CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP042325	Corynebacterium sp. sy039 chromosome, complete genome	2 crisprs	cas1,cas9,cas4,cas3,DEDDh,WYL,DinG	1	8	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042325_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042325_1

233207-234331

orTypeII

Consensus_repeat	Method
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	CRISPRCasFinder
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	CRT
TGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCT	PILER-CR
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	PILER-CR

17 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP042325_1

>merge|NZ_CP042325|1|233207-234331|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GCTGGAGGTCTATTCCCATTCCAGCTGATATACTTCCACCATCGTGACTAGGCACCTCGCCTCAGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCACGAGATAGCTCGAAATCTTGTTGAGGTGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTCTTAATCATTCTCGCTCTTGACTTTCTGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTTTGTTCAATGTGCTAGACAACACCATAGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTTACCATGCGTTCCCCCGCCATCGACTGGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCCGAGGCGGGAAATGCCGTCGGGATGCTTGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTCAAAGCAATTACGATGATTGGGGCAACGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCCCTTCTTCTGCACCGTTTTCAGCATCCAGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCACGACGATGACAACGAAGAGTTCGATGAGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCGCAAGATTGATTTTGCAACCTTTGAGCGGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCAAAATTATCAATTCCATCTACAGCCCATGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTACTGAAAAGCAGCATTACTTGGAATGAGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTCAAACGCGCGATTATTGATTCTGCCAGCGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTCTTGGAGCTCAGGTATTTCATCTTCCCGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTCACCAAGTTTCCTACACGGTAGAAGGTGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTGCCCTCGTGTCCGTCCCATTTAACTTCGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTGAGGTAGATGAGGGAACGGGGAAGTAAGCTGGGGATCTATTCTCATTCCAGCTGATATACTTC

>NZ_CP042325|1|1|233207-234331|CRISPRCasFinder
GCTGGAGGTCTATTCCCATTCCAGCTGATATACTTC	CACCATCGTGACTAGGCACCTCGCCTCA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	ACGAGATAGCTCGAAATCTTGTTGAGGT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCTTAATCATTCTCGCTCTTGACTTTCT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TTTGTTCAATGTGCTAGACAACACCATA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TTACCATGCGTTCCCCCGCCATCGACTG
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	CGAGGCGGGAAATGCCGTCGGGATGCTT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCAAAGCAATTACGATGATTGGGGCAAC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	CCTTCTTCTGCACCGTTTTCAGCATCCA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	ACGACGATGACAACGAAGAGTTCGATGA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	GCAAGATTGATTTTGCAACCTTTGAGCG
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	AAAATTATCAATTCCATCTACAGCCCAT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TACTGAAAAGCAGCATTACTTGGAATGA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCAAACGCGCGATTATTGATTCTGCCAGC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCTTGGAGCTCAGGTATTTCATCTTCCC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCACCAAGTTTCCTACACGGTAGAAGGT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TGCCCTCGTGTCCGTCCCATTTAACTTC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TGAGGTAGATGAGGGAACGGGGAAGTAA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC

>NZ_CP042325|1|1|233207-234331|CRT
GCTGGAGGTCTATTCCCATTCCAGCTGATATACTTC	CACCATCGTGACTAGGCACCTCGCCTCA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	ACGAGATAGCTCGAAATCTTGTTGAGGT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCTTAATCATTCTCGCTCTTGACTTTCT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TTTGTTCAATGTGCTAGACAACACCATA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TTACCATGCGTTCCCCCGCCATCGACTG
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	CGAGGCGGGAAATGCCGTCGGGATGCTT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCAAAGCAATTACGATGATTGGGGCAAC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	CCTTCTTCTGCACCGTTTTCAGCATCCA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	ACGACGATGACAACGAAGAGTTCGATGA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	GCAAGATTGATTTTGCAACCTTTGAGCG
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	AAAATTATCAATTCCATCTACAGCCCAT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TACTGAAAAGCAGCATTACTTGGAATGA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCAAACGCGCGATTATTGATTCTGCCAGC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCTTGGAGCTCAGGTATTTCATCTTCCC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCACCAAGTTTCCTACACGGTAGAAGGT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TGCCCTCGTGTCCGTCCCATTTAACTTC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TGAGGTAGATGAGGGAACGGGGAAGTAA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC

>NZ_CP042325|1|1|233271-233435|PILER-CR
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTCAC	GAGATAGCTCGAAATCTTGTTGAGGT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTC	TTAATCATTCTCGCTCTTGACTTTCT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTTTGTTCAATGTGCTAGACAACACCATAGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTTACCATGCGTTCCCCCGCCATCGACTGGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCCGAGGCGGGAAATGCCGTCGGGATGCTTGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTCAAAGCAATTACGATGATTGGGGCAACGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCCCTTCTTCTGCACCGTTTTCAGCATCCAGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCACGACGATGACAACGAAGAGTTCGATGAGCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	GCAAGATTGATTTTGCAACCTTTGAGCG
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	AAAATTATCAATTCCATCTACAGCCCAT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TACTGAAAAGCAGCATTACTTGGAATGA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCAAACGCGCGATTATTGATTCTGCCAGC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCTTGGAGCTCAGGTATTTCATCTTCCC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCACCAAGTTTCCTACACGGTAGAAGGT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TGCCCTCGTGTCCGTCCCATTTAACTTC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TGAGGTAGATGAGGGAACGGGGAAGTAA


>NZ_CP042325|1|2|233783-234331|PILER-CR
	GAGATAGCTCGAAATCTTGTTGAGGT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTC	TTAATCATTCTCGCTCTTGACTTTCT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTTTGTTCAATGTGCTAGACAACACCATAGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTTACCATGCGTTCCCCCGCCATCGACTGGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCCGAGGCGGGAAATGCCGTCGGGATGCTTGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCTCAAAGCAATTACGATGATTGGGGCAACGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCCCTTCTTCTGCACCGTTTTCAGCATCCAGCTGGGGATCTATTCTCATTCCAGCTGATATACTTCACGACGATGACAACGAAGAGTTCGATGAGCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	GCAAGATTGATTTTGCAACCTTTGAGCG
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	AAAATTATCAATTCCATCTACAGCCCAT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TACTGAAAAGCAGCATTACTTGGAATGA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCAAACGCGCGATTATTGATTCTGCCAGC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCTTGGAGCTCAGGTATTTCATCTTCCC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TCACCAAGTTTCCTACACGGTAGAAGGT
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TGCCCTCGTGTCCGTCCCATTTAACTTC
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC	TGAGGTAGATGAGGGAACGGGGAAGTAA
GCTGGGGATCTATTCTCATTCCAGCTGATATACTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042325.1\|WP_168195011.1\|232683_232827_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042325.1\|WP_144273751.1\|244782_245637_-\|phosphodiesterase	unknown	unknown	gnl\|CDD\|277347
NZ_CP042325.1\|WP_146340322.1\|234381_234687_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP042325.1\|WP_146338250.1\|245645_246686_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224525
NZ_CP042325.1\|WP_146338226.1\|225464_226274_-\|IS1595-family-transposase	unknown	unknown	gnl\|CDD\|226202
NZ_CP042325.1\|WP_146338246.1\|242860_243559_+\|C26-family-cysteine-hydrolase-domain-containing-family	unknown	unknown	gnl\|CDD\|153212
NZ_CP042325.1\|WP_146338244.1\|241134_242688_-\|amino-acid-carrier-protein	unknown	unknown	gnl\|CDD\|376500
NZ_CP042325.1\|WP_146338238.1\|232459_232687_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340963
NZ_CP042325.1\|WP_146338252.1\|246682_248374_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224099
NZ_CP042325.1\|WP_168195009.1\|227246_228773_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP042325.1\|WP_146338224.1\|225267_225468_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042325.1\|WP_146338240.1\|234706_235609_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP042325.1\|WP_144273754.1\|248374_249424_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP042325.1\|WP_146338248.1\|243555_244767_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP042325.1\|WP_146338232.1\|228998_229673_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224582
NZ_CP042325.1\|WP_146338236.1\|231525_231807_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042325.1\|WP_168195010.1\|232135_232294_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042325.1\|WP_146338228.1\|226528_227125_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP042325.1\|WP_146338234.1\|229887_230841_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381357
NZ_CP042325.1\|WP_146338242.1\|235633_238969_-\|CRISPR-associated-protein	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|375896

Protein	Function_ID	Function_description	E-value
NZ_CP042325.1\|WP_144273751.1\|244782_245637_-\|phosphodiesterase	gnl\|CDD\|277347	cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.4324e-57
NZ_CP042325.1\|WP_146340322.1\|234381_234687_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	9.12401e-18
NZ_CP042325.1\|WP_146338250.1\|245645_246686_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	6.49796e-63
NZ_CP042325.1\|WP_146338226.1\|225464_226274_-\|IS1595-family-transposase	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.93211e-10
NZ_CP042325.1\|WP_146338246.1\|242860_243559_+\|C26-family-cysteine-hydrolase-domain-containing-family	gnl\|CDD\|153212	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.	3.20447e-52
NZ_CP042325.1\|WP_146338244.1\|241134_242688_-\|amino-acid-carrier-protein	gnl\|CDD\|376500	pfam01235, Na_Ala_symp, Sodium:alanine symporter family.	1.43773e-163
NZ_CP042325.1\|WP_146338238.1\|232459_232687_-\|hypothetical-protein	gnl\|CDD\|340963	cd17405, MFS_SLCO6_OATP6, Solute carrier organic anion transporter 6 family of the Major Facilitator Superfamily of transporters. The Solute carrier organic anion transporter 6 (SLCO6) or Organic anion transporting polypeptide 6 (OATP6) family contains only one subfamily, OATP6A, which contains only one human member OATP6A1 (encoded by SLCO6A1). The OATP6 family is the most diverged of the OATPs. OATP6A1 is also called cancer/testis antigen 48 (CT48) or gonad-specific transporter. It is strongly expressed only in normal testis, and weakly in spleen, brain, fetal brain, and placenta. It is found in tumor samples (lung, bladder, and esophageal) and cancer cell lines (lung), and may be of potential use as a target for therapy for a variety of tumor types. The SLCO6/OATP6 family belongs to the Solute carrier organic anion transporter [SLCO, also called organic anion transporting polypeptides (OATPs) or Solute carrier family 21] family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0.00488793
NZ_CP042325.1\|WP_146338252.1\|246682_248374_-\|ABC-transporter-permease-subunit	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	1.53584e-63
NZ_CP042325.1\|WP_168195009.1\|227246_228773_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	5.25144e-98
NZ_CP042325.1\|WP_146338240.1\|234706_235609_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	3.88788e-82
NZ_CP042325.1\|WP_144273754.1\|248374_249424_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	3.24661e-141
NZ_CP042325.1\|WP_146338232.1\|228998_229673_-\|ABC-transporter-permease	gnl\|CDD\|224582	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism].	2.51766e-07
NZ_CP042325.1\|WP_146338248.1\|243555_244767_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.75699e-17
NZ_CP042325.1\|WP_146338228.1\|226528_227125_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.90505e-10
NZ_CP042325.1\|WP_146338234.1\|229887_230841_+\|aldo/keto-reductase	gnl\|CDD\|381357	cd19131, AKR_AKR5C2, Escherichia coli 2,5-diketo-D-gluconic acid reductase A (DkgA/YqhE) and similar proteins. Escherichia coli DkgA/YqhE is a founding member of aldo-keto reductase family 5 member C2 (AKR5C2). DkgA/YqhE (EC 1.1.1.274), also called 2,5-DKG reductase A, or 2,5-DKGR A, or 25DKGR-A, or AKR5C, catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG). It is also capable of stereoselective -keto ester reductions on ethyl acetoacetate and other 2-substituted derivatives.	9.33162e-126
NZ_CP042325.1\|WP_146338242.1\|235633_238969_-\|CRISPR-associated-protein	gnl\|CDD\|375896	pfam18470, Cas9_a, Cas9 alpha-helical lobe domain. This is an alpha-helical lobe domain found in Cas9 proteins. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. Amino acid residues located in both the nuclease and alpha-helical lobe clefts are highly conserved within type II-A Cas9 proteins.	6.90092e-79

>NZ_CP042325.1|WP_168195011.1|232683_232827_-|hypothetical-protein
MRYLSIIAGLSTVIYGIVKGINPSLTATLALAVGINAGIVLQSEAAK
>NZ_CP042325.1|WP_146338238.1|232459_232687_-|hypothetical-protein
MNPQIIDTDTGKLLWVTSQCAEHCGCSNGTFSSYVSRSIAPEPVGHFNRERLWDAEAVKEWHASRPGRGVRRSQG
>NZ_CP042325.1|WP_168195010.1|232135_232294_-|hypothetical-protein
MKIFTYAAEIICILAIIALHLSPWLVVLITIPLCFGLGYDTRKRVERHVSSN
>NZ_CP042325.1|WP_146338236.1|231525_231807_-|hypothetical-protein
MSKKTLNPGHVCGRSYVLPDSLEDMDGPTNGVVKLPNYLDWHTDDGFDLDEEEMIDTMYRTVLREALKVEDLRYLNHTLLRKIWRSIRIPPVL
>NZ_CP042325.1|WP_146338234.1|229887_230841_+|aldo/keto-reductase
MTATDKNAENIENAGNASSAGNATIALLDGTTIPQLGFGTWQLPGEVAYEATLAAIKTGYRHIDTAAIYGNEQEVGQAIAQAIAEGIVAREDLFVTTKLWNSDQAKAQEAMELSLEKLGLERVDLYLLHWPCPGYGKYVQAWESMIQLREAGKTTSIGVCNFYPEALDELIAVGETPVVNQIEVHPGFAQDTLRAENQARGIHTQAWSPLGQGKVLDNADIASIAEAHGKTAAQVIIRWHIQRGDIVLPRSSNAGRIAENFAVTDFVLDDAQMAAISALDRVTRENGAGAAGATDDSAIAGRIGPDPKDFNRGTPVE
>NZ_CP042325.1|WP_146338232.1|228998_229673_-|ABC-transporter-permease
MRTYFHITVADAAAEKIAVVGTDSAAFEQTSVADGQNPGIKISTLDSVDSATEQVLNGTIDAAVVKIERGYDLIARNHPGTLTINFANQSVEKIDRDNTLTSLGISPQNFEQSLTRSQVNIHTFGQDEEQSESEIQSITTVLIATGVMCYLIFLFAGNIGGRVTEEKASHVVEIILATIRPQDLLIGKIIADTIVGCAASGIILAASTIALRISGIMSSTVQAI
>NZ_CP042325.1|WP_168195009.1|227246_228773_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MTLGWGTKLGVIGENGAGKSTLLSLLAGEISPTSGLVDSSSKPAFVPQEKDLLRGDSLVSDEIAACLAPLYEIEEELNQASRELVAGDSGSLEKYSNALQRAEVQDVWSAPQRIERYLYGLGLESLSRRQRVDELSAGERRRLAMALTMVSRPEILLLDEPSNYLDEQSRIFLQDEIKNWEGIVIFVSHDREFLEKVPTGICDLDKSFSSQYLYRGAYRDYLKQKDDEINRWKERYANEQEEIRRLKHTVAVKAHQINHHRAMSDNNKKAYGARGDRVQSQISRRVRAARERLNQINRSSIPEPPQSLVMSIAPTKTPVPSSALLAQLRSVKVNKRSKRAITLDIASDDKIIVTGPNGSGKTTLLEIISGKLKPTQGSILKGNEVSIGYLGHEDLYCQDKRTAREIYDSSTPDAAPRLTSLGLLENVDMAACELSVGQRKRLELGILLQGDHDILLLDEPTNHLSLRLCEELIELLSTWPASVIIASHDPWVRSQHGWRIFSVVESAF
>NZ_CP042325.1|WP_146338228.1|226528_227125_-|TetR-family-transcriptional-regulator
MEDTVKKQRERIIDSAYTLALREGISALSVRKAAKEASIGASTLRYYFPSQDDLRVAVVDRYLEKNLSDIHILDSSRSASDRLVECLQQFLPTSSMKESSSLPWPRTDGTTAPDADPELTNQILGMATDHTHRRIAHWLSILKKEAALAPDQPTTPTVGLLCALVNGLSIDLNSQFPSISHTEAVEIIRNVVDKLVLI
>NZ_CP042325.1|WP_146338226.1|225464_226274_-|IS1595-family-transposase
MTTTDIINQVKEIISTVTPEERQHLIEQLEQLFHEPEYGEILSQCPRCECDSVVRKGTSKGGQRYLCKGCQRTFGHSTNKVLKTSKLSLETWRKFAECFIDGVSVRRSAERCGVAVATAFFMRHRVLELVEKNAKKVTVNRGNLAYIDETFFPINYKGAAVPDGVKAKKRGGLRKGKSQSRLLVCVVMGVTSTGSIFHQIAGYSSISKNTARLALGDIVTSGCTVITDKGSGYVSALKKLGATTGLIILKMTAANLRQSTHCTLKPNGL
>NZ_CP042325.1|WP_146338224.1|225267_225468_-|hypothetical-protein
MRRFSSVASKNLHRYLSWMEWIDNNTERETLDILRQSTYTVHRCSMNSEHIPPMDDLTRRTITGMM
>NZ_CP042325.1|WP_146340322.1|234381_234687_-|CRISPR-associated-endonuclease-Cas2
MWCLVMFDLPVKTAVERREATRFRNSLLDDGFSMVQYSVYVQYLPLGVNLSKIARNLKSRLPVHGEVRIVPLTDKQWSEAFRFSNGTVEKSEETPEQLQIF
>NZ_CP042325.1|WP_146338240.1|234706_235609_-|type-II-CRISPR-associated-endonuclease-Cas1
MSWRVIDASQLKGKLSYRRGQLMVCPDEREPTAIPLAEIQMVLGGIHCSVSGGLMLKLGELGIPLMFLDWRHIPQSGAFGWSSHTRVGARQIAQAGLSLPKKKSAWSALIRAKVQNQALALRATGSIKEADFLDVLAKKVRSGDPDNIEGQAARFYWRHLELSAGFIREQLSSDPYNSALNYGYTILRGVGIRAVYSAGLWPALGVFHHGRSNAFNLVDDLIEPFRPVVDLVVKNLDLGEDFSGSDIKRTVAHSIKQQFSDDGSAVDTCLNDLSRNFGLYVEGDVSSLSVPKWIGRVTHG
>NZ_CP042325.1|WP_146338242.1|235633_238969_-|CRISPR-associated-protein
MLSTLPSPSHKRYRVGIDVGLHSIGFAAIEIDEHDMPISILNAMSLIHDAGLDPDSQKTAQTRRMVSGVARRTRRLYRQRKRRLKELDEFLLQNGYPVPDLDSSPEKIGWKARAALAEAKITDTDELKLALSHAARHIARHRGWRNPYTSVKSMMSETSSHSDGYAAIEKKFREIVGLKENQETPETLALMVMGLPQGTIKLRGEDGLFSERLQQKDFVQELLLIGRTQELEKTFLNDLIEKVFYAKSPKGSAEGRVGKDELDPSQYKAWRATRAFQEYRIISLLANIRIQERNGTSLGEKRPLSVAERQKAFHFLNTWTKQNFPTWADVSELLGIDRGDLRGTASSNDDGERVTSAPPINNVEQTMSNTSIKEFKTFWKSANNASKDALIRELSNVEAPSEDSPEAIAASSLIRSMPPESLEKLESLHLPDGRSAYSEKTLQRLSTYMLNNVADLHAARRAEFGVDDDWAPAAAPIGQPTGNPAVDRVLKATNRWLMMAEHRWGTPVSINVESMRDGFKSEKSAREISRGQENRAKRNKDVIQSMMTTLNIEGRPDRHTVMKYQAIQRQNGQCAYCGSTITMQNAELDHIVPRAGVGSTNSRINLLAACANCNRSKGKLPFAVWAKKTDKTGVSVESAIDRVKQWPTDAGLNTREMNDFKQQVIFRLKRVSEDEEIDARSKESVSWMANELRHRVSHHFGSEVTVRVFRGSVTAAARRASGVEDKIRLIGGRSGKNRLDRRHHAIDAAVIALMQATVAQILTERDSLRSEQKLTKRPDTTYGDWREYTGKTIADKTVFKTWLKRMNVLVPQLQIALDEDRIPVSENLRLRLGNGQAHKETIQPLNTVTLGSAISMDQIDRAFSPALWTALTRCPDFDWKEGLPENLERQIQVNGTHYSAQDEIKLFSKKAGALALNGGFVELGSSFHHARLYRITGGKKDVYAMLRVYTVDLARYKNQDLFQVELPPQTISVRQAEPKLRKALREGKAEYLTWFVVDDELMLDTAKIATEKVITLLDKFGDIRRWRIRGFESATQLCLRPAQLSAEGLSKDALPDLKEIIGSPDGGKTHGWRSAINKIFGEADPVIIRRDVHGRVRVSSSRGLPVTYRMK
>NZ_CP042325.1|WP_146338244.1|241134_242688_-|amino-acid-carrier-protein
MAELLTTINDTIWSTPLVMLFLAAGIFFTLRTGLIQVLGLPDFFRQIRREKASQDGLSPFQTLMVSMAARVGIGNIAGVATAIAFGGPGAVFWMWVMGFLGAATSFIECTLAQIYKERDPETGQYRGGPAFYIEKAYAHTKAAPILKILALVVAAIHAIATIFFLPSMQANGIANAVTTVWHLDARLIGLILALLLAVIVVGGIQRIAQFASFIVPFMASTYIIIALIIMLSHATRIPEVCELIFKSAFGKEEIFAGITGSAFAWGIRRGVYSNEAGQGNGAMFAGSAEVSHPVKQGFVQAVSVYVDTLLVCSATAFIIISTDMFNVYSSTDASGNTPLLYHGALGDNTPAGPNYVQAGLDTFIAGTGPAFVAIAICFFGFTSAVACYYLAETNLSFLLRSGVKRRGYGTQLPRVAAPFSQRISFSRRIAQGTIIAAMFIGATSTPGAAWLLGDIGMGSLAWFNLIIIVALHRVVITALKDYRLQRAQGLDPQFHPKKLGIKNAEFWVGWRGYKRRF
>NZ_CP042325.1|WP_146338246.1|242860_243559_+|C26-family-cysteine-hydrolase-domain-containing-family
MITVMQPDPKVTLDRFQTWLQEAGQEIQLIALYEQPVPQLGECGEALLILGGTMDALDAQQSPWLPDLHRLLRQALAQNVPVMGICLGHQIIADCFGGEVVVNSRTHAEEGVREIVLTSAGQADPILGALDAKAHLPLSHHDAVTVLPAGATLLASSAACPLQSFRLGSITAVQFHPEASPRTAGYWASLSGGDETWYREEQEKYDADIQRNGKALAAAFAASVTVADNKNS
>NZ_CP042325.1|WP_146338248.1|243555_244767_+|MFS-transporter
MIARNVKISGKAMVLAVALLLSSLVDEIFATAVLLKISAIDARMSVTLFLVVTIGALMAGPLSSRLLVRIAHRRAIIFAVFLCEGSVMALSATLFDAPHMLIFSSGLMGLLGALLWAVIMVIIADSFEGKRFDQVNSVITTMRNLGFVTGPACTGFLFHVGFSAVVALVAAIAFLSAALCAIRWSDIFPGVTANKTETQQQKKHNFLSGLVELLGDTRLRNRLITPLCTVFFGSVVNVGVVLYVLNMRDMGTMVFGAIGTAISTGLVLGPLALELCSIRLRTQSGLALGALLTALGIGGIFLPWSWLGLCLGGLLLGIGNGVQNVYFNRFMKITTTEDNREIRIPAYIFLIYCFSLASYFFGYVFDAENVVFIMHTGSIVTAVLAVFAFLLKDIQPAPKPTVA
>NZ_CP042325.1|WP_144273751.1|244782_245637_-|phosphodiesterase
MSFTSAEHPAPEHFLVHFSDTHFLAPHTTTLHGVARYYDHLAQLLESVAEYAIAPEALIFSGDLTDHGEEHAYASLRALVEPVAQRMGARVIWIMGNHDDRTNFRHMLLDEQPSNPLAPCDSVHWLGGLRIIALDTSVPGQHYGELSDAQLEWLATELRSTAPEGTILAMHHPPIPCIQAQARSVELRGQHRLKEVIYGSDIRSILAGHVHYSTFATFADIPVSVSMGTCYTQDLLTPKRGTRGRDAGQGMHFVHVYPDTIMHSVVQQPGGETVGRFVPGDATQ
>NZ_CP042325.1|WP_146338250.1|245645_246686_-|substrate-binding-domain-containing-protein
MIPPHNRITMADVAREAGVSRSSVSRVFLGQKKVSAENRRKVLEVAERLGYVPNVIASELASHQSRTVGLLLRDAANPAYGLLFTELQRQAQAAGINVVSMTISIDRHEQQHIASLNHLLGMQVAGLIVATGSVPSEKLVPFHNRLPIIRAGRPEPTGKIHAVSYDEVDAGTRLAHHVAHHGHRHVAVICTAPTASYPEWVRASSMITALAEHNVQVTQIHADHDDNGHNHLAQCLDTPRNDTPITAIMCPSDVRQLEVIRWAKARGFAIPDDLSITGCDGIMPGIDLLGISTYRIDVAGVATRVIEHITNLISAQAPPATIINETLPGTLIPGHTVAQPLLTNHA
>NZ_CP042325.1|WP_146338252.1|246682_248374_-|ABC-transporter-permease-subunit
MKKKLSLCLIALVLAWAILTFLIWPQANLLFSIFFPDGHFSFDAVEKLIKSQRATRSLINSVLLALFLSVSNNLVGIFIVLVTRYFRIYGAQLLWLGFATTFIYGGVVLAAGYKFIYGAKGIATQLLSSFIPGLDPHWFQGFWAVAFTMTLATTTNHLLFVSAALRKIDNQTIEAARNMGASHLLILRRIVLPTLAPTLFAVTILTFLTGLGALSAPQILGGREFQTITPLVLAFSMSQSSRQLAALLALSLGLITIGLLVVFNHLEKSGMYFSVSKVSMRLQKQKIDNPIANNLIHLLAYFLWLLYILPIALIVIFSFMSPAAIADGKLNFSALSLENYIRVFTHDNALRPFVVSVGYGVLAALIATVLMLFVAHIVSKYHTALAKILEYALHIPWLLPATMLALGLIMSYDHPTAQLGGMVLTGTPIILLIAYVIVKIPFTLRLLKAAFSSLNSSCEEAATLLGANPLYIFRRITLPAIFPATAAVTALNITSLLDDYDMAVFLAHPRYQPLGLIIQANTTGAVGPEAHANTLVYSVLLMIISTVTMYVVYGRAHSERYTR
>NZ_CP042325.1|WP_144273754.1|248374_249424_-|ATP-binding-cassette-domain-containing-protein
MITYQNIDVAFQDFTAVKDLNLHINEGEFFTFLGPSGCGKSTTLRTLAGFVEPRSGKILVDGTDVTHLAPNKRNIGMVFQNYALFPSMSVRENIAFGLKVASLPRKEIAQRVHEIAEKVKLHSTELDKNLDELSGGQQQRVAIARALVMRPKILLLDEPLSNLDAALRQQLRLELKKLQAEFGITTIYVTHDQEEALSMSDRIAVFNHGKIEQIGTPTEIYERSATEFVCNFVGASSALTEVILTALNNQGAALRPQASSYIRGEKIAFVPFHHALPLRGRVVAQHYQGITSTAIVSMHEDPQCQLSVIYANDQQSYPQVGQECTVFINPADVLQFDSVASAETDTEVA

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Crispr_ID: NZ_CP042325_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042325_2

480647-480733

Orphan

Consensus_repeat	Method
AAAAACTAATAAAACTAAACACTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042325_2

>merge|NZ_CP042325|2|480647-480733|CRISPRCasFinder
AAAAACTAATAAAACTAAACACTATTTTTTATTTTATAAAAAATTTTCCTGCGAAAATAGAGAAAAACTAACAAAACTAAACACTAT

>NZ_CP042325|2|2|480647-480733|CRISPRCasFinder
AAAAACTAATAAAACTAAACACTAT	TTTTTATTTTATAAAAAATTTTCCTGCGAAAATAGAG
AAAAACTAACAAAACTAAACACTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042325.1\|WP_146338519.1\|469959_470595_+\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653
NZ_CP042325.1\|WP_144273938.1\|478122_478995_-\|sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP042325.1\|WP_146338528.1\|474035_475802_-\|phosphodiesterase	unknown	unknown	gnl\|CDD\|226070
NZ_CP042325.1\|WP_146340345.1\|486895_487762_+\|biotin--[acetyl-CoA-carboxylase]-ligase	unknown	unknown	gnl\|CDD\|223417
NZ_CP042325.1\|WP_144273949.1\|483392_485024_-\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|227136
NZ_CP042325.1\|WP_146338538.1\|487784_488252_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225613
NZ_CP042325.1\|WP_144273947.1\|483097_483337_-\|acyl-CoA-carboxylase-subunit-epsilon	unknown	unknown	gnl\|CDD\|379386
NZ_CP042325.1\|WP_144273940.1\|479479_480538_+\|Cj0069-family-protein	unknown	unknown	unknown
NZ_CP042325.1\|WP_146338544.1\|489561_490071_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
NZ_CP042325.1\|WP_144273943.1\|481947_482358_-\|DUF3151-family-protein	unknown	unknown	gnl\|CDD\|378646
NZ_CP042325.1\|WP_144273941.1\|480751_481900_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379062
NZ_CP042325.1\|WP_146338534.1\|482412_483033_-\|septum-formation-inhibitor-Maf	unknown	unknown	gnl\|CDD\|178901
NZ_CP042325.1\|WP_146338516.1\|468619_469525_-\|NlpC/P60-family-protein	unknown	unknown	gnl\|CDD\|366353
NZ_CP042325.1\|WP_146338523.1\|471226_472426_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349936
NZ_CP042325.1\|WP_144273951.1\|485125_486766_-\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|227136
NZ_CP042325.1\|WP_146338541.1\|488259_489525_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_CP042325.1\|WP_144273934.1\|470703_471165_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP042325.1\|WP_146338531.1\|476064_477849_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|227111
NZ_CP042325.1\|WP_144273932.1\|469534_469867_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042325.1\|WP_146338526.1\|472535_473954_+\|NAD(P)H-quinone-dehydrogenase	unknown	unknown	gnl\|CDD\|236112

Protein	Function_ID	Function_description	E-value
NZ_CP042325.1\|WP_146338519.1\|469959_470595_+\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	1.35972e-105
NZ_CP042325.1\|WP_144273943.1\|481947_482358_-\|DUF3151-family-protein	gnl\|CDD\|378646	pfam11349, DUF3151, Protein of unknown function (DUF3151). This family of proteins with unknown function appears to be restricted to Actinobacteria.	7.56776e-57
NZ_CP042325.1\|WP_146338528.1\|474035_475802_-\|phosphodiesterase	gnl\|CDD\|226070	COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism].	2.96816e-120
NZ_CP042325.1\|WP_146340345.1\|486895_487762_+\|biotin--[acetyl-CoA-carboxylase]-ligase	gnl\|CDD\|223417	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism].	2.87001e-71
NZ_CP042325.1\|WP_144273949.1\|483392_485024_-\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NZ_CP042325.1\|WP_146338538.1\|487784_488252_+\|hypothetical-protein	gnl\|CDD\|225613	COG3071, HemY, Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism].	0.00598602
NZ_CP042325.1\|WP_146338534.1\|482412_483033_-\|septum-formation-inhibitor-Maf	gnl\|CDD\|178901	PRK00148, PRK00148, Maf-like protein; Reviewed.	3.97183e-111
NZ_CP042325.1\|WP_146338544.1\|489561_490071_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.52864e-87
NZ_CP042325.1\|WP_144273947.1\|483097_483337_-\|acyl-CoA-carboxylase-subunit-epsilon	gnl\|CDD\|379386	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit. This family includes the epsilon subunits of propionyl-CoA carboxylase, EC:6.4.1.3, and acetyl-CoA carboxylase, EC:6.4.1.2. These enzymes are involved in the biosynthesis of long-chain fatty acids. The epsilon subunit is necessary for an efficient interaction between the alpha and beta subunits of these enzymes.	4.34523e-15
NZ_CP042325.1\|WP_144273941.1\|480751_481900_+\|AAA-family-ATPase	gnl\|CDD\|379062	pfam13191, AAA_16, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	1.79085e-07
NZ_CP042325.1\|WP_144273934.1\|470703_471165_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	8.69629e-15
NZ_CP042325.1\|WP_146338526.1\|472535_473954_+\|NAD(P)H-quinone-dehydrogenase	gnl\|CDD\|236112	PRK07845, PRK07845, flavoprotein disulfide reductase; Reviewed.	0
NZ_CP042325.1\|WP_146338523.1\|471226_472426_+\|amidohydrolase	gnl\|CDD\|349936	cd08014, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of uncharacterized bacterial proteins predicted as putative amidohydrolases. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	3.8116e-175
NZ_CP042325.1\|WP_144273951.1\|485125_486766_-\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NZ_CP042325.1\|WP_144273938.1\|478122_478995_-\|sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	1.92869e-93
NZ_CP042325.1\|WP_146338531.1\|476064_477849_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP042325.1\|WP_146338541.1\|488259_489525_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	3.0893e-166
NZ_CP042325.1\|WP_146338516.1\|468619_469525_-\|NlpC/P60-family-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	6.15326e-29

>NZ_CP042325.1|WP_144273940.1|479479_480538_+|Cj0069-family-protein
MHKRIVVFEVEGGSDKYFDGHRKDTMPIVNAIKAQGWESEVIFYRPEWAEAIFEYVSTNCDAYISRVNPGNIPGGEKGYFDLLSKLSDAGLIGMSTPAEMMAYGAKDALVKLNDTDLVPADTAAYYDVETFHNTFPTSLSYGERVLKQNRGSTGSGIWRVQLEDKELAAQVTPGTALPLDTKLRCTEAVDNHTEIRELGEFMDFCDQYIIGDNGMLVDMRFMPRIVEGEIRILLVGPHPVFVVHKKPAEGGDNFSATLFSGAKYTYDKPESWQELIDMFAQARPVIAEKLGGDNIPLIWTADFMLADAEDGSDTYVLGEINCSCVGFTSELDMGIQELVAKEAIARVEKKFA
>NZ_CP042325.1|WP_144273938.1|478122_478995_-|sulfurtransferase
MAVPFDPHPLLQDYAHPECLVSAAWLSARLGTDGIRVIESDEDSLLYDIGHIPGAIRINWLKDLNDGSIRDFISGEQFAALMEEKGISRDDTVIIYGDKANSWAAFTFWIFKLFGHEDVRLLNGGRDAWMAEERDTSFSIPEYPATHYPVVERVDVPLRAFFTDVLEKNNNTVLLDVREEDEYIGKNSTSYPHKGALRQGHIPSAMNITWDKTILPNTYFRSHENLKEIFQTLDDSMEIITYCQTGERAAHTWFVLKYLVGIKNVRIYDGSWAEWGNMVRNPIIRGSLPA
>NZ_CP042325.1|WP_146338531.1|476064_477849_-|ATP-grasp-domain-containing-protein
MSVENKKITKVLIANRGEIAIRVIRAARDAGIASVAVYAEPDADAPFVSLADEAFALGGQNSAESYLVIEKIIDAAQKSGADAIHPGYGFLSENADFAQAVIDAGLIWIGPSPQSIRELGDKVTARHIALRADAPMAPGTKEPVKDASEVVAFAEEHGLPIAIKAAFGGGGRGMKVAYKMEEVAELYESATREATAAFGRGECFVERYLDKARHVECQVIADQHGNVVVAGTRDCSLQRRFQKLVEEAPAPFLTEQQRTSLHESAKRICREAGYYGAGTVEYLVGSDGLISFLEVNTRLQVEHPVTEVTTGLDLVREQFRIAEGQELRIKEDPTPRGHAFEFRINGEDAGSNFMPAPGKITKYVEPAGSGVRMDSGIVEGSVIGGQFDSMLAKLIVFGETREEALERSRRALSEYVVEGMPTVLPFHRHIVENPAFVGDGEKFDVYTKWIEEEWDNPIPAYVDPADQAEEEAQEPAQKVIVEIDGRRVEVALPANLALGGGNAAGAKKKAKKRRSGGAKAGVSGDTVASPMQGTVIKVNVEEGAEVAEGDVVVVLEAMKMENPVKAHKAGTVSGLAVAAGEGVTKGQALLDIKD
>NZ_CP042325.1|WP_146338528.1|474035_475802_-|phosphodiesterase
MSDTSVKKAHSFSRRTFLSSSALTLGFLSFGATNAQANVSTPDSAAGFLHGVASGDPLPDSVIIWTRLTPDAAAVPGSGLGAPTRVRWEVSAQAQFSTIIAAGEVTTSPDSDHTVKINVTGLAPATTYFYRFSVVDGALSGTSSPVGRTRTAPAAGATPQNVRFGVVSCSNIEAGYFLSYRELAARNDVEFIIHLGDYTYEYESGKYTGLYGTLVRPTQPPHRTTTLQDYRVRLGHYRRDVDLCNLHAAKPMISIWDDHEFADNAYRDGFGGNSATLNDDVPAIKAAATQAYYEWMPVRTSNDGANGTHLYRHLQFGSLVELILPDLRTYRDRQLLMYGKGNFFKSDPDFLRATGDPQRSALGETQFAWLSSVLESSATQWQAIGNSVMISPMTLPTSVDPLINTWLQEQFGLPSDGLALNQDQWDGFMAERQRLVDTLRAQGKNNVVFLTGDIHSSWASAVPANPTRYRAGDRQAAATEFVAPSVTASNGYEAIVSKPGTEALGDVLMNTAYEALRLANPWHQWIDMKYHGFMVVDFNAQRTQCDWFFTNTVLENSAQFYHARSYQTLAGAPGPVAAPAPLPQTAVY
>NZ_CP042325.1|WP_146338526.1|472535_473954_+|NAD(P)H-quinone-dehydrogenase
MPTHKTRIVIIGGGPAGYEAALAGAKYGAEITLIEDHGLGGSAVIDDCVPSKSFIAGANIKTDLRRADDMGLNKGIGETYLEIQALNHRVRGLADEQSHDIYESMQRHGIRVIQGRGSFDDYSHKQTVHYIKVETTQNTEETIECDLVLVATGASPRILPNAQPDGERILTWRQIYDIEELPEHLVVVGSGVTGAEFVSAFAELGVKVTMVASRDRILPHDDADAADVLETVLAERGVALEKHARVDSVTRTEDGGVCVRTADGREIFGSHALMTVGSIPNTKDLGLEKVGIETTDSGHIKVDRVSRTNVAGVYAAGDCTDLFPLASVAAMQGRVAMYHALGEGVSPIRLKTVATAVFTRPEIATVGITQAQIESGEVMARTIMLPLHTNPRAKMRSLRHGFVKLFCRKNSGLIIGGVVVAPTASELILPIAVAVSNGLTVSDLADTFSVYPSLSGSITEAARQLVQHDDLE
>NZ_CP042325.1|WP_146338523.1|471226_472426_+|amidohydrolase
MNNALLQEAQHWITEHHDEIIGWRRHIHKYPELSHKEFATTDFIEEILKHNGLHPVRFTPTGLYVDIGPEDKPRVAFRADIDALPINEQSAEPFSSVKPGVMHACGHDIHTTIALALACFLAQTTQLETGVRIIFQPAEEVMDGGAPEVIAQGALRNVAAIFAVHAEPKIAVGQVGVREGAITSAGDVVEITVKGAGGHSARPHLTTDVVYALAKLVTELPGLLSRRVDPRSATVMVFGTINAGYAPNAIPEHGSVAGTIRTGDIDVWREMEPLLRQLIDQVLAPTGCEYDIVYTKGVPPVVNDDCATSLLRQAARALDPASVITVAQSTGGEDFSWYLEHVPGSMARLGCWDTIGEVGDLHQADMRADEGSLAVGIRLFAAVLDQYQMRGHVHSDDRR
>NZ_CP042325.1|WP_144273934.1|470703_471165_+|helix-turn-helix-domain-containing-protein
MTIVDVHWASYGYALGVRLKAIREMRGLSQTKLADLSGLSRTTISIIERNESNSGTATRPTLQTIYTLARVLHVPPAVLLPGVGKTVADVFTEDTPGDLSIEIHWPTQAIDVVAFSPHYIETAYPGQIPEFDQYELEKVEQQHELEAPITDRD
>NZ_CP042325.1|WP_146338519.1|469959_470595_+|uracil-phosphoribosyltransferase
MEIRVIEHPLVSSRLTIMRDARTDNAGFRVALADLGAMLIYEASRDLAVEKFKLQTPVAMTEGIRLEEPPIIVPVIRAGLGMIDPALSMIPDAQVGFIGLARDEKTHQPVPYLEALPEDLSGRSVFIVDPMLATGGSLLHALELLVARGASDITAVCMVSAQPGVQALADSGYPVRLVTATIDPELNDDAYIVPGLGDAGDRLYGPRNIDL
>NZ_CP042325.1|WP_144273932.1|469534_469867_-|hypothetical-protein
MTIELSTTNEPNLAICPHAIRALVQQLFEQTEIISHPLARFTSPNPSINNALIAFNAAVDNLVQRSEKQKQHAHCLMEKAHALLSDIEHLDSSLAFSLENSLVSSLAQYL
>NZ_CP042325.1|WP_146338516.1|468619_469525_-|NlpC/P60-family-protein
MNVFTHVLPTLNSISTLTPTLQQLTVPTFPDFSLAHNLAQQFGAPKALLASQSETLHNDRYQVISLGTRIDQETKNLAHSLYALGQQFLIDVCQKFTSQLTTLGPNPSSVLALRAQLGALNKEYEYKISQLLDDTQLRLQPIISELGTIATKTDAEHESPLSQPAHTKNDEPYFPQEHTSEGHASAYQRERGQRAVAAAKSALGTPYVWGGTSPAGFDCSGFTQWSWRQAGVELPRLAEQQSVGTPVAQSDLIPGDLLVWDGHVAMYAGNGEIIEAGDPVQISPLRTTNMGMNFKGYFRPS
>NZ_CP042325.1|WP_144273941.1|480751_481900_+|AAA-family-ATPase
MNIANPFTPTFGITPQYFVGRDKILSTFMDGLKVKTADARRMLLLSGARGVGKTVALNALENTAIDNGWLVISETAIPGLKNRLVMEHLPTLLSELDPKAQIKRITGVQIPAGLGGVNFHTEQKYVASPSLRSQLTTLCDFLGKHSTGLVLSIDELHTGALADLQEIAATIQHLFREGRPIALIMAGLPENIDKLLDAPGITFLRRAQHEVLGALDYESARLALELPIQSEGLMWHHDALQNTLEISRGYPYLIQALGSCIFDAAMTLQQRELTLELVKTAAESALTLVGMNVHRPILRSLSDREQAFLYAMAQDEGFSRVSDIAQRLDVSSNYISQYRIRLMNKHVVYSPVHGKISFAMPGMREFLRRNKVQVLPMWEEKS
>NZ_CP042325.1|WP_144273943.1|481947_482358_-|DUF3151-family-protein
MTKFNDMLAPPPVTLPAEHISSSVSYSTVLEHPDSPLMWATLAEEAIAHAATDQEKATAYAFARTGYHRSLDRLRAHGWKGWGPVPFTHEPNQGVLRAIAALGKASLMINDQNEYDRIRQMLSDADPSCVATLLDA
>NZ_CP042325.1|WP_146338534.1|482412_483033_-|septum-formation-inhibitor-Maf
MRIVLASASPSRKAILLSAGVEPHIHPAHVDEEKLIAQLHKHNATPEHIVTELATAKAQSIAPQYPHDVIIGGDSMLLIDGALQGKPHTIDNTIARWKAQRSKTAQLITGHHIITPQGTHSEASCTTVHFANPNDEDIEAYARSGEPLKCAGAFTLEALGGWFIDKIEGDPSSVIGLSLPVVRRALYHCGYNVSDFWSAAPPGSNL
>NZ_CP042325.1|WP_144273947.1|483097_483337_-|acyl-CoA-carboxylase-subunit-epsilon
MSEKENTEAQQPEKQPFLRVLKGNPSASEVAALTVLFAGLAQSSSQELERERNLWGNIEERLRKPATYNPTAFRNVSFF
>NZ_CP042325.1|WP_144273949.1|483392_485024_-|acyl-CoA-carboxylase-subunit-beta
MTATLNNNADNQAPDLSTTAGKLADLRARLAEAQAPMGQAAVEKTHEAGKKTARERIEYLLDEGSFVEVDALARHRSKNFGLDAKRPVTDGVVTGYGTIDGRKVCVFSQDGAIFGGALGEVYGEKIVKIMDLAIKTGVPLIGINEGAGARIQEGVVSLGLYSQIFYRNTLASGVIPQISLIMGACAGGHVYSPALTDFIIMVDKTSKMFITGPDVIKTVTGEEVTQEELGGAHTHMATSGTSHYTAADDADALDWVRDLVGFLPSNNRAEAPREQAEIMVGSIQDNITDSDLELDTLIPDSPNQPYDMKDVITRVLDDEDFFEIQEGYAGNIITGFGRVEGRSVGIVANQPTEFAGCLDIKASEKAARFIRTCDAFNIPIIEFVDVPGFLPGTNQEYDGIIRRGAKLLYAYSEATVGKITVITRKSYGGAYCVMGSKDMGADLVFAWPTAQIAVMGAAGAVGFIYRKELKAAAAEGKDVTAVAKEYEREYEETLVNPYMAAERGFVDAVIPPSETRGQIIEGLRLLDRKVVNVPAKKHGNIPL
>NZ_CP042325.1|WP_144273951.1|485125_486766_-|acyl-CoA-carboxylase-subunit-beta
MTISSYSVDTSSLPGKMTTAEKISDLITRRRKALLPLGKAALAKVRSQGRLSARDRLEYLLDEGSFIETDQLAKHRTFSFSMQEKRPETDGIITGWGTIDGREVCIFSQDGTVFGGALGEVYGEKMCKIMRLAVDTGRPLIGLYEGAGARIQDGAVSLDLIAQTFYHNINASGVVPQISVIMGSSAGGNAYSPALTDFVIMVENSAKMFVTGPDVIKTVTGEEVSQEQLGGAAIHMTTAGNSHYTAESDKDALDFVADLISFLPDNNRCVAPITDHHVDEGTIDSCLTPDDMRLDTIIPDSPSIPYDVHEVISALTDDGDYLEIQAQRAENVVIAFGRIEGQSVGFVANQPTQLAGCLDIDSAEKAARFIRTCDAFNIPIIMLVDVPGFLPGTNQEHGGILRRGAKLLYAYGEATVPKITVTMRKAYGGAYCVMGSKGLGADVNFAWPTAQIAVMGAAGAVGFLHRKEITAATKNGMSAENIAELIHSFEREYEDQMLTPYLAAERGLIDAVILPRETRSQLARNLRLLRTKHVQRPARKHGNIPL
>NZ_CP042325.1|WP_146340345.1|486895_487762_+|biotin--[acetyl-CoA-carboxylase]-ligase
MTTSQTRNRIPLDHAFLEKQLTAHGGLGPFSTIYHSDSTGSTNTDLVAAARAGAPAWSVHITEHQQAGRGRMGRKFQAPPSALLAFSVLIRPPQSALNRLGTLSLAAGLALVDVLESHEGIGLKWPNDLVCNTKKLSGILAEAVDLGDNPAIVIGVGLNVDLREDELPVAHASSLYLEGIQCDRTELAVHVLRSFYRRIRQWEDNAPELIDDYRKVCVTLGQEVRAILPGEKELLGRAVAVTDQGHLLIEDQAGMTHEMSVGDIIHLRQKDQWHYCSDPADSSETSRS
>NZ_CP042325.1|WP_146338538.1|487784_488252_+|hypothetical-protein
MALVVAADEDIIVDVTAPLSRLAYPVIRLTLLTALCWMGIGYIDQPQPYVIIETGMRNIFVGIWFFLAFLSLGVPIIKNRRNRLVLTDSRIIIRHFGIGSHTESIPLYAITGVRGKGKKLLIAIEGYAKPIMLDDVPRAGKIARLIEEECSFYHV
>NZ_CP042325.1|WP_146338541.1|488259_489525_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MTSLSQQQQYEQQRSVAAHAPGMPIVSVIGDGQLARMLHTEAIELGLSIRVLAGGLSSSAAQVCSDIVIGDYTDVDTLRHVAKDSAVITFDHEHVPSEHLRILADEGANVQPGYQALLNAQDKLVMRKKLRELGAPVPVFAAIESVADAQAFWEAVSGAVCLKARRGGYDGHGVWFPQTCSELEALVAQLLEKGTPLMAEKKIALTRELSAMVARTPSGEKKTWDVVESVQEDGICTQAIAPAPQLSESLQQQARDLAGRIAEELGVTGVLAVELFETTDQWGQPEIFVNELAMRPHNTGHWSQDGCVTSQFEQHLRAVMDYPLGSTDLRAPVTVMANILGGATEPELSIPERMQAVWRRYPQAKIHLYGKTHRPGRKIGHVNICGTDVEQTRQQALAAAYFMVHGVWNEPENNEPENDQA
>NZ_CP042325.1|WP_146338544.1|489561_490071_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSEKTPLVGLIMGSDSDWPTVEPAAHILAQFGVVFEVGVVSAHRTPEKMLAYAKQAHTRGLKVIIACAGGAAHLPGMVAAATPLPVIGIPRALKELDGMDSLLSIVQMPGGVPVATVSIGGAKNAGLLAVRILGAHQPELIEKMVDYQENMRTEVEEKDEKLRQRLLGQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP042325_1	1.6\|233563\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233563-233590	28	NZ_CP042325.1	438969-438996	0	1.0

1. spacer 1.6|233563|28|NZ_CP042325|CRISPRCasFinder,CRT matches to position: 438969-438996, mismatch: 0, identity: 1.0

cgaggcgggaaatgccgtcgggatgctt	CRISPR spacer
cgaggcgggaaatgccgtcgggatgctt	Protospacer
****************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042325_1	1.14\|234076\|28\|NZ_CP042325\|CRISPRCasFinder,CRT,PILER-CR	234076-234103	28	AP013397	Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-U-MedDCM-OCT-S25-C46	29458-29485	4	0.857
NZ_CP042325_1	1.9\|233755\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233755-233782	28	MT986025	Gordonia phage GrootJr, complete genome	31204-31231	5	0.821
NZ_CP042325_1	1.9\|233755\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233755-233782	28	MH779501	Gordonia phage Emianna, complete genome	31822-31849	5	0.821
NZ_CP042325_1	1.9\|233755\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233755-233782	28	MH727547	Gordonia phage Foxboro, complete genome	32328-32355	5	0.821
NZ_CP042325_1	1.9\|233755\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233755-233782	28	MH779510	Gordonia phage Kurt, complete genome	31837-31864	5	0.821
NZ_CP042325_1	1.9\|233755\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233755-233782	28	MH727552	Gordonia phage KidneyBean, complete genome	31600-31627	5	0.821
NZ_CP042325_1	1.9\|233755\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233755-233782	28	MT889393	Gordonia phage NovumRegina, complete genome	31203-31230	5	0.821
NZ_CP042325_1	1.9\|233755\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233755-233782	28	MH536824	Gordonia phage NatB6, complete genome	30873-30900	5	0.821
NZ_CP042325_1	1.9\|233755\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233755-233782	28	MH779508	Gordonia phage Jifall16, complete genome	31476-31503	5	0.821
NZ_CP042325_1	1.9\|233755\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233755-233782	28	NZ_CP039924	Agrobacterium tumefaciens strain CFBP7129 plasmid pAtCFBP7129a, complete sequence	55942-55969	5	0.821
NZ_CP042325_1	1.10\|233819\|28\|NZ_CP042325\|CRISPRCasFinder,CRT,PILER-CR	233819-233846	28	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	519987-520014	5	0.821
NZ_CP042325_1	1.4\|233435\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233435-233462	28	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	344129-344156	6	0.786
NZ_CP042325_1	1.6\|233563\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233563-233590	28	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	497183-497210	6	0.786
NZ_CP042325_1	1.8\|233691\|28\|NZ_CP042325\|CRISPRCasFinder,CRT	233691-233718	28	MH791397	UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome	74655-74682	7	0.75
NZ_CP042325_1	1.13\|234011\|29\|NZ_CP042325\|CRISPRCasFinder,CRT,PILER-CR	234011-234039	29	MN855865	Myoviridae sp. isolate 346, complete genome	7003-7031	7	0.759
NZ_CP042325_2	2.1\|480672\|37\|NZ_CP042325\|CRISPRCasFinder	480672-480708	37	NZ_CP012032	Leptospira borgpetersenii serovar Ballum strain 56604 plasmid lbp2, complete sequence	36057-36093	12	0.676

1. spacer 1.14|234076|28|NZ_CP042325|CRISPRCasFinder,CRT,PILER-CR matches to AP013397 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-U-MedDCM-OCT-S25-C46) position: , mismatch: 4, identity: 0.857

tcttggagctcaggtatttcatcttccc	CRISPR spacer
tcttgtagctcaggtaattcatctttac	Protospacer
***** ********** ********. *

2. spacer 1.9|233755|28|NZ_CP042325|CRISPRCasFinder,CRT matches to MT986025 (Gordonia phage GrootJr, complete genome) position: , mismatch: 5, identity: 0.821

acgacgatgacaacgaagagttcgatga	CRISPR spacer
tcgacgatgacatcgaagagtccgaggt	Protospacer
 *********** ********.*** *

3. spacer 1.9|233755|28|NZ_CP042325|CRISPRCasFinder,CRT matches to MH779501 (Gordonia phage Emianna, complete genome) position: , mismatch: 5, identity: 0.821

acgacgatgacaacgaagagttcgatga	CRISPR spacer
tcgacgatgacatcgaagagtccgaggt	Protospacer
 *********** ********.*** *

4. spacer 1.9|233755|28|NZ_CP042325|CRISPRCasFinder,CRT matches to MH727547 (Gordonia phage Foxboro, complete genome) position: , mismatch: 5, identity: 0.821

acgacgatgacaacgaagagttcgatga	CRISPR spacer
tcgacgatgacatcgaagagtccgaggt	Protospacer
 *********** ********.*** *

5. spacer 1.9|233755|28|NZ_CP042325|CRISPRCasFinder,CRT matches to MH779510 (Gordonia phage Kurt, complete genome) position: , mismatch: 5, identity: 0.821

acgacgatgacaacgaagagttcgatga	CRISPR spacer
tcgacgatgacatcgaagagtccgaggt	Protospacer
 *********** ********.*** *

6. spacer 1.9|233755|28|NZ_CP042325|CRISPRCasFinder,CRT matches to MH727552 (Gordonia phage KidneyBean, complete genome) position: , mismatch: 5, identity: 0.821

acgacgatgacaacgaagagttcgatga	CRISPR spacer
tcgacgatgacatcgaagagtccgaggt	Protospacer
 *********** ********.*** *

7. spacer 1.9|233755|28|NZ_CP042325|CRISPRCasFinder,CRT matches to MT889393 (Gordonia phage NovumRegina, complete genome) position: , mismatch: 5, identity: 0.821

acgacgatgacaacgaagagttcgatga	CRISPR spacer
tcgacgatgacatcgaagagtccgaggt	Protospacer
 *********** ********.*** *

8. spacer 1.9|233755|28|NZ_CP042325|CRISPRCasFinder,CRT matches to MH536824 (Gordonia phage NatB6, complete genome) position: , mismatch: 5, identity: 0.821

acgacgatgacaacgaagagttcgatga	CRISPR spacer
tcgacgatgacatcgaagagtccgaggt	Protospacer
 *********** ********.*** *

9. spacer 1.9|233755|28|NZ_CP042325|CRISPRCasFinder,CRT matches to MH779508 (Gordonia phage Jifall16, complete genome) position: , mismatch: 5, identity: 0.821

acgacgatgacaacgaagagttcgatga	CRISPR spacer
tcgacgatgacatcgaagagtccgaggt	Protospacer
 *********** ********.*** *

10. spacer 1.9|233755|28|NZ_CP042325|CRISPRCasFinder,CRT matches to NZ_CP039924 (Agrobacterium tumefaciens strain CFBP7129 plasmid pAtCFBP7129a, complete sequence) position: , mismatch: 5, identity: 0.821

acgacgatgacaacgaagagttcgatga	CRISPR spacer
tcaacgatgacatcgaagagatcgatca	Protospacer
 *.********* ******* ***** *

11. spacer 1.10|233819|28|NZ_CP042325|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 5, identity: 0.821

gcaagattgattttgcaacctttgagcg---	CRISPR spacer
tcaagattgattttgcaacct---agtgcaa	Protospacer
 ********************   **.*

12. spacer 1.4|233435|28|NZ_CP042325|CRISPRCasFinder,CRT matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 6, identity: 0.786

tttgttcaatgtgctagacaacaccata	CRISPR spacer
tcaaatcaatgtgctttacaacaccata	Protospacer
*. . **********  ***********

13. spacer 1.6|233563|28|NZ_CP042325|CRISPRCasFinder,CRT matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 6, identity: 0.786

cgaggcgggaaatgccgtcgggatgctt	CRISPR spacer
cgaggcgcgaaacgccgtcgggaagacg	Protospacer
******* ****.********** * .

14. spacer 1.8|233691|28|NZ_CP042325|CRISPRCasFinder,CRT matches to MH791397 (UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome) position: , mismatch: 7, identity: 0.75

ccttcttctgcaccgttttcagcatcca	CRISPR spacer
gcttcttctgcattgttttcagcacgtg	Protospacer
 ***********..**********. ..

15. spacer 1.13|234011|29|NZ_CP042325|CRISPRCasFinder,CRT,PILER-CR matches to MN855865 (Myoviridae sp. isolate 346, complete genome) position: , mismatch: 7, identity: 0.759

tcaaacgcgcgattattgattctgccagc	CRISPR spacer
acgaacgcgcgtttattgattatgccgaa	Protospacer
 *.******** ********* ****..

16. spacer 2.1|480672|37|NZ_CP042325|CRISPRCasFinder matches to NZ_CP012032 (Leptospira borgpetersenii serovar Ballum strain 56604 plasmid lbp2, complete sequence) position: , mismatch: 12, identity: 0.676

----tttttattttataaaaaattttcctgcgaaaatagag	CRISPR spacer
agaacccgca----atataaaattttccttcgaaaatagat	Protospacer
    ... .*    *** *********** **********

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP042325

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection