGGYEYSRSANPTRTALETNLAALEGGRRGLAFASGLAAEDCLLRTLLSPGDHVVIPNDAYGGTFRLFAKVVARWGVEWSVADTSDPASVRAAITPKTKVVWVETPSNPLLGITDIAAVAGIAHQAGARLVVDNTFASPYLQQPLALGADVVVHSLTKYMGGHSDVVGGALVAADEALGEELAFHQNAMGAVAGPFDSWLVLRGIKTLPVRMDRHSENAGRIADMLTRHPKVTAVLYPGLPDHPGHETAAKQMKAFGGMISFRVAGGERAAVEVCDRARLFTLGESLGGVESLIEHPGLMTHASVAGSALEVPADLVRLSVGIEAVDDLLADLQQALG
>NZ_CP042266.1|WP_146482032.1|4984783_4984975_-|DUF1059-domain-containing-protein
MTRKVADCRKYPSESGCTLSIAGEEDEVVRAATEHAVSVHGHDDSPELRQQIRGLLEDERVPA
>NZ_CP042266.1|WP_146484503.1|4985078_4985291_-|hypothetical-protein
MLSAGAAALPPDLPRRAMDLGERIARRRRAARGAVWLLLFALITGLLLWAAVAEPWSRPPRETTPPVEGL
>NZ_CP042266.1|WP_146484504.1|4985326_4985749_-|RNA-polymerase
MSGNRARGFGSFVAGAGGRLLHAATLLTAETPDGNPRARRLLVSALARTYAGWDQLRDEDPYDHARRELAARFALGSWRFHRSRGGLLGALHPRERLVLVLRLYEGLPEEQTAALLGLSAERIRTICHRAVATVHTPGAG
>NZ_CP042266.1|WP_146482033.1|4986202_4986706_-|MarR-family-transcriptional-regulator
MPTSQDMTTRLDPGLLDALQHQVALFARRAEQTRLGGVGQVRNSMDRAAYLLLNRLDREGPMGVKALAAGMGIDSSTVTRQVAPLVDTGLVKRTSHPEDGRAVVLQLSPRGQARLEEVRSSRRALMAQVTDGWSDSERESFTSLLTRFNRALSARQTGTEVPPPATG

Crispr_ID: NZ_CP042266_14

• CRISPR_ID: NZ_CP042266_14
• CRISPR_location: 5362847-5363008
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP042266_14

Consensus_repeat	Method
CGCCGATCTCTCCGGCGCCGATCTGCG	CRISPRCasFinder

spacers of NZ_CP042266_14

>14.1|5362874|48|NZ_CP042266|CRISPRCasFinder
CGGCGCGGACCTGCGCGGGGTGAGCCTGCGGGGCGCGTATCTGATCGC
>14.2|5362949|33|NZ_CP042266|CRISPRCasFinder
GCAGGCCGATCTCATCGGCGCGGACCTGCGGGA

CRISPR arrays and Neighbor proteins around NZ_CP042266_14

CRISPR arrays

The CRISPR arrays of NZ_CP042266_14

>merge|NZ_CP042266|14|5362847-5363008|CRISPRCasFinder
CGCCGATCTGATGGGCGCCCGGCTGCGCGGCGCGGACCTGCGCGGGGTGAGCCTGCGGGGCGCGTATCTGATCGCCGCCGATCTCTCCGGCGCCGATCTGCGGCAGGCCGATCTCATCGGCGCGGACCTGCGGGACGCCGATCTGTCCGGCGCCGATCTGCG

>NZ_CP042266|14|12|5362847-5363008|CRISPRCasFinder
CGCCGATCTGATGGGCGCCCGGCTGCG	CGGCGCGGACCTGCGCGGGGTGAGCCTGCGGGGCGCGTATCTGATCGC
CGCCGATCTCTCCGGCGCCGATCTGCG	GCAGGCCGATCTCATCGGCGCGGACCTGCGGGA
CGCCGATCTGTCCGGCGCCGATCTGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146482307.1|5371005_5372262_+|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|380046
NZ_CP042266.1|WP_146482308.1|5374059_5374344_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146482296.1|5354396_5355737_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146484547.1|5370270_5370879_+|ATP/GTP-binding-protein	unknown	unknown	gnl|CDD|225138
NZ_CP042266.1|WP_146484543.1|5350786_5351833_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|223715
NZ_CP042266.1|WP_146482303.1|5364856_5365648_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146482294.1|5352027_5352768_-|response-regulator	unknown	unknown	gnl|CDD|223816
NZ_CP042266.1|WP_146484548.1|5372423_5373593_-|hypothetical-protein	unknown	unknown	gnl|CDD|366353
NZ_CP042266.1|WP_146484544.1|5352859_5353564_-|spermidine-synthase	unknown	unknown	gnl|CDD|223498
NZ_CP042266.1|WP_146484545.1|5355828_5356608_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213231
NZ_CP042266.1|WP_146482295.1|5353750_5354344_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146482306.1|5369747_5370176_+|DUF742-domain-containing-protein	unknown	unknown	gnl|CDD|283084
NZ_CP042266.1|WP_146482298.1|5358383_5358887_-|DUF1877-family-protein	unknown	unknown	gnl|CDD|378105
NZ_CP042266.1|WP_146482302.1|5364315_5364798_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP042266.1|WP_146482304.1|5366140_5369272_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|377989
NZ_CP042266.1|WP_146482297.1|5357704_5358316_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|224511
NZ_CP042266.1|WP_146482301.1|5363213_5364080_-|lysozyme	unknown	unknown	gnl|CDD|119374
NZ_CP042266.1|WP_146482299.1|5359075_5361490_+|endopeptidase-La	unknown	unknown	gnl|CDD|223542
NZ_CP042266.1|WP_146484546.1|5356643_5357558_-|zf-HC2-domain-containing-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146482305.1|5369268_5369751_+|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl|CDD|214939

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146482307.1|5371005_5372262_+|FAD-dependent-oxidoreductase	gnl|CDD|380046	pfam17885, Smoa_sbd, Styrene monooxygenase A putative substrate binding domain. This domain is found in the 46 kDa FAD-specific styrene epoxidase (SMOA) protein, comprises a part of the styrene monooxygenase (SMO) two-component flavoprotein monooxygenase enzyme. Structural analysis indicates that SMOA monomer comprises two globular domains spanned by a long alpha-helix. This domain contains a putative substrate binding site.	1.06987e-57
NZ_CP042266.1|WP_146482301.1|5363213_5364080_-|lysozyme	gnl|CDD|119374	cd06412, GH25_CH-type, CH-type (Chalaropsis-type) lysozymes represent one of four functionally-defined classes of peptidoglycan hydrolases (also referred to as endo-N-acetylmuramidases) that cleave bacterial cell wall peptidoglycans. CH-type lysozymes exhibit both lysozyme (acetylmuramidase) and diacetylmuramidase activity. The first member of this family to be described was a muramidase from the fungus Chalaropsis. However, a majority of the CH-type lysozymes are found in bacteriophages and Gram-positive bacteria such as Streptomyces and Clostridium. CH-type lysozymes have a single glycosyl hydrolase family 25 (GH25) domain with an unusual beta/alpha-barrel fold in which the last strand of the barrel is antiparallel to strands beta7 and beta1. Most CH-type lysozymes appear to lack the cell wall-binding domain found in other GH25 muramidases.	5.53025e-114
NZ_CP042266.1|WP_146484543.1|5350786_5351833_-|HAMP-domain-containing-protein	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.30174e-46
NZ_CP042266.1|WP_146482306.1|5369747_5370176_+|DUF742-domain-containing-protein	gnl|CDD|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	3.46801e-31
NZ_CP042266.1|WP_146482294.1|5352027_5352768_-|response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.89209e-82
NZ_CP042266.1|WP_146482302.1|5364315_5364798_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	8.27296e-16
NZ_CP042266.1|WP_146484545.1|5355828_5356608_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	5.58716e-105
NZ_CP042266.1|WP_146484548.1|5372423_5373593_-|hypothetical-protein	gnl|CDD|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.58788e-23
NZ_CP042266.1|WP_146482298.1|5358383_5358887_-|DUF1877-family-protein	gnl|CDD|378105	pfam08974, DUF1877, Domain of unknown function (DUF1877). This domain is found in a set of hypothetical bacterial proteins.	1.04839e-29
NZ_CP042266.1|WP_146484544.1|5352859_5353564_-|spermidine-synthase	gnl|CDD|223498	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism].	9.30532e-08
NZ_CP042266.1|WP_146484547.1|5370270_5370879_+|ATP/GTP-binding-protein	gnl|CDD|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	2.36005e-43
NZ_CP042266.1|WP_146482297.1|5357704_5358316_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	7.026e-30
NZ_CP042266.1|WP_146482304.1|5366140_5369272_+|HAMP-domain-containing-protein	gnl|CDD|377989	pfam08376, NIT, Nitrate and nitrite sensing. The nitrate- and nitrite sensing domain (NIT) is found in receptor components of signal transducing pathways in bacteria which control gene expression, cellular motility and enzyme activity in response to nitrate and nitrite concentrations. The NIT domain is predicted to be all alpha-helical in structure.	5.42046e-21
NZ_CP042266.1|WP_146482299.1|5359075_5361490_+|endopeptidase-La	gnl|CDD|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP042266.1|WP_146482305.1|5369268_5369751_+|roadblock/LC7-domain-containing-protein	gnl|CDD|214939	smart00960, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	2.24432e-12

Protein sequences

>NZ_CP042266.1|WP_146482299.1|5359075_5361490_+|endopeptidase-La
MAAESGTFTPFTLPVLPLDDEVVLPGMVVPLDLTDTEVRAAVEAAQAAARSSGGSKPEVLLVPRVDGHYAATGVLGTVEQVGRLSDGDPGALIKGQHRVRIGAGTTGPGAALWVEGTSVDESLPDPLPGQVLELAKEYKALVTDWLKKRGAWQVVDRVQQIDDIAQLADNAGYSPFLSVAQKIELLDTADPVARLRLATEQVRDHLAEQDVAESIAKDVQEGVDKQQREFLLRRQLDAVRKELRELNDEKEGEESDDYRARVEAAELPEKVREAALKEVDKLERASDQSPEGSWIRTWLDTVLELPWNERTEDAYDIQGARSVLDAEHSGLADVKERITEYLAVRKRRADRGLGVVGGRRGGAVLALVGPPGVGKTSIAESVAHAMGRKFVRVALGGVRDEAEIRGHRRTYVGALPGRIVRAVKEAGSMNPVVLLDEIDKVGSDFRGDPAAALLEVLDPAQNHTFRDHYLEVELDLSDVVFLATANVLEAIPEALLDRMELVRLDGYTEDEKIVIARDHLLPRQLERAGLEPDEVVVDEAALRKLAGEYTREAGVRNLERSVARLLRKVAAQHELGERELPYTVGPDELRGLLGRPHHVPESAQDPAERRTAVPGVATGLAVTGAGGDVLYVEASLADPETGAAGLTLTGQLGDVMKESAQIALSYLRSHGAETELPVADLKERGIHIHFPAGAVPKDGPSAGITMTTALASLLSGRLVRTDVAMTGEVSLTGRVLPIGGVKQKLLAAHRAGVTTVIIPKRNEPDLDDVPAEILDTLDVHAVTDVRQVLALALAPASVPIPAAA
>NZ_CP042266.1|WP_146482298.1|5358383_5358887_-|DUF1877-family-protein
MSMSGVHLRFTPAELTRALREPDWAEEYAEELLAAESDSEHLPSTARSHHTYTAWHGLDFLLRRHGFPVDVVHGEEEIPGTAEWGYGPPRFLPPERVRAAADAFAGLSPGALVAGVTAADLVAAEVYPVSQWTDEYSLGLVTACVRPLAAYVRNTALRGHALLMWIA
>NZ_CP042266.1|WP_146482297.1|5357704_5358316_-|sigma-70-family-RNA-polymerase-sigma-factor
MRLIRPRGCEQEGVGPEPDDAALLRAVARGDADALAALYDRHAGWLHARLTRRCPDPETVREVLQDTFVTVWRSAASHRGGEAGGWLWVIAARRLVDAGRARARAERPAAAPVPPPPAVPSAEDRVLSGLEYGDVGAALDRISPELRAVLRATVIDGLTTREAARLLGIPEGTVKTRARRARAELRAALEHLAPDPHPLGGTA
>NZ_CP042266.1|WP_146484546.1|5356643_5357558_-|zf-HC2-domain-containing-protein
MSGTLAAAYADGTVREPDAWSLEKHLENCGPCAAVVSAAVRETAAGAVVADVRAAVLGAVPAAGGARSRPAVNLGRLSARDRPARTAHHGRAPEVIRTGPLRTGLLRAVGPALSRGWLGALAAVIGGAFALSYGIGSEAARPLLLALAPALPPAGVALSYGRHADPLHEIAAATPSGGLRLLLTRSAAVLALSLTLLTAAGALLPAGGGAPGAAAWLLPALALTAGALALGTWTGLRTAAAALTGGWLAVALFPAAVTSPVGFGALPAQLLSGATAQLGWAAAAALCTGLLVLRRTTFDRMEKA
>NZ_CP042266.1|WP_146484545.1|5355828_5356608_-|ATP-binding-cassette-domain-containing-protein
MAGLTVRHRRTVALDAVDLDFGTGVHGLLGPNGAGKTSLIRVLATVAAPTAGRLTLLGHDVSAHRGRTEVRRRLGYLPQEFGYYPGFTVREFVAYVAWLKEMPAAGVPDAVQYAVERVGLADRADAKVRTLSGGMVRRVGIAQAIVNEPELLLLDEPTAGLDPEQRVEFRALLREIGETATVIVSTHLVEDVAAACTRVTVVESGRVAWRGTTRELSALGPEAGDGDDGTGGEGSAIERGYTAALRAHRAASATAAGTR
>NZ_CP042266.1|WP_146482296.1|5354396_5355737_-|hypothetical-protein
MPTLKSPAPPGAAASPPRTPRAPRRHPLRAELLRGIGPWTGAAVALAVGLMLYEKADPDTDWQSHWSAGAELLRVGAVQFGGPIALAAGVWQGGRERRRGTLELRAGAARGTLRQTLVAVAPVVLWPVAVHLLGALVMVLAILPYASAGGPYGSVVVADSVALASCGVLGFVVGRLVAWRLAAPLLGIAAWLAMVGFQNGHGTRRKVLTLLNPADQLDLYGRVPVWWFAPASLLWTGGVAATVLLLYAARRRAFALVPLAAAVLGAATLMSTGDGLWRDSPALTRQVCTGQDPEICVTAQNRRLLPDVTAALSGVHAELRGVPGAPVRWTEAPDGVLKPGEAALSDLFGNAFRGRLGEPEAFAYGSVGALFGWCATERPGWERAIDITQAASDWLAPYTHNWYEPTPETKRHLNRLKAMTPAESRAYLTRLLASDRCENPGAVPAP
>NZ_CP042266.1|WP_146482295.1|5353750_5354344_-|hypothetical-protein
MLYGRSRGLPAALAVLVATALSTAWFAPRLLVGENGIADPANRLPLVLVAPLVAAVAIGTGLHTPSDELDRSAARAWWRPRLLQLLGLTGLAAGSFALAVTGSPELYGSPAAIRNLLGCTGIVLLTAVVAGAGAGWLPAVLYTALAYLLYQDPGSGPVGWVVRPGPGAQAWTTAVVLYVTGAAAWLWRGARRGTRPA
>NZ_CP042266.1|WP_146484544.1|5352859_5353564_-|spermidine-synthase
MSAPVTLDRREGPYGEVVLRRRGDHHEIIANGCFLMDTSDGRSERRLVDAAFETLTAATGPRSARTSEKRPIRPALLIGGLGVGFSLAHAAADSRWGAITVVEREAAIVDWHLTGPLSGISGPAVDDPRSVILRTDLLAHLRAVKHRYDALCLDIDNGPDWTVTEDNAGLYTLAGLALCRTALTSGGVLAIWSAQPSPEFEQALRNAGFSGVRTEEILVARGVPDVVHLAVSPA
>NZ_CP042266.1|WP_146482294.1|5352027_5352768_-|response-regulator
MEQTQTTTQSGVAATPGAQRRVLVVEDDSTIVDAIAARLRAEGFLVQTAGDGPAAVDAADAWQPDLMVLDVMLPGFDGLEVCRRVQAQRPVPVLMLTARDDETDMLVGLGVGADDYMTKPFSMRELAARVHVLLRRVERAALAAVTPRSGILRLGELEIDHAQRRVRVRGDDVHLTPTEFDLLVCLANTPRAVLSREQLLAEVWDWADASGTRTVDSHIKALRRKIGAERIRTVHGVGYALETPAP
>NZ_CP042266.1|WP_146484543.1|5350786_5351833_-|HAMP-domain-containing-protein
MKTKLGVLVVVSVFITTGLLLVALKTSTELRFITVFSIIATLLITQFFAHGLTAPLDEMNRVAKGISHGDYTRRVLGADRRDELGDLATTINLMADDLEAVDRHRKELVANVSHELRTPIAALRAVLENVVDGVSAADPETMRTALTQTERLGRLVETLLDLARLDNGVVPLRAHRFEVWPYLSGVLKEANLADAHRKLASGSGRHTRTDVHLHLDVSPPDLTAYADTERLHQVVANLIDNAVKHSPPHGRVTVLARRGPQPESLDLEILDEGPGIPEQERHRVFERFNRGEVAFPHGKGSDGGTGLGLAIARWAVDLHGGRIGVAESTRGCRIRVTLPGIPVRRQLT
>NZ_CP042266.1|WP_146482301.1|5363213_5364080_-|lysozyme
MSVQRSGTTVPHPEPKRYRRSRTTAAGTLLAVLLPATALPASAAPTPAGDTEPPPRGSAYLGMGVLRHDGQDGLPVPTRAAQTEGVDVSSHQGNVDWSALWSSGVRWSYVKATEGTYYKNPYFAQQYNGSYTIGMVRGAYHFATPDTTSGTAQADYFVDNGGGWSRDGKTLPGALDIEWNPYGAACYGKTTSQMVTWIRDFLARYKARTGRNAVIYTSTSWWKQCTGNYSGFGANTPLWIARYSTTPGELPAGWEFQTMWQYTSSGPIVGDHNKFNGAYDRVVALANG
>NZ_CP042266.1|WP_146482302.1|5364315_5364798_+|MarR-family-transcriptional-regulator
MHGSGTGSEAAPNGASGVDQVFLALERELAVFLRRARAQSGEMAREVHPGLESSAYGLLVRLEDAGAQRATDLAAYFGVGKATMSRQLRALEGVGVVVREPDPADGRASLVRLTEEGLERFRRVRDARRERYVRKLAGWDRGEIAELGRLLRQLNDRAAD
>NZ_CP042266.1|WP_146482303.1|5364856_5365648_-|hypothetical-protein
MRIELATSAGLPERPNEDWASVALPASGQGGSLVALDGVTPPRGDDGCVHGVPWFTARLGGALLELTTSRHDLQLTGILSTAIRRTADAHRQTCDLSHVRTPQATVVLARWGGPAGDLEYLVLSDSTLLLESPAGEVRAVLDDRLDRLPREALRTHASADVLRNAEGGFFTAAADPSVAARAVTGRVPRAGVRSLTALTDGASRWTDLFKEGDWTDCVALLRASGPQALIDRVRAVETTTREETTGPIRWKLHDDATAIFVEP
>NZ_CP042266.1|WP_146482304.1|5366140_5369272_+|HAMP-domain-containing-protein
MPLPPPEVPVARGRSKKLRSRLVIGVAVVALIVTGAGAPGLLDSSSELHDSQRLVTLAELNRQAVTLAHSLADERDGVTAYIAAGREAGRGDRQKAVAAPSARVDRQIEEIRGSIPDERAALRRDLATVPTVRRTALGGKGTALEAHNAYTTVINGLHALAGELAEKTPPRAADGARAHAELGLAVEQASATRGLLLAALAVPGGASDLSDGSGDGRTDGSGQPDGTGQSDGTGQSDGSGPSGEEESEEQKAAARARDALSALAQQARVREEAALADFDQDAAKSARDSLLATVTGAEVKAAEAYLGRLTDEPRLSGRDRETDPRKLAAALTARIEQMRGVESALAAQRITAFEQLRDDDVTELEIRIAVLGGLLLLAVAVLAALLRTITRPLSVLRRGAARLAGAPETEEPVGFTGRNDEFARTVHSLNTLHGKVRELAERARSLDSARGGLAGDRDALAAELAAVRAEAHLRTEELTADVERLRHSVEHTFVNLSLRNLGLVDRQLSVIEKLEEREQDPERLATLFKLDHMATVMRRHSENLLVLAGAEHGHSHPNAVPLVDVLRAAVSEIERYERVVIQSLPPQTQVAGFAADDLSHLVAELLENATAFSPPEARVELSGWLLENGEVMLSVQDTGIGMTAGRLAELNEKLENPASFEEPAGAAGPAADGQDGQGPGKNGKAGKSGRNGKNGKAAGRNGKNGRSAEPEGLGLRVAALLAARHGVRVQLRDQQQGGITAVVVLPMALLPQGACADRRDPLSDSGSMPAVRLPGSVAEANSNALPAGSRQAAVRTSAGTDPSPGAGTVTAGGSVPAPAAPADDAPPALPMRSPGAPAAPVPAPRPIFADPLTDPLTDPLVEAAEAAVRAAEPEAHGRTADGDPVVAGIDEPTFEMRFPDPGNNPGNNPGHDPGIDFGNDSGTVSAADPADHTAPAAPTIDETTDQTTDQSTDPTMHPAPAGPAAPAWDRVTDKGLPKRTPKVVRAATDPGERRSGGVDAAELRRRLGGFQKAAEDGRREAQAEIARTAAPEEAGDTVEEARS
>NZ_CP042266.1|WP_146482305.1|5369268_5369751_+|roadblock/LC7-domain-containing-protein
MTATGTFGLSTEARNLHWLLSNLVEEVPGLRSVAVVSSDGLLLLSSDPEQNTAATGTTSSDGPRGSSADLATIVSGIGSLTIGAARLMDGGGVKQTVVAMEDGCVFIMSISDGSLLGVHAEADCDMTVVAYHMGLFVGRAGHVLTPELRSELRQSLEGAR
>NZ_CP042266.1|WP_146482306.1|5369747_5370176_+|DUF742-domain-containing-protein
MNAAAAGPAGAGPAKLPVRGENRRPARVRPYSLTGGRTRFGHVLLVETFVAALEAPADRRELPKGDLSSRVMPELQAIVELCRRMRTVAEISAILKMPLGVVRVLLSDLADQGKIRVYGTGQGPGRPERALLERVLSGLRRL
>NZ_CP042266.1|WP_146484547.1|5370270_5370879_+|ATP/GTP-binding-protein
MPTDAEEPEEGLQSWQLDHTRAPTVAKVVVAGGFGVGKTTFVGAVSEITPLQTEALMTEASEETDDLSATPGKLTTTVAMDFGRITLYDDLVMYVFGTPGQQRFWFMWDDLVRGAVGALVLADTRRLSDCFPALDYFESSGLPYIVAVNHFEGSELFETEDVREALTIAPHVPIVIIDARKRYSVVEALSALVARALDETPE
>NZ_CP042266.1|WP_146482307.1|5371005_5372262_+|FAD-dependent-oxidoreductase
MRKILIVGAGQSGLQLALGLQDRGYEVTLMSNRTADEIRSGRVMSTQCMFHTALQHERDLDIGFWESQAPRIDGLGVSVAGPPAEDAPEGPLPRIIDWVGKLDGYAQSVDQRVKMAGWMETFAQRGGQLVIHGAAVSDLDFFARTYDLVMVSAGKGELVSMFGRDVSRSPYDAPQRALAVAYVHGLGPRPEHPDYDAIRCNLVPGVGELFVMPTLTTSGRADILFWEGIPGGPLDVFAGVKDPAEHLALTLRLMERFTPWEYARAGKVELTDGGGTLAGRYAPVVRNPVGRLPGGGAVLGVADVVVANDPITGQGSNSASKCAASYLESITDHGDRPFDETWMRNTFERYWTTAQHVTKWTNAMLAPPPEHVLNLIGAAGQIQPVADRFANGFDNPADFENFFFDPEKAGAYLSTFGG
>NZ_CP042266.1|WP_146484548.1|5372423_5373593_-|hypothetical-protein
MLRAVCTAALAAATTVAAVPVPAAFAGTFLRAGAAPALPAVPEPEAPAATVPEMLTRLGTLYHEAEAAAAAYGAAESRLTAQRAETARLGRELTAARDALTAGRDAAGRLAREQYRGHSNLSASLRLLLARDPQAALDEGHLLRRAAADRLGTLDRLAARTRQAEQLSRAARAALDAERALAAERQRARETADERLAAVEETLSTLTPEQLDGITSPESQARLAGSGALGAPADGAVAPRPTAAGVRAVRYAVEQIGKPYEWGAQGPDTYDCSGLTSEAWSSAGRTIPRTSQEQWRKLPRVPVGQLRPGDLVVYFAGATHVGLFLGEGRVVHAPRPGAAVKVSPLAANPVLGAVRPDPGGTPVAEYAPPELPESATDGSDAGYSATEAP
>NZ_CP042266.1|WP_146482308.1|5374059_5374344_-|hypothetical-protein
MRSEKTPFTGGPMDGQVLEVLVGPTGHPPKWYEVPVPQDGGGPPVVHAYRREPAGYGKRLGLPRGWMYVYAPEGRERRELKWPWSGPGRGRGPV

Crispr_ID: NZ_CP042266_15

• CRISPR_ID: NZ_CP042266_15
• CRISPR_location: 5809471-5809562
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP042266_15

Consensus_repeat	Method
GGTACGGCCGCGTTCGCGGCGGC	CRISPRCasFinder

spacers of NZ_CP042266_15

>15.1|5809494|46|NZ_CP042266|CRISPRCasFinder
CGGGGGCTGAGGCGGGAACCCGTAGCCGGGGCCGGGAGGGACGGGT

CRISPR arrays and Neighbor proteins around NZ_CP042266_15

CRISPR arrays

The CRISPR arrays of NZ_CP042266_15

>merge|NZ_CP042266|15|5809471-5809562|CRISPRCasFinder
GGTACGGCCGCGTTCGCGGCGGCCGGGGGCTGAGGCGGGAACCCGTAGCCGGGGCCGGGAGGGACGGGTGGTACGGCCGCGTTCGCGGCTGC

>NZ_CP042266|15|13|5809471-5809562|CRISPRCasFinder
GGTACGGCCGCGTTCGCGGCGGC	CGGGGGCTGAGGCGGGAACCCGTAGCCGGGGCCGGGAGGGACGGGT
GGTACGGCCGCGTTCGCGGCTGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146482605.1|5800097_5800307_+|DUF397-domain-containing-protein	unknown	unknown	gnl|CDD|377231
NZ_CP042266.1|WP_146482620.1|5820514_5820880_+|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl|CDD|274862
NZ_CP042266.1|WP_146482609.1|5801744_5802725_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|223521
NZ_CP042266.1|WP_146484582.1|5804555_5805545_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|223674
NZ_CP042266.1|WP_146482616.1|5813934_5815455_+|type-VII-secretion-protein-EccB	unknown	unknown	gnl|CDD|368288
NZ_CP042266.1|WP_146482611.1|5803671_5804559_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224094
NZ_CP042266.1|WP_146482614.1|5811119_5811353_-|DUF397-domain-containing-protein	unknown	unknown	gnl|CDD|377231
NZ_CP042266.1|WP_146482604.1|5799544_5799964_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146484583.1|5812377_5813547_-|type-VII-secretion-protein-EccE	unknown	unknown	gnl|CDD|274857
NZ_CP042266.1|WP_146482615.1|5811673_5812381_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146482617.1|5816914_5817391_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146482608.1|5801252_5801450_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146482607.1|5801058_5801256_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146482618.1|5817394_5819164_+|hypothetical-protein	unknown	unknown	gnl|CDD|223021
NZ_CP042266.1|WP_146482621.1|5820945_5821245_+|WXG100-family-type-VII-secretion-target	unknown	unknown	gnl|CDD|274862
NZ_CP042266.1|WP_146482606.1|5800491_5800755_-|GntR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|225099
NZ_CP042266.1|WP_146482619.1|5819189_5820446_+|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|274856
NZ_CP042266.1|WP_146482610.1|5802682_5803675_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|223521
NZ_CP042266.1|WP_146484584.1|5815538_5816747_+|type-VII-secretion-associated-serine-protease-mycosin	unknown	unknown	gnl|CDD|274856
NZ_CP042266.1|WP_146482612.1|5805638_5807510_-|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173853

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146482605.1|5800097_5800307_+|DUF397-domain-containing-protein	gnl|CDD|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	0.00013615
NZ_CP042266.1|WP_146482620.1|5820514_5820880_+|WXG100-family-type-VII-secretion-target	gnl|CDD|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	1.01469e-06
NZ_CP042266.1|WP_146482609.1|5801744_5802725_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	5.34407e-118
NZ_CP042266.1|WP_146484582.1|5804555_5805545_-|ABC-transporter-permease-subunit	gnl|CDD|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.83099e-106
NZ_CP042266.1|WP_146482616.1|5813934_5815455_+|type-VII-secretion-protein-EccB	gnl|CDD|368288	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B. EccB is a family of largely Gram-positive bacterial transmembrane componenets of the type VII secretion system characterized in Mycobacterium tuberculosis, systems ESX1-5. Translocation of virulent peptides through the membranes is thought to be mediated via a complex that includes EccB, EccC, EccD, EccE, and MycP. EccB, EccC, EccD, and EccE form a stable complex in the mycobacterial cell envelope.	1.07017e-68
NZ_CP042266.1|WP_146482611.1|5803671_5804559_-|ABC-transporter-permease-subunit	gnl|CDD|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.10353e-88
NZ_CP042266.1|WP_146482614.1|5811119_5811353_-|DUF397-domain-containing-protein	gnl|CDD|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	6.03467e-10
NZ_CP042266.1|WP_146484583.1|5812377_5813547_-|type-VII-secretion-protein-EccE	gnl|CDD|274857	TIGR03923, T7SS_EccE, type VII secretion protein EccE. This model represents the transmembrane protein EccB of the actinobacterial flavor of type VII secretion systems. Species such as Mycobacterium tuberculosis have several instances of this system per genome, designated EccE1, EccE2, etc. This model represents a conserved core region, and many members have 200 or more additional C-terminal residues. [Protein fate, Protein and peptide secretion and trafficking].	3.68455e-33
NZ_CP042266.1|WP_146482618.1|5817394_5819164_+|hypothetical-protein	gnl|CDD|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	3.59295e-08
NZ_CP042266.1|WP_146482621.1|5820945_5821245_+|WXG100-family-type-VII-secretion-target	gnl|CDD|274862	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target. Members of this protein family include secretion targets for the two main variants of type VII secretion systems (T7SS), one found in the Actinobacteria, one found in the Firmicutes. This model was derived through iteration from pfam06013. The best characterized member of this family is ESAT-6 from Mycobacterium tuberculosis. Members of this family usually are ~100 amino acids in length but occasionally have a long C-terminal extension.	1.56449e-11
NZ_CP042266.1|WP_146482606.1|5800491_5800755_-|GntR-family-transcriptional-regulator	gnl|CDD|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	1.47868e-21
NZ_CP042266.1|WP_146482619.1|5819189_5820446_+|S8-family-serine-peptidase	gnl|CDD|274856	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin. Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair].	2.68703e-72
NZ_CP042266.1|WP_146482610.1|5802682_5803675_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.37854e-141
NZ_CP042266.1|WP_146484584.1|5815538_5816747_+|type-VII-secretion-associated-serine-protease-mycosin	gnl|CDD|274856	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin. Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair].	3.38216e-94
NZ_CP042266.1|WP_146482612.1|5805638_5807510_-|peptide-ABC-transporter-substrate-binding-protein	gnl|CDD|173853	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel/dipeptide/oligopeptide transport systems, which function in the import of nickel and peptides, and other closely related proteins. The oligopeptide-binding protein OppA is a periplasmic component of an ATP-binding cassette (ABC) transport system OppABCDEF consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Similar to the ABC-type dipeptide and oligopeptide import systems, nickel transporter is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, which is the initial nickel receptor that controls the chemotactic response away from nickel. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand binding domains of ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	4.24269e-102

Protein sequences

>NZ_CP042266.1|WP_146482612.1|5805638_5807510_-|peptide-ABC-transporter-substrate-binding-protein
MVTTVPSHPPTPPGPGPAPRPHRRLRRYALGAAGTLLAVPPLPAAAAGHPDGGGQKKVLTIAVSQSVDSLSPFLAQRLVSTSIHRLAYEYLTNYDVKDGRPAPGLATSWTSSPSKLIWTYTIRRDSRWSDGRPVTAADAAWTFNKIMSDEGAATASGSFTTNFRKVTAPDPGTLVVELKRPQATMLALDIPIVPRHIWEKVRSIPAFTNDRQFPIVGSGPFVITDFKVDRHLRLRANRDFWQGAPHFDELLLKYYKDGDAAVAALRKGEVSFVQGLTPAQAAALKSMRNIRVNDAPGRRFLALATNPGARSRDGNTFGSGHPALLDPAVRRALFHAVDRTALVTRVFRGHAEEGEGYIPPRYTSYHWKPAAGQRIGYDPARAAALLDRAGYRRTAGGKRTGRNGRPLSFRILCHATDPNDRAIGKYLQEWWGALGIGLRVDCLDNVSDPWLKGDYDLAFDGWSVNPDPDFALAIHTCAALPATPADTGSTDNFICDRRYDELYRAQAAEYEPTARAELVKRLQSRLYDTGFMNVIAYPNAVEAYRTDHIQSITTMPEAAGNIWGQDGYWSWWSAKPAAGAGDGGPDDDAAGGLLLGLGAGLVPAVVLTVLVVMRRRATVEDRE
>NZ_CP042266.1|WP_146484582.1|5804555_5805545_-|ABC-transporter-permease-subunit
MRVRARAYLPYLAGKLGAAAVSLLAVLVTGFFLFRIVPGDPVKAMTHGTPTSAEQLAVLRRQFGLDEPLWRQFTEYCAGALTGDLGTSYQFRAPVGELIAAKLPATLLLTGVAVVLYSAVGLWLGTRSAWRHGRLGDRLHTGVALTLWSVPSFWLGLLLIMTFSVGAGPVPGLFPTGGMESGGTSGFGYVLDVAHHMVLPVLTLVAVGYAQTLLVMRASLLDEMGGDYLTTARAKGLRDAVVRRRHAVPNALLPTVTMVFINLGHVAAGSILVETVFSWPGLGGLFYQALSVPDLPLVQGLFVVFAGAMILMNLLADLLYPFLDPRVAR
>NZ_CP042266.1|WP_146482611.1|5803671_5804559_-|ABC-transporter-permease-subunit
MSSSLARARRRASAGRFWRAYRARRAGLAGLAALALITLAALAAPLLAGDDVQSVTRAPGGPLEPPSAEFPLGTDQFGRPLLGLLVWGARISLTVGLLAAALSVAIGTLVGVVAGHFGGRFSAVLMRITDWFLVMPTLVLAIVLATVMSRSAWTVVVAIGVTSWPTTARLVRAQTIAVESRPYIERARALGGGHRHVMSRHVLPNVMPLVLAQTTLGISTAILTEATLAFLGLGDPTVVSWGGMLQDAREAGAVSAGHWWYLAPPGLAIASVALAFTLCGRAVESVLNPKLGAGS
>NZ_CP042266.1|WP_146482610.1|5802682_5803675_-|ATP-binding-cassette-domain-containing-protein
MTTTPLLRVRDLRVTYGSGSDAVPAVRGVDLDLAAGEKLGIAGESGCGKSTLALALLRLLPPAATVEGRVLLNGEDVLTMRWGRLRAVRWAGASLVFQGAMHSLNAVHRIGDQIAEPVLLHHRTTPARARERVATLLRQVGLPADRARAYPHELSGGQRQRVMIAMALACDPQLIIADEPTTALDVMIQAQILRLIGQLVAEQRIGLVMISHDLAVLADTCDRLAVMYAGRVVEDGPARAVHTRARHPYGRALAAAFPRVGDPASRRAPRGLPGDPPDPAALPGGCAFRPRCPVPVAACADREPALAPVGDERHRVACVVTAAEEGGPLC
>NZ_CP042266.1|WP_146482609.1|5801744_5802725_-|ATP-binding-cassette-domain-containing-protein
MCRDGCRGRRAPVLSAEDLHISFPGRRGGPAARAVDGVDLTVGAGEIVALVGESGCGKTTLARALLGLVPPTSGTVSFDGRPLDYSPRALKAYRRRAQLVLQDPTGSLNPRHTVYDAVAEGLRVHRAHRVPEDERAAVARALSLAGLRPPERFFLRYPHELSGGQRQRVVIAGALVLEPALIVADEPVASLDASVRGEILALLLRLRAELGLSALIVTHDLGLAWNIADRVAVMYLGRVVESGPVETVLTAPRHPYTKALLSVLPESPLPPTVLTGEPPDPTRIPPGCRFHARCPALAAGAAGVAARCVAEPLPRLRGEGVACHLP
>NZ_CP042266.1|WP_146482608.1|5801252_5801450_+|hypothetical-protein
MTRDAFVNDVPEPFTAWCVRCGRQTSAPVEVGVMDRGSSAPLMQYACPEDATRYGAGPTPSDVIR
>NZ_CP042266.1|WP_146482607.1|5801058_5801256_+|hypothetical-protein
MHVLARTMPTREQFRVPPYMAEWSARQEREEQRRWERRIALALADIGIDYPYTAENVHQVTGAAA
>NZ_CP042266.1|WP_146482606.1|5800491_5800755_-|GntR-family-transcriptional-regulator
MMEYDPTRPKWQQIADVLRQRIFSGEYPPRHQLSEVQMESEFGVARVTIRKATAALREQGLITTVTGMGSFVADPDGWNEEDDQGGV
>NZ_CP042266.1|WP_146482605.1|5800097_5800307_+|DUF397-domain-containing-protein
MHTAPGFKFVSAAACRDPKVGNCPQVATNIPGVVALRDSERPDTIVTMTPDQWVTLTDAVKAGEFDLSA
>NZ_CP042266.1|WP_146482604.1|5799544_5799964_+|hypothetical-protein
MTAPDEGATLVCGEELVVFEEIRELVIPCFPSEDPARIKARIRCPLSSRHAGRHTGLVWELVKSKPGNVWLTWCRIGSAYEWGMHARSSCPKRHDGGTDCGLYEGHDLGRSYEPTDEQTAFIAAAGAAHFLRRNNAENC
>NZ_CP042266.1|WP_146482614.1|5811119_5811353_-|DUF397-domain-containing-protein
MGSAQEKDELYALDISGVEWQSAPGTSEDEERVEIAHLPGGGVAMRSSLDPDTVLRYTAAEWEAFVLGARDGEFDLR
>NZ_CP042266.1|WP_146482615.1|5811673_5812381_-|hypothetical-protein
MRAARSPRRPAGPRHPGHTMAAVDLGALSLPVGDDGVVIGDDAEGRPLMVGFHRSTPYDVLLIGGLWTAQVLALRAAGTGARVAVETGRPQAWTTLAQAAGAGLDCITLHEVGRVPPMGATVGSPVVVIRDCGMRPPRGRVVSAPWQSVLTLLPYLSPVAPRLLRAATLVGVQRVSPQEAGQIGRILGLAETESGALPTLADGVTLWSAGAERNWVMTSGTDAETGLLGVARRMD
>NZ_CP042266.1|WP_146484583.1|5812377_5813547_-|type-VII-secretion-protein-EccE
MRQLVLVEIALVIGALGAVAGGLWLVPAAAVAAVLVVLAFLRRRGQAVQDWITTALALRSRRGTAGPAAAGTDPSLAPVVEGVPGLRPYPYVDKNRRTVGMLGDGGFLTAVVRVEASGAALRPAFGARALPLALLGGALEVDDIVVESVQLVQQVRSAPAPHLPQQSVARLSYAPLQEKTGAPALRMTWVAVKLDPERCREAVEARGGGVEGAQRCLVRVADHVASRVTGAGFSAVVLDQQELNSTLATAACASPRLAARASRPDAVPQQRTAESARVWRCDDRWHTTYAVGRWPELGRGAAPLPKLVALLTAAPAYATTFSLTLRRGGHRGALSMAGHVRVTGGSDTELIGVRRTLEQHARTGRVSLVRLDREQLPGALATLPLGGAR
>NZ_CP042266.1|WP_146482616.1|5813934_5815455_+|type-VII-secretion-protein-EccB
MASRRDELNAYTFAKRRLIAQFLQPNTTGSEEGAPKPLRAVVPGAIIGVVILAGFGAWGMFKPVAPKGWDKPRENVIIASKSTTRYVVVETGKKKQLHPVLNMASAKLLLNLDRGKVIKVDESVLDSGKIPHGATLGIPYAPDRLPKAKDAGSAKRWAVCERPGQGGRAIQKAAFVLADREKDSVDGERRLTGGQLLYVESGKDRYIVDAAGTAYPVDDDEALLRQLVGQNRQPQRVSPQWLATLHKGDRITFPEVPGTPGEGAGVPGGLERGANRVGMILKATDGTEEQHYVVLEGRIAPITDFMAKLLLNSSDRKLIGLGQNGRATQVSAGAFQPGKAFGDDRKWPGESPAAVNTPALGEGSRNTVCSVLREVAEDGRTTLSTWAGTDFPAELPTGSASAYVTPGSGLLFRQFQGSATEAGALFLVTDTGLRYAMQSNSDSATDDSGIGTTETEKKEQETQTQLAQRQLGYKDVTPVPVPVAWSAFLPTGPRLSTGAANEPQGS
>NZ_CP042266.1|WP_146484584.1|5815538_5816747_+|type-VII-secretion-associated-serine-protease-mycosin
MALGAATALAAVAVPVTAGPAVAESAQCEYPGRPYKGRPWSLQRVLLDELWEQSTGKGVKVAVIDTGVDIRHPQLKAAVDAKNGLNLLPAKNKKGEKLERGAANGTSDEVGHGTKVAGIIAARSAPGTGFVGLAPGATIIPIKQNDAEGNGDAASLTEAINEAVDRGAGVINISQDTANAVAPARSLEHAVKRALNEGVVVVASAGNDGLGGNVKKTYPASYEGVLAVASSDRNNERAAFSQSGDFVGVAAPGIDMITTVPLRGHCADNGTSFSAPYVAAVAALVKAKHPDWTPRQIVAQIQQTAERSTPGHDRLVGWGVVDPVRALTEDERPIERPVAQEGLTKGEAPSPARFDLGETAEERNSRLATYVVIGGGVLVATIGGAAVALRDARRRSSRVAGG
>NZ_CP042266.1|WP_146482617.1|5816914_5817391_+|hypothetical-protein
MVYPADGGGGGGSRRRGDFEKGYLALTTFQKRVNTLLATFNESAAGKSKIAQQTVSRQSLSGPGAPFAEADGLFHQYNRVHQALISLSRSLADQIDAFGIAVHAADVGTDNVDEERRIRFAQIQARLDQERTAERERERPKADEPKNVNEKNAGTEWR
>NZ_CP042266.1|WP_146482618.1|5817394_5819164_+|hypothetical-protein
MTDNDKQPEPTPAEQHEKDLARVERQLDVTDVARKVTSIFGGNGFFARTDFEGHELNIMIDMVLNANPADLESAGDNLWNARKDLRDAAEELRTNIKEVHWEGASGEAFRDFGRALADHADQLGTFADIAATQIRVAGTGLASVRSSMPERDLRLIKHNAKTMPLPERIDTNPDYVAAKKVEKNRQEAINQMNRLASFYAVSEQTLAGQEPPTFSKVLNADVPRPSGEVIDDPSVIGRRPRGLSESPRNGTASERREGSRGTGENRRPETVGAPPLGTPERNPSMELDSAAPPPTTPNSVTPVAPSPGPIGGPPTVPGPSTVPPVPGASPGKFGPGPSALSPTVSKATGGPGLGGGKAVAAGAGGHPGAQGRPGIVGGGPSATGGSNPTGRPTGPMGGGSAASSTGRANPPGMGSAMGGQGPMTGRGGTAAQPMGGRTPSSSAGSRAGRDGIVGGTPQRAPGGASGPRIPRGNVVGAEGQTAARSGTARPGQAGVVGAGPVTGASRATGGGTPSSHGVVGRPKAENGSFSRPGQGSFTTGGAGLVGGRPGRNPSGSEGDRTESARPDYLTEDEETWTAQRRNAGPPVIE
>NZ_CP042266.1|WP_146482619.1|5819189_5820446_+|S8-family-serine-peptidase
MTAGMIQMRKQSMPRALRQGMLCTLAAACVWAGGAVGAAPTAAAAGQPGQWYLDAMGVAEMWKVTTGKGITVAVVDTGVNATTPSLRGQVVKGFDATEAAGAETDDYDGHGTTMAEMIAGTGKGGGLQGLAPGAKIMPMRIANTEFQNENKVNAQDSADAIKAAADSEAKIINVSFASEFSTAQERAAVEYAHGKGKLIFAGAGNNAKSGNKPQYPASYPDAIGVASADKKGTVAEHSQHGDNVDITAPGTDVPVWCDDSFKEYCKGSGTSAATAIASASAALVWSANPDWTANQVLRALIDTAGRSWAKGTRSNFLGHGLIRPAQIVVDKKGDPGAPDISPLTNRKTGGSPAASAPPSAPASSQPPKSNTEDGTAVAGSSEKAEKKDDSNTGLIAGGVAVVFVLAGGAFFFLRRRAA
>NZ_CP042266.1|WP_146482620.1|5820514_5820880_+|WXG100-family-type-VII-secretion-target
MSAVQKVGDQSLKDFQDEISRQFEDIKGQLQGLQGVIDSLEGSWKGIGAGAFDAKQAEINQGMVRIAKLLLNFQEAIQVTRTTASNTEDEVRAALQGVDVTAGFSGDAGATRTATSNISGY
>NZ_CP042266.1|WP_146482621.1|5820945_5821245_+|WXG100-family-type-VII-secretion-target
MAQGNDGVMLVTYSSLEQAASTIEKQAQRLDQTLEDLQSKIRSVSATFEGDAKTAADAAHKKWDNETRQIHNALKGIARAVREAGPAYQAGDKKAAGNF

Crispr_ID: NZ_CP042266_16

• CRISPR_ID: NZ_CP042266_16
• CRISPR_location: 7607043-7607970
• CRISPR_type: TypeI-E
• Repeat_type: NA
• Spacer_info: 15 spacers
• Cas_protein_info: cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2

Consensus repeat of NZ_CP042266_16

Consensus_repeat	Method
CGGAACACCCCCACGCGGTGGGGAGGAC	PILER-CR
CGGAACACCCCCACGCGGTGGGGAGGAC	CRISPRCasFinder
CGGAACACCCCCACGCGGTGGGGAGGAC	CRT

spacers of NZ_CP042266_16

>16.1|7607071|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
ATGACGGCAACCACGAGCACCGTGAAGAGAAT
>16.2|7607131|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GGCATGGTCGTCTCGGTGTACGGCATGTGGGG
>16.3|7607191|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GCGATGCTGGAAGGCACGGCCTGGGCGCTCAC
>16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
AGCCGGGGCATAGCGCGGAACGCGGCCGTCAG
>16.5|7607311|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
CTACGAGCGAGCGGTGGAGGCGGCTGCCTAGC
>16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GTCTCTTCCGTCCCTGCGACCGGCAGCCCGCA
>16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GGGTTCGGCCTGCCGGTCATCGCTGCCTACTA
>16.8|7607491|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
ACTCATCCGGACAGCCGTTGCCAGCAAGGAAG
>16.9|7607551|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
CGCACGGAGGACATCGCACGCCTGCACAGCAC
>16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
CGGTCCTTCACCGGCGAGTCCGTCGGCGTCCA
>16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GACGGCGCCGAGGAGGGCGAGGAGGAGGCCGG
>16.12|7607731|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
CCGGGCGAGGTGCACTCTCACGTACGGCTCGT
>16.13|7607791|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
GTCGTCTCCACCGGATCCGACGGCGCCGTCCG
>16.14|7607851|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
TGACACGCCATGAAACACGTCGTCACAGGTTC
>16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT
AAACCGATCCTCACCATCATCATCTGCACCGG

CRISPR arrays and Neighbor proteins around NZ_CP042266_16

CRISPR arrays

The CRISPR arrays of NZ_CP042266_16

>merge|NZ_CP042266|16|7607043-7607970|PILER-CR,CRISPRCasFinder,CRT
CGGAACACCCCCACGCGGTGGGGAGGACATGACGGCAACCACGAGCACCGTGAAGAGAATCGGAACACCCCCACGCGGTGGGGAGGACGGCATGGTCGTCTCGGTGTACGGCATGTGGGGCGGAACACCCCCACGCGGTGGGGAGGACGCGATGCTGGAAGGCACGGCCTGGGCGCTCACCGGAACACCCCCACGCGGTGGGGAGGACAGCCGGGGCATAGCGCGGAACGCGGCCGTCAGCGGAACACCCCCACGCGGTGGGGAGGACCTACGAGCGAGCGGTGGAGGCGGCTGCCTAGCCGGAACACCCCCACGCGGTGGGGAGGACGTCTCTTCCGTCCCTGCGACCGGCAGCCCGCACGGAACACCCCCACGCGGTGGGGAGGACGGGTTCGGCCTGCCGGTCATCGCTGCCTACTACGGAACACCCCCACGCGGTGGGGAGGACACTCATCCGGACAGCCGTTGCCAGCAAGGAAGCGGAACACCCCCACGCGGTGGGGAGGACCGCACGGAGGACATCGCACGCCTGCACAGCACCGGAACACCCCCACGCGGTGGGGAGGACCGGTCCTTCACCGGCGAGTCCGTCGGCGTCCACGGAACACCCCCACGCGGTGGGGAGGACGACGGCGCCGAGGAGGGCGAGGAGGAGGCCGGCGGAACACCCCCACGCGGTGGGGAGGACCCGGGCGAGGTGCACTCTCACGTACGGCTCGTCGGAACACCCCCACGCGGTGGGGAGGACGTCGTCTCCACCGGATCCGACGGCGCCGTCCGCGGAACACCCCCACGCGGTGGGGAGGACTGACACGCCATGAAACACGTCGTCACAGGTTCCGGAACACCCCCACGCGGTGGGGAGGACAAACCGATCCTCACCATCATCATCTGCACCGGCGGAACACCCCCACGCGGTGGGGAGGAC

>NZ_CP042266|16|6|7607043-7607970|PILER-CR
CGGAACACCCCCACGCGGTGGGGAGGAC	ATGACGGCAACCACGAGCACCGTGAAGAGAAT
CGGAACACCCCCACGCGGTGGGGAGGAC	GGCATGGTCGTCTCGGTGTACGGCATGTGGGG
CGGAACACCCCCACGCGGTGGGGAGGAC	GCGATGCTGGAAGGCACGGCCTGGGCGCTCAC
CGGAACACCCCCACGCGGTGGGGAGGAC	AGCCGGGGCATAGCGCGGAACGCGGCCGTCAG
CGGAACACCCCCACGCGGTGGGGAGGAC	CTACGAGCGAGCGGTGGAGGCGGCTGCCTAGC
CGGAACACCCCCACGCGGTGGGGAGGAC	GTCTCTTCCGTCCCTGCGACCGGCAGCCCGCA
CGGAACACCCCCACGCGGTGGGGAGGAC	GGGTTCGGCCTGCCGGTCATCGCTGCCTACTA
CGGAACACCCCCACGCGGTGGGGAGGAC	ACTCATCCGGACAGCCGTTGCCAGCAAGGAAG
CGGAACACCCCCACGCGGTGGGGAGGAC	CGCACGGAGGACATCGCACGCCTGCACAGCAC
CGGAACACCCCCACGCGGTGGGGAGGAC	CGGTCCTTCACCGGCGAGTCCGTCGGCGTCCA
CGGAACACCCCCACGCGGTGGGGAGGAC	GACGGCGCCGAGGAGGGCGAGGAGGAGGCCGG
CGGAACACCCCCACGCGGTGGGGAGGAC	CCGGGCGAGGTGCACTCTCACGTACGGCTCGT
CGGAACACCCCCACGCGGTGGGGAGGAC	GTCGTCTCCACCGGATCCGACGGCGCCGTCCG
CGGAACACCCCCACGCGGTGGGGAGGAC	TGACACGCCATGAAACACGTCGTCACAGGTTC
CGGAACACCCCCACGCGGTGGGGAGGAC	AAACCGATCCTCACCATCATCATCTGCACCGG
CGGAACACCCCCACGCGGTGGGGAGGAC

>NZ_CP042266|16|14|7607043-7607970|CRISPRCasFinder
CGGAACACCCCCACGCGGTGGGGAGGAC	ATGACGGCAACCACGAGCACCGTGAAGAGAAT
CGGAACACCCCCACGCGGTGGGGAGGAC	GGCATGGTCGTCTCGGTGTACGGCATGTGGGG
CGGAACACCCCCACGCGGTGGGGAGGAC	GCGATGCTGGAAGGCACGGCCTGGGCGCTCAC
CGGAACACCCCCACGCGGTGGGGAGGAC	AGCCGGGGCATAGCGCGGAACGCGGCCGTCAG
CGGAACACCCCCACGCGGTGGGGAGGAC	CTACGAGCGAGCGGTGGAGGCGGCTGCCTAGC
CGGAACACCCCCACGCGGTGGGGAGGAC	GTCTCTTCCGTCCCTGCGACCGGCAGCCCGCA
CGGAACACCCCCACGCGGTGGGGAGGAC	GGGTTCGGCCTGCCGGTCATCGCTGCCTACTA
CGGAACACCCCCACGCGGTGGGGAGGAC	ACTCATCCGGACAGCCGTTGCCAGCAAGGAAG
CGGAACACCCCCACGCGGTGGGGAGGAC	CGCACGGAGGACATCGCACGCCTGCACAGCAC
CGGAACACCCCCACGCGGTGGGGAGGAC	CGGTCCTTCACCGGCGAGTCCGTCGGCGTCCA
CGGAACACCCCCACGCGGTGGGGAGGAC	GACGGCGCCGAGGAGGGCGAGGAGGAGGCCGG
CGGAACACCCCCACGCGGTGGGGAGGAC	CCGGGCGAGGTGCACTCTCACGTACGGCTCGT
CGGAACACCCCCACGCGGTGGGGAGGAC	GTCGTCTCCACCGGATCCGACGGCGCCGTCCG
CGGAACACCCCCACGCGGTGGGGAGGAC	TGACACGCCATGAAACACGTCGTCACAGGTTC
CGGAACACCCCCACGCGGTGGGGAGGAC	AAACCGATCCTCACCATCATCATCTGCACCGG
CGGAACACCCCCACGCGGTGGGGAGGAC

>NZ_CP042266|16|6|7607043-7607970|CRT
CGGAACACCCCCACGCGGTGGGGAGGAC	ATGACGGCAACCACGAGCACCGTGAAGAGAAT
CGGAACACCCCCACGCGGTGGGGAGGAC	GGCATGGTCGTCTCGGTGTACGGCATGTGGGG
CGGAACACCCCCACGCGGTGGGGAGGAC	GCGATGCTGGAAGGCACGGCCTGGGCGCTCAC
CGGAACACCCCCACGCGGTGGGGAGGAC	AGCCGGGGCATAGCGCGGAACGCGGCCGTCAG
CGGAACACCCCCACGCGGTGGGGAGGAC	CTACGAGCGAGCGGTGGAGGCGGCTGCCTAGC
CGGAACACCCCCACGCGGTGGGGAGGAC	GTCTCTTCCGTCCCTGCGACCGGCAGCCCGCA
CGGAACACCCCCACGCGGTGGGGAGGAC	GGGTTCGGCCTGCCGGTCATCGCTGCCTACTA
CGGAACACCCCCACGCGGTGGGGAGGAC	ACTCATCCGGACAGCCGTTGCCAGCAAGGAAG
CGGAACACCCCCACGCGGTGGGGAGGAC	CGCACGGAGGACATCGCACGCCTGCACAGCAC
CGGAACACCCCCACGCGGTGGGGAGGAC	CGGTCCTTCACCGGCGAGTCCGTCGGCGTCCA
CGGAACACCCCCACGCGGTGGGGAGGAC	GACGGCGCCGAGGAGGGCGAGGAGGAGGCCGG
CGGAACACCCCCACGCGGTGGGGAGGAC	CCGGGCGAGGTGCACTCTCACGTACGGCTCGT
CGGAACACCCCCACGCGGTGGGGAGGAC	GTCGTCTCCACCGGATCCGACGGCGCCGTCCG
CGGAACACCCCCACGCGGTGGGGAGGAC	TGACACGCCATGAAACACGTCGTCACAGGTTC
CGGAACACCCCCACGCGGTGGGGAGGAC	AAACCGATCCTCACCATCATCATCTGCACCGG
CGGAACACCCCCACGCGGTGGGGAGGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042266.1|WP_146483744.1|7599888_7601688_-|murein-biosynthesis-integral-membrane-protein-MurJ	unknown	unknown	gnl|CDD|240528
NZ_CP042266.1|WP_006346021.1|7615896_7616547_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl|CDD|378050
NZ_CP042266.1|WP_146484736.1|7613427_7614003_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	pfam09485_cse2gr11_CAS-I-E	gnl|CDD|378191
NZ_CP042266.1|WP_146483740.1|7594110_7594866_-|trypsin-like-serine-protease	unknown	unknown	gnl|CDD|214473
NZ_CP042266.1|WP_146483750.1|7611679_7613266_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	gnl|CDD|187860
NZ_CP042266.1|WP_146484737.1|7616603_7617545_+|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl|CDD|274693
NZ_CP042266.1|WP_146483743.1|7599173_7599857_-|response-regulator	unknown	unknown	gnl|CDD|223816
NZ_CP042266.1|WP_146483748.1|7604978_7605944_+|pirin-family-protein	unknown	unknown	gnl|CDD|224655
NZ_CP042266.1|WP_146483742.1|7596907_7597549_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146483751.1|7613999_7615133_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl|CDD|378153
NZ_CP042266.1|WP_146483745.1|7601612_7602809_-|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	unknown	unknown	gnl|CDD|225224
NZ_CP042266.1|WP_146483746.1|7603173_7604388_+|L,D-transpeptidase-family-protein	unknown	unknown	gnl|CDD|380079
NZ_CP042266.1|WP_146483741.1|7595162_7596722_+|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl|CDD|187556
NZ_CP042266.1|WP_146483754.1|7619668_7620064_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_146483749.1|7608208_7611052_+|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl|CDD|182031
NZ_CP042266.1|WP_146483753.1|7619272_7619581_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042266.1|WP_006346019.1|7617544_7617862_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl|CDD|378244
NZ_CP042266.1|WP_146483752.1|7615129_7615900_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl|CDD|273842
NZ_CP042266.1|WP_146484735.1|7597548_7598985_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|223715
NZ_CP042266.1|WP_146483747.1|7604464_7604800_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP042266.1|WP_006346021.1|7615896_7616547_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	3.1e-39	130.0	0.0
NZ_CP042266.1|WP_146484736.1|7613427_7614003_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	pfam09485_cse2gr11_CAS-I-E	4.3e-26	86.7	2.8
NZ_CP042266.1|WP_146483752.1|7615129_7615900_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	9.7e-49	160.3	0.2
NZ_CP042266.1|WP_146483750.1|7611679_7613266_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	pfam09481_cas8e_CAS-I-E	4.4e-74	244.8	3.1
NZ_CP042266.1|WP_146483749.1|7608208_7611052_+|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	2.7e-51	169.4	0.0
NZ_CP042266.1|WP_146484737.1|7616603_7617545_+|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	1.3e-99	327.4	0.0
NZ_CP042266.1|WP_006346019.1|7617544_7617862_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	2.4e-33	108.9	0.0
NZ_CP042266.1|WP_146483751.1|7613999_7615133_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	2.2e-98	324.8	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042266.1|WP_146483744.1|7599888_7601688_-|murein-biosynthesis-integral-membrane-protein-MurJ	gnl|CDD|240528	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli MurJ (MviN) has been identified as essential for murein biosynthesis. It has been suggested that MurJ functions as the peptidoglycan lipid II flippase which is involved in translocation of lipid-anchored peptidoglycan precursors across the cytoplasmic membrane, though results obtained in Bacillus subtilis seem to indicate that its MurJ homologs are not essential for growth. Some MviN family members (e.g. in Mycobacterium tuberculosis) possess an extended C-terminal region that contains an intracellular pseudo-kinase domain and an extracellular domain resembling carbohydrate-binding proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.08141e-117
NZ_CP042266.1|WP_006346021.1|7615896_7616547_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl|CDD|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.15808e-46
NZ_CP042266.1|WP_146484736.1|7613427_7614003_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl|CDD|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	3.16328e-16
NZ_CP042266.1|WP_146483740.1|7594110_7594866_-|trypsin-like-serine-protease	gnl|CDD|214473	smart00020, Tryp_SPc, Trypsin-like serine protease. Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.	1.17502e-28
NZ_CP042266.1|WP_146483750.1|7611679_7613266_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl|CDD|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	1.23194e-61
NZ_CP042266.1|WP_146484737.1|7616603_7617545_+|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.67455e-122
NZ_CP042266.1|WP_146483743.1|7599173_7599857_-|response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	7.98902e-82
NZ_CP042266.1|WP_146483748.1|7604978_7605944_+|pirin-family-protein	gnl|CDD|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	3.05227e-58
NZ_CP042266.1|WP_146483751.1|7613999_7615133_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl|CDD|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.27356e-122
NZ_CP042266.1|WP_146483745.1|7601612_7602809_-|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein	gnl|CDD|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	2.41351e-27
NZ_CP042266.1|WP_146483746.1|7603173_7604388_+|L,D-transpeptidase-family-protein	gnl|CDD|380079	pfam17964, Big_10, Bacterial Ig domain. This entry represents a bacterial Ig-like domain found associated with transpeptidase domains.	2.43499e-71
NZ_CP042266.1|WP_146483741.1|7595162_7596722_+|SDR-family-NAD(P)-dependent-oxidoreductase	gnl|CDD|187556	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2. This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.02355e-142
NZ_CP042266.1|WP_146483749.1|7608208_7611052_+|CRISPR-associated-helicase-Cas3'	gnl|CDD|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.06922e-79
NZ_CP042266.1|WP_006346019.1|7617544_7617862_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl|CDD|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	6.06323e-38
NZ_CP042266.1|WP_146483752.1|7615129_7615900_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl|CDD|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	3.46199e-47
NZ_CP042266.1|WP_146484735.1|7597548_7598985_-|HAMP-domain-containing-protein	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.45594e-46
NZ_CP042266.1|WP_146483747.1|7604464_7604800_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.5075e-05

Protein sequences

>NZ_CP042266.1|WP_146483748.1|7604978_7605944_+|pirin-family-protein
MSNLDRQAALSVCGGRGFVVAEPVRELLSPRTVRLGESTEVRRLLPNLGRRMVGAWAFVDHYGPDDIADEPGMQVPPHPHMGLQTVSWLHQGEVLHRDSTGSLATIRPRELGLMTSGRAISHSEESPRSHARYLHGAQLWVALPDAHRHADPHFEHHPKLPNVTAPGLTATVILGSLDGATSPGTAYTPIVGADLTLTHGADPRLPLDPDFEYAVLSMSGEVVVDGVPVLPGSMLYLGCGRTELPLRAESDAGLMLLGGEPFEEELIMFWNWIGRSNEDIVQARQDWMEGTRFGEVKGYDGDPLPAPELPPVPLKPRGRVR
>NZ_CP042266.1|WP_146483747.1|7604464_7604800_-|tetratricopeptide-repeat-protein
MSETYYEFGTPAERWDRAQMFFDSKEYLTAARILSGLIEEAPEQLAPRLLLARAYYHSARLGPAETELRAVLERNPAEYYARLMLGRTLERQGRAAEAAPHLRMAAAMNGD
>NZ_CP042266.1|WP_146483746.1|7603173_7604388_+|L,D-transpeptidase-family-protein
MRPISARPVRHPATRLAVAAAVLAPLALAGCSSDGSGSGGDGKAGSAKAADKPATVAVTPSGSGAKAGQPIKVTAQGGKLTSVQVSDADGGTVTGKLSANGTVWTSDRKAGAGASYQVTAATKTESGTTGSAKAAFTTAKAEKKNLVTFWPLKGSTVGIGQPISLVFDFPVADRAEVEKALKVTTSNNTEGSWGWLKHYDGKDRIDWRPKEYWKPGTQVTLDAPLNGIATSKERMFARDYAMKFTIGAKEVVKVDLNKKKLVLERNGSPVRTIPVSGGTPGGEKRSWGGTTVLISKEGTINMNSETVGLGDAYNKMVDYSMRLTWSGMYAHAAPWNSSYFGRANKSSGCIGMSTGEAASFYKSVKVGTPFETTGRDTKGIPAQGNGFSNWNESWEQWKKRSALS
>NZ_CP042266.1|WP_146483745.1|7601612_7602809_-|peptidoglycan-bridge-formation-glycyltransferase-FemA/FemB-family-protein
MSALLVTGRDGRQDSVNPRTRLAPVDAATYRAFLASGHGAALGAGFLQCPSWAEVKEGWRSLLLGWGPDPSAGPAGLTGVALVLLRQLPGTRRSFAYLPEGPVADWSDPEPDAWLDPLLEHLRGAGVFAVRIGPSPAYRTWSGRALKSGTGPGRKLTDVLDCEVDPLGTAVAERLTARGWRRCGGADDGDAQPRHVFRVPLAGRSAEELWDGLNQEWRRNVRRARKEGVEVVVGSAAELPDFFRLLELTERRDGFRLGRSLAYYQRQYTALNTEEPGRMRLCLARHRGEILAAHTMVTVGRRVWYQTGASADHRREVRPSNALQWRMLMDAHASGAQVYDMRGVPSTLDPSDRSYGLLRWKLGTGGHVVETLGEWEKPLGGATNHALYRAFQAYLAHR
>NZ_CP042266.1|WP_146483744.1|7599888_7601688_-|murein-biosynthesis-integral-membrane-protein-MurJ
MGETAGRGHQPRAVPGVPGVSGTPVSPAHAAAPPAPETGEKKASSVARSGALMAAGSLVSRATGFVRSAVVAAALGIGLTADGYAVANAVPMILYMLLVGGALNAVFVPELVRAAKEHTDGGTAYTQRLLTVCAVALLVITGAAVAAAPQIVAVYTGYSGAQAEMTVAFARYCLPQIFFLGLFTVLGQVLNARDRFGAMMWTPVLNNIVVISVFGLYLVTGDGGALSSAERALLGWGTTAGIALQALALAPALRRAGFRWRPRFDWRGSGLTRPLRAAGWLVLLVLSNQAAYWVVTRLATMSGRRAAEQGIDGGAGFSAYTNAYTLWAVPHGIITVSLVTALLPRMSRAAADDDPMAVRRDVSYALRTSASMIVPAACALLALAQPVMTVVYGYGQTDPDDVALMAGILMAFAPGLVAFSGQYVLSRAFYALSDTRTPFFLNLVIVAVNAGLAVTAYLLLPARWVVTGLAGAYSAALLAGWLVTALVLRRRLLPPPVNVPGQRGRHGRRSRRRRPEPLWRSASAGTVTRLLVAAVPAAGLGHLTARVTGEAAGAPAAGVAGAVVIGAVFVALARPLRLTELDTAVSGAVRRLRRRPARG
>NZ_CP042266.1|WP_146483743.1|7599173_7599857_-|response-regulator
MPRVLLIEDDPSVREGVELGLQRRGHEVAAAATGEEGLAALPEFRPDLVLLDLMLPGVNGVEVCRRIRAAGQLPIIMLTARGDDFDVVIGLEAGADDYIVKPARTEVIEARIRAVLRRIEEPGAGRQTVERHGDLVLDRTGLTVTKSGQELALAPSELKLLLYLSAAPEQVFSRQQLLEQVWEHSYHGDARLVDACVRRLRNKVEDVPGSPRYIQTLRGFGYRFGPL
>NZ_CP042266.1|WP_146484735.1|7597548_7598985_-|HAMP-domain-containing-protein
MVFAFLFVALVTASSTAALTYREARNSVLHATQDTAVASFRDHVRGHPSLLPVDPGKLPTYLQELAALGKPRPWFVFAEYGTTVRVSSGSSPVSTVVTPALRERIKSRPYGAFQRVVKDGVPYLAVGMPVLLKSQPGMKLDSGLVLYAVLALDEEKMQIEALLTAARNGAVPGLAIALVPALLAARSVLRPVRELRRAALSMGSGKLDTRIAVRGRDELSDLARTFNETAAGLERSVTELREAEERARRFASDVSHELRTPLAGMLAVTEVLDEDAAGLDPDTARAVRLISTETGKLAVLVEDLMEISRFDARAAELNSDEVDVAETIRRTLANRHWTGRVGARLPDGIRARLDPRRFDVVMANLVGNALRHGGDPVAVTLRREAADDGSPLLAVEVTDGGPGIRPDVLPRVFDRFFKADAARTRSAGSGLGLAITAENVRLHGGTIHAANGPGGRGAVFTVTMPLDGGPRGRSREGE
>NZ_CP042266.1|WP_146483742.1|7596907_7597549_-|hypothetical-protein
MRGAHGTLRRSGRRAGALVLAVALLSGCGISGTEPIEAGGPGAIPVPTGPPWMLVFLESAEGALIPVYRERPPKGRITRPDQPMDEALQALFEGPTPMERDTGLRTALPRLPGAGPTGAARVDQRIAVKLPFRIASLSDTAVWQTICTAVYAVDPTGWTEVMLSGIDGTTVPTMCDAEVDSRRSGQRPELSSMGPGELGRWADDPDRQTVPPG
>NZ_CP042266.1|WP_146483741.1|7595162_7596722_+|SDR-family-NAD(P)-dependent-oxidoreductase
MSAEPTPAGGGLHCLVTGATGYIGGRLVPELLAAGHRVRAMARTPRALRDHAWADRAEVVRGDVTDAESVAAAMAGIDVAYYLVHALGTGKGFEETDRRAARIFGERARAAGVRRIVYLGGLTPAGVPERELSPHLRSRAEVGRILLDSGVPATVLRAAVIIGSGSASFEMLRYLTERLPVMITPRWVRTRIQPVAVRDVLRTLTASATMPPDVSRTFDVGGPDVLTYREMMLRYAAVAGLPRRLILPVPVLTPRLSALWVGLVTPVPGAIAHPLAESLRHEVVCQENDISRYVPEVPGHPLDFDTSVALALRRVRDAGVTTRWSSASVPGAPSDPLPTDPDWAGGSLYTDERERTVDAPAGELWRVVEGIGGENGWYSFPLGWAVRGHLDRLAGGVGLRRGRRDATRLRIGDSLDFWRVEEIEPGRLLRLRAEMRLPGLAWLELCCEPLGEGRARYRQRALFHPHGLLGHTYWWSVAPFHAFVFGGMARNITRAAAAGAGRPTAARGAAAGGTPPPGG
>NZ_CP042266.1|WP_146483740.1|7594110_7594866_-|trypsin-like-serine-protease
MRITRLIPALVAAAASVVTLAPAANAQAPAPAPAPAVGSAPSAAAGTAALPIIGGGYATDAPWAARLFSNGRQTCSATIIAPTWILTARHCVSGGGLSFRIGSLDQTSGGTVANGSAVYNHASSDLSLVRLDRSVAATYSPLGQPGSVSVNQTVQVFGWGATSQCGSEINCQSRYLKVAKVVVTGGCRDAYNGSAICARRGDGITAGGDSGGPMTANGVQVGVASTSDRQTITAYTNVTAYRPWIQSIAGV
>NZ_CP042266.1|WP_146483749.1|7608208_7611052_+|CRISPR-associated-helicase-Cas3'
MGVPRAMADESIWAKSRGLDPGLPPYPLVRHLVDAAAMALHLWDVYLSDGQRRTIERGLGLAGEPERARSLVGLCAGLHDIGKVSGFQFCSRHGREHLGTSFASGRRGMEADRLGHDVAGMEAAAEVLEVLGFDVEGSWATERVAEIIGGHHGRFHRNEAWGDSPFLGGLAWSQQRIAHASAVHGVLGAPVPPSSFDAPAAVLVTGVVILADWLVSQTHYLRARQRQLASSLEAHFARSVADAPGLLEGAGLVPVCLERVGFGEAYGIEGGPNPLQRSIMEELPGAVADGGGRGGVALITAAPGDGKTEGALTAEKVLAEAFGTRGLVFLLPTTATSDQMYGRVSKALVRQSGQGAGLTLVHSMAWLNSAYSDEELDPGSGVVTCDGDECAAGSSRAEADMRPRRWLRGPKRPLLAQFSVGTVDQALMAVLPVRHNALRLLGLSGRTVVVDEAHAYEPYMQVLLGRLLNWLGVYGVPVVLLSATLPVSVSERLLKEYLDGSGADCESREDLPSSAPYPGWLYVDGATGRRTPMSGRRRREQAAERNMELGLRVEPVGERGRLAVVERLVEPVARGEGGSALVVCNTVGDAQETYRRLRERFDDRSHEDGGIVHLLHARFPGNVREARTRGVTEGLGRGGPRPERRIVVATQVVEQSLDLDADLVVSDLAPLALLLQRAGRCWRHENWWARHGYPGDRGRPGWARAPRLVVLDPLVGTGTVPKRWGEVYSEYLLRLTSARLRSLDGGVVSIPDDVQELVESVHGTGVESFDWDAPGGEYQQSWAAHAGTEAAERGQAALVAVPRAREVRGLHDLHKLPGTEDEWEAATRLGAPSLRLLCAYVQQNGRATLDLAGHEVLPDPPKEQQGDTSIPVAAVRAVMRRTIPVSADWFRNAEANGLVSPPGSWEGHPMLGDVRVLYQPVRNGQAQTVDIGGMILRLDADLGLVRA
>NZ_CP042266.1|WP_146483750.1|7611679_7613266_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MLGYDLRDEPWIPVRLRSGEQRRFGFRELLRRAHEIADLELPVPPAASGLLRILAVMTASIGGQRGMRLDGTGTARDAASWYALRQRVLDQGLFDPEAVDSYFDDPSRSGRFDLFSDDYPFLQDPRLLKECVDSKGAPNPSGVNKLVFGRPTGINGAVLFGHFTDSEPIPVPAAEAAWHLIAQLYFGPSGQCTPRRITEERAGSGDAAPLRKSISYFPWAPELFTTLVLAVPSPQTGADREAQDFAAWEGELLHPLKPLPPLTSPRRLLTGRFRHAVLLMPSADRRTVTDAYITWSTHDKPAPVWDPFQILDRRKKGEFQPREADGARALWRDLDSLLLKDSRRDVQRPPALEYLPRSLRSQLRVRAYGFDQDGQQKDSVWFQATTPPVLQWQEEADRAMAYHVRSCHTAAEKAGERLEFAAMVAWRIASDSGTDISPKAKIKIDRRKPGPWAGAARSLYWPAAEREFWKLAAPQEAAAPVERPFVRAALDCLDEAIGPANRADIRVARARNRARAILLGLLPRPAAD
>NZ_CP042266.1|WP_146484736.1|7613427_7614003_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MVGLCEAPRTRAELRRGLGLPVERCNYLHRYLVPWTHDRDDPAKNMHPATKRAHYAVAALIAARPRVARAPQPLNGAAGDSGESARRVRADLGVSLGQAVSAKVIKPATAESTLHLMSRQSADSVHSTLPSLTRQLLSGGIAVDWAVLLDDLAWWDLRRDRIGSRWLESYFRTAYPENDTETPSATEENER
>NZ_CP042266.1|WP_146483751.1|7613999_7615133_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTLYLDLSVLQSVPAANLNRDDLGSPKQVRYGSTPRIRVSSQSWKRAIRHGVEEDLGEKAARTRLVPAQVSKALAGSSHNWPGELAEFAGQQVAASAGKKGIGTEKEGHTSALLFVPEAAITELVTVCTEHRDALEQNLGKKSPGKVLPPERIEAILKRRTASISLLGRMLAELPGANVDGAAQVAHAFTTHTAEPQRDYFTAVDDWHGQADTGSAHLDTAEFSAGVFYRYATVNVADLVTNLDGDADAARTVLTSFAEHFLYSLPQAKRTSSAPHTLPDLAYLAVRKHRPISLAAAFETPVTAHNGGFSQPSRTALAKYTENINRLTGNRGRDFHGHAAINPDEQLAGLGESHTSYDTLISTAVDAAFPATSGDAG
>NZ_CP042266.1|WP_146483752.1|7615129_7615900_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSGLLLRLAGPLQSWGERSAFTTIRDTASFPTRSGLIGMLAAAEGISRNQGGLERYDGLRFTIRTDRPGHRLVDFHTVGGGQPKARTAATSGGSNKGAAVITRRHYLSDAVFVVAVTTPDEKTATRLAEALDRPHWAPYLGRRSCVPDEPLVLRCHAPDPEEELLTRVPLARTTPPHHGEDTVGVEFLYESPPEDPAQAADTIDVTDIPLSFAQHARAHGVRRLHRVTRQLPLGLTGPQSELQDRLIEYARTEESA
>NZ_CP042266.1|WP_006346021.1|7615896_7616547_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MNDHPVLARISLNPHSREVQRDLRDATQMHRTVMRMVPDGLGASPRHRAGLLYRVDETDTASTLLVQAHRLDPAGLPNGYGHAQIKSLAPMFTALRAGLPVRYRIVVNPSKRERPPHADVNIRGRIVPLSGADADQWWHRRANTAGLDLHIITPTNVHPVRPRGAEAPPMRHSLLRYDGTAAVIDPAALTEALLNGIGRAKPYGAGLLSLAPATAS
>NZ_CP042266.1|WP_146484737.1|7616603_7617545_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MLPRVADSLSFLYLDMVRVLQDDTGVCAQIQASDDRTDTVYIPTAALSCLLLGPGVSITTPALTTLARHGTSVVCVGAGGVRAYAGILPDSLTTHWLEQQVTTWTDQTRRLEVAVRMYRMRFHDAELPDTVTLEQLRGMEGQRMKTLYKILAQQHGIGRFRRNYHPDQWHAQDPVNLALSSANTCLYGIVHAALLALGLSPALGFVHAGKQHAFVYDIADLNKAETTLPLAFALHQSGNPEQDARRRFRENLRLLKLLPRIVHDVQSLLTPGSPVTADQPTPASERRDTEMVHLWDPKRGVLPAGVNYGSGEQ
>NZ_CP042266.1|WP_006346019.1|7617544_7617862_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MPSMLVLATTAVPDHLRGALSRWTTEVVPGIFVGAVSTRVRDHLWQAVTDTVGDGAAILVHPAQTEQGYAIRTAGSRRRVPMDFDGLTLMRMTAAPTGEENRSPG
>NZ_CP042266.1|WP_146483753.1|7619272_7619581_+|hypothetical-protein
MRPEVLTFVAGGPLPDWDAEEEEINRRVTQLEAISKPVTGEEAAALVTCFGPDDCYGVAWTLLHLIETGPHPVLQTKPPMDANEWHHRLYDRAVFEQFTSTT
>NZ_CP042266.1|WP_146483754.1|7619668_7620064_+|hypothetical-protein
MNLIRCAKGAVTASAATAACYTLMYWGYAWAREAADTRTARGGTFGGAIEHLLTTAGSWILMPLLLWAGMRLLREGGNTVFVLAGGVAWVLVSGILIDDIDFPGSRTPYVALAVYVLFCTMLSGKDQPTKP

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP042266_8	8.1|2448112|18|NZ_CP042266|CRT	2448112-2448129	18	NZ_CP042266.1	1912257-1912274	1	0.944
NZ_CP042266_8	8.1|2448112|18|NZ_CP042266|CRT	2448112-2448129	18	NZ_CP042266.1	2994214-2994231	1	0.944
NZ_CP042266_8	8.1|2448112|18|NZ_CP042266|CRT	2448112-2448129	18	NZ_CP042266.1	1210901-1210918	1	0.944
NZ_CP042266_8	8.1|2448112|18|NZ_CP042266|CRT	2448112-2448129	18	NZ_CP042266.1	3923499-3923516	1	0.944
NZ_CP042266_8	8.1|2448112|18|NZ_CP042266|CRT	2448112-2448129	18	NZ_CP042266.1	4970160-4970177	1	0.944

1. spacer 8.1|2448112|18|NZ_CP042266|CRT matches to position: 1912257-1912274, mismatch: 1, identity: 0.944

ggtgccggacgcggtgcc	CRISPR spacer
ggtgccggacgcggcgcc	Protospacer
**************.***

2. spacer 8.1|2448112|18|NZ_CP042266|CRT matches to position: 2994214-2994231, mismatch: 1, identity: 0.944

ggtgccggacgcggtgcc	CRISPR spacer
ggtgccggacacggtgcc	Protospacer
**********.*******

3. spacer 8.1|2448112|18|NZ_CP042266|CRT matches to position: 1210901-1210918, mismatch: 1, identity: 0.944

ggtgccggacgcggtgcc	CRISPR spacer
ggtgccggacggggtgcc	Protospacer
*********** ******

4. spacer 8.1|2448112|18|NZ_CP042266|CRT matches to position: 3923499-3923516, mismatch: 1, identity: 0.944

ggtgccggacgcggtgcc	CRISPR spacer
ggtgccggtcgcggtgcc	Protospacer
******** *********

5. spacer 8.1|2448112|18|NZ_CP042266|CRT matches to position: 4970160-4970177, mismatch: 1, identity: 0.944

ggtgccggacgcggtgcc	CRISPR spacer
ggtgcgggacgcggtgcc	Protospacer
***** ************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042266_1	1.1|326002|34|NZ_CP042266|PILER-CR	326002-326035	34	KY676784	Streptomyces phage ToastyFinz, complete genome	374-407	4	0.882
NZ_CP042266_8	8.3|2448196|25|NZ_CP042266|CRT	2448196-2448220	25	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	516378-516402	4	0.84
NZ_CP042266_8	8.3|2448196|25|NZ_CP042266|CRT	2448196-2448220	25	NZ_LR134459	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence	224969-224993	4	0.84
NZ_CP042266_8	8.3|2448196|25|NZ_CP042266|CRT	2448196-2448220	25	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	11471-11495	4	0.84
NZ_CP042266_8	8.3|2448196|25|NZ_CP042266|CRT	2448196-2448220	25	MT522006	Gordonia phage BBQValindra, complete genome	45097-45121	4	0.84
NZ_CP042266_6	6.15|2386309|35|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	2386309-2386343	35	NC_005307	Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome	71073-71107	5	0.857
NZ_CP042266_8	8.3|2448196|25|NZ_CP042266|CRT	2448196-2448220	25	NZ_CP046569	Dietzia sp. DQ12-45-1b plasmid pII, complete sequence	4248-4272	5	0.8
NZ_CP042266_8	8.3|2448196|25|NZ_CP042266|CRT	2448196-2448220	25	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	1191453-1191477	5	0.8
NZ_CP042266_8	8.3|2448196|25|NZ_CP042266|CRT	2448196-2448220	25	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	484575-484599	5	0.8
NZ_CP042266_16	16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607251-7607282	32	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	526368-526399	5	0.844
NZ_CP042266_16	16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607611-7607642	32	NZ_CP025552	Streptomyces rimosus strain WT5260 plasmid unnamed, complete sequence	218826-218857	5	0.844
NZ_CP042266_16	16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607611-7607642	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1435769-1435800	5	0.844
NZ_CP042266_16	16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607611-7607642	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	377491-377522	5	0.844
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP013069	Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence	191366-191397	5	0.844
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	224683-224714	5	0.844
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1588434-1588465	5	0.844
NZ_CP042266_5	5.8|2376746|36|NZ_CP042266|CRT	2376746-2376781	36	NZ_CP021119	Streptomyces sp. CLI2509 strain CLI2905 plasmid unnamed1, complete sequence	99121-99156	6	0.833
NZ_CP042266_7	7.9|2395685|34|NZ_CP042266|CRISPRCasFinder	2395685-2395718	34	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1654162-1654195	6	0.824
NZ_CP042266_7	7.9|2395685|34|NZ_CP042266|CRISPRCasFinder	2395685-2395718	34	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	234921-234954	6	0.824
NZ_CP042266_7	7.9|2395685|34|NZ_CP042266|CRISPRCasFinder	2395685-2395718	34	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	805887-805920	6	0.824
NZ_CP042266_7	7.9|2395685|34|NZ_CP042266|CRISPRCasFinder	2395685-2395718	34	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1393240-1393273	6	0.824
NZ_CP042266_7	7.9|2395685|34|NZ_CP042266|CRISPRCasFinder	2395685-2395718	34	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	151085-151118	6	0.824
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	155272-155301	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1599758-1599787	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1615510-1615539	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1056339-1056368	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1479878-1479907	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	458328-458357	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	622162-622191	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	124069-124098	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	837815-837844	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	474758-474787	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	188679-188708	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1467051-1467080	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	700828-700857	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1708591-1708620	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	365044-365073	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	485960-485989	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	464231-464260	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	485960-485989	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	485467-485496	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	467930-467959	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	485960-485989	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	485467-485496	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	467930-467959	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	485960-485989	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	485467-485496	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	485471-485500	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	467930-467959	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	467930-467959	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	467930-467959	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	485960-485989	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	485960-485989	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	466441-466470	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	485960-485989	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	485467-485496	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	556219-556248	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	485959-485988	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	485960-485989	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	467932-467961	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	485960-485989	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	485960-485989	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP034811	Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence	80816-80845	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP016082	Streptomyces sp. SAT1 plasmid unnamed2, complete sequence	149136-149165	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP041164	Leisingera aquaemixtae strain R2C4 plasmid unnamed3, complete sequence	3708-3737	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1332639-1332668	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	116508-116537	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	934769-934798	6	0.8
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	591625-591654	6	0.8
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	148673-148705	6	0.818
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1664587-1664619	6	0.818
NZ_CP042266_16	16.3|7607191|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607191-7607222	32	NZ_CP044989	Deinococcus sp. AJ005 plasmid p380k, complete sequence	265200-265231	6	0.812
NZ_CP042266_16	16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607431-7607462	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	400079-400110	6	0.812
NZ_CP042266_16	16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607431-7607462	32	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	82620-82651	6	0.812
NZ_CP042266_16	16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607431-7607462	32	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	696505-696536	6	0.812
NZ_CP042266_16	16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607431-7607462	32	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	525563-525594	6	0.812
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	306340-306371	6	0.812
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP050953	Rhodococcus sp. DMU1 plasmid unnamed	565672-565703	6	0.812
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP047145	Streptomyces sp. HF10 plasmid plas1, complete sequence	35594-35625	6	0.812
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP034347	Roseovarius sp. MME-070 plasmid pMME07001, complete sequence	19487-19518	6	0.812
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_AP019802	Thermus thermophilus strain HC11 plasmid pHC11, complete sequence	241426-241457	6	0.812
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NC_019387	Thermus oshimai JL-2 plasmid pTHEOS01, complete sequence	136309-136340	6	0.812
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP023976	Streptomyces alboflavus strain MDJK44 plasmid pMDJK44.1, complete sequence	131982-132013	6	0.812
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_LR134450	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence	167251-167282	6	0.812
NZ_CP042266_1	1.3|325999|38|NZ_CP042266|CRISPRCasFinder	325999-326036	38	KY676784	Streptomyces phage ToastyFinz, complete genome	371-408	7	0.816
NZ_CP042266_2	2.2|811021|31|NZ_CP042266|CRISPRCasFinder	811021-811051	31	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	151010-151040	7	0.774
NZ_CP042266_2	2.2|811021|31|NZ_CP042266|CRISPRCasFinder	811021-811051	31	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	90037-90067	7	0.774
NZ_CP042266_2	2.2|811021|31|NZ_CP042266|CRISPRCasFinder	811021-811051	31	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	90037-90067	7	0.774
NZ_CP042266_2	2.4|811027|31|NZ_CP042266|PILER-CR	811027-811057	31	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	151010-151040	7	0.774
NZ_CP042266_2	2.4|811027|31|NZ_CP042266|PILER-CR	811027-811057	31	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	90037-90067	7	0.774
NZ_CP042266_2	2.4|811027|31|NZ_CP042266|PILER-CR	811027-811057	31	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	90037-90067	7	0.774
NZ_CP042266_5	5.5|2376548|36|NZ_CP042266|CRT	2376548-2376583	36	NZ_CP049837	Gordonia terrae strain RL-JC02 plasmid pPAE01, complete sequence	65928-65963	7	0.806
NZ_CP042266_5	5.18|2376746|37|NZ_CP042266|PILER-CR,CRISPRCasFinder	2376746-2376782	37	NZ_CP021119	Streptomyces sp. CLI2509 strain CLI2905 plasmid unnamed1, complete sequence	99120-99156	7	0.811
NZ_CP042266_6	6.9|2385915|37|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	2385915-2385951	37	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1853226-1853262	7	0.811
NZ_CP042266_6	6.15|2386309|35|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	2386309-2386343	35	NC_012523	Rhodococcus opacus B4 plasmid pKNR, complete sequence	51949-51983	7	0.8
NZ_CP042266_7	7.10|2395749|33|NZ_CP042266|CRISPRCasFinder	2395749-2395781	33	NZ_CP025547	Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence	145037-145069	7	0.788
NZ_CP042266_7	7.10|2395749|33|NZ_CP042266|CRISPRCasFinder	2395749-2395781	33	NZ_CP003988	Streptomyces sp. 769 plasmid pSGZL, complete sequence	153795-153827	7	0.788
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	207203-207232	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	130556-130585	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1255922-1255951	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	557614-557643	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP051182	Thalassobius gelatinovorus strain NEB572 plasmid pAge77, complete sequence	5530-5559	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_KY349138	Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence	47132-47161	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	430436-430465	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP032676	Rhodococcus rhodochrous strain ATCC BAA870 plasmid pNit, complete sequence	346681-346710	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	414680-414709	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	414670-414699	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	502293-502322	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP046575	Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence	334933-334962	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	263919-263948	7	0.767
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NC_019898	Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence	77188-77217	7	0.767
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP030273	Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence	51591-51623	7	0.788
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	CP047033	Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence	45265-45297	7	0.788
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NC_009040	Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, complete sequence	5913-5945	7	0.788
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP047039	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence	45249-45281	7	0.788
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP015213	Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence	89061-89093	7	0.788
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP051470	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence	35105-35137	7	0.788
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NC_011960	Rhodobacter sphaeroides KD131 plasmid pRSKD131B, complete sequence	88206-88238	7	0.788
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP015290	Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence	19476-19508	7	0.788
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	CP036421	Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence	44044-44076	7	0.788
NZ_CP042266_16	16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607251-7607282	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	678079-678110	7	0.781
NZ_CP042266_16	16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607251-7607282	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	1181995-1182026	7	0.781
NZ_CP042266_16	16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607371-7607402	32	NC_012807	Methylorubrum extorquens AM1 plasmid p1META1, complete sequence	35858-35889	7	0.781
NZ_CP042266_16	16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607431-7607462	32	NZ_CP035092	Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence	66707-66738	7	0.781
NZ_CP042266_16	16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607431-7607462	32	NC_008688	Paracoccus denitrificans PD1222 plasmid 1, complete sequence	314054-314085	7	0.781
NZ_CP042266_16	16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607611-7607642	32	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	513056-513087	7	0.781
NZ_CP042266_16	16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607611-7607642	32	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	534345-534376	7	0.781
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_AP019795	Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence	121801-121832	7	0.781
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_AP019793	Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence	151215-151246	7	0.781
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NC_017273	Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence	259681-259712	7	0.781
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NC_017588	Thermus thermophilus JL-18 plasmid pTTJL1801, complete sequence	226897-226928	7	0.781
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP034811	Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence	197815-197846	7	0.781
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	65120-65151	7	0.781
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	MT936332	Streptomyces phage phiRKBJ001, complete genome	48036-48067	7	0.781
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NC_009806	Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence	105493-105524	7	0.781
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	MT658803	Mycobacterium phage Reindeer, complete genome	43231-43262	7	0.781
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP010826	Thermus aquaticus Y51MC23 plasmid pTA78, complete sequence	56622-56653	7	0.781
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP006370	Aureimonas sp. AU20 plasmid pAU20c, complete sequence	20902-20933	7	0.781
NZ_CP042266_16	16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607911-7607942	32	NZ_CP011665	Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence	384197-384228	7	0.781
NZ_CP042266_16	16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607911-7607942	32	NZ_CP033582	Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence	249891-249922	7	0.781
NZ_CP042266_5	5.10|2376877|34|NZ_CP042266|CRT	2376877-2376910	34	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	178894-178927	8	0.765
NZ_CP042266_5	5.15|2376548|37|NZ_CP042266|PILER-CR,CRISPRCasFinder	2376548-2376584	37	NZ_CP049837	Gordonia terrae strain RL-JC02 plasmid pPAE01, complete sequence	65928-65964	8	0.784
NZ_CP042266_7	7.4|2395684|35|NZ_CP042266|PILER-CR	2395684-2395718	35	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1160544-1160578	8	0.771
NZ_CP042266_7	7.5|2395748|34|NZ_CP042266|PILER-CR	2395748-2395781	34	NZ_CP003988	Streptomyces sp. 769 plasmid pSGZL, complete sequence	153794-153827	8	0.765
NZ_CP042266_7	7.9|2395685|34|NZ_CP042266|CRISPRCasFinder	2395685-2395718	34	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1160544-1160577	8	0.765
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	446975-447004	8	0.733
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	440909-440938	8	0.733
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP023977	Streptomyces alboflavus strain MDJK44 plasmid pMDJK44.2, complete sequence	49690-49719	8	0.733
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	253493-253522	8	0.733
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	NC_004808	Streptomyces rochei plasmid pSLA2-L DNA, complete sequence	85571-85600	8	0.733
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	740064-740096	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	358999-359031	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	739613-739645	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	360713-360745	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	426536-426568	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP022999	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence	234788-234820	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	1610918-1610950	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	41898-41930	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	1260067-1260099	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	1312805-1312837	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	568722-568754	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	356263-356295	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	358999-359031	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	1387556-1387588	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	1348322-1348354	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	939182-939214	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP022191	Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence	431122-431154	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	1310301-1310333	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	1367779-1367811	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1979479-1979511	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	44710-44742	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	1555664-1555696	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	1275900-1275932	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	491676-491708	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	1544324-1544356	8	0.758
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	1376186-1376218	8	0.758
NZ_CP042266_16	16.1|7607071|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607071-7607102	32	NZ_CP054622	Azospirillum oryzae strain KACC 14407 plasmid unnamed7, complete sequence	73638-73669	8	0.75
NZ_CP042266_16	16.1|7607071|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607071-7607102	32	NZ_CP039651	Azospirillum sp. TSA2s plasmid p1	52715-52746	8	0.75
NZ_CP042266_16	16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607251-7607282	32	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	299556-299587	8	0.75
NZ_CP042266_16	16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607431-7607462	32	NZ_CP028970	Aminobacter sp. MSH1 plasmid pUSP2, complete sequence	21049-21080	8	0.75
NZ_CP042266_16	16.9|7607551|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607551-7607582	32	NC_014214	Meiothermus silvanus DSM 9946 plasmid pMESIL02, complete sequence	102464-102495	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	435377-435408	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	206818-206849	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP018096	Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence	207235-207266	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP016313	Thermus brockianus strain GE-1 plasmid pTB1, complete sequence	71154-71185	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	479807-479838	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1333262-1333293	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	204147-204178	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	58121-58152	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	334476-334507	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP012383	Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence	9633-9664	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_LR134454	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence	115493-115524	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_LR134461	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 19, complete sequence	21637-21668	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP045122	Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence	263043-263074	8	0.75
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	KR053194	Gordonia phage GAL1, complete genome	36844-36875	8	0.75
NZ_CP042266_16	16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607911-7607942	32	NZ_CP032703	Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence	461817-461848	8	0.75
NZ_CP042266_16	16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607911-7607942	32	MG065677	UNVERIFIED: Campylobacter phage A13b, complete genome	41940-41971	8	0.75
NZ_CP042266_16	16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607911-7607942	32	MG065644	UNVERIFIED: Campylobacter phage A147, complete genome	32835-32866	8	0.75
NZ_CP042266_16	16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607911-7607942	32	MG022439	Phage 203, complete genome	9826-9857	8	0.75
NZ_CP042266_16	16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607911-7607942	32	MH752840	Escherichia phage vB_EcoM-Pr121LW, complete genome	94180-94211	8	0.75
NZ_CP042266_16	16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607911-7607942	32	MG065674	UNVERIFIED: Campylobacter phage A140, complete genome	4295-4326	8	0.75
NZ_CP042266_16	16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607911-7607942	32	MG065662	UNVERIFIED: Campylobacter phage A142, complete genome	45411-45442	8	0.75
NZ_CP042266_16	16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607911-7607942	32	MG065672	UNVERIFIED: Campylobacter phage A141, complete genome	56578-56609	8	0.75
NZ_CP042266_16	16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607911-7607942	32	MG065690	UNVERIFIED: Campylobacter phage A135, complete genome	47341-47372	8	0.75
NZ_CP042266_16	16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607911-7607942	32	MG022440	Phage 206, complete genome	9826-9857	8	0.75
NZ_CP042266_2	2.2|811021|31|NZ_CP042266|CRISPRCasFinder	811021-811051	31	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	387226-387256	9	0.71
NZ_CP042266_2	2.4|811027|31|NZ_CP042266|PILER-CR	811027-811057	31	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	387226-387256	9	0.71
NZ_CP042266_6	6.1|2385389|37|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	2385389-2385425	37	NC_013698	Clavibacter phage CMP1, complete genome	28575-28611	9	0.757
NZ_CP042266_6	6.2|2385455|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	2385455-2385490	36	NZ_CP046903	Pseudomonas stutzeri strain PM101005 plasmid p1_PM101005, complete sequence	263538-263573	9	0.75
NZ_CP042266_6	6.22|2386767|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	2386767-2386802	36	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	428120-428155	9	0.75
NZ_CP042266_7	7.4|2395684|35|NZ_CP042266|PILER-CR	2395684-2395718	35	NZ_CP035710	Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence	139017-139051	9	0.743
NZ_CP042266_7	7.6|2395478|36|NZ_CP042266|CRISPRCasFinder	2395478-2395513	36	NZ_CP015092	Pelagibaca abyssi strain JLT2014 plasmid pPABY3, complete sequence	70054-70089	9	0.75
NZ_CP042266_7	7.6|2395478|36|NZ_CP042266|CRISPRCasFinder	2395478-2395513	36	NZ_CP049815	Monaibacterium sp. ALG8 plasmid unnamed4, complete sequence	105248-105283	9	0.75
NZ_CP042266_7	7.6|2395478|36|NZ_CP042266|CRISPRCasFinder	2395478-2395513	36	NZ_CP010861	Marinovum algicola DG 898 plasmid pMaD6, complete sequence	89138-89173	9	0.75
NZ_CP042266_7	7.9|2395685|34|NZ_CP042266|CRISPRCasFinder	2395685-2395718	34	NZ_CP035710	Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence	139017-139050	9	0.735
NZ_CP042266_7	7.9|2395685|34|NZ_CP042266|CRISPRCasFinder	2395685-2395718	34	NZ_CP013855	Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence	109203-109236	9	0.735
NZ_CP042266_7	7.9|2395685|34|NZ_CP042266|CRISPRCasFinder	2395685-2395718	34	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	9822-9855	9	0.735
NZ_CP042266_7	7.14|2395684|36|NZ_CP042266|CRT	2395684-2395719	36	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1160543-1160578	9	0.75
NZ_CP042266_8	8.2|2448148|30|NZ_CP042266|CRT	2448148-2448177	30	MN908689	Arthrobacter phage DrSierra, complete genome	16927-16956	9	0.7
NZ_CP042266_9	9.2|2633470|33|NZ_CP042266|CRISPRCasFinder	2633470-2633502	33	NZ_CP025613	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence	372620-372652	9	0.727
NZ_CP042266_14	14.2|5362949|33|NZ_CP042266|CRISPRCasFinder	5362949-5362981	33	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	175582-175614	9	0.727
NZ_CP042266_16	16.3|7607191|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607191-7607222	32	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	9468-9499	9	0.719
NZ_CP042266_16	16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607251-7607282	32	NZ_CP023993	Streptomyces malaysiensis strain DSM 4137 plasmid unnamed, complete sequence	45973-46004	9	0.719
NZ_CP042266_16	16.5|7607311|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607311-7607342	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3058865-3058896	9	0.719
NZ_CP042266_16	16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607371-7607402	32	NZ_CP047174	Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence	98102-98133	9	0.719
NZ_CP042266_16	16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607371-7607402	32	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	174468-174499	9	0.719
NZ_CP042266_16	16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607371-7607402	32	NZ_CP053206	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence	31021-31052	9	0.719
NZ_CP042266_16	16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607431-7607462	32	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	399409-399440	9	0.719
NZ_CP042266_16	16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607431-7607462	32	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	398618-398649	9	0.719
NZ_CP042266_16	16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607431-7607462	32	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	655119-655150	9	0.719
NZ_CP042266_16	16.8|7607491|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607491-7607522	32	NZ_CP053911	Hymenobacter sp. BRD128 plasmid unnamed3, complete sequence	30121-30152	9	0.719
NZ_CP042266_16	16.9|7607551|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607551-7607582	32	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	73893-73924	9	0.719
NZ_CP042266_16	16.9|7607551|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607551-7607582	32	NZ_CP025540	Vibrio harveyi strain 345 plasmid p345-67, complete sequence	61199-61230	9	0.719
NZ_CP042266_16	16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607611-7607642	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	137106-137137	9	0.719
NZ_CP042266_16	16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607611-7607642	32	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	588753-588784	9	0.719
NZ_CP042266_16	16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607611-7607642	32	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	57390-57421	9	0.719
NZ_CP042266_16	16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607611-7607642	32	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	282526-282557	9	0.719
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_LR594692	Variovorax sp. WDL1 plasmid 4	191106-191137	9	0.719
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	818359-818390	9	0.719
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	MK937599	Gordonia phage Dmitri, complete genome	21329-21360	9	0.719
NZ_CP042266_16	16.13|7607791|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607791-7607822	32	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	358905-358936	9	0.719
NZ_CP042266_5	5.2|2376353|35|NZ_CP042266|CRT	2376353-2376387	35	NZ_CP035420	Leisingera sp. NJS204 plasmid unnamed3, complete sequence	18195-18229	10	0.714
NZ_CP042266_5	5.4|2376484|34|NZ_CP042266|CRT	2376484-2376517	34	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	620512-620545	10	0.706
NZ_CP042266_5	5.4|2376484|34|NZ_CP042266|CRT	2376484-2376517	34	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	300856-300889	10	0.706
NZ_CP042266_5	5.4|2376484|34|NZ_CP042266|CRT	2376484-2376517	34	CP054924	Verrucosispora sp. NA02020 plasmid unnamed, complete sequence	52376-52409	10	0.706
NZ_CP042266_5	5.4|2376484|34|NZ_CP042266|CRT	2376484-2376517	34	NZ_CP013069	Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence	44553-44586	10	0.706
NZ_CP042266_5	5.8|2376746|36|NZ_CP042266|CRT	2376746-2376781	36	NC_004933	Streptomyces lividans 1326 plasmid SLP2, complete sequence	15077-15112	10	0.722
NZ_CP042266_5	5.14|2376484|35|NZ_CP042266|PILER-CR,CRISPRCasFinder	2376484-2376518	35	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	300855-300889	10	0.714
NZ_CP042266_6	6.15|2386309|35|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	2386309-2386343	35	NZ_AP018516	Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence	111065-111099	10	0.714
NZ_CP042266_7	7.1|2395477|37|NZ_CP042266|PILER-CR	2395477-2395513	37	NZ_CP015092	Pelagibaca abyssi strain JLT2014 plasmid pPABY3, complete sequence	70053-70089	10	0.73
NZ_CP042266_7	7.1|2395477|37|NZ_CP042266|PILER-CR	2395477-2395513	37	NZ_CP049815	Monaibacterium sp. ALG8 plasmid unnamed4, complete sequence	105247-105283	10	0.73
NZ_CP042266_7	7.1|2395477|37|NZ_CP042266|PILER-CR	2395477-2395513	37	NZ_CP010861	Marinovum algicola DG 898 plasmid pMaD6, complete sequence	89137-89173	10	0.73
NZ_CP042266_16	16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607251-7607282	32	KU935731	Mycobacterium phage Phrann, complete genome	11699-11730	10	0.688
NZ_CP042266_16	16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607251-7607282	32	KX756439	Mycobacterium phage PhancyPhin, complete genome	11699-11730	10	0.688
NZ_CP042266_16	16.5|7607311|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607311-7607342	32	NZ_CP010326	Pantoea sp. PSNIH1 plasmid pPSP-3a9, complete sequence	147756-147787	10	0.688
NZ_CP042266_16	16.5|7607311|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607311-7607342	32	NZ_AP017899	Sphingopyxis sp. FD7 plasmid pSFD01, complete sequence	80910-80941	10	0.688
NZ_CP042266_16	16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607371-7607402	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1209747-1209778	10	0.688
NZ_CP042266_16	16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607371-7607402	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	603786-603817	10	0.688
NZ_CP042266_16	16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607431-7607462	32	MK433266	Streptomyces phage Shawty, complete genome	28496-28527	10	0.688
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1266403-1266434	10	0.688
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	183098-183129	10	0.688
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	525389-525420	10	0.688
NZ_CP042266_16	16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607671-7607702	32	KU998235	Gordonia phage Bowser, complete genome	20126-20157	10	0.688
NZ_CP042266_5	5.14|2376484|35|NZ_CP042266|PILER-CR,CRISPRCasFinder	2376484-2376518	35	CP054924	Verrucosispora sp. NA02020 plasmid unnamed, complete sequence	52376-52410	11	0.686
NZ_CP042266_5	5.18|2376746|37|NZ_CP042266|PILER-CR,CRISPRCasFinder	2376746-2376782	37	NC_004933	Streptomyces lividans 1326 plasmid SLP2, complete sequence	15076-15112	11	0.703
NZ_CP042266_7	7.11|2395477|38|NZ_CP042266|CRT	2395477-2395514	38	NZ_CP015092	Pelagibaca abyssi strain JLT2014 plasmid pPABY3, complete sequence	70053-70090	11	0.711
NZ_CP042266_7	7.11|2395477|38|NZ_CP042266|CRT	2395477-2395514	38	NZ_CP049815	Monaibacterium sp. ALG8 plasmid unnamed4, complete sequence	105247-105284	11	0.711
NZ_CP042266_7	7.11|2395477|38|NZ_CP042266|CRT	2395477-2395514	38	NZ_CP010861	Marinovum algicola DG 898 plasmid pMaD6, complete sequence	89137-89174	11	0.711
NZ_CP042266_16	16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT	7607431-7607462	32	NZ_LR723672	Rhizobium flavum strain YW14 plasmid 3	129321-129352	11	0.656

1. spacer 1.1|326002|34|NZ_CP042266|PILER-CR matches to KY676784 (Streptomyces phage ToastyFinz, complete genome) position: , mismatch: 4, identity: 0.882

gctacgtcgacgaggcgacgctacttcccgaagc	CRISPR spacer
cctacgtcgacgaggcgacgctactccccgaggg	Protospacer
 ************************.*****.* 

2. spacer 8.3|2448196|25|NZ_CP042266|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 4, identity: 0.84

tcccggggtgggcgcggtcgccggt	CRISPR spacer
ggccggggtgtgcgcggacgccggt	Protospacer
  ******** ****** *******

3. spacer 8.3|2448196|25|NZ_CP042266|CRT matches to NZ_LR134459 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence) position: , mismatch: 4, identity: 0.84

tcccggggtgggcgcggtcgccggt	CRISPR spacer
gcccggcgtggtcgcggtcgccggg	Protospacer
 ***** **** ************ 

4. spacer 8.3|2448196|25|NZ_CP042266|CRT matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 4, identity: 0.84

tcccggggtgggcgcggtcgccggt	CRISPR spacer
ccccggggtgggcgcggccgcccct	Protospacer
.****************.****  *

5. spacer 8.3|2448196|25|NZ_CP042266|CRT matches to MT522006 (Gordonia phage BBQValindra, complete genome) position: , mismatch: 4, identity: 0.84

tcccggggtgggcgcggtcgccggt	CRISPR spacer
cgccggggtgggtgcgttcgccggt	Protospacer
. **********.*** ********

6. spacer 6.15|2386309|35|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_005307 (Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome) position: , mismatch: 5, identity: 0.857

--gctgaccttctggtggccctgctggatgatccggc	CRISPR spacer
ccgcgga--ttctggttgccctgccggatgatccggc	Protospacer
  ** **  ******* *******.************

7. spacer 8.3|2448196|25|NZ_CP042266|CRT matches to NZ_CP046569 (Dietzia sp. DQ12-45-1b plasmid pII, complete sequence) position: , mismatch: 5, identity: 0.8

tcccggggtgggcgcggtcgccggt	CRISPR spacer
agtcggggtgggcgcggtcgtcggg	Protospacer
  .*****************.*** 

8. spacer 8.3|2448196|25|NZ_CP042266|CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 5, identity: 0.8

tcccggggtgggcgcggtcgccggt	CRISPR spacer
cgccggggcgggcgcggtcgccgac	Protospacer
. ******.**************..

9. spacer 8.3|2448196|25|NZ_CP042266|CRT matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 5, identity: 0.8

tcccggggtgggcgcggtcgccggt	CRISPR spacer
agacggggtgggcgcgggcgccggc	Protospacer
   ************** ******.

10. spacer 16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 5, identity: 0.844

agccg--gggcatagcgcggaacgcggccgtcag	CRISPR spacer
--ccgttgggccaagcgcggaacgcggccgtccg	Protospacer
  ***  ****  ******************* *

11. spacer 16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025552 (Streptomyces rimosus strain WT5260 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

cggtcct--tcaccggcgagtccgtcggcgtcca	CRISPR spacer
--gtactgggcaccggcgagcccgtcggcgtcca	Protospacer
  ** **   **********.*************

12. spacer 16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 5, identity: 0.844

cggtc--cttcaccggcgagtccgtcggcgtcca	CRISPR spacer
--gtcgtcctcaccggcgagttcgtcggcggcca	Protospacer
  ***  *.************.******** ***

13. spacer 16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 5, identity: 0.844

cggtc--cttcaccggcgagtccgtcggcgtcca	CRISPR spacer
--gtcgtcctcaccggcgagttcgtcggcggcca	Protospacer
  ***  *.************.******** ***

14. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013069 (Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence) position: , mismatch: 5, identity: 0.844

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ggggccgccgaggagggcggcgaggaggccgg	Protospacer
*. * **************. ***********

15. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 5, identity: 0.844

gacggcgccgaggagggcgaggaggag--gccgg	CRISPR spacer
ggcggcgccgaggaggccgacgaggagttgcc--	Protospacer
*.************** *** ******  ***  

16. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 5, identity: 0.844

gacggcgccgaggagggcgaggaggag--gccgg	CRISPR spacer
ggcggcgccgaggaggccgacgaggagttgcc--	Protospacer
*.************** *** ******  ***  

17. spacer 5.8|2376746|36|NZ_CP042266|CRT matches to NZ_CP021119 (Streptomyces sp. CLI2509 strain CLI2905 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.833

-gtcgtgggtccggtctggccggctcccctcaccgcc	CRISPR spacer
tttcgt-ggtccgggctgtccggctcccctcaccccg	Protospacer
  **** ******* *** *************** * 

18. spacer 7.9|2395685|34|NZ_CP042266|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.824

atcgcccgg-acgatcagcgcccgcgcatccgccc	CRISPR spacer
-tcgatcagcgcgatcagcgcccgcgcctccgccc	Protospacer
 *** .*.* .**************** *******

19. spacer 7.9|2395685|34|NZ_CP042266|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.824

atcgcccgg-acgatcagcgcccgcgcatccgccc	CRISPR spacer
-tcgatcagcgcgatcagcgcccgcgcctccgccc	Protospacer
 *** .*.* .**************** *******

20. spacer 7.9|2395685|34|NZ_CP042266|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 6, identity: 0.824

atcgcccgg-acgatcagcgcccgcgcatccgccc	CRISPR spacer
-tcgacgagcgcgatcagcgcccgcgcctccgccc	Protospacer
 *** * .* .**************** *******

21. spacer 7.9|2395685|34|NZ_CP042266|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 6, identity: 0.824

atcgcccgg-acgatcagcgcccgcgcatccgccc	CRISPR spacer
-tcgatcagcgcgatcagcgcccgcgcctccgccc	Protospacer
 *** .*.* .**************** *******

22. spacer 7.9|2395685|34|NZ_CP042266|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 6, identity: 0.824

atcgcccgg-acgatcagcgcccgcgcatccgccc	CRISPR spacer
-tcgatcagcgcgatcagcgcccgcgcctccgccc	Protospacer
 *** .*.* .**************** *******

23. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

24. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

25. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

26. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

27. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

28. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

29. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

30. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

31. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

32. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

33. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

34. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

35. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

36. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

37. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

38. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

39. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

40. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

41. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

42. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

43. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

44. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

45. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

46. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

47. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

48. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

49. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

50. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

51. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

52. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

53. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

54. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

55. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

56. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

57. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

58. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

59. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

60. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

61. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

62. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggatgcggtgcctggggcggtggg	Protospacer
 ..******.******** ********* *

63. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP034811 (Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tgtcggggacgcgcggccgggggcggtgcc	Protospacer
 **  ********  ************** 

64. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP016082 (Streptomyces sp. SAT1 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg-	CRISPR spacer
ggtacgggacgcggtgccgggcg-agcacgg	Protospacer
***.***************** * .*..** 

65. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP041164 (Leisingera aquaemixtae strain R2C4 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
ggggacagaagcggtgccgggcgcggtgcg	Protospacer
** *  .** *********** ********

66. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgg----gacgcggtgccgggggcggtgcg	CRISPR spacer
----cggagccgacgcggtgacgggggcgctgcg	Protospacer
    ***    ********* ******** ****

67. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgg----gacgcggtgccgggggcggtgcg	CRISPR spacer
----cggagccgacgcggtgacgggggcgctgcg	Protospacer
    ***    ********* ******** ****

68. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgg----gacgcggtgccgggggcggtgcg	CRISPR spacer
----cggagccgacgcggtgacgggggcgctgcg	Protospacer
    ***    ********* ******** ****

69. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 6, identity: 0.8

ggtgcgg----gacgcggtgccgggggcggtgcg	CRISPR spacer
----cggagccgacgcggtgacgggggcgctgcg	Protospacer
    ***    ********* ******** ****

70. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 6, identity: 0.818

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
cctggccgacctcatcggcgccgacctgcgcaa	Protospacer
 * ******.*********** ******** .*

71. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 6, identity: 0.818

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
cctggccgacctcatcggcgccgacctgcgcaa	Protospacer
 * ******.*********** ******** .*

72. spacer 16.3|7607191|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044989 (Deinococcus sp. AJ005 plasmid p380k, complete sequence) position: , mismatch: 6, identity: 0.812

gcgatgctggaaggcacggcctgggcgctcac	CRISPR spacer
gcactgctggaaggcacggtctgcgcgctgtc	Protospacer
**. ***************.*** *****  *

73. spacer 16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.812

gggttcggcctgccggtcatcgctgcctacta	CRISPR spacer
cgcatcggcatgccggtcatcgccgcctacga	Protospacer
 *  ***** *************.****** *

74. spacer 16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 6, identity: 0.812

gggttcggcctgccggtcatcgctgcctacta	CRISPR spacer
cgcatcggcatgccggtcatcgccgcctacga	Protospacer
 *  ***** *************.****** *

75. spacer 16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 6, identity: 0.812

gggttcggcctgccggtcatcgctgcctacta	CRISPR spacer
cgcatcggcatgccggtcatcgccgcctacga	Protospacer
 *  ***** *************.****** *

76. spacer 16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.812

gggttcggcctgccggtcatcgctgcctacta	CRISPR spacer
cgcatcggcatgccggtcatcgccgcctacga	Protospacer
 *  ***** *************.****** *

77. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 6, identity: 0.812

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
gccgacgccgaggaaggcgaggaggaggcgcc	Protospacer
* **.*********.**************   

78. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050953 (Rhodococcus sp. DMU1 plasmid unnamed) position: , mismatch: 6, identity: 0.812

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
gccggcgccgaggacggggaggaggaggtagc	Protospacer
* ************ ** **********. * 

79. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047145 (Streptomyces sp. HF10 plasmid plas1, complete sequence) position: , mismatch: 6, identity: 0.812

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
gccgccgccgaggagggcgacgaggaggagtg	Protospacer
* ** *************** *******   *

80. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034347 (Roseovarius sp. MME-070 plasmid pMME07001, complete sequence) position: , mismatch: 6, identity: 0.812

gacggcgccgaggagggcgaggaggaggccgg---	CRISPR spacer
ggcggcggcgaggagggc---gaggaggccgaacc	Protospacer
*.***** **********   **********.   

81. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019802 (Thermus thermophilus strain HC11 plasmid pHC11, complete sequence) position: , mismatch: 6, identity: 0.812

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ggccacgccgaggagggcgaggagggggtggg	Protospacer
*.* .********************.**. **

82. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_019387 (Thermus oshimai JL-2 plasmid pTHEOS01, complete sequence) position: , mismatch: 6, identity: 0.812

gacggcgcc--gaggagggcgaggaggaggccgg	CRISPR spacer
--cttctccaggaggagggcgaggaggaggcggg	Protospacer
  *  * **  ******************** **

83. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023976 (Streptomyces alboflavus strain MDJK44 plasmid pMDJK44.1, complete sequence) position: , mismatch: 6, identity: 0.812

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
gaggctgccggggagggcgaggaggaagccgc	Protospacer
** * .****.***************.**** 

84. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134450 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 8, complete sequence) position: , mismatch: 6, identity: 0.812

gacggcgccgaggagggcgaggag---gaggccgg	CRISPR spacer
gacggcggcgaggagggccaggagctcgagcc---	Protospacer
******* ********** *****   *** *   

85. spacer 1.3|325999|38|NZ_CP042266|CRISPRCasFinder matches to KY676784 (Streptomyces phage ToastyFinz, complete genome) position: , mismatch: 7, identity: 0.816

agcgctacgtcgacgaggcgacgctacttcccgaagcg	CRISPR spacer
tcgcctacgtcgacgaggcgacgctactccccgagggg	Protospacer
    ************************.*****.* *

86. spacer 2.2|811021|31|NZ_CP042266|CRISPRCasFinder matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 7, identity: 0.774

gggcgggcccgggctcgcgggggtcccgttc	CRISPR spacer
cgtcgccgccgagctcgcggggatcccgttc	Protospacer
 * **   ***.**********.********

87. spacer 2.2|811021|31|NZ_CP042266|CRISPRCasFinder matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 7, identity: 0.774

gggcgggcccgggctcgcgggggtcccgttc	CRISPR spacer
cgtcgccgccgagctcgcggggatcccgttc	Protospacer
 * **   ***.**********.********

88. spacer 2.2|811021|31|NZ_CP042266|CRISPRCasFinder matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 7, identity: 0.774

gggcgggcccgggctcgcgggggtcccgttc	CRISPR spacer
cgtcgccgccgagctcgcggggatcccgttc	Protospacer
 * **   ***.**********.********

89. spacer 2.4|811027|31|NZ_CP042266|PILER-CR matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 7, identity: 0.774

gggcgggcccgggctcgcgggggtcccgttc	CRISPR spacer
cgtcgccgccgagctcgcggggatcccgttc	Protospacer
 * **   ***.**********.********

90. spacer 2.4|811027|31|NZ_CP042266|PILER-CR matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 7, identity: 0.774

gggcgggcccgggctcgcgggggtcccgttc	CRISPR spacer
cgtcgccgccgagctcgcggggatcccgttc	Protospacer
 * **   ***.**********.********

91. spacer 2.4|811027|31|NZ_CP042266|PILER-CR matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 7, identity: 0.774

gggcgggcccgggctcgcgggggtcccgttc	CRISPR spacer
cgtcgccgccgagctcgcggggatcccgttc	Protospacer
 * **   ***.**********.********

92. spacer 5.5|2376548|36|NZ_CP042266|CRT matches to NZ_CP049837 (Gordonia terrae strain RL-JC02 plasmid pPAE01, complete sequence) position: , mismatch: 7, identity: 0.806

gtgacgatcgcgacgtgcccgggccagaagaccaag	CRISPR spacer
cgggcgatcgcgacgtgcccgggccagaggatgagg	Protospacer
  *.************************.**. *.*

93. spacer 5.18|2376746|37|NZ_CP042266|PILER-CR,CRISPRCasFinder matches to NZ_CP021119 (Streptomyces sp. CLI2509 strain CLI2905 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.811

-gtcgtgggtccggtctggccggctcccctcaccgccg	CRISPR spacer
tttcgt-ggtccgggctgtccggctcccctcaccccgc	Protospacer
  **** ******* *** *************** *  

94. spacer 6.9|2385915|37|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.811

tgcca-ctcgggctcctcgccgtcctcgaacggttcga	CRISPR spacer
-gccagttcggcctcctcgccgtcctcgaacggcgtgg	Protospacer
 **** .**** *********************. .*.

95. spacer 6.15|2386309|35|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_012523 (Rhodococcus opacus B4 plasmid pKNR, complete sequence) position: , mismatch: 7, identity: 0.8

gctgaccttctggtggccctgctggatgatccggc	CRISPR spacer
ggtcttgttctggttgccctgccggatgatccggc	Protospacer
* *  . ******* *******.************

96. spacer 7.10|2395749|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP025547 (Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

aggtattcgtcggcggcttgccgcatgtcctcg	CRISPR spacer
aagtggtcgtcggcagcttgccgcatggccgca	Protospacer
*.**. ********.************ ** *.

97. spacer 7.10|2395749|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP003988 (Streptomyces sp. 769 plasmid pSGZL, complete sequence) position: , mismatch: 7, identity: 0.788

aggtattcgtcggcggcttgccgcatgtcctcg	CRISPR spacer
atgtcggcttcggcggcttgccgaatgtgctcg	Protospacer
* **   * ************** **** ****

98. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
gcactgggacgcggtgccgggggcggcggt	Protospacer
*   .*********************.*  

99. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
gcactgggacgcggtgccgggggcggcggt	Protospacer
*   .*********************.*  

100. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
ggtgccggacggggtgccgggggagatctt	Protospacer
***** ***** *********** *.* . 

101. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
ggtgccggacggggtgccgggggagatctt	Protospacer
***** ***** *********** *.* . 

102. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP051182 (Thalassobius gelatinovorus strain NEB572 plasmid pAge77, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
ggtgcgggccgcggtgccgcgggccgaagc	Protospacer
******** ********** **** * .  

103. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_KY349138 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_2, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
agtgcgggtggcggtgccgggggcagcccc	Protospacer
.*******  **************.*. * 

104. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggaagcggtgcctggggcggcggg	Protospacer
 ..****** ******** *******.* *

105. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP032676 (Rhodococcus rhodochrous strain ATCC BAA870 plasmid pNit, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
gaggatcgacgcggtgcccggggcggtgag	Protospacer
*. *   *********** ********* *

106. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggaagcggtgcctggggcggcggg	Protospacer
 ..****** ******** *******.* *

107. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
tacgcgggaagcggtgcctggggcggcggg	Protospacer
 ..****** ******** *******.* *

108. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
gaggatcgacgcggtgcccggggcggtgag	Protospacer
*. *   *********** ********* *

109. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP046575 (Rhodococcus sp. WAY2 plasmid pRWAY03, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
gaggatcgacgcggtgcccggggcggtgag	Protospacer
*. *   *********** ********* *

110. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
cgggtcgcccgcggtgccggaggcggtgcg	Protospacer
 * *. *  ***********.*********

111. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NC_019898 (Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence) position: , mismatch: 7, identity: 0.767

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
gacgtgggatgcggtgccgggggcggacgg	Protospacer
*..*.****.****************   *

112. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP030273 (Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence) position: , mismatch: 7, identity: 0.788

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
gcaggtcgatctcgtcggcgcggatgcgccggg	Protospacer
*****.*******.**********. .** **.

113. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to CP047033 (Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence) position: , mismatch: 7, identity: 0.788

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
gcaggtcgatctcgtcggcgcggatgcgccggg	Protospacer
*****.*******.**********. .** **.

114. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NC_009040 (Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, complete sequence) position: , mismatch: 7, identity: 0.788

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
gcaggtcgatctcgtcggcgcggatgcgccggg	Protospacer
*****.*******.**********. .** **.

115. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP047039 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence) position: , mismatch: 7, identity: 0.788

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
gcaggtcgatctcgtcggcgcggatgcgccggg	Protospacer
*****.*******.**********. .** **.

116. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP015213 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence) position: , mismatch: 7, identity: 0.788

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
gcaggtcgatctcgtcggcgcggatgcgccggg	Protospacer
*****.*******.**********. .** **.

117. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP051470 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence) position: , mismatch: 7, identity: 0.788

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
gcaggtcgatctcgtcggcgcggatgcgccggg	Protospacer
*****.*******.**********. .** **.

118. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NC_011960 (Rhodobacter sphaeroides KD131 plasmid pRSKD131B, complete sequence) position: , mismatch: 7, identity: 0.788

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
gcaggtcgatctcgtcggcgcggatgcgccggg	Protospacer
*****.*******.**********. .** **.

119. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP015290 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence) position: , mismatch: 7, identity: 0.788

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
gcaggtcgatctcgtcggcgcggatgcgccggg	Protospacer
*****.*******.**********. .** **.

120. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to CP036421 (Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
gcaggtcgatctcgtcggcgcggatgcgccggg	Protospacer
*****.*******.**********. .** **.

121. spacer 16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

agccggggcatagcgcggaacgcggccgtcag	CRISPR spacer
gtcagttgaatcgcgcggaacgcggccgtcag	Protospacer
. * *  * ** ********************

122. spacer 16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

agccggggcatagcgcggaacgcggccgtcag	CRISPR spacer
gtcagttgaatcgcgcggaacgcggccgtcag	Protospacer
. * *  * ** ********************

123. spacer 16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_012807 (Methylorubrum extorquens AM1 plasmid p1META1, complete sequence) position: , mismatch: 7, identity: 0.781

gtctcttccgtccctgcgaccggcag-cccgca	CRISPR spacer
aggtctcccgcccctgcgaccggcagatccgc-	Protospacer
.  ***.***.*************** .**** 

124. spacer 16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035092 (Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gggttcggcctgccggtcatcgctgcc-tacta	CRISPR spacer
gtgatcggcctgctggtcatcgccgccgtgcc-	Protospacer
* * *********.*********.*** *.*. 

125. spacer 16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_008688 (Paracoccus denitrificans PD1222 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

gggttcggcctgccggtcatcgctgcc-tacta	CRISPR spacer
gtgatcggcctgctggtcatcgccgccgtgcc-	Protospacer
* * *********.*********.*** *.*. 

126. spacer 16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 7, identity: 0.781

cggtccttcaccggcgagtccgtcggcgtcca	CRISPR spacer
atggccttcaccggcaagtccgtcgccgccga	Protospacer
  * ***********.********* **.* *

127. spacer 16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 7, identity: 0.781

cggtccttcaccggcgagtccgtcggcgtcca	CRISPR spacer
atggccttcaccggcaagtccgtcgccgccga	Protospacer
  * ***********.********* **.* *

128. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019795 (Thermus thermophilus strain AA2-29 plasmid pAA229, complete sequence) position: , mismatch: 7, identity: 0.781

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ggccacgccgaagagggcgaggagggggtggg	Protospacer
*.* .******.*************.**. **

129. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019793 (Thermus thermophilus strain AA2-20 plasmid pAA220, complete sequence) position: , mismatch: 7, identity: 0.781

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ggccacgccgaagagggcgaggagggggtggg	Protospacer
*.* .******.*************.**. **

130. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 7, identity: 0.781

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ggccacgccgaagagggcgaggagggggtggg	Protospacer
*.* .******.*************.**. **

131. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_017588 (Thermus thermophilus JL-18 plasmid pTTJL1801, complete sequence) position: , mismatch: 7, identity: 0.781

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ggccacgccgaagagggcgaggagggggtggg	Protospacer
*.* .******.*************.**. **

132. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034811 (Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ttcaccgccgagctgggcgaggaggaggccga	Protospacer
  *. *******  *****************.

133. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
gggccggccgaggtgggcgaggaggcggccgg	Protospacer
*.    ******* *********** ******

134. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MT936332 (Streptomyces phage phiRKBJ001, complete genome) position: , mismatch: 7, identity: 0.781

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ccggtcgtcgaggaggccgaggaggaggccga	Protospacer
   * **.******** **************.

135. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_009806 (Kineococcus radiotolerans SRS30216 = ATCC BAA-149 plasmid pKRAD01, complete sequence) position: , mismatch: 7, identity: 0.781

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
caggccgatgagcaggccgaggaggaggccgg	Protospacer
 * * ** .*** *** ***************

136. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MT658803 (Mycobacterium phage Reindeer, complete genome) position: , mismatch: 7, identity: 0.781

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
cactacggcgaggagggcgcggaggaggccaa	Protospacer
 ** .** *********** **********..

137. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010826 (Thermus aquaticus Y51MC23 plasmid pTA78, complete sequence) position: , mismatch: 7, identity: 0.781

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
gtggcgggcgaggagggcgaggaggaccccgg	Protospacer
*  *  * ******************  ****

138. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006370 (Aureimonas sp. AU20 plasmid pAU20c, complete sequence) position: , mismatch: 7, identity: 0.781

gacggcgccgaggagggcgaggagg---aggccgg	CRISPR spacer
atcggcgccgaggacggcgagaaggtccaggc---	Protospacer
. ************ ******.***   ****   

139. spacer 16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011665 (Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence) position: , mismatch: 7, identity: 0.781

aaaccg--atcctcaccatcatcatctgcaccgg	CRISPR spacer
--atcgacacgctcaccttcaccatctgcaccgg	Protospacer
  *.**  *. ****** ***.************

140. spacer 16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033582 (Streptomyces sp. ADI95-16 plasmid pADI95-16a, complete sequence) position: , mismatch: 7, identity: 0.781

aaaccg--atcctcaccatcatcatctgcaccgg	CRISPR spacer
--atcgacacgctcaccttcaccatctgcaccgg	Protospacer
  *.**  *. ****** ***.************

141. spacer 5.10|2376877|34|NZ_CP042266|CRT matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 8, identity: 0.765

gcaagctgcgcggcaagggcgt-ccgaccgtccgt	CRISPR spacer
gcaagctgcgagccaagggcgtcccgattatctc-	Protospacer
********** * ********* ****...**.  

142. spacer 5.15|2376548|37|NZ_CP042266|PILER-CR,CRISPRCasFinder matches to NZ_CP049837 (Gordonia terrae strain RL-JC02 plasmid pPAE01, complete sequence) position: , mismatch: 8, identity: 0.784

gtgacgatcgcgacgtgcccgggccagaagaccaagg	CRISPR spacer
cgggcgatcgcgacgtgcccgggccagaggatgaggt	Protospacer
  *.************************.**. *.* 

143. spacer 7.4|2395684|35|NZ_CP042266|PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.771

catcgcccggacgatcagcgcccgcgcatccgccc	CRISPR spacer
ctcgacgagggcgatcagcgcccgcgcctccgccc	Protospacer
* . .*  **.**************** *******

144. spacer 7.5|2395748|34|NZ_CP042266|PILER-CR matches to NZ_CP003988 (Streptomyces sp. 769 plasmid pSGZL, complete sequence) position: , mismatch: 8, identity: 0.765

caggtattcgtcggcggcttgccgcatgtcctcg	CRISPR spacer
gatgtcggcttcggcggcttgccgaatgtgctcg	Protospacer
 * **   * ************** **** ****

145. spacer 7.9|2395685|34|NZ_CP042266|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.765

atcgcccggacgatcagcgcccgcgcatccgccc	CRISPR spacer
tcgacgagggcgatcagcgcccgcgcctccgccc	Protospacer
 . .*  **.**************** *******

146. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 8, identity: 0.733

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
ttaccggaacgaggtgccgggggcggtgac	Protospacer
    ***.*** ****************  

147. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.733

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
gagcgaggacgcggtgccggaggcggtgaa	Protospacer
*.   .**************.******* .

148. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP023977 (Streptomyces alboflavus strain MDJK44 plasmid pMDJK44.2, complete sequence) position: , mismatch: 8, identity: 0.733

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
acggcgggacgctgtgacgggggcggtcat	Protospacer
.  ********* *** **********   

149. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 8, identity: 0.733

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
ccggcgggaggcggtgccggcggcggaggc	Protospacer
   ****** ********** ***** *  

150. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to NC_004808 (Streptomyces rochei plasmid pSLA2-L DNA, complete sequence) position: , mismatch: 8, identity: 0.733

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
gacgcggggcacggtgccgggggcggccgc	Protospacer
*..*****.*.***************.   

151. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggctgatctcctcggcgcggaaggcttcct------	Protospacer
******.****** **********      ***      

152. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

153. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggctgatctcctcggcgcggaaggcttcct------	Protospacer
******.****** **********      ***      

154. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

155. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

156. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggctgatctcctcggcgcggaaggcttcct------	Protospacer
******.****** **********      ***      

157. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

158. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

159. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

160. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

161. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

162. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

163. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

164. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

165. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

166. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

167. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP022191 (Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
acctgcgaatctcaccggcggggacctgcgggc	Protospacer
.*  ** .******.***** *********** 

168. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

169. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

170. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

171. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

172. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

173. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

174. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

175. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

176. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 8, identity: 0.758

gcaggccgatctcatcggcgcgga------cctgcggga	CRISPR spacer
gcaggcagatctcctcggcgcggaacgcctcct------	Protospacer
****** ****** **********      ***      

177. spacer 16.1|7607071|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054622 (Azospirillum oryzae strain KACC 14407 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.75

atgacggcaaccacgagcaccgtgaagagaat	CRISPR spacer
ttgacggcggccacgagcaccgtgacgtcaca	Protospacer
 *******..*************** *  *  

178. spacer 16.1|7607071|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039651 (Azospirillum sp. TSA2s plasmid p1) position: , mismatch: 8, identity: 0.75

atgacggcaaccacgagcaccgtgaagagaat	CRISPR spacer
ttgacggcggccacgagcaccgtgacgtcaca	Protospacer
 *******..*************** *  *  

179. spacer 16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 8, identity: 0.75

agccggggcatagcgcggaacgcggccgtcag	CRISPR spacer
gtcagttgaatcgcgcgaaacgcggccgtcag	Protospacer
. * *  * ** *****.**************

180. spacer 16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028970 (Aminobacter sp. MSH1 plasmid pUSP2, complete sequence) position: , mismatch: 8, identity: 0.75

gggttcggcctgccggtcatcgctgcctacta	CRISPR spacer
gactgcggcctgccgcccatcgctgcctcgtt	Protospacer
*. * ********** .***********  * 

181. spacer 16.9|7607551|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_014214 (Meiothermus silvanus DSM 9946 plasmid pMESIL02, complete sequence) position: , mismatch: 8, identity: 0.75

cgcacggaggacatcgcacgcctgcacagcac	CRISPR spacer
cgcccggaggacatcgcccgcctgggcgagat	Protospacer
*** ************* ****** .*.. *.

182. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
tctgcggacgaggcgggcgaggaggaggcggg	Protospacer
  .*  * ***** *************** **

183. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
gacgacgccgatgagggcgaggatggtgagcg	Protospacer
****.****** *********** *. *   *

184. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
gacgacgccgatgagggcgaggatggtgagcg	Protospacer
****.****** *********** *. *   *

185. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016313 (Thermus brockianus strain GE-1 plasmid pTB1, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ggcggcgaggaggagggcgaggagggcgaggc	Protospacer
*.*****  ****************. *  * 

186. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ggtgaccgggaggtggccgaggaggaggccgg	Protospacer
*..*.*   **** ** ***************

187. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ggtgaccgggaggtggccgaggaggaggccgg	Protospacer
*..*.*   **** ** ***************

188. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ccctgcgccgaggtggccgaggaggaggcgct	Protospacer
  * ********* ** ************   

189. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
cggcgcgccgaggaggccgagcaggaggcggc	Protospacer
 .  ************ **** ******* * 

190. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg--	CRISPR spacer
atcggcgccgaggacggcgagaag--gtccagtc	Protospacer
. ************ ******.**  * **.*  

191. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012383 (Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
tccggcgccgaggaggtcgaagaggctccagg	Protospacer
  ************** ***.****   * **

192. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ctcggcgccgagcagggcgtggaggtcaccgt	Protospacer
  ********** ****** *****  .*** 

193. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134461 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 19, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
cccggcgccgaggagcgcgagcaggtcggcga	Protospacer
  ************* ***** ***  * **.

194. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045122 (Rubrobacter sp. SCSIO 52915 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
acctccgacgaggagcgcgaggaggaggaccg	Protospacer
. *  ** ******* ************ * *

195. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to KR053194 (Gordonia phage GAL1, complete genome) position: , mismatch: 8, identity: 0.75

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
cccggcggcgcggagggcgaggaggtgttcgc	Protospacer
  ***** ** ************** * .** 

196. spacer 16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032703 (Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

aaaccgatcctcaccatcatcatctgcaccgg	CRISPR spacer
aggccgatccccgccatcatcatctgatcatg	Protospacer
*..*******.*.*************  *  *

197. spacer 16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MG065677 (UNVERIFIED: Campylobacter phage A13b, complete genome) position: , mismatch: 8, identity: 0.75

aaaccgatcctcaccatcatcatctgcaccgg	CRISPR spacer
aacaagatcttcaccttcatcatctgcatcac	Protospacer
**   ****.***** ************.*. 

198. spacer 16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MG065644 (UNVERIFIED: Campylobacter phage A147, complete genome) position: , mismatch: 8, identity: 0.75

aaaccgatcctcaccatcatcatctgcaccgg	CRISPR spacer
aacaagatcttcaccttcatcatctgcatcac	Protospacer
**   ****.***** ************.*. 

199. spacer 16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MG022439 (Phage 203, complete genome) position: , mismatch: 8, identity: 0.75

aaaccgatcctcaccatcatcatctgcaccgg	CRISPR spacer
aacaagatcttcaccttcatcatctgcatcac	Protospacer
**   ****.***** ************.*. 

200. spacer 16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MH752840 (Escherichia phage vB_EcoM-Pr121LW, complete genome) position: , mismatch: 8, identity: 0.75

aaaccgatcctcaccatcatcatctgcaccgg	CRISPR spacer
aacaagatcttcaccttcatcatctgcatcac	Protospacer
**   ****.***** ************.*. 

201. spacer 16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MG065674 (UNVERIFIED: Campylobacter phage A140, complete genome) position: , mismatch: 8, identity: 0.75

aaaccgatcctcaccatcatcatctgcaccgg	CRISPR spacer
aacaagatcttcaccttcatcatctgcatcac	Protospacer
**   ****.***** ************.*. 

202. spacer 16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MG065662 (UNVERIFIED: Campylobacter phage A142, complete genome) position: , mismatch: 8, identity: 0.75

aaaccgatcctcaccatcatcatctgcaccgg	CRISPR spacer
aacaagatcttcaccttcatcatctgcatcac	Protospacer
**   ****.***** ************.*. 

203. spacer 16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MG065672 (UNVERIFIED: Campylobacter phage A141, complete genome) position: , mismatch: 8, identity: 0.75

aaaccgatcctcaccatcatcatctgcaccgg	CRISPR spacer
aacaagatcttcaccttcatcatctgcatcac	Protospacer
**   ****.***** ************.*. 

204. spacer 16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MG065690 (UNVERIFIED: Campylobacter phage A135, complete genome) position: , mismatch: 8, identity: 0.75

aaaccgatcctcaccatcatcatctgcaccgg	CRISPR spacer
aacaagatcttcaccttcatcatctgcatcac	Protospacer
**   ****.***** ************.*. 

205. spacer 16.15|7607911|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MG022440 (Phage 206, complete genome) position: , mismatch: 8, identity: 0.75

aaaccgatcctcaccatcatcatctgcaccgg	CRISPR spacer
aacaagatcttcaccttcatcatctgcatcac	Protospacer
**   ****.***** ************.*. 

206. spacer 2.2|811021|31|NZ_CP042266|CRISPRCasFinder matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 9, identity: 0.71

gggcgggcccgggctcgcgggggtcccgttc	CRISPR spacer
cacggcgcccgggctggcgggcgtcccgtcg	Protospacer
 .  * ********* ***** *******. 

207. spacer 2.4|811027|31|NZ_CP042266|PILER-CR matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 9, identity: 0.71

gggcgggcccgggctcgcgggggtcccgttc	CRISPR spacer
cacggcgcccgggctggcgggcgtcccgtcg	Protospacer
 .  * ********* ***** *******. 

208. spacer 6.1|2385389|37|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_013698 (Clavibacter phage CMP1, complete genome) position: , mismatch: 9, identity: 0.757

cgccgcggctggccgtggtcgcggcggctcggactag	CRISPR spacer
cgctgcggctggccgtggtggcggcggcggtggcgga	Protospacer
***.*************** ********   *.* ..

209. spacer 6.2|2385455|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046903 (Pseudomonas stutzeri strain PM101005 plasmid p1_PM101005, complete sequence) position: , mismatch: 9, identity: 0.75

gagtacgtggcggtggcggcgagtgccccgatctcg	CRISPR spacer
caggacgttgcggtggcggcgagtgccctggcgttc	Protospacer
 ** **** *******************.*.. *. 

210. spacer 6.22|2386767|36|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

cgggaccccaaaggcaagcgccgctcggtcggtgac	CRISPR spacer
cgtcaccccaaagccaagcgccggtcggtccacctc	Protospacer
**  ********* ********* ****** ..  *

211. spacer 7.4|2395684|35|NZ_CP042266|PILER-CR matches to NZ_CP035710 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence) position: , mismatch: 9, identity: 0.743

catcgcccggacgatcagcgcccgcgcatccgccc	CRISPR spacer
cgcctggccgacgaccagcgcccgcgcatcctcca	Protospacer
*..*   * *****.**************** ** 

212. spacer 7.6|2395478|36|NZ_CP042266|CRISPRCasFinder matches to NZ_CP015092 (Pelagibaca abyssi strain JLT2014 plasmid pPABY3, complete sequence) position: , mismatch: 9, identity: 0.75

gccccggatggctggcagacgagatccgcgagtacc	CRISPR spacer
tcaccggatggctggcagaggagatcggcgtccccg	Protospacer
 * **************** ****** ***  . * 

213. spacer 7.6|2395478|36|NZ_CP042266|CRISPRCasFinder matches to NZ_CP049815 (Monaibacterium sp. ALG8 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.75

gccccggatggctggcagacgagatccgcgagtacc	CRISPR spacer
tcaccggatggctggcagaggagatcggcgtccccg	Protospacer
 * **************** ****** ***  . * 

214. spacer 7.6|2395478|36|NZ_CP042266|CRISPRCasFinder matches to NZ_CP010861 (Marinovum algicola DG 898 plasmid pMaD6, complete sequence) position: , mismatch: 9, identity: 0.75

gccccggatggctggcagacgagatccgcgagtacc	CRISPR spacer
tcaccggatggctggcagaggagatcggcgtccccg	Protospacer
 * **************** ****** ***  . * 

215. spacer 7.9|2395685|34|NZ_CP042266|CRISPRCasFinder matches to NZ_CP035710 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence) position: , mismatch: 9, identity: 0.735

atcgcccggacgatcagcgcccgcgcatccgccc	CRISPR spacer
gcctggccgacgaccagcgcccgcgcatcctcca	Protospacer
..*   * *****.**************** ** 

216. spacer 7.9|2395685|34|NZ_CP042266|CRISPRCasFinder matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 9, identity: 0.735

atcgcccggacgatcagcgcccgcgcatccgccc	CRISPR spacer
cccgcccggacgagcagctcccgcgccgcggtcg	Protospacer
 .*********** **** *******  * *.* 

217. spacer 7.9|2395685|34|NZ_CP042266|CRISPRCasFinder matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 9, identity: 0.735

atcgcccggacgatcagcgcccgcgcatccgccc	CRISPR spacer
tgcgcctggacgatcaccgcccgcgccccctggc	Protospacer
  ****.********* ********* .**   *

218. spacer 7.14|2395684|36|NZ_CP042266|CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.75

catcgcccggacgatcagcgcccgcgcatccgcccc	CRISPR spacer
ctcgacgagggcgatcagcgcccgcgcctccgcccg	Protospacer
* . .*  **.**************** ******* 

219. spacer 8.2|2448148|30|NZ_CP042266|CRT matches to MN908689 (Arthrobacter phage DrSierra, complete genome) position: , mismatch: 9, identity: 0.7

ggtgcgggacgcggtgccgggggcggtgcg	CRISPR spacer
ccagcgggagccggtgccgggggcggccgt	Protospacer
   ******  ***************.   

220. spacer 9.2|2633470|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

cacctccatcagcggaatccccagaacatccgc	CRISPR spacer
ggtggcgatcagcggaatacccagcacatcctc	Protospacer
 ..  * *********** ***** ****** *

221. spacer 14.2|5362949|33|NZ_CP042266|CRISPRCasFinder matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

gcaggccgatctcatcggcgcggacctgcggga	CRISPR spacer
ccaggcccatctcgtcggcgcggacgaacttgg	Protospacer
 ****** *****.***********  .*  *.

222. spacer 16.3|7607191|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 9, identity: 0.719

gcgatgctggaaggcacggcctgggcgctcac	CRISPR spacer
cagccgccggaaggcccggcctgggcgcgcca	Protospacer
  * .**.******* ************ *  

223. spacer 16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023993 (Streptomyces malaysiensis strain DSM 4137 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

agccggggcatagcgcggaacgcggccgtcag	CRISPR spacer
ctccattccatagcgccggacgcggccgtcac	Protospacer
  **.   ******** *.************ 

224. spacer 16.5|7607311|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

ctacgagcgagcggtggaggcggctgcctagc	CRISPR spacer
gcaggagcgagcgctggcggcggctgccgttg	Protospacer
 .* ********* *** **********    

225. spacer 16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047174 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gtctcttccgtccctgcgaccggcagcccgca	CRISPR spacer
gcgccctccgtcccggcgaccggctgcccatc	Protospacer
*. .*.******** ********* ****.. 

226. spacer 16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 9, identity: 0.719

gtctcttccgtccctgcgaccggcagcccgca	CRISPR spacer
ttcaagcttgtccctgcaaccggcagcccaca	Protospacer
 **   ...********.***********.**

227. spacer 16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053206 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1D, complete sequence) position: , mismatch: 9, identity: 0.719

gtctcttccgtccctgcgaccggcagcccgca	CRISPR spacer
gtctcttccttcactgcgaccggtgaagaaca	Protospacer
********* ** **********...   .**

228. spacer 16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 9, identity: 0.719

gggttcggcctgccggtcatcgctgcctacta	CRISPR spacer
tatttcggcctgccgctgatcgctgccacatt	Protospacer
 . ************ * *********   * 

229. spacer 16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 9, identity: 0.719

gggttcggcctgccggtcatcgctgcctacta	CRISPR spacer
tatttcggcctgccgctgatcgctgccacatt	Protospacer
 . ************ * *********   * 

230. spacer 16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 9, identity: 0.719

gggttcggcctgccggtcatcgctgcctacta	CRISPR spacer
gggttcggcctgccgatcctcgccgtgtgagc	Protospacer
***************.** ****.*. *.   

231. spacer 16.8|7607491|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053911 (Hymenobacter sp. BRD128 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

actcatccggacagccgttgccagcaaggaag	CRISPR spacer
agcagttcggacagcagtagccagcaaggagc	Protospacer
* . .*.******** ** ***********. 

232. spacer 16.9|7607551|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgcacggaggacatcgcacgcctgcacagcac	CRISPR spacer
gcggcacaggacatcgcccgcctggacagcgc	Protospacer
   .*. ********** ****** *****.*

233. spacer 16.9|7607551|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025540 (Vibrio harveyi strain 345 plasmid p345-67, complete sequence) position: , mismatch: 9, identity: 0.719

cgcacggaggacatcgcacgcctgcacagcac	CRISPR spacer
acggcggaggatttcgcacgcctgcacgtcat	Protospacer
   .*******. **************. **.

234. spacer 16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

cggtcctt------caccggcgagtccgtcggcgtcca	CRISPR spacer
------ttcaaacgcaccggccagaccgtcggcgtcct	Protospacer
      **      ******* ** ************ 

235. spacer 16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 9, identity: 0.719

cggtcctt------caccggcgagtccgtcggcgtcca	CRISPR spacer
------ttcaaacgcaccggccagaccgtcggcgtcct	Protospacer
      **      ******* ** ************ 

236. spacer 16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 9, identity: 0.719

cggtccttcaccggcgagtccgtcggcgtcca	CRISPR spacer
cgccagaccaccggcgagaccgccggcgtccc	Protospacer
** .   .********** ***.******** 

237. spacer 16.10|7607611|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cggtccttcaccggcgagtccgtcggcgtcca	CRISPR spacer
gcgggcaacaccggcgagtccttcggcttccc	Protospacer
  *  *  ************* ***** *** 

238. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594692 (Variovorax sp. WDL1 plasmid 4) position: , mismatch: 9, identity: 0.719

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
gcaggcgcagaggagggcggggaggatgaatc	Protospacer
*  ***** **********.****** *    

239. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
cccgtaatagagcaggacgaggaggaggccgg	Protospacer
  **  .. *** ***.***************

240. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MK937599 (Gordonia phage Dmitri, complete genome) position: , mismatch: 9, identity: 0.719

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
ccgggcgtcgacgagggcgaggaggacggtcg	Protospacer
   ****.*** ************** * . *

241. spacer 16.13|7607791|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

gtcgtctccaccggatccgacggcgccgtccg	CRISPR spacer
ttcccggtcaccggccccgacggcgccgtcct	Protospacer
 ** .  .****** .*************** 

242. spacer 5.2|2376353|35|NZ_CP042266|CRT matches to NZ_CP035420 (Leisingera sp. NJS204 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.714

aggctttggagctgccgcgccgcaagcgccgcgcg	CRISPR spacer
gcatcgcgcagctgccgcgccgccagcgccgcgcc	Protospacer
. ... .* ************** ********** 

243. spacer 5.4|2376484|34|NZ_CP042266|CRT matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.706

atcttcagcg-------cggcgcaggtgtccggcgggggcc	CRISPR spacer
-------gtgggggtgccggcgcagctgtccggcggggtcc	Protospacer
       *.*       ******** ************ **

244. spacer 5.4|2376484|34|NZ_CP042266|CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 10, identity: 0.706

atcttcagcgcggcgcaggtgtccggcgggggcc	CRISPR spacer
ctgcctggcacggcgcaggtgtccggcggtggaa	Protospacer
 * ....**.******************* **  

245. spacer 5.4|2376484|34|NZ_CP042266|CRT matches to CP054924 (Verrucosispora sp. NA02020 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

atcttcagcgcggcgcaggtgtccggcgggggcc	CRISPR spacer
gcggtcggcgcggcgcaggtgtccggaggtgttg	Protospacer
..  **.******************* ** * . 

246. spacer 5.4|2376484|34|NZ_CP042266|CRT matches to NZ_CP013069 (Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence) position: , mismatch: 10, identity: 0.706

atcttcagcgcggcgcaggtgtccggcgggggcc	CRISPR spacer
tccatcagcccggcgcaggtttccggcgcaatct	Protospacer
 .* ***** ********** ******* .. *.

247. spacer 5.8|2376746|36|NZ_CP042266|CRT matches to NC_004933 (Streptomyces lividans 1326 plasmid SLP2, complete sequence) position: , mismatch: 10, identity: 0.722

gtcgtgggtccggtctggccggctcccctcaccgcc	CRISPR spacer
cctgacgcgccgggctgtccggctcccctcaccgcg	Protospacer
 ..*  *  **** *** ***************** 

248. spacer 5.14|2376484|35|NZ_CP042266|PILER-CR,CRISPRCasFinder matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 10, identity: 0.714

atcttcagcgcggcgcaggtgtccggcgggggcct	CRISPR spacer
ctgcctggcacggcgcaggtgtccggcggtggaat	Protospacer
 * ....**.******************* **  *

249. spacer 6.15|2386309|35|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018516 (Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence) position: , mismatch: 10, identity: 0.714

gctgaccttctggtggccctgctggatgatccggc	CRISPR spacer
atggaccatctggtggccttgctggatgaaacctg	Protospacer
.. **** **********.**********  *   

250. spacer 7.1|2395477|37|NZ_CP042266|PILER-CR matches to NZ_CP015092 (Pelagibaca abyssi strain JLT2014 plasmid pPABY3, complete sequence) position: , mismatch: 10, identity: 0.73

cgccccggatggctggcagacgagatccgcgagtacc	CRISPR spacer
atcaccggatggctggcagaggagatcggcgtccccg	Protospacer
  * **************** ****** ***  . * 

251. spacer 7.1|2395477|37|NZ_CP042266|PILER-CR matches to NZ_CP049815 (Monaibacterium sp. ALG8 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.73

cgccccggatggctggcagacgagatccgcgagtacc	CRISPR spacer
atcaccggatggctggcagaggagatcggcgtccccg	Protospacer
  * **************** ****** ***  . * 

252. spacer 7.1|2395477|37|NZ_CP042266|PILER-CR matches to NZ_CP010861 (Marinovum algicola DG 898 plasmid pMaD6, complete sequence) position: , mismatch: 10, identity: 0.73

cgccccggatggctggcagacgagatccgcgagtacc	CRISPR spacer
atcaccggatggctggcagaggagatcggcgtccccg	Protospacer
  * **************** ****** ***  . * 

253. spacer 16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to KU935731 (Mycobacterium phage Phrann, complete genome) position: , mismatch: 10, identity: 0.688

agccggggcatagcgcggaacgcggccgtcag	CRISPR spacer
ttcgagggcatggcgcagaacgcggccggttt	Protospacer
  * .******.****.*********** .  

254. spacer 16.4|7607251|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to KX756439 (Mycobacterium phage PhancyPhin, complete genome) position: , mismatch: 10, identity: 0.688

agccggggcatagcgcggaacgcggccgtcag	CRISPR spacer
ttcgagggcatggcgcagaacgcggccggttt	Protospacer
  * .******.****.*********** .  

255. spacer 16.5|7607311|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010326 (Pantoea sp. PSNIH1 plasmid pPSP-3a9, complete sequence) position: , mismatch: 10, identity: 0.688

ctacgagcgagcggtggaggcggctgcctagc	CRISPR spacer
gactgaccgcgcggtggaggcggctgcccgcg	Protospacer
   .** ** ******************..  

256. spacer 16.5|7607311|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017899 (Sphingopyxis sp. FD7 plasmid pSFD01, complete sequence) position: , mismatch: 10, identity: 0.688

ctacgagcgagcggtggaggcggctgcctagc	CRISPR spacer
tgtcgcgcgagcggtggatgcggctgttccac	Protospacer
.  ** ************ *******... .*

257. spacer 16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

gtctcttccgtccctgcgaccggcagcccgca	CRISPR spacer
acctcttccgtcccggcgaccgccactgggtg	Protospacer
..************ ******* ** .  *..

258. spacer 16.6|7607371|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

gtctcttccgtccctgcgaccggcagcccgca	CRISPR spacer
acctcttccgtcccggcgaccgccactgggtg	Protospacer
..************ ******* ** .  *..

259. spacer 16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to MK433266 (Streptomyces phage Shawty, complete genome) position: , mismatch: 10, identity: 0.688

gggttcggcctgccggtcatcgctgcctacta	CRISPR spacer
ttgttcggcgtgccggtcgtcgctgaggcgga	Protospacer
  ******* ********.******      *

260. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 10, identity: 0.688

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
cgcggcgccgaggaggtcgaggcggtcctggc	Protospacer
 .************** ***** **   . * 

261. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 10, identity: 0.688

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
cgcggcgccgaggaggtcgaggcggtcctggc	Protospacer
 .************** ***** **   . * 

262. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 10, identity: 0.688

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
cgcggcgccgaggaggtcgaggcggtcctggc	Protospacer
 .************** ***** **   . * 

263. spacer 16.11|7607671|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to KU998235 (Gordonia phage Bowser, complete genome) position: , mismatch: 10, identity: 0.688

gacggcgccgaggagggcgaggaggaggccgg	CRISPR spacer
tcgggcgtcgacgagggcgaggaggacagtcg	Protospacer
   ****.*** ************** . . *

264. spacer 5.14|2376484|35|NZ_CP042266|PILER-CR,CRISPRCasFinder matches to CP054924 (Verrucosispora sp. NA02020 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

atcttcagcgcggcgcaggtgtccggcgggggcct	CRISPR spacer
gcggtcggcgcggcgcaggtgtccggaggtgttgg	Protospacer
..  **.******************* ** * .  

265. spacer 5.18|2376746|37|NZ_CP042266|PILER-CR,CRISPRCasFinder matches to NC_004933 (Streptomyces lividans 1326 plasmid SLP2, complete sequence) position: , mismatch: 11, identity: 0.703

gtcgtgggtccggtctggccggctcccctcaccgccg	CRISPR spacer
cctgacgcgccgggctgtccggctcccctcaccgcgt	Protospacer
 ..*  *  **** *** *****************  

266. spacer 7.11|2395477|38|NZ_CP042266|CRT matches to NZ_CP015092 (Pelagibaca abyssi strain JLT2014 plasmid pPABY3, complete sequence) position: , mismatch: 11, identity: 0.711

cgccccggatggctggcagacgagatccgcgagtaccg	CRISPR spacer
atcaccggatggctggcagaggagatcggcgtccccgt	Protospacer
  * **************** ****** ***  . *  

267. spacer 7.11|2395477|38|NZ_CP042266|CRT matches to NZ_CP049815 (Monaibacterium sp. ALG8 plasmid unnamed4, complete sequence) position: , mismatch: 11, identity: 0.711

cgccccggatggctggcagacgagatccgcgagtaccg	CRISPR spacer
atcaccggatggctggcagaggagatcggcgtccccgt	Protospacer
  * **************** ****** ***  . *  

268. spacer 7.11|2395477|38|NZ_CP042266|CRT matches to NZ_CP010861 (Marinovum algicola DG 898 plasmid pMaD6, complete sequence) position: , mismatch: 11, identity: 0.711

cgccccggatggctggcagacgagatccgcgagtaccg	CRISPR spacer
atcaccggatggctggcagaggagatcggcgtccccgt	Protospacer
  * **************** ****** ***  . *  

269. spacer 16.7|7607431|32|NZ_CP042266|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR723672 (Rhizobium flavum strain YW14 plasmid 3) position: , mismatch: 11, identity: 0.656

gggttcggcctgccggtcatcgctgcctacta	CRISPR spacer
catgtcggcctgcctggcatcgctgccgcaag	Protospacer
 .  ********** * **********    .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	4709802 : 4725488	11	Streptomyces_phage(66.67%)	tail	NA
DBSCAN-SWA_2	6498137 : 6513417	16	Streptomyces_phage(76.92%)	portal,tail,terminase	NA
DBSCAN-SWA_3	6516469 : 6527340	13	Streptomyces_phage(54.55%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP042266|4709802:4725488|DBSCAN-SWA
CTTGGCCGCCTCGCGCAACGCCTCGACCGCGAATACGAACCACGGCGCCAGCACCGCCCCGCTGCGCATCTCCTTTGCAAAGATCAAAGAGCCCCTCGAGGTTCCGAACCTCCTCGCGCTCCAGACCGAGAGCTTTGACTGGCTGCTCGGCAATGCCGCGTGGAAGGCTCGGGTCGAGGCGGCCCTGGACAGCGGACAGGACGTCCCCACCAAGTCCGGTCTGGAGGAGATCTTCGAGGAGATCTCCCCGATCGAGGACTTCAGCGGGTCGATGTCGCTGACTTTCCGTGACCACCGCTTCGAGCCTCCGAAGAACTCGATCGACGAGTGCAAGGACCGCGACTTCACCTACGCCGCGCCGCTCTTCGTCACGGCGGAGTTCACCAACAACGAGACCGGCGAGATCAAGTCGCAGACGGTCTTCATGGGTGACTTCCCGCTGATGACCCACAAGGGCACCTTCGTGATCAACGGCACCGAGCGTGTCGTTGTATCGCAGCTGGTGCGCTCGCCGGGCGTCTACTTCGACTCCAACATCGACAAGACGTCCGACAAGGACATCTTCACCGCCAAGATCATCCCGTCCCGGGGTGCCTGGCTGGAGATGGAGATCGACAAGCGCGACATGGTCGGTGTCCGCATCGACCGCAAGCGCAAGCAGTCCGTCACCGTGCTGCTGAAGGCGCTGGGCTGGACCACCGAGCAGATCCTGCAGGAGTTCGGCGAGTACGAGTCCATGCGCGCCACCCTGGAGAAGGACCACACCCAGGGCCAGGACGACGCGCTGCTCGACATCTACCGCAAGCTGCGTCCGGGCGAGCCGCCCACCCGTGAGGCCGCGCAGACGCTGCTCGAGAACCTCTACTTCAACCCCAAGCGCTACGACCTGGCCAAGGTCGGCCGCTACAAGGTCAACAAGAAGCTGGGCGCGGACGAGCCGCTGAACGCGGGTGTCCTGACCACCGACGACGTCATCGCCACCATCAAGTACCTGGTGAAGCTGCACGCCGGCGAGGTCGAGACGATCGGCGAGAACGGCAGTGAGATCGTCGTCGAGACCGACGACATCGACCACTTCGGCAACCGCCGTCTCCGCAATGTCGGTGAGCTGATCCAGAACCAGGTCCGTACGGGTCTCGCCCGTATGGAGCGGGTCGTGCGCGAGCGCATGACCACTCAGGACGTCGAGGCGATCACGCCGCAGACCCTGATCAACATCCGGCCGGTCGTCGCCTCCATCAAGGAGTTCTTCGGCACCAGCCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTGTCGGGGCTCACCCACAAGCGCCGTCTCTCGGCGCTCGGCCCGGGTGGTCTCTCCCGCGAGCGGGCCGGCTTCGAAGTCCGTGACGTGCACCCCTCGCACTACGGCCGCATGTGCCCGATCGAGACCCCCGAAGGCCCGAACATCGGTCTGATCGGCTCGCTCGCCTCCTACGGCCGGGTCAACGCCTTCGGCTTCGTCGAGACTCCGTACCGCAAGGTCACCGACGGCCAGGTCACCGACGAGGTGGACTACCTGACCGCCGACGAGGAGGACCGCTTCGTCATCGCCCAGGCGAACGCCACGCTCACCGACGAGCTGCGTTTCGCCGAGGCCCGGGTGCTGGTCCGCCGCCGTGGCGGCGAGGTCGACTACGTCCCGCCGACCGAGGTCGACTACATGGACGTCTCGCCGCGCCAGATGGTGTCGGTCGCGACCGCCATGATCCCCTTCCTGGAGCACGACGACGCCAACCGTGCCCTCATGGGCGCGAACATGATGCGCCAGGCCGTTCCGCTGATCACGGCCGAGGCGCCGCTGGTCGGTACCGGCATGGAGTACCGCTGCGCCGTCGACGCCGGTGACGTGATCAAGGCCGAGAAGGACGGTGTGGTCCAGGAGGTCTCCGCGGACTACATCACCGTCGGCAACGACGACGGCACCTACACCACCTACCGGGTGGCCAAGTTCTCCCGTTCCAACCAGGGCACTTCGGTCAACCAGAAGGTCATCGTCGCCGAGGGCGACCGGGTCGTCGAGAGCCAGGTCCTGGCCGACGGTCCGGCCACCGAGAACGGCGAGATGGCGCTCGGCAAGAACCTGCTGGTCGCGTTCATGCCGTGGGAGGGTCACAACTACGAGGACGCGATCATCCTGTCGCAGCGCCTCGTCCAGGACGACGTCCTCTCCTCGATCCACATCGAGGAGCACGAGGTCGACGCCCGTGACACCAAGCTCGGCCCCGAGGAGATCACCCGGGACATCCCGAACGTCTCCGAGGAGGTCCTCGCCGACCTCGACGAGCGCGGCATCATCCGCATCGGTGCCGAGGTCGTCGCCGGCGACATCCTCGTCGGCAAGGTCACCCCGAAGGGCGAGACCGAGCTGACCCCCGAGGAGCGGCTGCTTCGCGCGATCTTCGGCGAGAAGGCCCGTGAGGTCCGTGACACCTCGCTGAAGGTGCCGCACGGCGAGATCGGCAAGGTCATCGGCGTCCGCGTCTTCGACCGCGAGGAAGGCGACGAGCTTCCGCCCGGCGTCAACCAGCTGGTCCGGGTCTACGTGGCCCAGAAGCGCAAGATCACCGACGGTGACAAGCTGGCCGGCCGCCACGGCAACAAGGGTGTCATCTCCAAGATCCTGCCGATCGAGGACATGCCGTTCCTGGAGGACGGCACCCCGGTCGACATCATCCTCAACCCGCTCGGCGTCCCGTCCCGGATGAACCCGGGACAGGTCCTCGAAATCCACCTCGGCTGGCTCGCCAGCCAGGGCTGGAAGGTCGAGGGCAACGAGGAGTGGATGGAGCGGCTGAAGGCGATCGGCGCGGACGACGTCCGCCCGGGCACCAATGTCGCCACCCCGGTCTTCGACGGCGCCCGCGAGGACGAGATCGCCGGTCTCTTCGAGTCGACGATCCCCAACCGCGACGGTGACCGCATGGTCCTGCCGTCCGGTAAGGCGCGGATGTTCGACGGCCGCTCCGGCGAGCCGTTCCCGGACCCGATCTCCGTCGGGTACATGTACATCCTCAAGCTCCACCACCTGGTCGACGACAAGCTGCACGCCCGGTCGACCGGTCCGTACTCGATGATCACCCAGCAGCCGCTGGGTGGTAAGGCCCAGTTCGGTGGCCAGCGATTCGGAGAGATGGAGGTGTGGGCGCTGGAGGCTTACGGCGCCGCCTACGCCCTCCAGGAGCTGCTGACCATCAAGTCCGACGACGTCACCGGCCGCGTGAAGGTCTACGAGGCCATCGTCAAGGGCGAGAACATCCCCGAGCCCGGCATCCCCGAGTCCTTCAAGGTGCTCATCAAGGAGATGCAGTCCCTGTGCCTCAACGTGGAGGTGCTGTCCTCGGACGGCATGTCCATCGAGATGCGCGACACCGACGAGGACGTCTTCCGTGCCGCGGAAGAGCTCGGCATCGACCTGTCCCGGCGCGAGCCGAGCAGCGTCGAAGAGGTCTGACGGGTGTCCGGCCGGGATCACCCCCGTGGTGATCCCGGCCGCTGCCCCGGACCCCGTACAGACCACCTTGAGACACAACCCTGAGAGGGATTGACGCATAGTGCTCGACGTCAACTTCTTCGACGAGCTTCGGATCGGCCTGGCCACCGCTGACGACATCCGCCAGTGGTCGCACGGCGAGGTGAAGAAGCCCGAGACGATCAACTACCGCACGCTCAAGCCCGAAAAGGACGGACTCTTCTGCGAGAAGATCTTCGGTCCTACCCGGGACTGGGAGTGCTACTGCGGCAAGTACAAGCGTGTCCGCTTCAAGGGCATCATCTGTGAGCGCTGTGGCGTCGAGGTCACCCGCGCCAAGGTGCGCCGTGAGCGGATGGGCCACATCGAGCTGGCCGCCCCGGTCACCCACATCTGGTACTTCAAGGGCGTTCCTTCGCGCCTCGGATACCTGCTGGACCTCGCGCCGAAGGACCTCGAGAAGGTCATCTACTTCGCCGCGTACATGATCACGTTCGTGGACGACGAGCGCCGCACCCGCGATCTGCCCTCGCTGGAGGCCCATGTCTCCGTCGAGCGCCAGCAGATCGAGAACCGCCGCGACGCCGACCTCGAGGCCCGCGCCAAGAAGCTCGAGACCGACCTGGGCGAGCTCGAGGCCGAGGGCGCCAAGGCCGATGTGCGCCGCAAGGTGCGCGAGGGCGCCGAGCGCGAGATGAAGCAGCTGCGCGACCGTGCGCAGCGCGAGATCGACCGTCTCGACGAGGTGTGGAGCCGCTTCAAGAACCTCAAGGTCCAGGACCTCGAGGGCGACGAGCTGCTCTACCGCGAGCTGCGCGACCGCTTCGGCACCTACTTCGACGGTTCGATGGGCGCCGCCGCGCTCCAGAAGCGTCTGGAGTCCTTCGATCTGGACGAGGAGGCCGAGCGCCTCCGCGAGATCATCCGGACCGGCAAGGGCCAGAAGAAGACCCGGGCGCTCAAGCGCCTCAAGGTCGTCTCCGCCTTCCTCCAGACCAGCAACAGCCCCAAGGGCATGGTGCTGGACTGCGTTCCGGTCATCCCGCCGGACCTGCGTCCGATGGTGCAGCTCGACGGTGGCCGCTTCGCGACCTCCGACCTCAACGACCTGTACCGCCGCGTCATCAACCGCAACAACCGCCTCAAGCGTCTCCTTGACCTCGGTGCCCCCGAGATCATCGTGAACAACGAGAAGCGGATGCTGCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGCCGCGGCCGTCCGGTCACGGGCCCCGGCAACCGCCCGCTGAAGTCCCTCAGCGACATGCTGAAGGGCAAGCAGGGTCGTTTCCGGCAGAACCTGCTCGGTAAGCGTGTGGACTACTCCGCGCGTTCCGTGATCGTCGTCGGTCCTCAGCTCAAGCTGCACCAGTGCGGTCTGCCGAAGGCCATGGCGCTGGAGCTCTTCAAGCCGTTCGTGATGAAGCGCCTGGTCGACCTGAACCACGCGCAGAACATCAAGTCGGCCAAGCGCATGGTCGAGCGCGGCCGTACCGTCGTGTACGACGTCCTCGAAGAGGTCATCGCCGAGCACCCGGTGCTGCTGAACCGTGCGCCCACGCTGCACCGCCTCGGCATCCAGGCCTTCGAGCCGCAGCTGGTCGAGGGCAAGGCCATCCAGATCCACCCGCTCGTCTGCACCGCGTTCAACGCGGACTTCGACGGTGACCAGATGGCCGTCCACCTGCCGCTCTCCGCGGAGGCGCAGGCCGAGGCCCGCATCCTGATGCTGTCCTCGAACAACATCCTGAAGCCGGCCGACGGCCGTCCCGTCACCATGCCCACCCAGGACATGGTGCTCGGCCTCTTCTTCCTCACCACGGACGAAGAGGAGCGGGAGGTCCGCGGCGAGGGCCGTTCCTTCGGCTCCACGGCCGAGGCGATCATGGCGTTCGACGCCCGTGAGCTGTCCCTCCAGGCCAAGGTCGACATCCGCTTCCCGGTGGGCACCATCCCGCCGCGCGGCTGGACGCCGCCGGCCGACGAGGACCACGAGGGCTACGGCACCTCGTGGCAGCAGGGCGACAGCTTCCGGCTGAAGACCACGCTGGGCCGTGCGCTCTTCAACGAGCTGCTGCCCGAGGACTACCCCTTCGTCGACTACTCCGTCGGCAAGAAGCAGCTCTCCGAGATCGTCAACGACCTCGCCGAGCGCTACCCCAAGGTCATCGTGGCGGCGACGCTCGACAACCTGAAGGCGGCCGGCTTCTACTGGGCCACCCGTTCCGGCGTCACCGTCGCCGTTTCGGACATCGTGGTCCCGGAGGCGAAGAAGGAGATCGTCGCCTCCTACGAGGCCAAGGACGAGCGGATCCAGAAGCAGTACGAGCGCGGCCTGATCACCAAGCAGGAGCGCACGAACGAGCTGATCGACAACTGGACCCGCGCGACCAACGAGGTCGCCGACGCGATGAACGCGAACTTCCCGAAGACCAACCCCATCTTCATGATGGTGGACTCGGGTGCTCGTGGAAACATGATGCAGATGCGTCAGATCGCCGGTATGCGTGGTCTGGTGTCCAACGCCAAGAACGAGACGATTCCGCGTCCCATCAAGGCGTCGTTCCGCGAGGGTCTGTCCGTGCTGGAGTACTTCATCTCCACGCACGGTGCCCGTAAGGGTCTCGCCGACACCGCCCTGCGTACCGCCGACTCGGGTTACCTGACCCGTCGTCTGGTGGACGTCTCGCAGGACGTGATCATCCGCGAGGAGGACTGTGGCACCGAGCGCGGTCTGAAGCTGCGGATCGCCGATCGCGGTGCCGACGGTGTGCTGCGCAAGACCGACAACGTCGAGACGTCGGTCTACGCCCGGATGCTCGCCGAGGACGTCGTCATCGACGGCCGGGTCATCGCGCCCGCCAATGTCGACCTGGGCGATGTGCTCATCGACGCGCTGGTCGGCGCGGGCGTGGAGGAGGTCAAGACCCGCTCGGTCCTGACCTGTGAGTCCGCGGTCGGTACCTGTGCCTTCTGCTACGGCCGTTCGCTGGCCACCGGCAAGCTGGTCGACATCGGTGAGGCGGTCGGCATCATCGCCGCCCAGTCCATCGGTGAGCCCGGTACCCAGCTCACGATGCGTACCTTCCACACCGGTGGTGTGGCCGGTGACGACATCACCCAGGGTCTGCCGCGTGTCGTCGAGCTCTTCGAGGCCCGTACGCCCAAGGGTGTCGCCCCGATCTCGGAGGCGGCCGGCCGCGTCCGGATCGAGGAGACCGAGAAGACCAAGAAGCTCGTCGTCACCCCGGACGACGGCAGCGACGAGACGGCCTTCCCGATCTCGAAGCGTGCCAAGGTCCTGGTGCACGAGGGCGACCACGTGGAGGTCGGGCAGCCGCTGACCTTCGGTGCGACCAACCCGCACGACGTGCTGCGGATCCTCGGCCAGCGCGCCGTCCAGGTCCACCTGGTCGGCGAGGTCCAGAAGGTCTACAACTCGCAGGGTGTGTCGATCCACGACAAGCACATCGAGATCATCATCCGGCAGATGCTGCGCCGGGTGACGATCATCGAGTCCGGCGACGCGGAGCTGCTGCCGGGCGAGCTGGTGGAGCGGTCGAAGTTCGAGACCGAGAACCGTCGTGTGGTCACCGAGGGCGGTCACCCCGCCTCCGGCCGTCCGCAGCTGATGGGTATCACCAAGGCCTCGCTGGCCACCGAGTCGTGGCTGTCGGCGGCGTCCTTCCAGGAGACGACCCGGGTGCTCACCGACGCGGCGATCAACGCCAAGTCGGACTCCCTGATCGGCCTCAAGGAGAACGTCATCATCGGTAAGCTCATCCCGGCCGGTACGGGCCTCGCCCGCTACCGCAACATCCGGGTCGAGCCGACCGAGGAGGCCAAGGCCGCGATGTACTCGGCCGTCGGCTACGACGACATCGACTACTCGCCGTTCGGCTCCGGCTCCGGCCAGGCCGTTCCGCTGGAGGACTACGACTACGGTCCGTACAACCAGTGATTCGCCGCGGCGGCCCGGCCGAAGCCGGCTGAGCCACCGCGTCCGAAGTGAGTCGAAGGGCGGTCACCCCGTGCGGGGTGACCGCCCTTCGGGCTGTCCCGGCACTATCGCGGGGCCGGTCAGTGGCCGGTCAGCTGCCAGACCGCGAGGGCCAGGCCCGCGCTCGCGGTGAGCGCGGCGATGCTGGCGAGGGGCCAGCGGGCGCGCTCCAGGGAGTCCAGCCGGGACTCCATATCGGCCAGCTGCTTATCGGTCTGGTCGCTGCGCTGGACGAGCAGCGCGAGGGAGCCGTCGACCCGGGCGAAACCGGCTTCCAGGGTGCCGCGGAGCCGTTCCAGCTCCACGGCGACGCCGATACCGGCGCCCGGCGGGACATCGGGGTCAGTTCCGGCCATCGGCGGCGCCTTCCGGAGCGGGCCGGGAGTGGTGCCCGCCGAGCCAGGCGGGAAGCAGCCGTTGTACGGATTCGAGGGCCATGATCCTGGCCAGCGCGCCCGATACGGCCAGGGCGCCGGCCACCCAGGGAAGGGTGGCGGGCAGCCCGGACGCGTCGACGATCGCGGGCAGGGCCACGGCGATACCGACCGCGGACTGGAGGACCGTACGGGCGGTCCGCCGGGCGGCTTCGGACATTCCGCCTCCTTGAGGTGCGGGGGCCACCCACCGGGGGTGGCCCGGGTCTTACGGGTGTCTTGCCGGTTGGCTTCACCGGGAGGCTCTACCGGGTGCGGGGGACCTTCAGGGCATTCCACGAGGAGGGGCCGGGCCAGCCGTCGGCGTCGGCACCCCGGAATCCGAGCTTCCGTTGCCAGCGGGCGTACGACCGGCGGTCCGCCTCGCTCCAGCGGGGGCCGGGCCCGACCGTGTACTCCCCGCAGCCCTCGGCCACCAGCCGCCGCCCCATCGCCGTGATCACGGGGGAGCTCGGTGCGGCCTTGAAGAAGGCCGTACCGGGGAAGGGGTGGTGGCGGGGGCCGCCGGGCCGTGCGGGCTCGGCCGGGCCGGTGGGTTTCGACCCGAGGCGGCGGGCCACCCGAGCCCGCAGGCCGGGCATGGTGAAGCCGCGGGGGTCGATCTTCCGGTTGGTCCACTCCAGATGCCCGATCACGCTCTTCGCCGTCCAGCCGTGGGCCCGGCAGAGCGCGGCCGAGGCCCGTTCGATCGCGTCGAGCTGGGCGGCCGGCCAGGGGTCCTTGCCGTCGCCGAGGTTGACGCACTCGAAGCCGTAGAAATGGATGTTGCCGTCCACGGCGCCCGGGCTGCCCTGGTGTTCGTCCGGGGGCGGGGGGCGGGTGCCGTACTTCTCGTTCGCGACGGCCCGAAGGACGTCGGGGTCGCCGCCGCCGGCGTGGTTGGCGCGCCCGTTGCCGACCAGATGGACGCTGCCGTCCTTGGCGATCACGGCATGGCAGAGAGGGCCGGGCAGTGTGGCGTGGCCCCGGAAGCAGAGGTCGACCGAGGCTTCGGTGCCGGTGGAGACGGTGTGGTGCACCATCACTCCGTGCACCGGGCCGAAGGCGCCGGCGTGGTCGCGGTGGTTGCCGCGCCAGCCGGGGCGTTCGACGACGTCAAGGCCCTCGGCGCGCAGCGCGGCGACCAGGCGGTCCGCGGTCAGCGGGGTGGCCATGGGGTGTCCTTACGTACGGTACGGGCGGGAGCCGGGCCCGGCGTCGGGTTCGGCGGCCCGCGGTGGCGGGGGAGCGGGACAGGGCGAAGCGGCGGGCGGGAGCCGCAGCTCACCGCCGGGTGCGGCGACGGCCTGGTCCTCTGGCGCGGGTGGCGTTGCGGAGGCGGCGGTCATGACTGGCGGCCCTCCGCGTAGAGCACGCCCACGGCCGCCTTGCCGCTGCCCGCTGCGACGCGTCCTTCGACGTACAGACTGCTCCAGTCGTACGCGGCTCCGCCGTGCACGGCGGTCACCTCCTCGGTGAAGGCGGCGCCGGTCGCGGTGACGACCGGGCCGAGCTGGACCGTCGTCCCGTCGGCCGCCAGCAGGCGGACCCGGGCCTCGACGGTGGTGCCGGGGTCGGCCTGTACCCAGACCCCGACGGCGATCCGCGGGTGCTGGAGGTACATGCCGCCCTGGAGGACCCGGGTCCACTCCGCCGAGGTGACGGCGGTCGGCGCCGGATAGAGCGGGATCGGGATGTACGGGCGGGCCAGCCCGCCGCCGGAGGCGTCGTCGCCGAGGACGACGTTCCCGGCCCGGTCCCGGGCGCTCAGTGTCTGGCGGCCGTCCCCGGCGCCGTACACACCGAGGGCGAGGGTGCCGTCCTCGCGGCGGATGAGCACGCCCTGCTGCTGGCTGCCGTCCTGGTTGACGCCGATGGAGCCCAGCGCGGCCAGTTCGGCGTCGGTGGCGTCGCGGACGCTGATCCGGCCGGCGTCGGCGACGGTCAGCGGGTTGGTGACCAACGTCAGCGCGGGCCGGGTGCCCGCCGCCAGCGATACCCGGTCCAGCCGGCGCCGCAGTTCGTGGATCAGATCGATGAGATCTTCGGGGAGCATGGGCATCAGCGGCGCTCCAGAAAGAGTTCGGCGGTCTCGGGGCGCCCCCGCTGCGGCGGGGTGATCTTGATCCCGACCACCCGGAACCGCCCCTCGAAGCCGTCGGGATGCCATTCGTCGGTGATCCGCAGCCGGACCGTCCGGCCCAGCAGTCGCGGCGGCAGCGGGAGACGGTCGTCGAGGCGGACGGTGATCTCGGGGATGACGACGGTGCCCCGGGCCCGGCGGAGCAGCATCACGGCGTGCCGTACCAGTCGCCCGGGCCAGAGGACCTGCGGAAGATCGGCGCTGAGGTCGATCTGGGGCCAGCCCTCGGCGATCAGGTCACGGTCCACCATCACCGGCGAGACGATCTGCCGGGCTTCCTGGCTCGCGTTCCGCTCGATGGTGCCGCCCCGGACCCGGGCGTGGGTACCACCGCGGGTGGCGTCCCGGGGGAAGGAGTAGCCGAGGATCGAACCGGGCCGGTCGAGTACGAGGTCCTCCCCGCCCTGTTCCAGCTGGGGGGTGCCCAGCCGGAGCCGCTTCGTCCGTACCCCGGTGTCGGGGTTCCGGCTGACCTCGATGTACTGCTCGAAGCCGTTCTCGGAGTCGGCGATCTCCCGCAGCGCGTCGTCGACGACGATCTCGTCGGTGGCCCGCCAGGAGACCTCCAGCATCTGTCCCGACATCTCCTCGCCCACGACGACACCGATATCGCCGCCCTCGGAGTCCTGCATATAGGTCCACAGATCACGGGCGAAGGCGAGTTCGTCCTGCTCGCCGACGGAGACGAAGTCCCGGCGGATGCGCCGCCGGGCGGCGTAGGAGTCGAAGGTCGCGGCCTGGATCGTGAGGGACATCGCCCCCTTGTCGTCCGAGGTCAGCGTTGTCGTCCACAGGATCCCGCCCCACCACAGGTCCCCGCCGCGCTCCAGATAGACCGCGGTCCGGCCCTCCTGGAGGGCCTGGGCGCGGGCCGCCGTCGCGGCGTCGGGGATGGGGAGGGTGCCGGTGAGGGATCCCGTACGGCCGATGTAGTCGTCGACCTGGACGTCGCGCAGCGGGAGGGAGTCGAGGACCCGGTCGGTCCGCAGATCGCAGAACAGCACCCGGTAGGGGCTGACGGCCGTCACGCGGTGCCCGCCGCTTCGTAGGTGCCGCTGCCGACGATGTGGTCCTGGACCTTCCAGGCCCAGGGGTAGGCGGCGTCCACGATGCCGGCGCTCGTGGTCGCGCCGCCGCGGAGCTTGCCCGAGCTCATCTCGATCTCGAAGTAGGTGGTGCTGGTCAGCCGGATCCGGCCGATGGCGCGGTCCGCCGGGGTGGGGAGCTGGTCCTCGGCCTGGTGCAGCTCGAGGAAGCCGGCGCTGTGGGTGGCCCTGGCCGCGGGTACCGGCAGGCTGAAGCGCCAGTTGCCCGTACGGAAGTTGGTGGTGGTGCCGAAGACCATCCGGAAGTTGAAGTGGACGGTCGAGCCGTCCTGGACGTACCGGCAGTCCACGGTCGCGTTGCCGGGCGTCGGATTGGTACCGGTCGAAGCGGTCCACTGCGGCGTCCAGGCGCGCCAGGTCGACGGCAGCGGGTAGGGCTGCCAAGTGCCGGTCGTGGGGCCGCCGTTCCACCGCTCCAGACGGTCGCCGTTGTCGCGGTACTGGCCCTTGTACAGGCCGTCGAAGCCGCCGGTGGGCACGATGCCGCCGAGCGCCGCGGTCGGGTAGCGGCGGTTCTCGACCGTCCCCCAGTTGATCGAAGCGGCGTTCCGGCCGACCGTGACGACGAAGAGCGGGAGCGAGTTGGCCGGGGCGGACGGCGGCAGGGGATCGGTGACGGCGGTCGCCCCCTGGACCACCCTGATCACGGCCTGGGTGGCCCCCGAGGCGTCGTACGGGGCGTCCTCGACGGTCAGGTAGATCAGGTCCTTGCGGCTGCCGTCCGCGCTGCCCGGCGCGAGGGTGACGATCTCCGGATCGGTGACGGCGATCATGTACGCACCCTGGCGGGCCGACGTCTGGATGACGGCCCGGCCCGTCATGATCCGGCACTGGAGGGCATTGACCCCTTCCAGTTCGAGCCCGCCGGGGATGACTCCGCCGCGGGAGGAGAGCGATCCGGTGGGGGTCAGTACGAGGGAGGTGGCGAGGCGGGTGTCCTCCTGGGTCTGGCCGGTGGGGGCGTGCCAAACGGTGCGAATGGTCATGAGGTGCTCCTCTGCGGGTCGTGGTGGTCGGTGCGATGGGCCGCGGGGGTCACCATTCGGCGCTGCGCCAGCGCACGGCGAGGGTCGCGGCCTCGGTCGATGAACGCGGCCGGTAGGTCACCTCGTTGGTGCCGGGCTCCAGCGTGAACAGCTCCTCGGGGCTGCTGTCGGCCGCGGCGGTGTGGCGCCGGGACGCGGTGTCGTTGAGGGTCACGGCACCGCTGGAGGTGTCGACGGTCAGGACGTCGTCGACGCCCAGGTTGAGGCGGTAGTGCAGCTTCCGGCCGGTCCTGCGGTTGGTGATCACGGGGTCGGAGCAGGGGCCCCGCAGGGTGATGACGGGGTGGCTGGGCGCGCTGCCGTCGTTGACGACCGTGAGATCCCCGGTGACGGACGCCGCGCCCCAGGCGAGGGGCCAGGTCAGCGGCCAGCCCAGGCCCGTCACCGGCTGGGGCGCCCCGGTGGTCAGGGAGCGGGCCTCGACGGTGTAGCGGCGGGGGTCGGTGGCCACCCACTGGACGGTGACCCGGCCGACGCCCTGGGAGAGCAGATTGCGGTCGGCGGGCAGCACGCGCTGGCTGATCCTGGCCCGTACGGCGAGGGTCTCGCCGTGGATCCGTACCGCCAGCCACTGCTCGGTGTGGCGGAGCCCGAAGGCGCGGCGCAGGGTGCGCAGGGTGTCGACCGGGTCGGTGCCGGGTGCGGGCAGCAGCCAGATCTGGCCGCCGACGCGGCGGGGGCGGGCGTACTGCGTGCCGGGCCAGGAGCCGTGGGTGGTGGGGCGGTCGGCGTCGGTGGTGTCGGCGTCCGGGAGATCCTCCCAGCCGGTCAGTCCCTGGCGGTCGATCTCGTACGGGGTGCCGGGGCCGAGCAGTAGATCGCCCCACTGGATCTGCCCGTCGAGGCTGATCAGTGAGGCGGGGGCGGAGTCGGTGCCGGTATCGGGGTTGAGGGGCGGGGCGGGTGTGGCCATGGGGCCGTCACCTCCGGTGCGAAGTCTGTGGGCGGCGCGGGGTGTGGCACGGCCGGCGCCGGGGGTTGCCCGTAAGGCGGGACGGGGCGGGGGCTACGCGGCGCGGGCGAGGAACAGCAGTTCGTCGGCGATCTCGTACGCACCGGCGCCGGCCGGCTCATGGAAGGTCTCCACGCGGCGGGGCCGCCGTACTCCCCGCCTGTCGCGGCCGTTCGGTTCCGCCGCCCGCAGTCCGGCGACATCGCCGAGCGGCGTGATGGAGCCGGGGAGGGCGCCGTGCGGCGGGCTGACCAGGCCGCCTTCGGCGAGAAAGCTGGTGATCTTCTTACCGATGGCCTTGGGGTCGAAGAGCTTCTTGAAGTCGATGTTCTCCCAGGCGTCGATCAGCCATTCGACGAACTTGGCCGGGGTCTGGAGGATTCCGCCGATGGTTCCCAGGCCGTTGCCGACCGCGTCGGCGATGCCCTTCAAGGTGTTGACCGTGGCGTTCTTCACCTTGTCGAATTCCGGCGGGATCTTGTCGTTCACCCAGGTGGCGATCGGTTTGACGACGGCCTTGATGCCGTCCCAGGGGTCCTTGAACAGCTTGATGAGGCCGCTGGTCGCCGTCCCGATACCGTCGCGGGCGGCGGCGAAGCCGTTCTTGACGTCGGTCCCGATGGAGTTGACCGGGTCCACGATCCGCTTGCGGACGAATTCGATTCCGTCGGCGACCGCGGCCCGGGCCTTGCTGATGATCGGGAGGACGTTCTTCTTGATCCACTCGAAGCCCTCGCGGAGCTTGTCGAAGCCCTTTTTGACGAGACGCTGTCCCGCTTCCGAGTTGAGGGCGAAGTCGATGATCAGGTCGATGATGATGACGACGGCGATGGCCGCGCCGCCGAATGGATTGGACTGCATGGCGACGGAGATCCCGACCATGGCGACGGCGCCCGCGGCCAGCCCGACACCGAGCCCGGTGAGCAGGGGGGACATCACACTCATGACCGAGCCGAGCGGATCGACGATCTTTCCGAAGCCGCCGCCGCTGTCGGCCAGGCGCTTCGCCGCCCGGCCGGACGACTTGGATCTCTCACGGCTGTTCTTGAGCTGATCGGCCGCGATGCCGGAGTTCCGGCCGACGGCCTTGACCGGGGCGATGGAGGGAGTGGCCCGGGACTTGAGATCGGCCACCGCCGTCCCCGCGTTCCGGGCCGCGGTCCAGACCTTGTCGGCCGCGCCCTTGACCCCGCCGATGCGCTGGACGGCGGTCCGGACCGCGCCGACGGACTGGTTGTGCCAGTTCCGCAGGGTGCTCATCGGCGCGTTGACCCCGGCGAGCGGGTCGCGGGCACGGGAGGCGGCGATCGCGCTCATCCGCGGGCCTTCGCCAGGAACATCAGCGCCTTCGCCGTCGACCGCGGGTCACTGGTGGGCGCCGCGTGGTAGTGCTCGATATAGAACCCGGCCCCTGCGGTTCCTGCCTGGGTGCGGGCGTTCAGCGCGGTGTGCCGCAGCAGCCGGTTCAGCTTGGACAGCGGCAGTACGGCTTCGGCCTCACCGGCCTCGGCGATGATCGCCGGTACGCCGCCGGCCCGGGGCGCCACCACACCGCCCTCGGCCAGCCTGGGGATCCTGGGAATGTCCGGGATTCCCTTGCCGCCGATGCCGGGAACCCAGTCGGGGACCTTGAAGTCAAAGGAATTGACCTTGCTGATGGCGCTGTTGATGATGCCGATGACATCGTTGATCGGGCCCTTGACCGCGTCCTTGATCTTGCCGAAGGTCTTGCTCGCGGTGTCTTTGAGGCCTCCCCACTTCTTCCCCAGCTCGTCTTTGACGTGCTTGAAGACCTTGGGGACCTTCTCGATGAAGTCGGCGACGGGCTTGATATGCCCCTGGATCTTGTCCCAGATCTCCTTGACCTTGTCCCGGGCCGTCTTGAGGGGGTCCTCGATGCGCTTCTTGACGTTCTCGAAGCCGTCCTTGACGGATTTCCTGATCTTTCCGACGATGTCCGAGACCTTTTCCCGGGCCTTGTCGAATGTCTCCTTGATGCGTTTGCCGAAGTCCTTGATGATCGGACCGACTTTTTTCCACACATCGTCGATGACCTTCTTGACTGCTTCGAAGGCCTTCTTGAGGATCTTCCGCATGCCCTCCGACTCGGTCGCCATCTGGACGACCTTCTCGATGAGCGGCATAAAGAGTTCCAGCAGGCGGGTGAAGATATTGCCCTTCATGGACTTGTTGAGCCCGTCCATGCCCTTCTTGGCGTTGTCCGCCCCGCCCTTGAACTTGCCGATGTTGGTGCCGCCGGTCTGACCCGACTTCCCGGCCTTGGCGACGGACTTCTCGGCGCTGTCGGCCCGGTCCTTGAGGGTCTTCAGCTCCGAAGCGGCGTTCTTGGCGGCGTCCCGGAGCTTCTTGACCCCGCCTTCGCTGTTCTGCGCACCGGTTTTGAGGTTTCCGGCGGCGCGGTTGGCGTCGTCGGACTTCGTCTTGAAGTCCTTGAGGGAGTTGTTGGCGCTGTTGAGCGCCTTGACCAGAGACAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP042266|4709802:4725488|4717413_4717689_-|WP_146481803.1|DBSCAN-SWA
MAGTDPDVPPGAGIGVAVELERLRGTLEAGFARVDGSLALLVQRSDQTDKQLADMESRLDSLERARWPLASIAALTASAGLALAVWQLTGH
>NZ_CP042266|4709802:4725488|4724306_4725488_-|WP_146481811.1|tail|DBSCAN-SWA
MSLVKALNSANNSLKDFKTKSDDANRAAGNLKTGAQNSEGGVKKLRDAAKNAASELKTLKDRADSAEKSVAKAGKSGQTGGTNIGKFKGGADNAKKGMDGLNKSMKGNIFTRLLELFMPLIEKVVQMATESEGMRKILKKAFEAVKKVIDDVWKKVGPIIKDFGKRIKETFDKAREKVSDIVGKIRKSVKDGFENVKKRIEDPLKTARDKVKEIWDKIQGHIKPVADFIEKVPKVFKHVKDELGKKWGGLKDTASKTFGKIKDAVKGPINDVIGIINSAISKVNSFDFKVPDWVPGIGGKGIPDIPRIPRLAEGGVVAPRAGGVPAIIAEAGEAEAVLPLSKLNRLLRHTALNARTQAGTAGAGFYIEHYHAAPTSDPRSTAKALMFLAKARG
>NZ_CP042266|4709802:4725488|4723047_4724310_-|WP_146481810.1|DBSCAN-SWA
MSAIAASRARDPLAGVNAPMSTLRNWHNQSVGAVRTAVQRIGGVKGAADKVWTAARNAGTAVADLKSRATPSIAPVKAVGRNSGIAADQLKNSRERSKSSGRAAKRLADSGGGFGKIVDPLGSVMSVMSPLLTGLGVGLAAGAVAMVGISVAMQSNPFGGAAIAVVIIIDLIIDFALNSEAGQRLVKKGFDKLREGFEWIKKNVLPIISKARAAVADGIEFVRKRIVDPVNSIGTDVKNGFAAARDGIGTATSGLIKLFKDPWDGIKAVVKPIATWVNDKIPPEFDKVKNATVNTLKGIADAVGNGLGTIGGILQTPAKFVEWLIDAWENIDFKKLFDPKAIGKKITSFLAEGGLVSPPHGALPGSITPLGDVAGLRAAEPNGRDRRGVRRPRRVETFHEPAGAGAYEIADELLFLARAA
>NZ_CP042266|4709802:4725488|4709802_4713285_+|WP_146481801.1|DBSCAN-SWA
MAASRNASTANTNHGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNAAWKARVEAALDSGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDFTYAAPLFVTAEFTNNETGEIKSQTVFMGDFPLMTHKGTFVINGTERVVVSQLVRSPGVYFDSNIDKTSDKDIFTAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILQEFGEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVGRYKVNKKLGADEPLNAGVLTTDDVIATIKYLVKLHAGEVETIGENGSEIVVETDDIDHFGNRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIGLIGSLASYGRVNAFGFVETPYRKVTDGQVTDEVDYLTADEEDRFVIAQANATLTDELRFAEARVLVRRRGGEVDYVPPTEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQAVPLITAEAPLVGTGMEYRCAVDAGDVIKAEKDGVVQEVSADYITVGNDDGTYTTYRVAKFSRSNQGTSVNQKVIVAEGDRVVESQVLADGPATENGEMALGKNLLVAFMPWEGHNYEDAIILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGAEVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFDREEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVDIILNPLGVPSRMNPGQVLEIHLGWLASQGWKVEGNEEWMERLKAIGADDVRPGTNVATPVFDGAREDEIAGLFESTIPNRDGDRMVLPSGKARMFDGRSGEPFPDPISVGYMYILKLHHLVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDVTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVFRAAEELGIDLSRREPSSVEEV
>NZ_CP042266|4709802:4725488|4717675_4717927_-|WP_146481804.1|DBSCAN-SWA
MSEAARRTARTVLQSAVGIAVALPAIVDASGLPATLPWVAGALAVSGALARIMALESVQRLLPAWLGGHHSRPAPEGAADGRN
>NZ_CP042266|4709802:4725488|4718012_4718921_-|WP_146481805.1|DBSCAN-SWA
MATPLTADRLVAALRAEGLDVVERPGWRGNHRDHAGAFGPVHGVMVHHTVSTGTEASVDLCFRGHATLPGPLCHAVIAKDGSVHLVGNGRANHAGGGDPDVLRAVANEKYGTRPPPPDEHQGSPGAVDGNIHFYGFECVNLGDGKDPWPAAQLDAIERASAALCRAHGWTAKSVIGHLEWTNRKIDPRGFTMPGLRARVARRLGSKPTGPAEPARPGGPRHHPFPGTAFFKAAPSSPVITAMGRRLVAEGCGEYTVGPGPRWSEADRRSYARWQRKLGFRGADADGWPGPSSWNALKVPRTR
>NZ_CP042266|4709802:4725488|4722030_4722954_-|WP_146481809.1|tail|DBSCAN-SWA
MATPAPPLNPDTGTDSAPASLISLDGQIQWGDLLLGPGTPYEIDRQGLTGWEDLPDADTTDADRPTTHGSWPGTQYARPRRVGGQIWLLPAPGTDPVDTLRTLRRAFGLRHTEQWLAVRIHGETLAVRARISQRVLPADRNLLSQGVGRVTVQWVATDPRRYTVEARSLTTGAPQPVTGLGWPLTWPLAWGAASVTGDLTVVNDGSAPSHPVITLRGPCSDPVITNRRTGRKLHYRLNLGVDDVLTVDTSSGAVTLNDTASRRHTAAADSSPEELFTLEPGTNEVTYRPRSSTEAATLAVRWRSAEW
>NZ_CP042266|4709802:4725488|4720913_4721981_-|WP_146481808.1|DBSCAN-SWA
MTIRTVWHAPTGQTQEDTRLATSLVLTPTGSLSSRGGVIPGGLELEGVNALQCRIMTGRAVIQTSARQGAYMIAVTDPEIVTLAPGSADGSRKDLIYLTVEDAPYDASGATQAVIRVVQGATAVTDPLPPSAPANSLPLFVVTVGRNAASINWGTVENRRYPTAALGGIVPTGGFDGLYKGQYRDNGDRLERWNGGPTTGTWQPYPLPSTWRAWTPQWTASTGTNPTPGNATVDCRYVQDGSTVHFNFRMVFGTTTNFRTGNWRFSLPVPAARATHSAGFLELHQAEDQLPTPADRAIGRIRLTSTTYFEIEMSSGKLRGGATTSAGIVDAAYPWAWKVQDHIVGSGTYEAAGTA
>NZ_CP042266|4709802:4725488|4719807_4720917_-|WP_146481807.1|DBSCAN-SWA
MTAVSPYRVLFCDLRTDRVLDSLPLRDVQVDDYIGRTGSLTGTLPIPDAATAARAQALQEGRTAVYLERGGDLWWGGILWTTTLTSDDKGAMSLTIQAATFDSYAARRRIRRDFVSVGEQDELAFARDLWTYMQDSEGGDIGVVVGEEMSGQMLEVSWRATDEIVVDDALREIADSENGFEQYIEVSRNPDTGVRTKRLRLGTPQLEQGGEDLVLDRPGSILGYSFPRDATRGGTHARVRGGTIERNASQEARQIVSPVMVDRDLIAEGWPQIDLSADLPQVLWPGRLVRHAVMLLRRARGTVVIPEITVRLDDRLPLPPRLLGRTVRLRITDEWHPDGFEGRFRVVGIKITPPQRGRPETAELFLERR
>NZ_CP042266|4709802:4725488|4713385_4717294_+|WP_146481802.1|DBSCAN-SWA
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLEKVIYFAAYMITFVDDERRTRDLPSLEAHVSVERQQIENRRDADLEARAKKLETDLGELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWSRFKNLKVQDLEGDELLYRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVSAFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGRTVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQMAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEEREVRGEGRSFGSTAEAIMAFDARELSLQAKVDIRFPVGTIPPRGWTPPADEDHEGYGTSWQQGDSFRLKTTLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFYWATRSGVTVAVSDIVVPEAKKEIVASYEAKDERIQKQYERGLITKQERTNELIDNWTRATNEVADAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLRIADRGADGVLRKTDNVETSVYARMLAEDVVIDGRVIAPANVDLGDVLIDALVGAGVEEVKTRSVLTCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTKKLVVTPDDGSDETAFPISKRAKVLVHEGDHVEVGQPLTFGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEIIIRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLARYRNIRVEPTEEAKAAMYSAVGYDDIDYSPFGSGSGQAVPLEDYDYGPYNQ
>NZ_CP042266|4709802:4725488|4719091_4719808_-|WP_146481806.1|DBSCAN-SWA
MPMLPEDLIDLIHELRRRLDRVSLAAGTRPALTLVTNPLTVADAGRISVRDATDAELAALGSIGVNQDGSQQQGVLIRREDGTLALGVYGAGDGRQTLSARDRAGNVVLGDDASGGGLARPYIPIPLYPAPTAVTSAEWTRVLQGGMYLQHPRIAVGVWVQADPGTTVEARVRLLAADGTTVQLGPVVTATGAAFTEEVTAVHGGAAYDWSSLYVEGRVAAGSGKAAVGVLYAEGRQS

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_146481801.1|4709802_4713285_+	DNA-directed RNA polymerase subunit beta	G8DH04	Emiliania_huxleyi_virus	4.0e-30	22.5
WP_146481802.1|4713385_4717294_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	3.1e-55	27.6
WP_146481803.1|4717413_4717689_-	hypothetical protein	A0A1J0MCA5	Streptomyces_phage	2.0e-25	78.5
WP_146481804.1|4717675_4717927_-	hypothetical protein	A0A142K647	Streptomyces_phage	2.1e-18	72.7
WP_146481805.1|4718012_4718921_-	N-acetylmuramoyl-L-alanine amidase	A0A2P1N078	Streptomyces_phage	1.3e-105	61.6
WP_146481806.1|4719091_4719808_-	hypothetical protein	NA	NA	NA	NA
WP_146481807.1|4719807_4720917_-	hypothetical protein	A0A1J0MCX4	Streptomyces_phage	1.4e-82	45.7
WP_146481808.1|4720913_4721981_-	hypothetical protein	A0A2H5BLD9	Streptomyces_phage	4.1e-34	41.1
WP_146481809.1|4722030_4722954_-|tail	phage tail protein	K4I041	Streptomyces_phage	5.3e-46	39.7
WP_146481810.1|4723047_4724310_-	hypothetical protein	NA	NA	NA	NA
WP_146481811.1|4724306_4725488_-|tail	phage tail protein	Q8SBP1	Clostridium_phage	2.6e-05	44.3

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP042266|6498137:6513417|DBSCAN-SWA
TATGGGGGCACACATCATGGGGATGACCAGCATGAATGCACCGGTAGCGCCGGTAACGGCCTACGACGGGTGCGGCATGTGCCTGCTCGGTCTGCGACGGCTCTCACGGGTCAAGGGGGCGACCAGCTCGCCGGAACGGCAGGAAGCGTTGGTCCTGTCTGCGGCTGAAGCAGTAGGCGGGCACATCATCGCGTGGGCCGATGACTGGGAGGTATCCGGCGCCACGGACCCGCTGACCCGTCCGGGGCTCGGCCCGTGGCTCCGGGGAGAGAAAGGTCCGTATGACGGTCTCGCCGGATCGGCAGTCGACCGCATCGGTCGCAACGTGGTGGACGTCCTCTCAACGGCGTACGCCAACCACAGTGCAGGCCGTGCTCTGGTTACCGCCGACCACAACGGCATCTGGGACCTGAACGACTCCAATCAAGAGAACGAACTCACGCTCAAAGCCATGGGCGCGCAGATGGAGCACCGGGCGATCAGGGAACGCAACCGTCAGGAACTCCGGCGGGCACGCGCGGTAGGGCAGATCAGTAGCCGCCCGTCATACGGCTACCGGAACGTGCGCCCCGCGCCCACCCAGAAGGTCACTCACCGGGAGTTGGAAGAGCACTCCGCCGAAGTGCTGCGCGATGTGGCCCGGCGGATCCTGCTGGACACGACCGACAAGACCACCCCCTACAGCGAAGCGGCACGCCTCACGCTCGCAGGCGAGTTGGCTCCCGTGGACTGGCTCGCCAACCAGTACGGGCGGGAACCAAAGGGCATAGCATGGGGCGGAAAGTCCCTGCACGACATGTTGGTGAGCGAAGCAGCGCTCGGCTATCTCATGCACCAGGGGCGCCCTGTGCTCGACAAGAGCGGCAAGCCGTACCGGGTCGGGCCCCCACTGTGGGACCGGGCCACCCACATTGCGTTGAAGGCCAAGCTTGCAGCCTCGCCGAAACGTACGATGAAGTCCCGGACGCCGAGGGCTCCGCAGCAGAAGACGCGCCTGAGCGGTGGTATCGCCACGTGTGGCAACTGCGGAGAGAACATGTACCGCAACGGCACCACGAGCAAGGGCAAGTATCCCGCGTACCGGTGCACCGCCCGCAATCGGGGAATCCCCGGCTCCCAGCACTGCGGACGCAAGCTCGGAGCCCCGAAAGCCCCGGGTACCTTCGCTTCCCCGATCATCGCCCGGGCCGAGCTGGATAGCATCGTGGAACGCTGGTTCCTGGACCGGTTTGGGACCGCTCTACTCATGAAGTCGGTGTACGACCCGGGCTCCGGGCACGCCGCAGCGATTGCCGAGCTAGAAGCGGCGCGGGCACGGCTCCGGGACGACCGTCAAGCGGGCATCTACGACAGTCCTGATGATGCCGAGTGGTTCCGTACCCGCTTCGCTGACATCGGCCGTGAGATTGCCGAGCTGAAGAAACTTCCGGACCGTCCCGCAGGCTGGACCAGCGTCCCCACCGGGAAAACGGTCACCGACGAGTGGCACGCGACCACCACCGAGGCGGCCAAACGGGAGATGCTCGAAGCGCACGGCATACAGGTGGTGGTCTACCCCACGGAACGAAACATGGGCCGTGTCGTCATCACCAGCACCATCCCCCATGATCCCGTCGCCGAGGCCACCGACACCGAGGGCAACCCCGGGCACCCCGCCATGCGAGGAGACAGGGGCAGTCACATGCGCATCGCGGAACCCGTACTGGCCGCGTAGGACACGCGCTCGCTCGGTACGCTCACCGGTAGCCCGCGCCGGAATGGAGGCACGGAGTTAGGCACGGTCCCCAGCGATGGGGCGCAGTACGGCCGTAGCCGCATGACTGGCCCCCGATGGTCCCCCGTGACCCTCGGGGGCTTTGTCATGCCCGCACACGGGCGTACGGGGTTCGTCACGTGCCACTCGCCGACTCGCCCGGTCCGGGGCTCCGCAGCGAGGCAAATCGGCGGGCCGATGGCTGATGAGATGACGTTTTGATACTTGGTTTTGATTGCACATAAAAAAATAGAGAGAAACCAAGAACCACCCTCCGTCTGTCATGTCGCCATGAACGGCCCCGGGGTGCGGGTCATCGTCGGTCCTTACTACCGGGGCAACCGAGACCGGGATTACCGCACACCCGCCCCGCAGAGGGGAACACGGTGGTCTGAGTGCCCGGGTCTCACACGTAGCTCTGTCCGTGCAGCACGCACCCTCACGGGTGGCCGCAGTGGTCGTGTGGCAGAGCGCGGGGACTGCACCGCTCAACGATGTGCAGTCCCCTTGCCGTTCCGGACCGGTCGAGCCGGCGAGGGCGACACCGAGCCCGCTAACCCAACGGCTAGAGGTGCGCCGTAACCAACCGGCAGAGTTCCCCGGTTCAAGTCCGGGGGCGGGCACGACAACACAACAGAGGGGGGCGCACATGCGCTGTATCGACTGTCCGGCTAACGCGACCCATCGGGGCCGCTGCGAGGACCACCACCGCGCGTACGAGAACAGGGCTCCGGTCCGGTCCCGCCGATCGCGAGGGCGCCGGAGAGCGAAGCGGTACGAGGGTGCCGCAAGGTTGCGTGCCCTGGTCGACGCTCGCGGGTCCGGTTGGTGTGCGTGGTGTCTGGAGTCCTTCCCTGCGGAAGGGCTTGAGATCGACCACGTGTGCCCGTTGGCCATGGGGGGCGAGGACATCGACAGAAACGTTCACGCGCTCTGTACGGGCTGCCACGGGCTCAAAACCCGGACCGAGTTCGGGGGTGCCCGTGTCGACGCTTGAGGCGTACGAACAGGCCGTAGCCGAGGGGCTTGGCAGTTGGTTGCCGGACGGGGTCACCCTCGCCGAGTGGCAGCGTCTGTACCGGCCCGTGGTGTGGGTTGACGAGGTCCACGTTCACCGCGCCACCGATGCGGACCGGCTACGGGCGGTGTGCGCTGTCCTCGCGGCTGCTGCGCTGCCCGACACGGTGTGGACCACCAGCACGGTTGATACCCCCCGCCCTGGTCCTGGTGCCCCTGGTGCCACGTAGGCCCCGCCGCCCCTGTACCGCCCCCGGGTGCCCTGAACTGACCCCCCGTGGTGGCCGCTGCCCCAAGCACCAGAAGGAAGCAGACAGAGCGCGTGAGGCTGGTGGACGGACGTACGACACGCGTTGGCAGCGCGTCCGGCGCGCGTATCTCTACGCGAACCCGTGGTGTGTCCTTTGCTCCGCCCTGGCGAACGTTGCCGACCATCACCCGGTGAGCCGGCGAGAGCTGATCGCCCGGGGCGAGCCGAACCCGGACGCGTGGAAGCACATGAGGCCCGTGTGCGCCTCGTGCCACAACGCCGAGACCGCGCAGCGCCAACCGGGCGGGTTCGCCGCTGAGCGGCGCTCAGAGCGCGAGGCGAACGACCGTCCGCCGTTCTGACGCGGTGGCCCCCGGGCGGGGTCCCCCTGCCCCTCTGACGCCAGATCGGCAGGGAGGCAAAAAAATCGCATGGCTCATTGGGCCGTTCCTGTGGAGGTGATCAGCCATGGCCGTTCCCGGTCAGAAGCCCAAACCCCATATCCAAGCGGTCCGCGAGGGCACGTTCCGCCCGGACCGCAATTCCGAGGGTGCGCGGTTCGCCCCGCTGGAACCGATCGAACCCGACTGGACAGAACTATTGCCCGGTGACGCGTCCGAGGACGTGCGGGGGAAAGCCGCGGACGTATGGGCGAGAACCGTTCCCGCCCTGGTCGCTTCCGCTGGTCTCACTGACTCGCAGCGAGAGACCGTCATTGAGTATTGCCTGACAGTCGCTCGCCTTTGGCAGGCAGAGCGGGAGCTATCCCGTACCGGCCTGGTGGTCGAAACGGAGCGCGGGAACGTGAAATCGCCATGGGTGACGATCGCCCACCAGTACCGGACCCATTTCCGGTCGCTGGTGGGAGAGCTGGGGCTTTCGCCCGCAGCAGCGACCCGGATTACCCCGCCTGACTTTGGTGGGGACGACGATGACGACGTGTTCGACTGACGATCTGCCGGTCCCGCTCGATGCGCTGCGGGCCCTCGGACTCTCCGAGGATGACATCTCCGCTGCGTGCCGCTCTCGGCCCCTGGTGGTCGCTGCGCAAGCGAAGGATGCACCCGGGGCCTATTTCGATGTGGCTGCCGCCCGGCGCGCTGTACGGGCAATCCAGAAGTTCAAGCACACGAAAGGCCGTTGGGGCCGCTCGCGTTTGAAGCTGGACCCCTGGCAAGTCGTATGGGTCGTGGCCCCCATCTTCGGTTGGCTCGCTTACGACCCGGAGCTAGGCCGTGCGGTCCGAGTGATTCGGTCCGCGTGGATTGAAGTCCCGCGGAAGAACGGCAAGAGCACGCTTAGCTCAGGCATTGGCCTGGTGCTGCTGCTCGCCGATCGGGAGATCGGGGCGGAAGTCTACGCGGCAGCCGGCTCGCTCCCTCAGGCTGAGCGGGTCTTTGACGACGCTAAGCGAATGGCGCTCACCTCTAGGCTTGTCCGGGGGCGGGTTGAGGTTCTGCGCGGGCTCATTCGGGTGCCGAGGACCGGGGGCATTTTCCGGGCCCTTTCCAAAATCGCCGAGACCGCGCACGGACTAAACGTCAGCGGGGCAATCGTTGACGAAGTCCACGTGCACAAACGGCGTGATCTCATTGACGCCATCGAGACCGGTACCGGTGCCCGTGATCAGCCGCTGATCATCTTCATTACGACAGCTGATGAGGGTACCGAGGGCAGCATTTACGATGAGAAACACACGTACACCCGCCGTTGCGCCGAGGACATTGTCAGCGACCCCGCACACTACGGGGTTATATGGGCCGCCGACGAGAAAGACGACCCGTACGCCGAGAGCACGTGGCGGAAAGCCAATCCGGGCCTTGGGGTGTCACCCTCGCTCGCCTACATGCGCCGTGAGGCGAACAAGGCTAAGTCGACTCCGAGTTACTTCGCGACGTTCTGTCGACTCTCGCTGAATCGGAGGATGCGGAGCGCTTCCCGGTGGCTGCCGATCTCCCTTTGGGATGAAGGCAAAGGCCCCGTGGACGACAAGACATTTCGCTATCGGCGCGCTTGGGGCGGGGTCGACCTTTCCGCGGTGAGCGATCTTTCCGCATGGGTCCTCGCTGTTGAGTCCCGGGTGCCCGGAGTCGAGCTAGAGCTAGTCGCGCGCTTTTGGCTGCCGGAAGAAAGAGCCGACGAACTAGAGCAGCAACTACAGGTACCGATCAGGCAATGGGCTGCCGATGGTCTGCTCACGCTGACCGAGGGCGACGCGATCGACTATGACGCCATTGAGCGGCAGATCGTTGAGGACTGTCGGCGGCTCGATGTGCAGCGGATCAGCTATGACCGCATGTTTGCCGGGCAACTGGTCCAGCGGATAGAGAAGAAAACCCGCGGTGTCGATGTGGTCCCGGTGGCGCAGACCTACTTGGGCATGTCGCCCGGGTGCAAGGAACTTGAACGTCTGCTGCGCGAGGGCCGAATACGTCACGGTGGCCAACCGGTACTCCGCTGGAATGCTTCGGTCGTTGAGGTCTACCGCGACGGCAACGACAACATGAGGCCCATCAAAACGGACCGCGATAAATCAAGTGCCCGTATTGACGGGGTTGTTGCCGCGGTGATGGCTCTTGACGGCTATGTGCGTCGCCCGCTGAAACGGCCTCGCGCTGCGAGTGCATAGAACCAAAGGGGGGATGCATGGCCGAGACACCGCTACAGATGACGATCCGGCTGTACCGGAAGCTCAAACGCCGAGGTCACAAGGTCCGTACGTGGTCGGATTACTTCGAGGGTAAACACCCGCTGCTGTTCGCATCGCCGGAATTCAGCACGCAGACCGGTGACCTTTTCGACGGGTTCTCTGACAATTGGTGCCGCACGATTGTGCACGCGACTGCCGAGCGCTTGCGGCCCCTCGCGTTCCGGTTGGCAGACGGGTCGATTGACAAGGCTGCCGGGCGGGCATGGAAGCGGTCCGGCTGCCACGTTGAGGCAAATCTAGCGCTGTTGGAAGCGCTGATCTCCGGTCGCTCTTACGCGCTGGTGTGGAAACCTGATGGGGTTCATACCGAGATCACCTTTGAGAAGTCGACTACGGCCATTGTCGAGTATGTTCCGGGCCGTCGCCGGCTCCGGGCAGCGGGGTTGAAGGTCTGGACAGATCATGATCTAGAGTTCGCCACGCTCTTTACTCCGACGATGGTCTACCGGTGGCAGCGTCCTCGGCGTGACGGTGGTCAGTGGACCGGCCGCACCGCGGGACTTTCCCGGGGTCAGCCGAGCCATATTCCGAACCCACTGCGGGTGGTCCCGCTGGTGGAACTGCCGAACCTTGTCAGGCTCGGAGCCTCGCCCGTATCGGAGTTGGCTCCGGTCATTCCGCTTCAGAATTCGATCAATGCGCTTTGGGTTCATGCGATGACCGCATCCGATGAACGGGCACTTCCTGCCCGGGTGGTCCTCGGAATGGACCGGCCGGTAAGGGAGATCATCGACCCGGACACGGGCGAAGTGGTGGGCGAAGAGGATGAACCGCTCGCGAAATTCCGTTCCGATCGGCTGCTGTGGCTAGAGCGCCAGGGCGCGAGCATCGCCGAATTCTCTGCCGCTGATCTCCGGGGATTCCTTGACCTGATCACTCAGGCAGTCGAGCACGTTGCAGCGCAGACCCGCACACCCGCTATCTACCTGAACAAAAAGCTGATCAACATCCCGGAGAGCGCCGTATCGGCCGATGAATCCGGCCTGGTCGCCAAGGCATATGAGAAACAGGACCACTTCGGCGCAGGGCTACAGGAAGTCATGCGCTTGGAAGCTCTCGCTGCCGGTGAACCGGACCGTGCGGAGTCGCTTTCCATGGGGTCCGTGGTGTGGCGTGACCCGCACTTCCGGACAGAGGTTCAGTACGCCGATTCCCTGGTCAAGTTGAAGGGTATCGGGGTCCCGGATGAAGCCCTTTGGGAGCGCATCCCCGGTGTCACGCATGACGAGATCGAACGGTGGAAGCGGATGCGCACCGACCAGGCAGCGGCAATCCTCGGTGGTGATCTCGCAGCGCTGTACGGTCCTAAACCGACCGAGGGTGAGCAGGGGTCTGCGGAGCCCGTTCCGGAAGTCGCGTAATGGCCGACTCCGGGGCCCTCGCCCTCGCTCGCTACATGGAAGTGCAGGGAATCGCTCGGGGCGTTCTAGAGGCGATACAGGCCCTTTGGCGAGACGTGACTCCGGACCGGATTCTCTCTGCGATGCAGGGTGAGACCGGTCGTCAGATTCTCGCTGCGGTGACCGCCGGGCAAATGACTGCCGCTGCGGGTGCGCAGGCATTCGTCACGGGTGCGATGTTGGCACAGGGTGCGGCAGCCGGCCCGGTTGGGATGCTCGCCCCGGAACGGCTCGCGGGTATCGCTGCGGATGGTCGGACTCTCGCAACACTGCTGTATCTTCCGGCGATTCGGACCGCTCAGGCTCTTGCCCTCGGCGCGGCTCCGGAGGTCGCTTCGCTCGCGGGTCTGAACCAGATGGCCACGATGGTCTCAACAACGATCACGGACACCGCTCGTACGGCTACGTCCGTCGCCATGGCTGCCGAGCCACGATGCCGTTTCTACGTACGCGTCGTCCGGCTTCCCGCGTGCGCCCGGTGCATCATCCTCGCCGGACAGACCTACAGCTACAGCGAAGGTTTTAAACGGCATCCCCGGTGTGATTGCGGTGTGGAGCCGATGACCGACCGGGAATGGAAAGCGAGCAAGGGTCCGGAAGACCTGATACGGGAGATGACCCCAGAAGAGCAACACAAAAGGCTCGGAGCCGCAGGGGTTAAAGCCCTAGAGGCGGGGGCCGATCTAGGGCAGATCGTCAATGCCCGCCGAGGAATGGCGACCGCCCAAACAAGTGGAGGTCCGGTCCGGGTCACGACCGAGGGCACTACGAAACGGGGCATCGGCGTCAAGGCCATGGGGAGCGAGTTTCAGAAGGTTCCGACCAGCCGGTACATGCGGACCGTGGAAGCTCGGCAGATGCCGGAAACCATTTTCAAACGCGCGGGCGGTAACCGCGAACTTGAAATCGCCATGCTCAAAAAGCATGGGTACATCGTCTAGAGGGAGATTCACGTATGGTTGACGACCCGCAGAACACCGGCACGGGTAGTACCGAGGGTGACCAGAGCGACCAGAGCGACCGGGGCAAGACCGGCGACCCGCAGGGGGACCCGGGTGTGGAGCCCGGGAGTGACGACCAGGGCGACGCGTCCGCCGAGTTGTCCGCCGAGCGTGCCGCACGTGCTGCCGCAGAGAAGCGCGCGACTGAGGCTGAGGCGGAATCCGCTCGGCTCCGACGCTCGAACGCAGCGGTCAAGGGCGTCGACCTTGACGCGCTCCGGGCCGAAGTGCGTGCCGAGTTCACCGGGCAGATTGTCCGGGCAGAGGTACGGGCCGCTGCGACCGGGCGACTCCGGGACCCTGCGGACGCGCTCTCGATGCTCGACCTTGACGCGCTCGCCGGCTCCGGGGGCGACGTGGATGCAAAGGCGGTCGCTGCTGCGGTCGCCGAGCTGGTGAAGAACAAGCCGTATCTTGCTGCGTCTGCCGAGAGCACCAGCACGGGCACCAGCTCGGCCCCGACTGTTCCGGCCCCGTGGGGCGACGTGGGCGCGGGACCGCGCAGTGAGAGCGCCGAGGGCGAGCCTGCCGCAGGGTTCGACCGGATGCGGAACGCGTACAGCAAGACCGACTAGGCGAAACGTTCCGCCTACCCATTCCGAGGGACGCACCCATTGCGGGTGCCGTCCCTTTTTTCATGCCCAAAATCAAGGGGAATTTAAATGGCACTGACTCTTCCTGAGGCTGCGAAGCTCTCGACTGACGAACTCCAGCGCGGGGTTATTGAGACCTTTGTTCAGGAGTCCAGCATTCTGGACCGTATTCCACTGCTGACCATCGAGGGCAATTCCTACGCTTACAACGAGGAAGGCACTCTGCCGGGTGTTGAGTTCCGGTCCGTGAATGAGGCATATTCCGAGTCGACGGGCACCGTGAATCAGAAGTCTGAGCGGCTGGTGATCCTCGGCGGGGATGCCGATGTCGATAAGTTCATTGTGAAGACCCGGGGCAACCTGAACGATCAGCGCGCCACCCAGACTCGCATGAAGATTAAGGCCGCGTCGTACAGGTTTCAGGATGCCTTTTTCAACGGTGACGTGGCCACGGAGCCGAAGGGTTTCGACGGTCTGCGTAAGCGTCTGACGGGTGCACAGGTCATTTCTGCGGGTGCCAATGGCGCGGGCATCGTCGGTGTGGACGGGGCCGATGCGCACGCCTTCTTTGACCTCATGGATCGGCTGATTGCGCAGGTCCCGGGCCTGAACGCTGCGAACGGTGCTCTCTACGCGAACGCTGGTGTGATCGCCCGTATCAAGTCCGCGGCGCGTCGGATCGGCGGTTTCGAAATGGTCCGGGAATCGCTTACCGGAAAGACCGTTGCGACCTATAACGGGATTGCCCTGCTCGACCCCGGGCAGAATGCGACCGGTGCGGATATCCTCCCGCAGACCGAGACGCAGGGTACCGCGAACAATGCGTCCAGCATTTACGCCGTGCGGTTCGGGCAGAGCGAGGATGACCGCGCCGTGACCGGTCTCACCAATGGGGGCATTCAGGTTACCGATCTCGGCGAGCTTGAGTCCAAGCCTAGCTATCGGACGCGGATTGAGTTCTACACCGGTCTCGCTGTTTTCGGTGGCCGTGGTGCCGCTCGCCTTAACGGCGTTCTCGCGAAGTAAGGGGCCGGGATGCCACCGCGTAAGCGTGCTGTCGTTCTCACATTCAAAATTCAGCACACGGAGTCGTGCCCACCCTCGCCAAGGATCGAAATGTTTCCTGTTTCTGATTCCGGCGAGGAAGCTCGCACGGTCGTGCGGTGTTTGGAGTGCGCCGCTCAGGAAATCAAGGAATAGAGGGGGCGGAAACTATGGTGCTGCCCCCTCTGGCCACGGTCGCCGAGCTTGCGGCATGGATGCAACGCGAGCCGGCTGAGCTGCCCCCGGGGGCTCCGCTGGTGCTCGACACCGCATCGGCCATCGTCCGCAGTGAGGCACGGCAACGGTTCACCCGGGGGACGACGATGGTCGCCCTGGTCGCCCGGGAGCGGGTCATCACCCTGCCCCAACGCCCGGTGCTCGGAGTCGAGTTGGTGCGCGTCGCCGGTCGGGTTCTGCGGACGGATGAGTACCGGGTGATCCCGGGCGGGGTCCTCGTTCTAGTGCCCCTCGGTCACCTGTCCTCGGTCGCCGTGACTTACCGGCATGGTTACGCCGAGACACCCGGGGATGTCCGGGCGATCGTGCTCACCCTCGCGGCCCGGGTGCTCAACAACCCGGGTGATCTCCGGCAGGAGAGTGTGGGCAGCGTGTCCGTGACCTACGCGGCCGAGAGCATCGGGGCATCCCTCGCCGCCATTGAGCGGGACCAGCTCGCCCGGTACCGGCCCCGTGCAGCCGTGGTCCAGCTTGGTACCGCCGAGGGGCGGCGCTGGTGACTCTCCTCTATACACAGACCGTGGTGACCCTGCGGGCTCCGTTCGTGGTCGACCGGTACGGCAACGAGACCACCGTTCGCGACTGGACCCGCGCGACCAGGACCACCGTGCGCAGAGTCTCCGTCCAGCCGGACCAGTCGGCCGAGGGCACCGGGGACCGTGCTGCCGTGGTCACCGGGTGGCGACTGATCACCCGACGCGGGGTCGACGTCGACCTAGGACCCGGGGACCGCATCGAGCACGCGGGCCGGCTGCTCGATGTCGACGGGGACGTTCAGCGGTACGTCCTCGGCGGTCGGCACCACCACACGGAGTGCCGACTCCGGGAGGTAAGCGGCTGATGAGATTCCGACCGAACAGGCGCGGGATCTACAGCCTGATGAAAACGAATGGCGCAGGGGCAGCCGTTCGCCGAGCTGCCGAGCGAATCGCGGGATCGGCTGGTGACGGATTCCGTACGGATTCCGCGCTCGGTCGTCGCCGGTGGCGCGCTGCCGTCATCGGGAATTACGACAAGCCCCGTGACGCCGAGGGCACCCGTTCGGCACTGCTGCGAGGGCTCGATGGGGGCAGGGAATGAGTCGCCCGATCATCGTCATGCCCGACGCGGTGGCCGTGACGATTGGCTATCTCCGCCCCGCTCTCGCGGCTGTTGGTGAACCCGTTCCGGTGGTGTCCCGAATCCCCTTGCCCCGCCCAGCTCGGTTCGTCCGGGTGCGGCGTGTTGGGGGATTGCAGCAGACACCCGTATCCGATCGTCCTCGGCTCGACATTCACGCATGGGCGGACACCGAAGCGGGGGCCGCTGATCTGGTCGCACTGGTCCGCGGACTACTCGGAGCAATGCCCGGAGTCCGCGGCGGTGTCCCCGTATACCGAGTGACCGAGGTAGGGGGCCCGCAGTGGCTTCCCGACTCCGAATCGTCCTCGCCGCGCTATGCCCTCGCGGTCGAAATCCACATGCGGGGACGTGTTCTCTAACCGCTGCGTTGGGCCCCTGGGGCGGCTCCGCAGCTTTCTCTCTGCTGCGTTGAGGCTATCGCTCCGCAGCATCATTCCCGAGGAGTTCGTTTTGGCTCTAGATGCAACTGCGGTGCGCGTCGCCATTACCGGCGCTGCCTATGTCGGCCCGCGTGGAACCACTCTGCCGACCGATGCAACTACCCCGTGGCCGACTGCCGTTCAGGATATCGGCTGGATTTCGGACGACGGGATCACCGAATCAAACTCGGCCGAGACCAGCGAAATCAAGGGCTGGCAGGGCGGGCAGACCGTTCGGAAGGTTATTAGTTCGAGCGAAGTGACGTTCACTTTCACCGCAATCGAGACCAGCAAGACCGTGCTTGAGCTCTATCACAAGGGGAGCAAGGTCGTAACGACCACCGGCAAGAGCGTGCTTGCCATTAAGGCGCCCGGTCCGGACCGACGTATTTTCGGATTCGATGTGATCGACGGTGGCTCACACCTTCGGATTGCCATCCCGGACGGCGAGGTTACCGAAACGGGCGATATCACATACAAGGGTGACGAGGCTATTGCCTACGAGATCACCATTACCGCCTATCCGGGACCGGACGGGACGGTCGCAATCAAGTACTCCGATGACCCGGCATGGGCCACTCCTGCGGGCGTTGCACCGCTCGCTAAGTGAGAGACGAAACGATCCGCCTACGCCATAAAGGAACATCATAATGAGTACTGCTTTCGACCTTGATGTATGGGTTCGCGAGGCCCGGCGCACGCCTTTCCCTTTCACTCTGTCCGGGGTGCTTTTCGAGCTGCCGCCCGCTGGCGAGCTGGATAAGGAACTTTTGAAAAAGGTCAATCTCGATGCGCCGAGTGCAACCGACATCGAGACCCTCCTTAAGGCCGGTCTCGGAGAGCAGTGGCCTCGGTTTGATGAAATCCCCGTGCCCCTCGCCGCATTGGGTGAACTCTTTCGCCAGTGGCAGAAGCATGAGGGTACGCCACTGGGGGAATCTCCGGCCTCTACCGACTCCTGACTGAGCACGGAGAGGCAATAGAGGCGGACCTACAGAGGTATTACCAGGTCGATATCCGGGACCTTTTCCGGCCCGGTACGGGGCTCACGTGGCGGCGGCTCCGGGCCCTGGTGCTCAATCTCCCGCAGGAATCGGCATTGGGCAGGGCAATGGGAGGTCCTGACTTTGTCTGGACGCTAGAGACACAGCTACTCGCGGCCATTCATGACCGGGTGGCGGAGGGGAATTGGCAGCGCGGGAATGCGGGGGCCAAGACTCCGAGCCGTCGACCGTCCCCGATTCCCCGCCCGGGTGTCGATTCGGGCCGGATCGGCGGGACCGATCGGAGTCCGCAGGAAGTCGCCGAGTACCTCGCCCGATTCCAGCCGACAGGGGGTGACGGCTAATGGCTGTTGAAGTCGGTATGGGCTATGTGTCCGTCGTTCCAGAGGTTCAAGGCTTTGCGGCAGAGCTACAGCAGCAAGTCACCGGGCCGGCGGACGCTGCGGGGCAGGATGCGGGACAGCAGGCCGGACAAGGCTTCACCGGGCAAATGGGTGGGGTTCTTAAATCGGGGCTTGCGGCTGTTGCTATGGCGGCTGCCGCAGTGCTCGCGGTGGGGTTCGTCAAAGCTCTGGACCAGTCCAATATCCCGGGCAAAATCCAAGCTCAGCTCGGGTCGACCCCTGCCGAGGCCCAGCGGTACGGCAAGATCGCCGGTGATCTTTACGCGCACGGGATAGCCAATTCTGTAGAAGATGCTGCGCAAGCGGTGGCGGCCGTGATGCGGTCCGGGATTATGCCGGTCGGCGCCACGAATAAACAGATTGATGAGATCACCGGCAAGGTCTCGAATTTGGCCAGCACCTTCGAGCTGGACCTAGGCCAGACCGCAAATTCGGTCGGCCAGATGCTGAAGACCGGTATTGCCAAAGACGGTACGGAAGCGCTCGACCTTATGACGGTCGCCATGCAAAAAATGGGACCGCGCGCTGACGACCTGTCCGACACCATGAATGAATACAGCACCAAATTTCGGGACCTCGGCCTCTCTGGTGCTGACGCAATTGGTCTAATGGCGCAGGGTATGGCCGCTGGTGCGCGCGATACCGACACCATGGCGGACGCTCTGAAGGAATTTCAGATCAGGGCGACGGACGGCAGCGAATCCAGCAAAGAGGCGTATGAAGCCATCGGGCTAAGCGCCGAATATATGACCCGGAAAATCGCGGGTGGCGGTAAGGGTGCCCGCGAGGGACTGCAACAGGTCTTGGACGGTATCAAAGCCATTAAGGACCCTGCCGAACAGAACGCCGTAGCGGTCGGACTTTTCGGCACTAAGTCCGAGGATTTGGGTCGGGCTTTGCTTGCAATGGACCCTCGTACCGCAGTAAAGGCGCTCGGTGATACTGCTGGTGCAGCGACCACAATGGGTGACGCTCTGCACTCCGGTGCTGGAGCCCGCATTGAGCAACTGAAGCGCACGGCGGAAATGGCGCTGACGAATTTTTTCGGGAACCACGTCATACCCGTCATGATGACAACCGGTCGGGTAGTTGCCGACTATTTCGCGCCTGGGTTTCGAATAGCCAAGTCTGCTGTCGGGGACATGGTGGGCGTGTTCTCTGGCGACGGAGTACGCGTCCTCGCCGGCTTCGGAAGGGTGCTGACCGATACCGGCAGCAGCTTACGCGCAGATCTAGCCCCGGGATTGGGAGAGCTCGTTACGCAGATGCGGGCACAGCTTCTGCCCGCATTCCGGGATACCTGGGCCTTCATATCGAGCCACGTACTGCCCGTGGCGGGATTGCTGGTATCTGTCGTTGGCGGCGCTCTAGGGCCCATCTTGTCAGCGGTATCCCGGATTCTTACGGAGACCCTTTGGCCCGCACTAGTAAAAATCCACAACCAGTTCCTGACCGGCCTTAAGCCCGTTCTAGCTCAGGTATCAGAGTTCATATCGACCCGTGTTAGCCCTGCAATGCGTTCGCTGGGCGAGCGGTTGGGCGAGCTACTACGTAAGGCACAACCAGTCATATCAACCCTGGCCACTCTCATTACGTGGATGGTGACTCTCGCCGCCCGCGTGGGCGGTGTGGCCATACCTGTACTGCTCCGGCTGGCAGGCCCCGTTTTCTCTGCGCTCTTCTCTGCGCTCGGGACCGCCATCCGTTGGATTGGCAATGTCGTCGCCGTAGTAGGCGTGATGGGGAGCGCATTCATCGGTGCCGTGCGCTGGGTCGGCACCTTTGCATCCGGGGCCCGAAAGCAACTCGGGGACTTCACCGAGTGGATGAAAAGTTTGCCGGGCCGGATCCGATCTGCCCTCGGTGACTTCGGCGGACTACTGGTCGACAAGGGTCGAGATCTCGCCCGGGGTATCTGGGATGGAATCCAGAGCATGGGCGGATGGCTGCGCGACAAGCTCATGGGGTGGGCCCGGTCTGCGATTCCCGGACCCATCGCCGATGCCCTCGGCATCAACTCACCGTCCACGCTGCTGCGGGATGAAGTGGGCCGGTGGCTGCCCCCGGGCGTTGTCGACGGAATAGACGATGCGCAGCCTGATTTGGACGCGCGCCTTAAGGCCATGGTCACCGTGCCGGACCTTCGACCCGTGAGGGCTCCGGGAGTTCTCCGGGCACCTTCAGGGGCAGCCGTCCGGGATCCCGGCCTTACCGCGCTCCTCAGGGCTCTTGAGGACGACCGAGGGCGGGACATCGTCATCCGCGTGGGAGAGACCGAGATAGCCCGCGCGGTTGCTGCTGGGCAACGCCAACTCGCAAGGAGGTGA

Protein sequences of DBSCAN-SWA_2

>NZ_CP042266|6498137:6513417|6501125_6501518_+|WP_146482598.1|DBSCAN-SWA
MPRRPRRPCTAPGCPELTPRGGRCPKHQKEADRAREAGGRTYDTRWQRVRRAYLYANPWCVLCSALANVADHHPVSRRELIARGEPNPDAWKHMRPVCASCHNAETAQRQPGGFAAERRSEREANDRPPF
>NZ_CP042266|6498137:6513417|6506929_6507886_+|WP_146483072.1|DBSCAN-SWA
MALTLPEAAKLSTDELQRGVIETFVQESSILDRIPLLTIEGNSYAYNEEGTLPGVEFRSVNEAYSESTGTVNQKSERLVILGGDADVDKFIVKTRGNLNDQRATQTRMKIKAASYRFQDAFFNGDVATEPKGFDGLRKRLTGAQVISAGANGAGIVGVDGADAHAFFDLMDRLIAQVPGLNAANGALYANAGVIARIKSAARRIGGFEMVRESLTGKTVATYNGIALLDPGQNATGADILPQTETQGTANNASSIYAVRFGQSEDDRAVTGLTNGGIQVTDLGELESKPSYRTRIEFYTGLAVFGGRGAARLNGVLAK
>NZ_CP042266|6498137:6513417|6511029_6513417_+|WP_146483079.1|DBSCAN-SWA
MAVEVGMGYVSVVPEVQGFAAELQQQVTGPADAAGQDAGQQAGQGFTGQMGGVLKSGLAAVAMAAAAVLAVGFVKALDQSNIPGKIQAQLGSTPAEAQRYGKIAGDLYAHGIANSVEDAAQAVAAVMRSGIMPVGATNKQIDEITGKVSNLASTFELDLGQTANSVGQMLKTGIAKDGTEALDLMTVAMQKMGPRADDLSDTMNEYSTKFRDLGLSGADAIGLMAQGMAAGARDTDTMADALKEFQIRATDGSESSKEAYEAIGLSAEYMTRKIAGGGKGAREGLQQVLDGIKAIKDPAEQNAVAVGLFGTKSEDLGRALLAMDPRTAVKALGDTAGAATTMGDALHSGAGARIEQLKRTAEMALTNFFGNHVIPVMMTTGRVVADYFAPGFRIAKSAVGDMVGVFSGDGVRVLAGFGRVLTDTGSSLRADLAPGLGELVTQMRAQLLPAFRDTWAFISSHVLPVAGLLVSVVGGALGPILSAVSRILTETLWPALVKIHNQFLTGLKPVLAQVSEFISTRVSPAMRSLGERLGELLRKAQPVISTLATLITWMVTLAARVGGVAIPVLLRLAGPVFSALFSALGTAIRWIGNVVAVVGVMGSAFIGAVRWVGTFASGARKQLGDFTEWMKSLPGRIRSALGDFGGLLVDKGRDLARGIWDGIQSMGGWLRDKLMGWARSAIPGPIADALGINSPSTLLRDEVGRWLPPGVVDGIDDAQPDLDARLKAMVTVPDLRPVRAPGVLRAPSGAAVRDPGLTALLRALEDDRGRDIVIRVGETEIARAVAAGQRQLARR
>NZ_CP042266|6498137:6513417|6500538_6500886_+|WP_146482597.1|DBSCAN-SWA
MRCIDCPANATHRGRCEDHHRAYENRAPVRSRRSRGRRRAKRYEGAARLRALVDARGSGWCAWCLESFPAEGLEIDHVCPLAMGGEDIDRNVHALCTGCHGLKTRTEFGGARVDA
>NZ_CP042266|6498137:6513417|6508074_6508641_+|WP_146483073.1|DBSCAN-SWA
MVLPPLATVAELAAWMQREPAELPPGAPLVLDTASAIVRSEARQRFTRGTTMVALVARERVITLPQRPVLGVELVRVAGRVLRTDEYRVIPGGVLVLVPLGHLSSVAVTYRHGYAETPGDVRAIVLTLAARVLNNPGDLRQESVGSVSVTYAAESIGASLAAIERDQLARYRPRAAVVQLGTAEGRRW
>NZ_CP042266|6498137:6513417|6509217_6509622_+|WP_146483076.1|DBSCAN-SWA
MSRPIIVMPDAVAVTIGYLRPALAAVGEPVPVVSRIPLPRPARFVRVRRVGGLQQTPVSDRPRLDIHAWADTEAGAADLVALVRGLLGAMPGVRGGVPVYRVTEVGGPQWLPDSESSSPRYALAVEIHMRGRVL
>NZ_CP042266|6498137:6513417|6508981_6509221_+|WP_146483075.1|DBSCAN-SWA
MRFRPNRRGIYSLMKTNGAGAAVRRAAERIAGSAGDGFRTDSALGRRRWRAAVIGNYDKPRDAEGTRSALLRGLDGGRE
>NZ_CP042266|6498137:6513417|6498137_6499850_+|WP_146483066.1|DBSCAN-SWA
MGAHIMGMTSMNAPVAPVTAYDGCGMCLLGLRRLSRVKGATSSPERQEALVLSAAEAVGGHIIAWADDWEVSGATDPLTRPGLGPWLRGEKGPYDGLAGSAVDRIGRNVVDVLSTAYANHSAGRALVTADHNGIWDLNDSNQENELTLKAMGAQMEHRAIRERNRQELRRARAVGQISSRPSYGYRNVRPAPTQKVTHRELEEHSAEVLRDVARRILLDTTDKTTPYSEAARLTLAGELAPVDWLANQYGREPKGIAWGGKSLHDMLVSEAALGYLMHQGRPVLDKSGKPYRVGPPLWDRATHIALKAKLAASPKRTMKSRTPRAPQQKTRLSGGIATCGNCGENMYRNGTTSKGKYPAYRCTARNRGIPGSQHCGRKLGAPKAPGTFASPIIARAELDSIVERWFLDRFGTALLMKSVYDPGSGHAAAIAELEAARARLRDDRQAGIYDSPDDAEWFRTRFADIGREIAELKKLPDRPAGWTSVPTGKTVTDEWHATTTEAAKREMLEAHGIQVVVYPTERNMGRVVITSTIPHDPVAEATDTEGNPGHPAMRGDRGSHMRIAEPVLAA
>NZ_CP042266|6498137:6513417|6505226_6506207_+|WP_146483070.1|DBSCAN-SWA
MADSGALALARYMEVQGIARGVLEAIQALWRDVTPDRILSAMQGETGRQILAAVTAGQMTAAAGAQAFVTGAMLAQGAAAGPVGMLAPERLAGIAADGRTLATLLYLPAIRTAQALALGAAPEVASLAGLNQMATMVSTTITDTARTATSVAMAAEPRCRFYVRVVRLPACARCIILAGQTYSYSEGFKRHPRCDCGVEPMTDREWKASKGPEDLIREMTPEEQHKRLGAAGVKALEAGADLGQIVNARRGMATAQTSGGPVRVTTEGTTKRGIGVKAMGSEFQKVPTSRYMRTVEARQMPETIFKRAGGNRELEIAMLKKHGYIV
>NZ_CP042266|6498137:6513417|6501624_6502107_+|WP_146483067.1|terminase|DBSCAN-SWA
MAVPGQKPKPHIQAVREGTFRPDRNSEGARFAPLEPIEPDWTELLPGDASEDVRGKAADVWARTVPALVASAGLTDSQRETVIEYCLTVARLWQAERELSRTGLVVETERGNVKSPWVTIAHQYRTHFRSLVGELGLSPAAATRITPPDFGGDDDDDVFD
>NZ_CP042266|6498137:6513417|6502087_6503785_+|WP_146483068.1|terminase|DBSCAN-SWA
MTTCSTDDLPVPLDALRALGLSEDDISAACRSRPLVVAAQAKDAPGAYFDVAAARRAVRAIQKFKHTKGRWGRSRLKLDPWQVVWVVAPIFGWLAYDPELGRAVRVIRSAWIEVPRKNGKSTLSSGIGLVLLLADREIGAEVYAAAGSLPQAERVFDDAKRMALTSRLVRGRVEVLRGLIRVPRTGGIFRALSKIAETAHGLNVSGAIVDEVHVHKRRDLIDAIETGTGARDQPLIIFITTADEGTEGSIYDEKHTYTRRCAEDIVSDPAHYGVIWAADEKDDPYAESTWRKANPGLGVSPSLAYMRREANKAKSTPSYFATFCRLSLNRRMRSASRWLPISLWDEGKGPVDDKTFRYRRAWGGVDLSAVSDLSAWVLAVESRVPGVELELVARFWLPEERADELEQQLQVPIRQWAADGLLTLTEGDAIDYDAIERQIVEDCRRLDVQRISYDRMFAGQLVQRIEKKTRGVDVVPVAQTYLGMSPGCKELERLLREGRIRHGGQPVLRWNASVVEVYRDGNDNMRPIKTDRDKSSARIDGVVAAVMALDGYVRRPLKRPRAASA
>NZ_CP042266|6498137:6513417|6508637_6508982_+|WP_146483074.1|DBSCAN-SWA
MTLLYTQTVVTLRAPFVVDRYGNETTVRDWTRATRTTVRRVSVQPDQSAEGTGDRAAVVTGWRLITRRGVDVDLGPGDRIEHAGRLLDVDGDVQRYVLGGRHHHTECRLREVSG
>NZ_CP042266|6498137:6513417|6510332_6510644_+|WP_146483078.1|DBSCAN-SWA
MSTAFDLDVWVREARRTPFPFTLSGVLFELPPAGELDKELLKKVNLDAPSATDIETLLKAGLGEQWPRFDEIPVPLAALGELFRQWQKHEGTPLGESPASTDS
>NZ_CP042266|6498137:6513417|6509734_6510292_+|WP_146483077.1|tail|DBSCAN-SWA
MRVAITGAAYVGPRGTTLPTDATTPWPTAVQDIGWISDDGITESNSAETSEIKGWQGGQTVRKVISSSEVTFTFTAIETSKTVLELYHKGSKVVTTTGKSVLAIKAPGPDRRIFGFDVIDGGSHLRIAIPDGEVTETGDITYKGDEAIAYEITITAYPGPDGTVAIKYSDDPAWATPAGVAPLAK
>NZ_CP042266|6498137:6513417|6503802_6505227_+|WP_146483069.1|portal|DBSCAN-SWA
MAETPLQMTIRLYRKLKRRGHKVRTWSDYFEGKHPLLFASPEFSTQTGDLFDGFSDNWCRTIVHATAERLRPLAFRLADGSIDKAAGRAWKRSGCHVEANLALLEALISGRSYALVWKPDGVHTEITFEKSTTAIVEYVPGRRRLRAAGLKVWTDHDLEFATLFTPTMVYRWQRPRRDGGQWTGRTAGLSRGQPSHIPNPLRVVPLVELPNLVRLGASPVSELAPVIPLQNSINALWVHAMTASDERALPARVVLGMDRPVREIIDPDTGEVVGEEDEPLAKFRSDRLLWLERQGASIAEFSAADLRGFLDLITQAVEHVAAQTRTPAIYLNKKLINIPESAVSADESGLVAKAYEKQDHFGAGLQEVMRLEALAAGEPDRAESLSMGSVVWRDPHFRTEVQYADSLVKLKGIGVPDEALWERIPGVTHDEIERWKRMRTDQAAAILGGDLAALYGPKPTEGEQGSAEPVPEVA
>NZ_CP042266|6498137:6513417|6506221_6506842_+|WP_146483071.1|DBSCAN-SWA
MVDDPQNTGTGSTEGDQSDQSDRGKTGDPQGDPGVEPGSDDQGDASAELSAERAARAAAEKRATEAEAESARLRRSNAAVKGVDLDALRAEVRAEFTGQIVRAEVRAAATGRLRDPADALSMLDLDALAGSGGDVDAKAVAAAVAELVKNKPYLAASAESTSTGTSSAPTVPAPWGDVGAGPRSESAEGEPAAGFDRMRNAYSKTD

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_146483066.1|6498137_6499850_+	recombinase family protein	A0A1S5Y2X8	uncultured_archaeal_virus	1.8e-07	29.2
WP_146482597.1|6500538_6500886_+	HNH endonuclease	Q858X1	Streptomyces_virus	1.5e-17	42.6
WP_146482598.1|6501125_6501518_+	HNH endonuclease	A0A2H5BM35	Streptomyces_phage	2.1e-36	64.4
WP_146483067.1|6501624_6502107_+|terminase	P27 family phage terminase small subunit	A0A2P1JSY0	Streptomyces_phage	1.4e-53	62.3
WP_146483068.1|6502087_6503785_+|terminase	terminase large subunit	A0A2H5BLT3	Streptomyces_phage	6.3e-271	81.2
WP_146483069.1|6503802_6505227_+|portal	phage portal protein	A0A2H5BLQ6	Streptomyces_phage	5.1e-157	59.3
WP_146483070.1|6505226_6506207_+	hypothetical protein	A0A2H5BLR1	Streptomyces_phage	2.3e-108	66.3
WP_146483071.1|6506221_6506842_+	hypothetical protein	NA	NA	NA	NA
WP_146483072.1|6506929_6507886_+	hypothetical protein	A0A2H5BLW0	Streptomyces_phage	1.5e-125	72.9
WP_146483073.1|6508074_6508641_+	hypothetical protein	A0A2H5BLU2	Streptomyces_phage	3.3e-35	49.7
WP_146483074.1|6508637_6508982_+	hypothetical protein	A0A2P1JSY3	Streptomyces_phage	1.8e-28	56.4
WP_146483075.1|6508981_6509221_+	hypothetical protein	NA	NA	NA	NA
WP_146483076.1|6509217_6509622_+	hypothetical protein	Q6VY47	Streptomyces_phage	3.9e-30	54.2
WP_146483077.1|6509734_6510292_+|tail	phage tail protein	A0A1U9WRZ9	Gordonia_phage	1.6e-21	37.4
WP_146483078.1|6510332_6510644_+	hypothetical protein	NA	NA	NA	NA
WP_146483079.1|6511029_6513417_+	hypothetical protein	A0A2H5BLS1	Streptomyces_phage	2.4e-95	46.1

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NZ_CP042266|6516469:6527340|DBSCAN-SWA
CATGAACAGAGACCCGACCAGCCGGCCCGGTTCGGAGGATGAACCGCTCGGCGTCGTCTCGATTGGTGCCCGTGAAATCTATGACGCGGTGGTCGGGCTCCGCGAGGACGTGCGATCCCTCGGAGAACAAGGCGAATCCGTCGAAGAGACGCTAGCCGACCATGAGACCCGCATTCGCGGACTGGAGTCCGAGCGGGGCAAGTTCGTTCTTCCCGCTGCGCTGATTACCGCAGTGGCAACCGTCGTTGCTGCGGGTCTCGCCGTTGCAAAAGTCGCAGGGGGCCCGTAGAGCGCCGAAAAACCACAAACACTAGCCCCGTACCGGGTGACCCGGGCGGGGCTTTCACATGCCCACAGGGGGACGTATGGCCAAGTTCACGGGTGCCGAGTGGCGACCCATTCCGATCAACCACACTCCGGGCGGACAGGATTCGGTCCGCGGAGTCGTGATTCACATCATGGCCGGGACGCTGGTGGGAACGGATTCGTGGTTCCGTAACCCAAAGGCCCGTGCGTCCTCGCATTTCGGGACCGGCAAGGGCGGCAAGTGCTATCAGTGGGTCTCGACTGCCGACCGTGCTTGGGCGCAGGGGAACGGGAACCGGGATTGGCTCTCGATTGAGAACGAGGGTAAGGGCGGAGACGCTCTCACCTCTGAGCAGATAGACCGTTGCGCGGAAATCCTCGCATGGGCGCATAAGCGGTACGGCGTTCCCCTCGCGGTGGCCACCAGCCCCACCGGGCGCGGGCTCGGCTATCACGCCATGGGCGGTAAGGCATGGGGTTCGCACCCCGCGTGCCCCGGGGTCCGGATCATCGCTCAGCTTCCCGAAATCCTCCGGCGCGCTGCTGCCCTGGTGGGCGACAAGCCCAAGCCCAAGCCACCCGTAGGGAAGTACGCCGCGTTCCCCGGAGCCGCGTTCTTCCGGTCCTCGCCCCGCTCGCCCCTGGTCACTGCCATGGGTCGTCGGCTGGTCGCCGAGGGATGCGGCCGGTACGCGTCGGGTCCTGGTCCGCAGTGGACCGAGAGCGACCGCAAGAGTTACGCGGCATGGCAGCGCAAGCGGGGCTACTCCGGGGCCGACGCGGACGGATGGCCCGGCAAGACGACGTGGGACGCGCTCCGGGTGCCCCGGGTCTGACCACGCGCCGTGACCGATCTCCGGCGCGCGGGGACCAGCTCGTCCCCGGCCCGGACCAGGACCACCACACACCACTCACTCACAGCAACAGGGGACACCCATGCCTTTCATCGCCACTCATCCCGCCCGTGTCTACGCGGTCGCTGCTGCGTCGCTCGCCCTGGTCGTCCATTACGTACCTGATCTGCCTTCGGCCCTGGTCCTCGGTCTGGTCGGCGCGGTGCTCGGTCTTGGCGAAACCGTCCAGCGTGCCGAGGACCGGAAGACCAGCCGAGCCGGCGAGGGCGACGCGTGAGCTACCGCCATGTCGCACTGATCGGCCGAGCGGGCTCCGGTAAGGACACCGTGGGCGAACATCTGGTCGCCCGCTTTCAGTTCTTCCGGGTGGCGTTCGCCGATCCGTTGAAGACGCTTGCGCTCGACCTTGACCCGATCGTTTCCAACGAGCCGACCGGGTACGGCCCCCTGTCCCTGCGTCTGTCCGATGTGGTCCGCCGTGACGGATGGGACCGGGCCAAGCAACTCCCGGAAGTACGACGGCTGTTGCAGCGCACCGGGCAAGCACTCCGGGACCGGGACCCGGACGTGTGGCTACGGCCCTTGCTCGACAAGATCACCGTTGCCGATCGCTGGAACGTCCCCGTAGTGATCACGGATGTCCGGTACCGCAATGAGGCGGACGCGCTCAGGAAGCGCGGGGCACTGCTGGTCCAGGTCGACCGTCCCGGAGAGCACGACCACCAGCCCGACCAGGACCAGCGCGAGCACCGGTCCGAGACCGAGCTACGCGACTTCCCCGCCGATGCGGTGCTGACGAATGGCGGCACGGTCGCCGAGTTGCACGCCCTTGCGGACCAGCTCGCCGTACGGCGCTGACAGCAGTACGGGCGATGCCGGGATGACAGTCCGGCTCTCCCTTTTCCTTTCTCTCTACTTTTTTAGACGCAATCCAAAAAAGTCTAGAAACGTCATCTCGCCATCCTCGCCGAAGACTTCCCATGAGGGGACACCTATGCCCGGAGCCATCCGGACCATCAAGCGCGGCGGCAGCCGCTTCTATATCCATCCGTCAACCTCCGAAAAGGTTCCGGGTGTGACCAGCATCGTGGGCATGTTGCCCAAGCCCTACCTGACTTTCTGGGCTGCCCGGATGACCGCCGAAACGGCCGTTGAGAATCTGGACGCCGTACGGTCTATCGCTGAGCGGGACCCTGCGGGGGCAGTTGACTTCCTGAGGAACGCACACGTTCGGTACACCAACCTGCGGGCAAAGGTCGGCTCACAGGCGCATGACCTTTTCGAGCGCATGATCCGGCTTGAAGAGATTGGCCGTGTGCACCCGGATATGGAGCCGTACCGGCTCGGTTTCGCCGAGTTCCTAACCGCTGTGCGCCCCGAACTCATTCACGCCGAGGACGTTTGCTGGTCGGATGAGCACGGCTACGCAGGGTCGTTCGATGCCATCGTTCGCGTGCGGCTCGGCGCGGACGGAAAGCCGGACCACGAAAACGGCGAGTGGCACACGCTGTTGGTCGACTGGAAAACCAGCAAGAGCGCATACCCGGACGTCGCTCTACAGCTTGCTGCGTACGCGAATGCGGACCGCGTCATCTCGCCGGACGGCACCAGCAAGCCCATGCCCAAGGTTGACGGCGCTGCGGTGCTCCATATCACCCCGGAGGGTTGGGTGTTCAAGCCGGTCCGTATCGACTCCGAGATTTTCAATGTCTTTCTGACGCTTCGACACGTGTTCCATTGGGACCGAGACCTGAGCAAGACCGTGTTCGGTGTGCCGATCGCGGAGAGCGTCCGCCGGCTCATCACCGGAACGCAACGCCGAGCGGCGTAGTCGACACCAGCACCATCATTCCCTTTTCAGGGCGGAACCCGGACCACGGGCCGCCCTTTTTCATGCCCAAAATCAGGAGTCATTCATGTCGCTTCGCATTTTCGAGACCGACCCCGACGCTATGCCGAAGGGTTCTTTCAGTGATGACACCGTGGGGCGTTTCCATGGCGGGAAGCAGGTCGACAACCTGCCGGTGGCACTTTCTGAGTGGCGCGTGACGACCGGTGACCCGGAAGTTGCGGATGCTATCGCCCAGCTTATGGGCGGGTCGCCGGTAGAGACCGATTCTACTTCCGAGAACTTCATTGAGATCATGACCGATCGGGAAAAGGTTCAGGTGGTCCTGTCGGGCCCGGACGCTATCGCATCCGACCTGAAGCTGTGGAATGGGAACACCCTGATTCACCACTGTGACGGAGTGGAATTCCTTTCCCCGGATGAGGACCGGGGTAAGGCGTGCGGGTGCCCCGCCCTAATGGAGGACCGTAAGGCAGCCGCTAAGGCGAAGCGGGGTCCGTCGCCGTCCATTTCGGTCACGTTCCGGATTGCCGAGGATTACGACCTGGGTATGTTCCGGCTTCAGACCGGATCTTGGAAGCTCGCCGAGGTTCTGCACGAGATTGAGAACGCGCTGAACAAGGTGGGCAGCGAGGCTCTGTGCACGCTGGAACTTGAGCTGGTGGAGTACACCACAAAGAAAGGTCGCGATGTCAGCTACCGCAAGCCTGTGATTCGTGTTCTCAAGTCCTGGTCGGATGCTGTTGCCGACCCGGCGCACTAGCCGGCCCGGGGGCTAAAATTCCCATTCTTGAGTTGTGCGCGGGGTACGGCGGAATTGGTCGGGCCGTTGAGGCATTGACCGGTGACAGGGTGCGGTACGTAGCGGAGATCGACCCGTACGCGTCCCTCATTCTGGAAAAGCGGTACCCCGGCGCACCCAACATTGGCGACATTACTCAATTCGACTGGGGAACCCTGCGGGGGCGGGTCGACATCGTCACCGCGGGTTTCCCCTGTCAGGACATCTCAAATGCGGGAAAGCGGGTGGGAATTCATGGCGAGCGCTCCGGTATCTGGCAGCACGTTGCCGCATCCATTCGCGTCCTACGACCACGGTTCGCATTCTTGGAAAATGTCTCGGCGATCCGATCGCGCGGTCTCGACGTTGTGGCGGCAGACCTGGCCAAGATCGGGTATGACCTGCGGTGGTGCTGCCTACGAGCGTCCGCAGTGGGCGCCCCGCACATGCGAGACCGGTGGTTCGGAATCGCCACACTTTCCGACTCCGAAAAGGTCTGACGGGCCCAAGGGGTCCCCGAATCAGCGCGGCAGCAAAGGCGATTACGCGTTGCCCGGGACCGTGGTGAATCTGCTGCCGACCCCCACCGCAAGCATGTGGAAAGGGGTACAGCCACTCGACAGGAAAGAGACCCGGGACAATCTGCCGACCCGGGTTCACCGGCTCTCCGAGGGCGAGAGTCCGCGCGGCTGGTGGGGCGCGTATCTGCCAGTGATTCGCCGTTGGGAAAGGGTTCTCAAACGCCCTGCCCCACCCGCTGTTTCACTGACGCGCCGTTCGGTGTACCGGCTGGACCCGGGCTTTGTCGAATGGCTCATGGGGCTACCCGATAGGTGGGTCACCGGAATTCCGGGACTCAGCCGCTCGCGACGACTGCAAGTCCTCGGTAACGGAGTCGTTCCGCAGCAAGCACATGCGGCATACGCGTATCTAATGGGAGGTGATGACGGTACCTCTGAAGCGGAAGAGCGGGAACCGGGCCATTCTTGACCGGGGTTCCGGTAGTTGGTTGAAGTACCCCGGATCGAATACCCCCCGGAGATTTACAGGGGCTTGGCCGCGCCACGGGACGACCCATGCAGGAATCATGTCCGAACGGTGGGGGCTCGAACCCCCGGTAGTCGAACCGGGCTTTTCTGAGATGCCGCTGCTGCCGACCCCCACCGCATCGGATGCCGTGCGTGGACCAGATTTCGCAAAGGCGGACCGCGAGGGGGCCGGGGGCGATGATCTCGTGACCACGGTTGCCCGGCTTTTCGACAAGGAACGGGCCCACCGGCTTTTCAAGACACCGACCGCGAACCTCGGCAGCAACGGGGCGTCACAGCACCCGGATAAGCGCCGTGCGGGTGGCCACGGGCCGACGCTGGACGATGAAGTCTCGTTCCTGCTGCCGGTAGACCCGGACACCGCCGAGGAACAACTCGGAGCCTTTCACTCACCCCCGGAATGGTGGGCCGAATATGGGCCGGCTGTGCGCCGCTGGGAAACCCTCATGGGCACCCCCGCACCGATCCCAGTCGAATTCGGTCCTCGCGGTGGTCGACGGCTCGCAGCGGTGTTCGCAGAATGGCTCATGGGGCTACCCCGGGGGTGGATCACCCATATCCCGGGACTCAACAGGGCCCGGCAACTCAAAGCGGCAGGAAACGGAGTCGTGGCGCGACAGGCGTTCACGGCCTATCTGCACATGATCAATCACAAGGGGGATGAATGGGAAAGCGGGGCGTGATCTCTGATTACGCGGGCGAGGAACTGTACCGGGGTGACCTGATCAGCTACTCGGCGCGCCAGGGAAACCGGGTGCGGCAGGCAGACGGAATTATCCTAAAGTCCACTACTCGACTGGTAGATGGGCGGCTCCGGGCAATGCTGCTCGTCCAGCCGACCGGAGTTGAGTCCGGGTTCGTCAAGCGGCGCTCTCTGCGCAAGGAATGGGTGTCGACCGAGCATGTACGGCTCATCACTCCGGACGTGACCGGAGAGCGGCACCAGTAGCAGCCACAACAGGGGCCGGGCGACCAATGGTTGTCCGGCCCCTTTCGTATGGGGGAAACATGATCTACGAAATCAGCGCCGAGGACGCTCCGCCCCTCGGAGACATCCGGGAAGCGTGCGCGGGCGACACGATCTTTCTCATGCCGGATTGGCGCGAGCGGGACGACTGGACTCGCTATTTGGATGCGGTCGCGCACGCCATGGCCCGGGGTGCCGTGATCCACCAGGGGGCCAACTGTGGCTAATCCCAACAAGGCCAAGGGAACGGCATGGGAATCGGCGGTTCGGGACTACTTGAATGGCGCTCACGGGCTCGTTGATGAATCTGGGGCACTCCGGGACCCGTTCAACCCGATGAACATCCGTCGAGTAGCACAGGAAGGCTCTAAGGACATAGGGGATATCCACGCGGTCCCGTTCATTCTCGAATGCAAGGACGTTAAGAATCCCGCCGTGCCGACATGGCTCCGGCAGGCTGAGAAGGAAGCGCGGCACGCGCACTTCCCGTACGGGGTGGTGGTCGCCAAGGTTCGCGGGAAGGGCACGGCTGCCGGACGGGCCCACTTTGACGTACGTACGTGGACCAGGGTCCGTACCGCCCTCGGACTGCACCCGCGGGAAGCAGCGGACTTGTACGGCGTGACCGTGTCCGCTCGCGGGCTCAATACCGGCCGGTGGTACATCACGGTCCCGCTCGCTCGGTTCGCCGTACTGCTCGCGGACATGCGGGGGGTGTTCCGTGAGGTTCGCTGATCTGCTCGCCCGGTTCACCGGGGTCACAGACCAGCCGGACGGAGGGTACGCGGCACTCTGCCCCGCGCACGCTGACAGTCGCCCGTCCCTGCGGATATGGAGGGGCGAGGACAACAAGGTTCGCGTGCACTGCCGAGCCGGCTGTTCCGCGGACGCGGTGGTCAAGGCTGCTGGGCTCGACTGGTCCGCGCTGTTCGATGCCACCGGCCCCGGAGCGACCGTTCCGGCCGGACGCGCCGAGCTGGTCCCGGCGAGACTGGTCGCCGGTCTCGCTGCCTATGTGGACCGGTGCTCGCTCGCCCTCGGCGACTACTCCGACGAGTGGGCCGAGCGGGCACGGGACTACCTCTACGCCCGGTTCGGCCTCACGCCTGAGGCTGCCGCGGAACTACGTATCGGGCTCGATGCCGACCAGGGCGACGACCAGGGCGAACGGTTCCCGTATCTCTCCCGTGCCTACCGGGCTCACCCCCGGATCACGGTCCCGCTCTGCGGGTGGGCCGGGACCGCCCGGGGTCTACAGGGTCGGGACATCGGCGGGGACTGCCCCGCACGGTGGCTCTCGCTGGTCAACCCCAAGGGTCACCGCTGGACCCCGTGGGGCGTGTTCCGTGGCGGGGGCGGATACGGAACGGTCCTGATCTGCGAGGGGCCCGGGGACGCTCTCACCGCAGTGTCATGCGGATACGACGCGGTGGCCATCCGGGGCGCGTCCCTCGCCGGCTCGGCCGAGCTGGTGCAGGAACTTGCCGAGGGGCTACGCGGGTCGCTGGTCATCCTCTGCGGGGACAACGATCGGTCCGGGAACGGGTTCACGGCCAAGCTCGCGGCCGGTCTCGCCGAGCACGGGATAGACGCTCTTGCACTTGAACTTCCCCGATCTGGATGGGACTTGACCGATTGGCGCGAGGACGACCCGGACGGGTTCCCCGCAGCACTGCACCGCGCAGTGAAGGAAGCCCGACCCGTCCGGGACAGTGCCGAGCTGGTCGACGCTGCCCGTACCGCCGAGTTGGCCGAGCGGACCGGGGCGGAGTCGGTCACCCGGGACCAGGGGGCCGAGGCTGCCGAAATCCTCGCTCGACTCGTTGGGCAGCTCGGCGAGAGCGACGCAATGAATGCCCACGCTCTCACGGCTTTCTGCGGGGGCCGAATACGGTACGCCCCGGGACTCGGTTTCTACACGTGGAACGGGCGGGTGTGGGGCCGCTCAGACACCAGGGTCCGGCAGGAAATCCACCGCATGGGGGCCGCTCTCGTCCTCGCAGGGCAGACACAAGCCGCACGGGGTTTCACGATGACATCCCGGATTGACGCGCTGATGACTGAACTGAAATCCGTGCCGTCCGTCCGAGTCAACGCATCCGATTTCGACAACCGCCCCGATCTGCTCGGATTCCGTAACGGGGTGGTCGATCTGCGGACCGGGGTTCTCCGCTCTCACGATATGCGGGACATGCTCACGCACGGGCTCGCGGTCGAATACCACCCGGACGCAGAGTGCCTCCGTTGGGAGTCGTTTCTAGAGGAGATTTTCCCACGTTCCCCGGAGCTGCCCGCCTACGTTCAAAGGCTGGTCGGTTACGGGATCACCGGTCACGTTTCGGAGCAGATCTTTGCGGTCCTGTGGGGGAAGGGTGCCAACGGCAAGAGTGTCCTTATCGACGCGTTGATAGAGGTGTTCCGAGAGATCAGCAAAACCACGCCGTTTGCCACCTTTGAAGCGAAGAACACCGGGGGCATCCCAAATGACATTGCGGCATTGAGGGGTGCGCGTTTCGTCATGGCATCCGAGGGCGAGAGCGGGGCCCCAATGTCGGAAGCGATCCTAAAGCGCGTCACCGGTAAGGACATGATCAGTGCGCGCTATCTCCGGCGAGAGTTTTTCGAGTTCAAGCCGTCCTTTTTGCTGCTGTTGGCGACGAATCACAAGCCTAAGTTCAAGTCCCAGGATGAGGGGCTTTGGCGGCGCGTGAAGTTGCTGCCTTTCCTGCGGACGTTTGAGCCCGATGAGCGGGATTACGAACTGGACGCGAAATTACGGCGAGAAACCGAGGGGATCGCGGCATGGGCGGTGCGTGGGGCGGTCGAGTGGTACCGGTCCGGCCTACAGGACCCGCAGGTCATCGCGGGTGCGAGCCGCGAGTATCGCGAAACGAGTGACCAGCTTGCCGGCTTCTTTCCCGGGGTGCTCGAAAGGGGCTCTGAGGACGATGTCATGAACGGCACCGAAGCATTCAACAGATACTTGGACTGGTGCGAGGAAGAGAATTTGCCCGCCCGGGAACGCTGGACGCGGCGCGCCTTTTACGACGCAATGGAAGAGCGCGGCCTATACCGACGCAAGACCATGAAGGGAATCGCCCTGGTTGGGCTCCGACTTGCCGAGGACACTCCCGACCCGCAGGGGCCGGGCATCTTCGGTACGTCCTGAAGCAGGGCTGCCTCCAAAACGGAGGTGGCCCCCTTTCAGGCGTATGCAAACCTTTCACCACCCGGTGGCCGGGGACCGCGTCACCATACGCGTACCGGAGACCACAGACGACCTAGGCGCATTCTGGGAGTGGCTTTCCAAAGCACGCGCCCGGGGACCTATAGCGGTCGACACGGAGACGACCGGACTCCGGATCTACTCAACCGGCTACGGGCTCCGTACCGTGCAGTTCGGCGACGCGCATGACGCGTGGGTCCTGCTCTACGAGCGGGGCGGAGAACACGCGCACTACGCCCGGGAAGCGCTCCGCCGATGCCGGGACATCCATATTCACAATGCGATGTTTGATTGGCTGGTCCTAGACCGGCACGCGGGCATTCCCTTGGAAAACCTCGCACCGGTCACGACAGACACGCGCATCCTCGCCACCCTCATTGACCCCCGCGCACCTTTCGGGGGCGGAGTCGGGACCGGCCTCAAGCCTCTTTCGGCAAAGTGGATCGACCCTGCCGCGCCGGATACGCAAGGCGGGCTCACGGCGGTTTTCCGGTCCCTCGGTCTCACGAAAGAGACCGGGTGGGCGGGTATTCCGCTAACGCATCCCACCTTTTTGCTTTACGCAGGGCTGGACGTGATTTTCACGGCACGGCTCGCACCGATCCTCCGAGCCGAGCTGGAACGGCTATCCGTCCGTCCCGCCCTGGTCCCCTATGAACACACCATCGCTCGCATCTGCGCCGTGATGCAGCGGGCCGGGTTGCTGGTGGACCGGGAGTACGCCGAACCCCTCGCGGGCCGGCTCACCGAGGATGCCGAGCGGTACGGGGCGGTTGCAGCCCGGTACGGGGTGTCCTCGGTCAACAGCTCGGCGCAAGTGGCGGACGCTCTCACGGGCATGGGCGAGCGGCTGACGGAGCGCACCGACTCCGGGGCATGGAAGACAGATAAAGCTGTGTTGCTGCCGCTCGCCGATCTGGACCGGGATTGGCAGCGCATCGGGGCCCGAGACCCCAACCCCCTCGCCGATGCGGTGCTCAGAGCGAAACGCGCGGGAAAGTGGGGCACGGCGTACGCGCAAGCGTTTCTAGAGAATGCCGATGCCGACAGTCGCATTCACCCGGTAATAGCCCCGCTCGCCGCACGCACGGGCCGGATGAGTGTCACGGACGGGTTGCACCAGCTACCGAGTTCCGATCACATCATCCGGCGCGCGATCCTCGCCGAGCCTGGACACGTCATGATCAGCACTGATTTCCAAGCCGTAGAAATGCGCGTCCTCGCTGCCCTCGCCAAAGTACGCCGGATGATTGATGGATTCGTGAACGGCGGGTCCGAATTCGATATCCACATGTTCACCGCGCAGCTTATCAAGGGCGCGGGCGCAACCACCAAAGAACGGAAACTTTTCAAGGGTGCGGGATTCGGAAAAGTCTACGGCGGCGGGATCACCACCATTGCCCGACAGACCGGAGCCCCTGAATCGGAGATTGCGCAAGCGGTTGCAGAGTACGACCGCGTCTTCCCCGAGATTAAACGGGCGTCCTCACGGTGGCAGCGGCAGGCGTTTCAGAATGGAATGGTATTCATCTCGGCGACCGGCCGCCGGCTGCCGCTCGACCGGGACCGAACCTATTCCGTGGTCAACTACGCCTGCCAGTCAGCGGCTCGCGATCTGCTCGGACAGGCATTGATCAACGCCTCAGAATCTGGGCTGCTCGACTATTGCCGTCTGCCTATTCATGACGAAATTCTCGCGTCGGCTCCCCGCGAGGACGCCACCGAGATTGCCCGCGAGTTCGAGCGCTGCATGACCACGGATCTTTACGGCGTTCCGATCACTGCTGACGCCGAAATCGGCGGACGATCTTGGGGCAGCCTCTATGGAGCCGACCACTAA

Protein sequences of DBSCAN-SWA_3

>NZ_CP042266|6516469:6527340|6522493_6523009_+|WP_146483090.1|DBSCAN-SWA
MANPNKAKGTAWESAVRDYLNGAHGLVDESGALRDPFNPMNIRRVAQEGSKDIGDIHAVPFILECKDVKNPAVPTWLRQAEKEARHAHFPYGVVVAKVRGKGTAAGRAHFDVRTWTRVRTALGLHPREAADLYGVTVSARGLNTGRWYITVPLARFAVLLADMRGVFREVR
>NZ_CP042266|6516469:6527340|6516469_6516757_+|WP_146483082.1|DBSCAN-SWA
MNRDPTSRPGSEDEPLGVVSIGAREIYDAVVGLREDVRSLGEQGESVEETLADHETRIRGLESERGKFVLPAALITAVATVVAAGLAVAKVAGGP
>NZ_CP042266|6516469:6527340|6520257_6520758_+|WP_146484650.1|DBSCAN-SWA
MPILELCAGYGGIGRAVEALTGDRVRYVAEIDPYASLILEKRYPGAPNIGDITQFDWGTLRGRVDIVTAGFPCQDISNAGKRVGIHGERSGIWQHVAASIRVLRPRFAFLENVSAIRSRGLDVVAADLAKIGYDLRWCCLRASAVGAPHMRDRWFGIATLSDSEKV
>NZ_CP042266|6516469:6527340|6516833_6517610_+|WP_146483083.1|DBSCAN-SWA
MAKFTGAEWRPIPINHTPGGQDSVRGVVIHIMAGTLVGTDSWFRNPKARASSHFGTGKGGKCYQWVSTADRAWAQGNGNRDWLSIENEGKGGDALTSEQIDRCAEILAWAHKRYGVPLAVATSPTGRGLGYHAMGGKAWGSHPACPGVRIIAQLPEILRRAAALVGDKPKPKPPVGKYAAFPGAAFFRSSPRSPLVTAMGRRLVAEGCGRYASGPGPQWTESDRKSYAAWQRKRGYSGADADGWPGKTTWDALRVPRV
>NZ_CP042266|6516469:6527340|6522315_6522501_+|WP_146483089.1|DBSCAN-SWA
MIYEISAEDAPPLGDIREACAGDTIFLMPDWRERDDWTRYLDAVAHAMARGAVIHQGANCG
>NZ_CP042266|6516469:6527340|6517710_6517905_+|WP_146483084.1|DBSCAN-SWA
MPFIATHPARVYAVAAASLALVVHYVPDLPSALVLGLVGAVLGLGETVQRAEDRKTSRAGEGDA
>NZ_CP042266|6516469:6527340|6519544_6520240_+|WP_146483087.1|DBSCAN-SWA
MSLRIFETDPDAMPKGSFSDDTVGRFHGGKQVDNLPVALSEWRVTTGDPEVADAIAQLMGGSPVETDSTSENFIEIMTDREKVQVVLSGPDAIASDLKLWNGNTLIHHCDGVEFLSPDEDRGKACGCPALMEDRKAAAKAKRGPSPSISVTFRIAEDYDLGMFRLQTGSWKLAEVLHEIENALNKVGSEALCTLELELVEYTTKKGRDVSYRKPVIRVLKSWSDAVADPAH
>NZ_CP042266|6516469:6527340|6522995_6525443_+|WP_146483091.1|DBSCAN-SWA
MRFADLLARFTGVTDQPDGGYAALCPAHADSRPSLRIWRGEDNKVRVHCRAGCSADAVVKAAGLDWSALFDATGPGATVPAGRAELVPARLVAGLAAYVDRCSLALGDYSDEWAERARDYLYARFGLTPEAAAELRIGLDADQGDDQGERFPYLSRAYRAHPRITVPLCGWAGTARGLQGRDIGGDCPARWLSLVNPKGHRWTPWGVFRGGGGYGTVLICEGPGDALTAVSCGYDAVAIRGASLAGSAELVQELAEGLRGSLVILCGDNDRSGNGFTAKLAAGLAEHGIDALALELPRSGWDLTDWREDDPDGFPAALHRAVKEARPVRDSAELVDAARTAELAERTGAESVTRDQGAEAAEILARLVGQLGESDAMNAHALTAFCGGRIRYAPGLGFYTWNGRVWGRSDTRVRQEIHRMGAALVLAGQTQAARGFTMTSRIDALMTELKSVPSVRVNASDFDNRPDLLGFRNGVVDLRTGVLRSHDMRDMLTHGLAVEYHPDAECLRWESFLEEIFPRSPELPAYVQRLVGYGITGHVSEQIFAVLWGKGANGKSVLIDALIEVFREISKTTPFATFEAKNTGGIPNDIAALRGARFVMASEGESGAPMSEAILKRVTGKDMISARYLRREFFEFKPSFLLLLATNHKPKFKSQDEGLWRRVKLLPFLRTFEPDERDYELDAKLRRETEGIAAWAVRGAVEWYRSGLQDPQVIAGASREYRETSDQLAGFFPGVLERGSEDDVMNGTEAFNRYLDWCEEENLPARERWTRRAFYDAMEERGLYRRKTMKGIALVGLRLAEDTPDPQGPGIFGTS
>NZ_CP042266|6516469:6527340|6521971_6522256_+|WP_146483088.1|DBSCAN-SWA
MGKRGVISDYAGEELYRGDLISYSARQGNRVRQADGIILKSTTRLVDGRLRAMLLVQPTGVESGFVKRRSLRKEWVSTEHVRLITPDVTGERHQ
>NZ_CP042266|6516469:6527340|6518622_6519459_+|WP_146483086.1|DBSCAN-SWA
MPGAIRTIKRGGSRFYIHPSTSEKVPGVTSIVGMLPKPYLTFWAARMTAETAVENLDAVRSIAERDPAGAVDFLRNAHVRYTNLRAKVGSQAHDLFERMIRLEEIGRVHPDMEPYRLGFAEFLTAVRPELIHAEDVCWSDEHGYAGSFDAIVRVRLGADGKPDHENGEWHTLLVDWKTSKSAYPDVALQLAAYANADRVISPDGTSKPMPKVDGAAVLHITPEGWVFKPVRIDSEIFNVFLTLRHVFHWDRDLSKTVFGVPIAESVRRLITGTQRRAA
>NZ_CP042266|6516469:6527340|6517901_6518486_+|WP_146483085.1|DBSCAN-SWA
MSYRHVALIGRAGSGKDTVGEHLVARFQFFRVAFADPLKTLALDLDPIVSNEPTGYGPLSLRLSDVVRRDGWDRAKQLPEVRRLLQRTGQALRDRDPDVWLRPLLDKITVADRWNVPVVITDVRYRNEADALRKRGALLVQVDRPGEHDHQPDQDQREHRSETELRDFPADAVLTNGGTVAELHALADQLAVRR
>NZ_CP042266|6516469:6527340|6521492_6521990_+|WP_146484651.1|DBSCAN-SWA
MTTVARLFDKERAHRLFKTPTANLGSNGASQHPDKRRAGGHGPTLDDEVSFLLPVDPDTAEEQLGAFHSPPEWWAEYGPAVRRWETLMGTPAPIPVEFGPRGGRRLAAVFAEWLMGLPRGWITHIPGLNRARQLKAAGNGVVARQAFTAYLHMINHKGDEWESGA
>NZ_CP042266|6516469:6527340|6525486_6527340_+|WP_146483092.1|DBSCAN-SWA
MQTFHHPVAGDRVTIRVPETTDDLGAFWEWLSKARARGPIAVDTETTGLRIYSTGYGLRTVQFGDAHDAWVLLYERGGEHAHYAREALRRCRDIHIHNAMFDWLVLDRHAGIPLENLAPVTTDTRILATLIDPRAPFGGGVGTGLKPLSAKWIDPAAPDTQGGLTAVFRSLGLTKETGWAGIPLTHPTFLLYAGLDVIFTARLAPILRAELERLSVRPALVPYEHTIARICAVMQRAGLLVDREYAEPLAGRLTEDAERYGAVAARYGVSSVNSSAQVADALTGMGERLTERTDSGAWKTDKAVLLPLADLDRDWQRIGARDPNPLADAVLRAKRAGKWGTAYAQAFLENADADSRIHPVIAPLAARTGRMSVTDGLHQLPSSDHIIRRAILAEPGHVMISTDFQAVEMRVLAALAKVRRMIDGFVNGGSEFDIHMFTAQLIKGAGATTKERKLFKGAGFGKVYGGGITTIARQTGAPESEIAQAVAEYDRVFPEIKRASSRWQRQAFQNGMVFISATGRRLPLDRDRTYSVVNYACQSAARDLLGQALINASESGLLDYCRLPIHDEILASAPREDATEIAREFERCMTTDLYGVPITADAEIGGRSWGSLYGADH

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_146483082.1|6516469_6516757_+	hypothetical protein	A0A2H5BLH6	Streptomyces_phage	3.7e-14	59.8
WP_146483083.1|6516833_6517610_+	N-acetylmuramoyl-L-alanine amidase	A0A1J0MCQ0	Streptomyces_phage	3.6e-88	62.0
WP_146483084.1|6517710_6517905_+	hypothetical protein	NA	NA	NA	NA
WP_146483085.1|6517901_6518486_+	hypothetical protein	A0A2H5BLS8	Streptomyces_phage	9.1e-44	48.2
WP_146483086.1|6518622_6519459_+	hypothetical protein	K4HZ42	Streptomyces_virus	7.3e-87	58.3
WP_146483087.1|6519544_6520240_+	hypothetical protein	K4I334	Streptomyces_virus	6.7e-62	52.3
WP_146484650.1|6520257_6520758_+	DNA cytosine methyltransferase	Q858Z2	Streptomyces_virus	5.7e-55	60.8
WP_146484651.1|6521492_6521990_+	DNA (cytosine-5-)-methyltransferase	A0A1D8ETM2	Propionibacterium_phage	1.8e-16	55.3
WP_146483088.1|6521971_6522256_+	hypothetical protein	A0A2H5BLT8	Streptomyces_phage	8.6e-24	57.6
WP_146483089.1|6522315_6522501_+	hypothetical protein	NA	NA	NA	NA
WP_146483090.1|6522493_6523009_+	hypothetical protein	A0A2H5BLF2	Streptomyces_phage	3.8e-46	56.4
WP_146483091.1|6522995_6525443_+	hypothetical protein	A0A2H5BLZ0	Streptomyces_phage	7.6e-302	63.4
WP_146483092.1|6525486_6527340_+	DNA polymerase	K4HYK3	Streptomyces_virus	3.8e-245	68.6