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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP042330 Euhalothece natronophila Z-M001 plasmid pEu4, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP042328 Euhalothece natronophila Z-M001 plasmid pEu2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 2 crisprs cas1,cas2,csx1,csm3gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL 0 20 0 0
NZ_CP042329 Euhalothece natronophila Z-M001 plasmid pEu3, complete sequence 0 crisprs cas14j 0 0 0 0
NZ_CP042326 Euhalothece natronophila Z-M001 chromosome, complete genome 9 crisprs cas14j,DinG,Cas14c_CAS-V-F,Cas14u_CAS-V,c2c9_V-U4,RT,csa3,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm6,cas3,c2c5_V-U5,WYL,cas14k 2 3 5 0

Results visualization

1. NZ_CP042327
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042327_1 39246-39889 TypeIII NA
8 spacers
cas2,cas1,csx1,csm3gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042327_2 52227-53166 TypeIII NA
12 spacers
WYL,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas2

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP042327_1 1.1|39282|40|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 39282-39321 40 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 39282-39321 0 1.0
NZ_CP042327_1 1.2|39358|45|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 39358-39402 45 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 39358-39402 0 1.0
NZ_CP042327_1 1.3|39439|40|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 39439-39478 40 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 39439-39478 0 1.0
NZ_CP042327_1 1.4|39515|38|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 39515-39552 38 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 39515-39552 0 1.0
NZ_CP042327_1 1.5|39589|37|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 39589-39625 37 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 39589-39625 0 1.0
NZ_CP042327_1 1.6|39662|39|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 39662-39700 39 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 39662-39700 0 1.0
NZ_CP042327_1 1.7|39737|39|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 39737-39775 39 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 39737-39775 0 1.0
NZ_CP042327_1 1.8|39812|42|NZ_CP042327|CRISPRCasFinder,CRT 39812-39853 42 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 39812-39853 0 1.0
NZ_CP042327_2 2.1|52263|35|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 52263-52297 35 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 52263-52297 0 1.0
NZ_CP042327_2 2.2|52334|35|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 52334-52368 35 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 52334-52368 0 1.0
NZ_CP042327_2 2.3|52405|35|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 52405-52439 35 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 52405-52439 0 1.0
NZ_CP042327_2 2.4|52476|37|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 52476-52512 37 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 52476-52512 0 1.0
NZ_CP042327_2 2.5|52549|37|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 52549-52585 37 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 52549-52585 0 1.0
NZ_CP042327_2 2.6|52622|38|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 52622-52659 38 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 52622-52659 0 1.0
NZ_CP042327_2 2.7|52696|38|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 52696-52733 38 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 52696-52733 0 1.0
NZ_CP042327_2 2.8|52770|44|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 52770-52813 44 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 52770-52813 0 1.0
NZ_CP042327_2 2.9|52850|42|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 52850-52891 42 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 52850-52891 0 1.0
NZ_CP042327_2 2.10|52928|37|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT 52928-52964 37 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 52928-52964 0 1.0
NZ_CP042327_2 2.11|53001|37|NZ_CP042327|CRISPRCasFinder,CRT 53001-53037 37 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 53001-53037 0 1.0
NZ_CP042327_2 2.12|53074|57|NZ_CP042327|CRISPRCasFinder,CRT 53074-53130 57 NZ_CP042327 Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence 53074-53130 0 1.0

1. spacer 1.1|39282|40|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

ccgtaggacaagggttgaggtatgtataggttaggatggg	CRISPR spacer
ccgtaggacaagggttgaggtatgtataggttaggatggg	Protospacer
****************************************

2. spacer 1.2|39358|45|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgaatgtacatattggtctcctttgattattaatggtcaactag	CRISPR spacer
ctgaatgtacatattggtctcctttgattattaatggtcaactag	Protospacer
*********************************************

3. spacer 1.3|39439|40|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

ccccgtgctagaagtcggtttaactgggactcagacagga	CRISPR spacer
ccccgtgctagaagtcggtttaactgggactcagacagga	Protospacer
****************************************

4. spacer 1.4|39515|38|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgactttaggtttatccccttgaaagacgttgataaa	CRISPR spacer
ttgactttaggtttatccccttgaaagacgttgataaa	Protospacer
**************************************

5. spacer 1.5|39589|37|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

aaatgtcagacatagtgtcctccgattgaattcatca	CRISPR spacer
aaatgtcagacatagtgtcctccgattgaattcatca	Protospacer
*************************************

6. spacer 1.6|39662|39|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtgcttgcattttaagtgacctcgaattcgtcactta	CRISPR spacer
ttgtgcttgcattttaagtgacctcgaattcgtcactta	Protospacer
***************************************

7. spacer 1.7|39737|39|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

tggtaaatggaaagataataacacttctctaaagaagaa	CRISPR spacer
tggtaaatggaaagataataacacttctctaaagaagaa	Protospacer
***************************************

8. spacer 1.8|39812|42|NZ_CP042327|CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

tagagggacactacataggaggaattaaaacttgagagagtt	CRISPR spacer
tagagggacactacataggaggaattaaaacttgagagagtt	Protospacer
******************************************

9. spacer 2.1|52263|35|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

tcctttctccagtaattggaagccttctgtctgaa	CRISPR spacer
tcctttctccagtaattggaagccttctgtctgaa	Protospacer
***********************************

10. spacer 2.2|52334|35|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

ttctagaacagtaccaaactcatcatcgctccaat	CRISPR spacer
ttctagaacagtaccaaactcatcatcgctccaat	Protospacer
***********************************

11. spacer 2.3|52405|35|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

acatatctgacgttgtagattgatgcagggactcg	CRISPR spacer
acatatctgacgttgtagattgatgcagggactcg	Protospacer
***********************************

12. spacer 2.4|52476|37|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

aagaggtcttctgttccagcctctttgtgagctttta	CRISPR spacer
aagaggtcttctgttccagcctctttgtgagctttta	Protospacer
*************************************

13. spacer 2.5|52549|37|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

ttctttgggatttagacttgtgttctttttcagtcgc	CRISPR spacer
ttctttgggatttagacttgtgttctttttcagtcgc	Protospacer
*************************************

14. spacer 2.6|52622|38|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgaatttggcaatgaagtcaccagaccgctctggctt	CRISPR spacer
ctgaatttggcaatgaagtcaccagaccgctctggctt	Protospacer
**************************************

15. spacer 2.7|52696|38|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

cttagaagaccctaaggagaatggcttagctcccttta	CRISPR spacer
cttagaagaccctaaggagaatggcttagctcccttta	Protospacer
**************************************

16. spacer 2.8|52770|44|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

ttcttagcttcctgattaactttatttacatcagcattgttgta	CRISPR spacer
ttcttagcttcctgattaactttatttacatcagcattgttgta	Protospacer
********************************************

17. spacer 2.9|52850|42|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

atccttagtcaacccatcaggggcattaatccgactaccgct	CRISPR spacer
atccttagtcaacccatcaggggcattaatccgactaccgct	Protospacer
******************************************

18. spacer 2.10|52928|37|NZ_CP042327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

aggtttacgcgattagttagcttgatgaaatctttca	CRISPR spacer
aggtttacgcgattagttagcttgatgaaatctttca	Protospacer
*************************************

19. spacer 2.11|53001|37|NZ_CP042327|CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

tacatctgtgtgttaggcttgctagacttaatataat	CRISPR spacer
tacatctgtgtgttaggcttgctagacttaatataat	Protospacer
*************************************

20. spacer 2.12|53074|57|NZ_CP042327|CRISPRCasFinder,CRT matches to NZ_CP042327 (Euhalothece natronophila Z-M001 plasmid pEu1, complete sequence) position: , mismatch: 0, identity: 1.0

cccctaacgagcaccagactcgatttacaggggcgaggactacttcctcatccttct	CRISPR spacer
cccctaacgagcaccagactcgatttacaggggcgaggactacttcctcatccttct	Protospacer
*********************************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP042326
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042326_1 235912-236006 TypeV NA
1 spacers
cas14j

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042326_2 244909-244988 Orphan NA
1 spacers
cas14j

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042326_3 534434-535189 TypeIII NA
10 spacers
cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042326_4 543091-543352 TypeIII NA
3 spacers
csm6,cmr5gr11,cmr4gr7,cmr3gr5,cas10

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042326_5 708154-708332 TypeV-U5 NA
2 spacers
c2c5_V-U5

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042326_6 1788826-1789078 Orphan I-D,II-B
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042326_7 3019285-3019385 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042326_9 3209622-3209821 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042326_8 3208232-3208454 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP042326_1 1.1|235935|49|NZ_CP042326|CRISPRCasFinder 235935-235983 49 NZ_CP042326.1 235971-236019 2 0.959
NZ_CP042326_2 2.1|244933|32|NZ_CP042326|CRISPRCasFinder 244933-244964 32 NZ_CP042326.1 244877-244908 2 0.938

1. spacer 1.1|235935|49|NZ_CP042326|CRISPRCasFinder matches to position: 235971-236019, mismatch: 2, identity: 0.959

gcgctgttcaccaatctcaatcccacgctgttcaccgcgctgttcacca	CRISPR spacer
gcgctgttcaccaatctcaatcccacgctgttcaccacgttgttcacca	Protospacer
************************************.**.*********

2. spacer 2.1|244933|32|NZ_CP042326|CRISPRCasFinder matches to position: 244877-244908, mismatch: 2, identity: 0.938

taccaactctgataacaatagttacactagat	CRISPR spacer
taccaattttgataacaatagttacactagat	Protospacer
******.*.***********************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 MH517022 Acinetobacter phage SH-Ab 15599, complete genome 1301-1332 7 0.781
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 LR588166 Pseudomonas phage vB_PaeM_MIJ3 182613-182644 8 0.75
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 MH121069 Pseudomonas phage vB_PaeM_PA5oct, complete genome 11953-11984 8 0.75
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 MN871480 UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome 71061-71092 8 0.75
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 MT133560 Pseudomonas phage fnug, complete genome 212787-212818 8 0.75
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 DI373487 KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof 95144-95175 8 0.75
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 MN871489 UNVERIFIED: Pseudomonas phage PaZh_1, complete genome 102925-102956 8 0.75
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 NC_042081 Pseudomonas phage SL2, complete genome 73582-73613 8 0.75
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 KU521356 Pseudomonas phage KTN4, complete genome 213339-213370 8 0.75
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 MW057919 Pseudomonas phage vB_PaeM_kmuB, complete genome 212082-212113 8 0.75
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 NC_042060 Pseudomonas phage PA7, partial genome 95144-95175 8 0.75
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 AP019418 Pseudomonas phage PA02 DNA, nearly complete genome 12556-12587 8 0.75
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 NC_004629 Pseudomonas phage phiKZ, complete genome 213392-213423 8 0.75
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 MF360958 Salicola phage SCTP-2, complete genome 330104-330135 9 0.719
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 NZ_CP053834 Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence 97551-97582 9 0.719
NZ_CP042326_6 6.2|1788937|33|NZ_CP042326|CRISPRCasFinder,CRT 1788937-1788969 33 KJ452292 Staphylococcus phage 23MRA, complete genome 33445-33477 9 0.727
NZ_CP042326_6 6.2|1788937|33|NZ_CP042326|CRISPRCasFinder,CRT 1788937-1788969 33 AY508486 Bacteriophage 77, complete genome 9519-9551 9 0.727
NZ_CP042326_6 6.2|1788937|33|NZ_CP042326|CRISPRCasFinder,CRT 1788937-1788969 33 NC_005356 Staphylococcus phage 77, complete genome 9519-9551 9 0.727
NZ_CP042326_6 6.2|1788937|33|NZ_CP042326|CRISPRCasFinder,CRT 1788937-1788969 33 NC_048634 Staphylococcus phage P282, complete genome 9464-9496 9 0.727
NZ_CP042326_6 6.5|1788938|33|NZ_CP042326|PILER-CR 1788938-1788970 33 KJ452292 Staphylococcus phage 23MRA, complete genome 33445-33477 9 0.727
NZ_CP042326_6 6.5|1788938|33|NZ_CP042326|PILER-CR 1788938-1788970 33 AY508486 Bacteriophage 77, complete genome 9519-9551 9 0.727
NZ_CP042326_6 6.5|1788938|33|NZ_CP042326|PILER-CR 1788938-1788970 33 NC_005356 Staphylococcus phage 77, complete genome 9519-9551 9 0.727
NZ_CP042326_6 6.5|1788938|33|NZ_CP042326|PILER-CR 1788938-1788970 33 NC_048634 Staphylococcus phage P282, complete genome 9464-9496 9 0.727
NZ_CP042326_5 5.1|708192|32|NZ_CP042326|PILER-CR 708192-708223 32 NZ_LR215032 Mycoplasma gallopavonis strain NCTC10186 plasmid 2 344680-344711 10 0.688

1. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to MH517022 (Acinetobacter phage SH-Ab 15599, complete genome) position: , mismatch: 7, identity: 0.781

ccaatctttatttccatttttaatgaaatgca	CRISPR spacer
acactctttatttacatttttaatagatttca	Protospacer
 ** ********* **********..* * **

2. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to LR588166 (Pseudomonas phage vB_PaeM_MIJ3) position: , mismatch: 8, identity: 0.75

ccaatctttatttccatttttaatgaaatgca	CRISPR spacer
aatttttttatttccatttttaataaaatata	Protospacer
    *.******************.****..*

3. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to MH121069 (Pseudomonas phage vB_PaeM_PA5oct, complete genome) position: , mismatch: 8, identity: 0.75

ccaatctttatttccatttttaatgaaatgca	CRISPR spacer
aatttttttatttccatttttaataaaatata	Protospacer
    *.******************.****..*

4. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to MN871480 (UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome) position: , mismatch: 8, identity: 0.75

ccaatctttatttccatttttaatgaaatgca-	CRISPR spacer
gtcatctttatatccatttttagtg-attacat	Protospacer
 . ******** **********.** * *.** 

5. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to MT133560 (Pseudomonas phage fnug, complete genome) position: , mismatch: 8, identity: 0.75

ccaatctttatttccatttttaatgaaatgca-	CRISPR spacer
gtcatctttatatccatttttagtg-attacat	Protospacer
 . ******** **********.** * *.** 

6. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to DI373487 (KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof) position: , mismatch: 8, identity: 0.75

ccaatctttatttccatttttaatgaaatgca-	CRISPR spacer
gtcatctttatatccatttttagtg-attacat	Protospacer
 . ******** **********.** * *.** 

7. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to MN871489 (UNVERIFIED: Pseudomonas phage PaZh_1, complete genome) position: , mismatch: 8, identity: 0.75

ccaatctttatttccatttttaatgaaatgca-	CRISPR spacer
gtcatctttatatccatttttagtg-attacat	Protospacer
 . ******** **********.** * *.** 

8. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to NC_042081 (Pseudomonas phage SL2, complete genome) position: , mismatch: 8, identity: 0.75

ccaatctttatttccatttttaatgaaatgca-	CRISPR spacer
gtcatctttatatccatttttagtg-attacat	Protospacer
 . ******** **********.** * *.** 

9. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to KU521356 (Pseudomonas phage KTN4, complete genome) position: , mismatch: 8, identity: 0.75

ccaatctttatttccatttttaatgaaatgca-	CRISPR spacer
gtcatctttatatccatttttagtg-attacat	Protospacer
 . ******** **********.** * *.** 

10. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to MW057919 (Pseudomonas phage vB_PaeM_kmuB, complete genome) position: , mismatch: 8, identity: 0.75

ccaatctttatttccatttttaatgaaatgca-	CRISPR spacer
gtcatctttatatccatttttagtg-attacat	Protospacer
 . ******** **********.** * *.** 

11. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to NC_042060 (Pseudomonas phage PA7, partial genome) position: , mismatch: 8, identity: 0.75

ccaatctttatttccatttttaatgaaatgca-	CRISPR spacer
gtcatctttatatccatttttagtg-attacat	Protospacer
 . ******** **********.** * *.** 

12. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to AP019418 (Pseudomonas phage PA02 DNA, nearly complete genome) position: , mismatch: 8, identity: 0.75

ccaatctttatttccatttttaatgaaatgca-	CRISPR spacer
gtcatctttatatccatttttagtg-attacat	Protospacer
 . ******** **********.** * *.** 

13. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to NC_004629 (Pseudomonas phage phiKZ, complete genome) position: , mismatch: 8, identity: 0.75

ccaatctttatttccatttttaatgaaatgca-	CRISPR spacer
gtcatctttatatccatttttagtg-attacat	Protospacer
 . ******** **********.** * *.** 

14. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 9, identity: 0.719

ccaatctttatttccatttttaatgaaatgca	CRISPR spacer
aaaaactttatttccatttttaatgctaattt	Protospacer
  ** ********************  *  . 

15. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to NZ_CP053834 (Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence) position: , mismatch: 9, identity: 0.719

ccaatctttatttccatttttaatgaaatgca	CRISPR spacer
attttatttttttccattttaaatgaaattcg	Protospacer
 .  * *** ********** ******** *.

16. spacer 6.2|1788937|33|NZ_CP042326|CRISPRCasFinder,CRT matches to KJ452292 (Staphylococcus phage 23MRA, complete genome) position: , mismatch: 9, identity: 0.727

aaactgaaaaaagctatctcaaattgtggagta	CRISPR spacer
ggtttgaaaaaagctatatcaaattggggtaaa	Protospacer
.. .************* ******** ** . *

17. spacer 6.2|1788937|33|NZ_CP042326|CRISPRCasFinder,CRT matches to AY508486 (Bacteriophage 77, complete genome) position: , mismatch: 9, identity: 0.727

aaactgaaaaaagctatctcaaattgtggagta	CRISPR spacer
ggtttgaaaaaagctatatcaaattggggtaaa	Protospacer
.. .************* ******** ** . *

18. spacer 6.2|1788937|33|NZ_CP042326|CRISPRCasFinder,CRT matches to NC_005356 (Staphylococcus phage 77, complete genome) position: , mismatch: 9, identity: 0.727

aaactgaaaaaagctatctcaaattgtggagta	CRISPR spacer
ggtttgaaaaaagctatatcaaattggggtaaa	Protospacer
.. .************* ******** ** . *

19. spacer 6.2|1788937|33|NZ_CP042326|CRISPRCasFinder,CRT matches to NC_048634 (Staphylococcus phage P282, complete genome) position: , mismatch: 9, identity: 0.727

aaactgaaaaaagctatctcaaattgtggagta	CRISPR spacer
ggtttgaaaaaagctatatcaaattggggtaaa	Protospacer
.. .************* ******** ** . *

20. spacer 6.5|1788938|33|NZ_CP042326|PILER-CR matches to KJ452292 (Staphylococcus phage 23MRA, complete genome) position: , mismatch: 9, identity: 0.727

aaactgaaaaaagctatctcaaattgtggagta	CRISPR spacer
ggtttgaaaaaagctatatcaaattggggtaaa	Protospacer
.. .************* ******** ** . *

21. spacer 6.5|1788938|33|NZ_CP042326|PILER-CR matches to AY508486 (Bacteriophage 77, complete genome) position: , mismatch: 9, identity: 0.727

aaactgaaaaaagctatctcaaattgtggagta	CRISPR spacer
ggtttgaaaaaagctatatcaaattggggtaaa	Protospacer
.. .************* ******** ** . *

22. spacer 6.5|1788938|33|NZ_CP042326|PILER-CR matches to NC_005356 (Staphylococcus phage 77, complete genome) position: , mismatch: 9, identity: 0.727

aaactgaaaaaagctatctcaaattgtggagta	CRISPR spacer
ggtttgaaaaaagctatatcaaattggggtaaa	Protospacer
.. .************* ******** ** . *

23. spacer 6.5|1788938|33|NZ_CP042326|PILER-CR matches to NC_048634 (Staphylococcus phage P282, complete genome) position: , mismatch: 9, identity: 0.727

aaactgaaaaaagctatctcaaattgtggagta	CRISPR spacer
ggtttgaaaaaagctatatcaaattggggtaaa	Protospacer
.. .************* ******** ** . *

24. spacer 5.1|708192|32|NZ_CP042326|PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 10, identity: 0.688

ccaatctttatttccatttttaatgaaatgca	CRISPR spacer
aaaatctttatttcaatttttattgtcttaat	Protospacer
  ************ ******* **   *.  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 124005 : 175701 45 Cedratvirus(14.29%) protease,transposase NA
DBSCAN-SWA_2 955123 : 1003922 50 Tupanvirus(50.0%) protease,transposase,tRNA NA
DBSCAN-SWA_3 1865254 : 1874816 6 Bacillus_virus(60.0%) NA NA
DBSCAN-SWA_4 2569651 : 2617030 53 Bacillus_phage(40.0%) transposase NA
DBSCAN-SWA_5 3116227 : 3166177 46 Ralstonia_phage(16.67%) holin,transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage