CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP042431	Pseudobacter ginsenosidimutans strain Gsoil 221 chromosome, complete genome	3 crisprs	cas1,cas4,cas3,cas7,cas6,csa3,WYL,DEDDh,PD-DExK	0	5	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042431_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042431_1

777383-777472

Unclear

Consensus_repeat	Method
ATTTCAATTCAACCTTTGTACGATTAACAG	CRISPRCasFinder

1 spacers

cas2,cas1,cas4,cas3,cas7,cas6

The CRISPR arrays of NZ_CP042431_1

>merge|NZ_CP042431|1|777383-777472|CRISPRCasFinder
GTTTCAATTCAACCCTTGTACGATTAACAGTTCAATAATTGTTTATGAACAGCAAATATATTTAAATTCAACCTTTGTGCGATTAACAGA

>NZ_CP042431|1|1|777383-777472|CRISPRCasFinder
GTTTCAATTCAACCCTTGTACGATTAACAG	TTCAATAATTGTTTATGAACAGCAAATAT
ATTTAAATTCAACCTTTGTGCGATTAACAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042431.1\|WP_147122039.1\|770757_771378_-\|DUF4974-domain-containing-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP042431.1\|WP_130542962.1\|791471_792302_-\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555
NZ_CP042431.1\|WP_130542971.1\|776440_776803_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379639
NZ_CP042431.1\|WP_130542969.1\|781099_782104_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
NZ_CP042431.1\|WP_130542966.1\|784945_785623_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273860
NZ_CP042431.1\|WP_147122037.1\|766832_767132_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042431.1\|WP_158643762.1\|771489_771732_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042431.1\|WP_130542967.1\|782648_784949_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP042431.1\|WP_130542970.1\|780834_781098_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP042431.1\|WP_130542968.1\|782141_782645_-\|Dna2/Cas4-domain-containing-protein	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP042431.1\|WP_130542976.1\|767142_770496_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP042431.1\|WP_130542963.1\|789974_791360_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl\|CDD\|235392
NZ_CP042431.1\|WP_130542973.1\|772731_773928_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP042431.1\|WP_130542964.1\|786661_788659_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042431.1\|WP_130542965.1\|785615_786644_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP042431.1\|WP_130543239.1\|788697_789480_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|187889
NZ_CP042431.1\|WP_130542978.1\|764856_765660_-\|DUF4843-domain-containing-protein	unknown	unknown	gnl\|CDD\|374383
NZ_CP042431.1\|WP_130542974.1\|772035_772632_-\|RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|274376
NZ_CP042431.1\|WP_130542972.1\|774044_776435_+\|immunoglobulin-domain-containing-protein	unknown	unknown	gnl\|CDD\|376100
NZ_CP042431.1\|WP_147122035.1\|765672_766743_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|185760

Protein	Function_ID	Function_description	E-value
NZ_CP042431.1\|WP_147122039.1\|770757_771378_-\|DUF4974-domain-containing-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	4.90539e-22
NZ_CP042431.1\|WP_130542971.1\|776440_776803_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379639	pfam14534, DUF4440, Domain of unknown function (DUF4440).	1.8112e-10
NZ_CP042431.1\|WP_130542969.1\|781099_782104_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.23221e-162
NZ_CP042431.1\|WP_130542965.1\|785615_786644_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	7.62984e-35
NZ_CP042431.1\|WP_130542966.1\|784945_785623_-\|hypothetical-protein	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	4.38673e-17
NZ_CP042431.1\|WP_130542967.1\|782648_784949_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	1.38141e-52
NZ_CP042431.1\|WP_130542970.1\|780834_781098_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.93896e-30
NZ_CP042431.1\|WP_130542968.1\|782141_782645_-\|Dna2/Cas4-domain-containing-protein	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	2.95656e-56
NZ_CP042431.1\|WP_130542976.1\|767142_770496_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	3.2289e-175
NZ_CP042431.1\|WP_130542963.1\|789974_791360_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl\|CDD\|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0
NZ_CP042431.1\|WP_130542973.1\|772731_773928_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	2.52736e-29
NZ_CP042431.1\|WP_130543239.1\|788697_789480_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187889	cd09759, Cas6_I-A, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	3.78079e-21
NZ_CP042431.1\|WP_130542962.1\|791471_792302_-\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	8.21948e-15
NZ_CP042431.1\|WP_130542978.1\|764856_765660_-\|DUF4843-domain-containing-protein	gnl\|CDD\|374383	pfam16132, DUF4843, Domain of unknown function (DUF4843). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various Bacteroides species. Distant homology analysis suggest distant relation between this family and other families of proteins with immunoglobulin-like folds, which are often involved in substrate binding. However, specific function of this family is unknown. There is distant homology to the Calx-beta family pfam03160.	1.25844e-56
NZ_CP042431.1\|WP_130542974.1\|772035_772632_-\|RNA-polymerase-sigma-70-factor	gnl\|CDD\|274376	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found primarily in the genus Bacteroides. This family appears to have resulted from a lineage-specific expansion as B. thetaiotaomicron VPI-5482, Bacteroides forsythus ATCC 43037, Bacteroides fragilis YCH46 and Bacteroides fragilis NCTC 9343 contain 25, 12, 24 and 23 members, respectively. There are currentlyonly two known members of this family outside of the Bacteroides, in Rhodopseudomonas and Bradyrhizobium.	8.80121e-43
NZ_CP042431.1\|WP_130542972.1\|774044_776435_+\|immunoglobulin-domain-containing-protein	gnl\|CDD\|376100	pfam18676, MBG_2, MBG domain (YGX type). This domain is found in a variety of bacterial extracellular proteins. This domain is related to the MBG domain (pfam17883). But it replaces the characteristic YDG motif close the N-terminus with a YGX motif.	3.06323e-17
NZ_CP042431.1\|WP_147122035.1\|765672_766743_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|185760	cd08977, SusD, starch binding outer membrane protein SusD. SusD-like proteins from Bacteroidetes, members of the human distal gut microbiota, are part of the starch utilization system (Sus). Sus is one of the large clusters of glycosyl hydrolases, called polysaccharide utilization loci (PULs), which play an important role in polysaccharide recognition and uptake, and it is needed for growth on amylose, amylopectin, pullulan, and maltooligosaccharides. SusD, together with SusC, a predicted beta-barrel porin, forms the minimum outer-membrane starch-binding complex. The adult human distal gut microbiota is essential for digestion of a large variety of dietary polysaccharides, for which humans lack the necessary glycosyl hydrolases.	9.24505e-18

>NZ_CP042431.1|WP_130542971.1|776440_776803_-|nuclear-transport-factor-2-family-protein
MQNIATTIDQFRAAVLDSNTTTLHQLLSDTLSYGHSDGHVEGKNDFIQKISDGTYKFLTMDLTAQTITETESFAIVRHELDAQTFDEQKAGEAHLYVLLVWTKYEDGWKLIARQAVKKLR
>NZ_CP042431.1|WP_130542972.1|774044_776435_+|immunoglobulin-domain-containing-protein
MRIFYLTTILVMFAHTWLNFENRNTNSSAIYNSTNETTVARTGGEWDDFTSCGFANAQSNSTTAVCVLCSIQDAANTTDSDTLNYSVLSIPLAAGSGSVQQQMIFPSVYAPGTNVKIMLEFPAQVVDATLLSALEISSFNGATSNNDAYLGNSSQLQITPVAGSTRLSVLFTAGAAFDRVQVKLRAGIVSALVKLNLYYARIYHEPPVISNTALEVCALTPVTLSATDAPGHFIEWTQEQAGGGSTIIGTGASINATGFTGSRTYYAQYVRSYDNCHTSPKTPVTITTIAAPQISLGPQSIQRQVNAAASFTIDVFNDDQLTYRWQSDAGSGFTDLTEGGSYENTATATLNIPAVAFSMNGYEYRCIISRCGQSDTSQAATLTITKLSQTISFVDQTNGSTVNVVYGDAAISGVANTTSSLAVAYQSSNTNVLSVNTTGSVSIKGAGTAVITASQAGDASYAPAQDISFTVQVGRKLLGITANTASKVYGTNDPPLTYSVSGLVNGDLESIITGGLKRDVGEDVSTYAIVQNTINAGNNYTIDYTGANFTITKASQVITWVQELEAGCNGINQITLTANSSSNLSVSYSVADNSIATVTGSTLTAAGPGSTSVTAGQAGDNNYLPATPVSIVFNNLRSSMIRQHWNDVLLFDNSGGEFVSWKWFKNNTEVSGQTQPYYSEKQSLHGTYYAIATDRAGNTLRTCPITISAGTAPVRNMRVYPNPAKAGNPVTVEINYPAGELQGARLVISHTNGTVVQEYNNVQPVMTIALPSSGQLFIVSIVLANGQRATVNVLAK
>NZ_CP042431.1|WP_130542973.1|772731_773928_+|TlpA-family-protein-disulfide-reductase
MKRIIFLICCFVPVCSLVAQSHKYALQFELKDFSLSTLPSLIVVVGGKDKSILKEVSGKKMELWIDSIVDYPMNVRVLYYPDCTSEMRKDIEADRIPRPSASANLFITDAVNPVIVKRDTIFLLQQNILQKKYQQLQDDIMVRVNQFNERTGNQLHQAYMATESQQEKDSIERLHDNMFKINAGRPNLDSVIMPCIQNNLNNVISLHAMSSYITQCRFFKFDIPGQTFQSFLHSMPAQLRQLRFWKELDEITKVIKSGRSLIGQKAPAFINLKDSSGKVVQLEQLKGKIVFVDFWASWCAPCMAQVPQLKAAYQKVKNNTVEFVGISLDESVNSWKQAIRNSQLNWINLTDLKGTNGLTAIQYKALLIPYNLLIDKNGVVVKENIPIEALEKTIEELL
>NZ_CP042431.1|WP_130542974.1|772035_772632_-|RNA-polymerase-sigma-70-factor
MRTSLYSSYSDEHLVVLLRNNDEEAFEEIYHRYWDKLLAIGYNHARNKELAEEIVHDVLLSLWNRRHQMEIDRLAAWLATAVKFSVFKSLTRENRRKDLLQQHSPETPSAAFDEEIIQAKFLKEYVDGLVAGLPEQCRLVFVYSRDHQLSTKEIATTLNLSPKTVESHLTRALKTLRNLLGNYRFFTLVTVIIQIFLK
>NZ_CP042431.1|WP_158643762.1|771489_771732_+|hypothetical-protein
MILVAPSCASNVLPAVSRRMVDPSPSVSVALLPPGRIGSGLVAVITAVSFGSVAGLLSVNQAAAPNSSNTDAAICQLRLR
>NZ_CP042431.1|WP_147122039.1|770757_771378_-|DUF4974-domain-containing-protein
MPDGTHAWLNAASVLRFPIAFTGSERKVQLSGEAYFDVAKNPAMPFIVEATDAHGRELNTVEVLGTGFNVNAYDNEPTVKTTLVEGKVKVSNGGGSQQSVILTHSMQSIYSHDRGAAGNFRLRQVDTDDVVAWKNGLFNFNNADIKTVMRQLARWYDVEVVYEGVLPNEKFDGEISRNSTLAEVFNILELSAIHFKVEGRKVTVMP
>NZ_CP042431.1|WP_130542976.1|767142_770496_-|SusC/RagA-family-TonB-linked-outer-membrane-protein
MRLTAMLLLAGCLQVSASGNAQKVSIHRENASLKKVFTDIKKQTGYLFFYNARLLNDAEPVTLSVKDVEMKDVLALVLKDQPLSFKIVNRTIVISAKRKDEPETTPLVTDTIPSGFIVTGVIVDDSTSRPIEGASVIIRGTNKGVATNNKGNFNIAVKLGAVLMISYVGYEPQTYTVRNASIIQVRLKQGAAKDPLANVVVTGYQLINKESFTGNAVTVSGEELRKVNPVNVLQSIQAFDPSFRVLENNLSGSNPNRLPNINLRGSTALPTSTGDILSRANLQSNVNMPTFILDGYEVSVEKIYDLDNSRIQSITLLKDAAATAVYGSRAANGVVVITTKQPRAGKLQVYYNGDFTVNAPDLTDYHLLNAEQKLEYERLAGLYNSVGERSTDMQEALYYRKKQNVVSGVNTYWLSQPLRVALGQKHTIYLEGGGNGIRYGLDLRYQAQPGVMKESTRDRYSVGVDLAYNPNTNFLFKNTLSVTQMNATQSPWGNFSDYVRMNPYYPKTDSLGNILQEVDSWLIDTRRNGADQYVTDVVLNPMYRSTQHSFDKNKYTEFIDAFSAEWNIADGIRLRGLFSLTKRKHTYDQFTSPGDNYYYFTAPDKLNERGSYTYANSDETYVDGNITLGYNKQVGDHFFNATLGANIRTATQDFTSFTAIGFPNDRFTNIGFAMGYAEGAAPGGFSTTERLGGTFISGNYTYKNKYLFDATLRSDGSSKFGTEKKIATFWSLGAGWNVHKEANFNSRIISMLKLRASTGKTGTVNFAPNMAKTTFNYWSDWYSTGMGSIVANYGNPALKWQQTINTDAGVDLGLFQDRIMISPRYYHKLTKGMLSDITLAPSTGFSFYKANLGDMLNEGFELNLKAAVIKTKEWMVNLNLNMARNTNKIILISNALKAYNDKVDEAQSSSYGSTPLVRYMEGQSLNTIYAVRSMGIDPQNGREIFLKKDGTYTYEWDVKDIVAVADNTPTADGFFGGSAAWKNFMLQVQFYTRFGGKDYNQTLVDRVENADPRYNVDSRVLGERWKKPGDIAKYKDIASTGSTMVSDRFVQRDNVLELSSVYLSYDFSKDFCKKLTMRNLRASFTMNDVYRWSSMTIERGLEYPFARSFTFSIQTSF
>NZ_CP042431.1|WP_147122037.1|766832_767132_-|hypothetical-protein
MQKYLIIIATLFLLASCNKWFDVKPEDQVTKDELFKTESGFMEALNGVYTACAMKNCMGLNCLPDCRKYWPRIFILNPTTGMGINKPPSTIIPIYVSFL
>NZ_CP042431.1|WP_147122035.1|765672_766743_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MNRQLVHGEALALRAYLHFDMLRLFAPSFASAPTGKAIPYVTTFSNQVTPMSTVTEALNSMVADLTAAKELLKPTDPILKGAYVVGYPSDTASKELVSPVLFQQNRRHRLNYYAVCGTLARVYLYLDKKQEALSNAKEVIDAKKFPFTKEQDFINADVKLKDRIMYPELVFCWYDNWHREKYAKRFETGFAGFYIKADAGDKLYEKGGVGGEDRRFKQWFNLINDNSMVRYELLKYKRDKETNRHPLVHPAIRLSELYYIAAEASWDTDPAKAQDYLNLVRAARGINVPVNTASKIVFMDELVKEVRKETYAEGQLFYLYKRLNRGILLETGATTPPSDKVFVLPLPNDELEYGQR
>NZ_CP042431.1|WP_130542978.1|764856_765660_-|DUF4843-domain-containing-protein
MKQVIFYTILIIFAGVACKKTPDFLYKAPLQNVYFDINPEDSVVYTFAYRPELGSDTVFLPVKLGGLRADSIRQFGVIVVDSNTTAQAGVHYEPFKENYSLPADSGVFRLPVILYNTDPSLQTQSVKLTLKLKPGAGLDTNINKLIKARVILSSKLEQPDWWNTWPLGTYSRIKHELFMIATGVTSMTKDGMDAPRNLFLVGRLNVMTADPFAWVNNNPDKGYVLTLRDDGNYDFFATSNPAKLILVRKDTGSGRFYFVDENGLDIN
>NZ_CP042431.1|WP_130542970.1|780834_781098_-|CRISPR-associated-endonuclease-Cas2
MYVILVYDIGEKRVGKMLKLCRQYLNWIQNSVFEGDITEVKLKELQQRAKSIMKVEEDSIIVFKSRDLKWLEKEIVGKEKNELTNFL
>NZ_CP042431.1|WP_130542969.1|781099_782104_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKTYYLFNAGRMSRKDNTLKFTPVDENGIEGQPKYIPVEGVSDFYCFGALDANSALYNFLGKEQIAVHFFDYYEHYTGSFMPKDYLLAGKMQIAQMKHYSNKTKRLTIARTFVEGATFNIIKNLRYYQSRGKDLAGLIEIIEGYCIQIQYATEIEMLMGIEGNIRQVYYTAFDTILNDFAMNGRSKQPPKNEVNALVSFGNMMCYSLCLGQIHHTQLNPTISFLHEPGYRRYSLALDLAEIFKPILVDRVIFKVLNKKEIQAKDFDVQVNSVVLKDTARKVFVRTFEERLSETIKHRSLNRNVSYKHLVKLECYKLTKHLLEMETYKPFKAWW
>NZ_CP042431.1|WP_130542968.1|782141_782645_-|Dna2/Cas4-domain-containing-protein
MQTTGTHIAYLHTCKRKLWLFANGIGMEHTSETVAEGKLIAETTYLDRARKYTELAIEGIKIDFYDAKNKVVHEVKKSDRVEEAHTAQVKYYLYILAKNGIDHLRAIVEYPKLKQREWVDWNDELLLIASKWEKDVQIIVNSESCPPVINARICKSCSYYELCYVDE
>NZ_CP042431.1|WP_130542967.1|782648_784949_-|CRISPR-associated-helicase-Cas3'
MSNHYFDRFFAKSDGVTTLEMHTRHVITAGKNLLQSLPLNTEEKIQWEEKLVRMAVLHDLGKIHKSFVGRLNGQNSGEIRHELVSLLFCINYLQLDDNELFAIATHHKGIVDTLSEMKGTLSIPQVSGYIEQWYELDKSIFEKENVQNWLNLFGLGMATIQQDLMKELPKNVKMFLNARYQKKVIQNWEQRKLFSLSRALLMAADHLGSARKENDIPKYKQLTIKDFQPNKAGILLPFRPFQEQLRRVTTDIILHAPTGSGKTEAALNWVFANQTENSRVFYLLPYTASINAMVSRLQKHYNEEVVTALHSKTLDFFYEQISQEYSNDKRDYQKLEREAKNRKSLSKELFYPVKVATLHQILKTSLKGKGWEFSLFDYKNALFIIDEFHTYDALLTGMLLATIKLFRKLFNAKFFFLSATIPEFMLQLIINEIYGGDQSKLIRPDRTKEQDRLVLDRKRHQLYCMNGATIENEISLIKSYLEDARSVLIIVNNVKTAQRLFKEIKFSGTVQLLHSGFNKRDRTEIEKAITNKDVSLRPQLLIATQAVEVSLDINYDIAFIENAPIDALIQRFGRINRGGEKRITPIDRDWDICNDTVPVYVFENSIGKTPFYDKKVLEDTWINLLKLNNCELGEDDLINVCNEVYKEGYNEVQQKDFVNGIKNSIINEFEEDWIAGHWRDWVGDVLTNNNQKIEVLCFNLIEEFQSKIAERRFLEANQLLVQVYRYEAEISKNRKPGETLVAINIKYDRNIGYYSIDKDLDEQFDI
>NZ_CP042431.1|WP_130542966.1|784945_785623_-|hypothetical-protein
MDKLLEIQLSGWTATPRLPFILSGNAICMHTPSYSLVLGIIGCCLGRVVHAGEVKLGFKYKYDTAAQDMETRHRLEFDGKRIKKHSKGTDAYMREFHTSPKLTVWIDRLDWKAYFDNPIGTPSLGRSQDILKIDKVTIVRVSKIEKGNLGGSLLPFTTGVQAGGQLVQLAEAYLENNEVGSGRTPLASKVFISIPHDNGAEIIFNNLYETKEEIPVSFYLHEFVK
>NZ_CP042431.1|WP_130542965.1|785615_786644_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MSKLNNITGALLIDATATFLNGAGLGVQEDKNRVIPKTYKEKINNRLEDVPYVSAQAWRRWLRDTTNEENNWNPSELRAVGKGSEKGTTNKISTELNPIEFPEDDLFGYMKAGDKTEESIQRTSPFKSSILKGIKNMRTINIDEAFVHLKEGTPLPYSTKFYSAHLEGFFNLEYYRLGVYDNLGSKQELSSEITKKHGEKFNQISLGGKFSRYELKNAEERRNTHAAGLLRGLAFLRGGAKQAAFGADVAPKVLILAGLLSANPIFNNLFIGTGEKPVLNIDLLIELSIDYKDKLATPIYVGFRKGYLQNEDEINERLKDGFVLASPVEIVNQFNKNHLTNG
>NZ_CP042431.1|WP_130542964.1|786661_788659_-|hypothetical-protein
MTIFKTYTGNAMLNNALMTIEALARLKSVSAITPSLLKELYHQVDLKETNKRLKNYTMLFTNNGPLHNNKGNDDRVYGSLFSTIVSNFESEGANICEISGLAFQTTFNEFYELALKEAGFSNKEIGSKDTNISRTWFPLIGSLGSDAQALPQAKFTVQIHPICIAVLQFLPLSALLYKRGILLVDSSNFELSREMVAQNTQTLSEKIQNISLKESVENVRDFSKGDYLLKALDILAEKEDFEETYSDLNMWSFSNSGTGANCEIDRIPNFLIRKLQRLYTNAKIDIELKGILAKNETAYSFIKSLEKNTDWSLLYPNVFGSGKKAIRYEGVSPEFMEAYYAEVGKTELLPTAKYIAGLIQQYKSKAFEKLLVKTDGWNDPEYKVELFRVLVKATEDNKWGLEQHIAILDNKDELPIKNTYYQFQKLIHYFTWKKVQSNTLPPIYVLNTKVLKACKWIISLIQKDDKVNAIKSNLTNPNENAKVGFNRIVFDALANTEIALEEVIEILYDEEYNYRKYGLNEVLRIFFSQTDQQEFEFENLKSNLNRDALLQNWIAKIKSFANDYRAYYFGRYQGSGNGGLPHNKFQKTIDPFIKENDNFYTLLIEAIFNTNQFIKEREHTKDDKWKMEDLMTNPLGNNNRNICVLAVKFLLKETSIKPLELSIIN
>NZ_CP042431.1|WP_130543239.1|788697_789480_-|CRISPR-associated-endoribonuclease-Cas6
MRFLITLTCQQTDLVIPINYQYPLSAVLYHIIARGDKDYASFLHQKGYGKGFKLFTFSQISCPFKIEGDRLKLLSQDLNFQVAFHLPQAMEPFVKGLFQCERIDIADKKSRTSFTVKSIESLPDPLQSVKELEIANIQVKPISPIVAGLQNEKGNYDFLSPDDARFKESLLYNWRNKIATCFDTQTASQALLMIDIILMKQPPKSRLMAIKADTREETKIRGWINFNLRVIAEKRFVKLLLNTGMGIYNSMGCGCIVKLD
>NZ_CP042431.1|WP_130542963.1|789974_791360_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MLGKLSGWDDTIVALATPSGVGAIGVIRLSGPTAFSIVNELFPSKNLLQQSSHTLHVGFIKDGEIALDEVVVALFKGPKSYTGEDVVEISCHGSPFIQEQVINACVSRGARLAKPGEFTQRAFLHGKLDLVQAEAVADLIASNTEASRKAALHNIRGGFSVVLQGLRERMLTFSALIELELDFSQEDVEFADRTQFFNLINEAERTVQHLLQSFQLGNVIKNGVQVAIIGKPNAGKSTLLNTLLNENRAIVSDIAGTTRDTIEETLNINGILFRLIDTAGIREHTSDVIESIGVEKSLEKMRQADVVVYLFDANEMSADELGTLVKDFKEQSIEFLLVGNKADKSSEESLLSTYASIDPKIFISAKSGWNVDELKDKLVEMVLHGSVQTEGTVVTNARHQHALQQVASSLSDIHRGLDDKIPGDLLALDIRRCLHYLGEITGEISNEDRLDYIFSKFCIGK
>NZ_CP042431.1|WP_130542962.1|791471_792302_-|energy-transducer-TonB
MEISNILTADVLDIIFDGKNKSYGAYELRKSYKRRMLLSLAGMLTIILFFIGTMLLANSKKERQATLMNVQDIELEKVNTEKEEVKPPPPPKPPEPPKQIATRIYTAPVISNEVRPEERPPENAELEEVKIGTQNIDGNPDDGTLAPPSMKGEGVSTGVIEEVVKKESDEPFMKVEIESSYPGGSEAWRRFLIKQLQRNYPQDAIDNGIQGTVIIQFIVDAEGNVSNVEALSGPEELRDAAIRVIQKSGKWIPAVQNKRHVKSYKKQPIGFLLANE

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Crispr_ID: NZ_CP042431_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042431_2

777566-780622

Unclear

Consensus_repeat	Method
ATTTCAATTCAACCTTTGTACGATTAACAG	CRISPRCasFinder
ATTTCAATTCAACCTTTGTACGATTAACAG	CRT
ATTTCAATTCAACCTTTGTACGATTAACAG	PILER-CR

46 spacers

cas2,cas1,cas4,cas3,cas7,cas6

The CRISPR arrays of NZ_CP042431_2

>merge|NZ_CP042431|2|777566-780622|CRISPRCasFinder,CRT,PILER-CR
ATTTCAATTCAACCTTTGTACGATTAACAGTGGAGCAGCTTGAAGGACAGATCGCTTCGGCCAAAATATTTCAATTCAACCTTTGTACGATTAATAGTTTGGAGATTTCCTTCGCATAAAACCGATCCCGTTATTTCACTTCAATCTATGTACGATTAACAGACAGTCGGCATTGTTAATAATCGCTTCCTTGATGATATTTCAATTCAACCTTTATAAGATTAAAAGTTTGGTGGCTATACCGGCACAATTATTTGCTCAAGTATTTCAATTCAACTTTTGTACGATTGACAGGGTACTTCTGCGCTCACTGCTTCCGCGACTATCCCATTTCAATTCAATCTTTGTACGATTAACAGCAGGACGGTCAGCCGAAAGGATTCAAAAATACTGAAATTTCAATTCAACCTTTGTACGATTAACAGGAAGAAACACAACGGAAAGAATGGCACAACTTACTCATTTCAATTCAACCTTTGTACGATTAACAGCAAAGATGCTGTCCGGATCCTGGCAAACGTTCCTTCATTTCAATTCAACCTTTGTACTATTAACAGCTGTATCATCGAGAGCGGCCTGCTGTGCAGTGGACACATTTCAATTCAACCTTTGTACGATTAACAGATCATACAGGTTGTCCGGGATCTCGTTGCCAGTCCAATTTCAATTCAACCTTTGTACGATTAACAGAGTGTCGGGTGCCATCGATGTATATACGGCTTCCATATTTCAATTCAACCTTTGTACGATTAACAGCAATATCGATGCGAATGTATAGTATCCTGCTGCTGGATTTCAATTCAACCTTTGTACGATTAACAGAGAACATACTCAGCAGTGTTCATCTGGTTACTATCATTTCAATTCAACCTTTGTACGATTAACAGTTTATCACCCTACGCATCTCCACTTCTGAAACTTTATTTCAATTCAACCTTTGTACGATTAACAGCTGACGGTGTCCAAAGTCTTGATCACGCTTTCAAAATTTCAATTCAACCTTTGTACGATTAACAGTTTACAAAGCCGGACGGCAATTCCGTATTAAAGCCCATTTCAATTCAACCTTTGTACGATTAACAGTTCCGTTAATTAATAAGTAGCATCCATTTACCACCATTTCAATTCAACCTTTGTACGATTAACAGGCTCTGGAATAAAGACGGAAAACTTACGCTCCGCACATTTCAATTCAACCTTTGTACGATTAACAGAGAACATACTCAGCAGTGTTCATCTGGTTACTATCATTTCAATTCAACCTTTGTACGATTAACAGTTTATCACCCTACGCATCTCCACTTCTGAAACTTTATTTCAATTCAACCTTTGTACGATTAACAGCTGACGGTGTCCAAAGTCTTGATCACGCTTTCAAAATTTCAATTCAACCTTTGTACGATTAACAGTTTACAAAGCCGGACGGCAATTCCGTATTAAAGCCCATTTCAATTCAACCTTTGTACGATTTACAGATTGATGAGCCGCCAAGCAGGAAAGATAATCAAACGATTTCAATTCAACCTTTGTACGATTAACAGCACATTGTTCGTAGAGAATTTGGTAAGCGATATCTCATTTCAATTCAACCTTTGTACGATTAACAGGAGGAAGTGCTAACAGCCTGCAAGTCTTTGATGATCTCATTTCAATTCAACCTTTGTACGATTAACAGAGGAAGTCCATTGGAAAGTGCCACCATTCAAACCAAATTTCAATTCAACCTTTGTACGATTAACAGATTGCTCTGCAGGCGCCCTGGTAATTGAGCTTTGCCAATTTCAATTCAACCTTTGTACGATTAACAGCTGACCAAAGCGGATTTGGCTCAGTTTTTATTAATACATTTCAATTCAACCTTTGTACGATTAACAGCACCATTCAAGGACAGGCATTCAGCACAAGACCTGATTTCAATTCAACCTTTGTACGATTAACAGTTTAAAGAAAAGAAAATGAGTCGTGTCGTTACTCAATTTCAATTCAACCTTTGTACGATTAACAGGGAATCAATCGCCAGAAAAGGCAAGACAGGTCAATAATTTCAATTCAACCTTTGTACGATTAACAGTCGCGCCGCCGAGCTGGATCACCAGGCCAATCTCTTTATTTCAATTCAACCTTTGTACGATTAACAGGAAAGAAACCAGAAGAAGATAATTATTCTTTTTTTAATTTCAATTCAACCTTTGTACGATTAACAGACCCGCTTTTCCCTCCTGCAAGGAAAACCCTATTCTATTTCAATTCAACCTTTGTACGATTAACAGCAGTTGGGGAAGTGGGATCAGAGATTGTTTCACAGAATTTCAATTCAACCTTTGTACGATTAACAGCTTATTGCTGCATAGAAATAAAGTAGTTCTTTCAATTTCAATTCAACCTTTGTACGATTAACAGCACTTAAACGACCTAAGTAATGAAAATTCAAAAAATTTCAATTCAACCTTTGTACGATTAACAGTTCGCCCATACACGCTTGCCGCTGCCATCATCTATAATTTCAATTCAACCTTTGTACGATTAACAGATTATCAGCACACACGGGGCTAGCACAGTTAATTACATTTCAATTCAACCTTTGTACGATTAACAGTTATTGATGGCCGGATTGGGGTTAGTAATTCAATGGAATTTCAATTCAACCTTTGTACGATTAACAGCGCCGGATCAAAGTTCTGCGGCTTGTAGATCAGCATATTTCAATTCAACCTTTGTACGATTAACAGCAATACATTATGAAGATTGATTTGCCTACAGACTTATTTCAATTCAACCTTTGTACGATTAACAGGAAATTAGGCATAAAGCCATTGAGGCTGCTTGCAATAATTTCAATTCAACCTTTGTACGATTAACAGTCCTCATAGATGTAGTTGGCTGCCTGATTGAACTGATTTCAATTCAACCTTTGTACGATTAACAGCCAGCATCTGGTTTTCTAACGTGGACCGCAAACCAATTTCAATTCAACCTTTGTACGATTAACAGCGTCAACCATCATGACAACAAAGCCGCAAGAATTTTATTTCAATTCAACCTTTGTACGATTAACAG

>NZ_CP042431|2|2|777566-780622|CRISPRCasFinder
ATTTCAATTCAACCTTTGTACGATTAACAG	TGGAGCAGCTTGAAGGACAGATCGCTTCGGCCAAAAT
ATTTCAATTCAACCTTTGTACGATTAATAG	TTTGGAGATTTCCTTCGCATAAAACCGATCCCGTT
ATTTCACTTCAATCTATGTACGATTAACAG	ACAGTCGGCATTGTTAATAATCGCTTCCTTGATGAT
ATTTCAATTCAACCTTTATAAGATTAAAAG	TTTGGTGGCTATACCGGCACAATTATTTGCTCAAGT
ATTTCAATTCAACTTTTGTACGATTGACAG	GGTACTTCTGCGCTCACTGCTTCCGCGACTATCCC
ATTTCAATTCAATCTTTGTACGATTAACAG	CAGGACGGTCAGCCGAAAGGATTCAAAAATACTGAA
ATTTCAATTCAACCTTTGTACGATTAACAG	GAAGAAACACAACGGAAAGAATGGCACAACTTACTC
ATTTCAATTCAACCTTTGTACGATTAACAG	CAAAGATGCTGTCCGGATCCTGGCAAACGTTCCTTC
ATTTCAATTCAACCTTTGTACTATTAACAG	CTGTATCATCGAGAGCGGCCTGCTGTGCAGTGGACAC
ATTTCAATTCAACCTTTGTACGATTAACAG	ATCATACAGGTTGTCCGGGATCTCGTTGCCAGTCCA
ATTTCAATTCAACCTTTGTACGATTAACAG	AGTGTCGGGTGCCATCGATGTATATACGGCTTCCAT
ATTTCAATTCAACCTTTGTACGATTAACAG	CAATATCGATGCGAATGTATAGTATCCTGCTGCTGG
ATTTCAATTCAACCTTTGTACGATTAACAG	AGAACATACTCAGCAGTGTTCATCTGGTTACTATC
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTATCACCCTACGCATCTCCACTTCTGAAACTTT
ATTTCAATTCAACCTTTGTACGATTAACAG	CTGACGGTGTCCAAAGTCTTGATCACGCTTTCAAA
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTACAAAGCCGGACGGCAATTCCGTATTAAAGCCC
ATTTCAATTCAACCTTTGTACGATTAACAG	TTCCGTTAATTAATAAGTAGCATCCATTTACCACC
ATTTCAATTCAACCTTTGTACGATTAACAG	GCTCTGGAATAAAGACGGAAAACTTACGCTCCGCAC
ATTTCAATTCAACCTTTGTACGATTAACAG	AGAACATACTCAGCAGTGTTCATCTGGTTACTATC
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTATCACCCTACGCATCTCCACTTCTGAAACTTT
ATTTCAATTCAACCTTTGTACGATTAACAG	CTGACGGTGTCCAAAGTCTTGATCACGCTTTCAAA
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTACAAAGCCGGACGGCAATTCCGTATTAAAGCCC
ATTTCAATTCAACCTTTGTACGATTTACAG	ATTGATGAGCCGCCAAGCAGGAAAGATAATCAAACG
ATTTCAATTCAACCTTTGTACGATTAACAG	CACATTGTTCGTAGAGAATTTGGTAAGCGATATCTC
ATTTCAATTCAACCTTTGTACGATTAACAG	GAGGAAGTGCTAACAGCCTGCAAGTCTTTGATGATCTC
ATTTCAATTCAACCTTTGTACGATTAACAG	AGGAAGTCCATTGGAAAGTGCCACCATTCAAACCAA
ATTTCAATTCAACCTTTGTACGATTAACAG	ATTGCTCTGCAGGCGCCCTGGTAATTGAGCTTTGCCA
ATTTCAATTCAACCTTTGTACGATTAACAG	CTGACCAAAGCGGATTTGGCTCAGTTTTTATTAATAC
ATTTCAATTCAACCTTTGTACGATTAACAG	CACCATTCAAGGACAGGCATTCAGCACAAGACCTG
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTAAAGAAAAGAAAATGAGTCGTGTCGTTACTCA
ATTTCAATTCAACCTTTGTACGATTAACAG	GGAATCAATCGCCAGAAAAGGCAAGACAGGTCAATA
ATTTCAATTCAACCTTTGTACGATTAACAG	TCGCGCCGCCGAGCTGGATCACCAGGCCAATCTCTTT
ATTTCAATTCAACCTTTGTACGATTAACAG	GAAAGAAACCAGAAGAAGATAATTATTCTTTTTTTA
ATTTCAATTCAACCTTTGTACGATTAACAG	ACCCGCTTTTCCCTCCTGCAAGGAAAACCCTATTCT
ATTTCAATTCAACCTTTGTACGATTAACAG	CAGTTGGGGAAGTGGGATCAGAGATTGTTTCACAGA
ATTTCAATTCAACCTTTGTACGATTAACAG	CTTATTGCTGCATAGAAATAAAGTAGTTCTTTCA
ATTTCAATTCAACCTTTGTACGATTAACAG	CACTTAAACGACCTAAGTAATGAAAATTCAAAAA
ATTTCAATTCAACCTTTGTACGATTAACAG	TTCGCCCATACACGCTTGCCGCTGCCATCATCTATA
ATTTCAATTCAACCTTTGTACGATTAACAG	ATTATCAGCACACACGGGGCTAGCACAGTTAATTAC
ATTTCAATTCAACCTTTGTACGATTAACAG	TTATTGATGGCCGGATTGGGGTTAGTAATTCAATGGA
ATTTCAATTCAACCTTTGTACGATTAACAG	CGCCGGATCAAAGTTCTGCGGCTTGTAGATCAGCAT
ATTTCAATTCAACCTTTGTACGATTAACAG	CAATACATTATGAAGATTGATTTGCCTACAGACTT
ATTTCAATTCAACCTTTGTACGATTAACAG	GAAATTAGGCATAAAGCCATTGAGGCTGCTTGCAATA
ATTTCAATTCAACCTTTGTACGATTAACAG	TCCTCATAGATGTAGTTGGCTGCCTGATTGAACTG
ATTTCAATTCAACCTTTGTACGATTAACAG	CCAGCATCTGGTTTTCTAACGTGGACCGCAAACCA
ATTTCAATTCAACCTTTGTACGATTAACAG	CGTCAACCATCATGACAACAAAGCCGCAAGAATTTT
ATTTCAATTCAACCTTTGTACGATTAACAG

>NZ_CP042431|2|1|777566-780622|CRT
ATTTCAATTCAACCTTTGTACGATTAACAG	TGGAGCAGCTTGAAGGACAGATCGCTTCGGCCAAAAT
ATTTCAATTCAACCTTTGTACGATTAATAG	TTTGGAGATTTCCTTCGCATAAAACCGATCCCGTT
ATTTCACTTCAATCTATGTACGATTAACAG	ACAGTCGGCATTGTTAATAATCGCTTCCTTGATGAT
ATTTCAATTCAACCTTTATAAGATTAAAAG	TTTGGTGGCTATACCGGCACAATTATTTGCTCAAGT
ATTTCAATTCAACTTTTGTACGATTGACAG	GGTACTTCTGCGCTCACTGCTTCCGCGACTATCCC
ATTTCAATTCAATCTTTGTACGATTAACAG	CAGGACGGTCAGCCGAAAGGATTCAAAAATACTGAA
ATTTCAATTCAACCTTTGTACGATTAACAG	GAAGAAACACAACGGAAAGAATGGCACAACTTACTC
ATTTCAATTCAACCTTTGTACGATTAACAG	CAAAGATGCTGTCCGGATCCTGGCAAACGTTCCTTC
ATTTCAATTCAACCTTTGTACTATTAACAG	CTGTATCATCGAGAGCGGCCTGCTGTGCAGTGGACAC
ATTTCAATTCAACCTTTGTACGATTAACAG	ATCATACAGGTTGTCCGGGATCTCGTTGCCAGTCCA
ATTTCAATTCAACCTTTGTACGATTAACAG	AGTGTCGGGTGCCATCGATGTATATACGGCTTCCAT
ATTTCAATTCAACCTTTGTACGATTAACAG	CAATATCGATGCGAATGTATAGTATCCTGCTGCTGG
ATTTCAATTCAACCTTTGTACGATTAACAG	AGAACATACTCAGCAGTGTTCATCTGGTTACTATC
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTATCACCCTACGCATCTCCACTTCTGAAACTTT
ATTTCAATTCAACCTTTGTACGATTAACAG	CTGACGGTGTCCAAAGTCTTGATCACGCTTTCAAA
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTACAAAGCCGGACGGCAATTCCGTATTAAAGCCC
ATTTCAATTCAACCTTTGTACGATTAACAG	TTCCGTTAATTAATAAGTAGCATCCATTTACCACC
ATTTCAATTCAACCTTTGTACGATTAACAG	GCTCTGGAATAAAGACGGAAAACTTACGCTCCGCAC
ATTTCAATTCAACCTTTGTACGATTAACAG	AGAACATACTCAGCAGTGTTCATCTGGTTACTATC
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTATCACCCTACGCATCTCCACTTCTGAAACTTT
ATTTCAATTCAACCTTTGTACGATTAACAG	CTGACGGTGTCCAAAGTCTTGATCACGCTTTCAAA
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTACAAAGCCGGACGGCAATTCCGTATTAAAGCCC
ATTTCAATTCAACCTTTGTACGATTTACAG	ATTGATGAGCCGCCAAGCAGGAAAGATAATCAAACG
ATTTCAATTCAACCTTTGTACGATTAACAG	CACATTGTTCGTAGAGAATTTGGTAAGCGATATCTC
ATTTCAATTCAACCTTTGTACGATTAACAG	GAGGAAGTGCTAACAGCCTGCAAGTCTTTGATGATCTC
ATTTCAATTCAACCTTTGTACGATTAACAG	AGGAAGTCCATTGGAAAGTGCCACCATTCAAACCAA
ATTTCAATTCAACCTTTGTACGATTAACAG	ATTGCTCTGCAGGCGCCCTGGTAATTGAGCTTTGCCA
ATTTCAATTCAACCTTTGTACGATTAACAG	CTGACCAAAGCGGATTTGGCTCAGTTTTTATTAATAC
ATTTCAATTCAACCTTTGTACGATTAACAG	CACCATTCAAGGACAGGCATTCAGCACAAGACCTG
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTAAAGAAAAGAAAATGAGTCGTGTCGTTACTCA
ATTTCAATTCAACCTTTGTACGATTAACAG	GGAATCAATCGCCAGAAAAGGCAAGACAGGTCAATA
ATTTCAATTCAACCTTTGTACGATTAACAG	TCGCGCCGCCGAGCTGGATCACCAGGCCAATCTCTTT
ATTTCAATTCAACCTTTGTACGATTAACAG	GAAAGAAACCAGAAGAAGATAATTATTCTTTTTTTA
ATTTCAATTCAACCTTTGTACGATTAACAG	ACCCGCTTTTCCCTCCTGCAAGGAAAACCCTATTCT
ATTTCAATTCAACCTTTGTACGATTAACAG	CAGTTGGGGAAGTGGGATCAGAGATTGTTTCACAGA
ATTTCAATTCAACCTTTGTACGATTAACAG	CTTATTGCTGCATAGAAATAAAGTAGTTCTTTCA
ATTTCAATTCAACCTTTGTACGATTAACAG	CACTTAAACGACCTAAGTAATGAAAATTCAAAAA
ATTTCAATTCAACCTTTGTACGATTAACAG	TTCGCCCATACACGCTTGCCGCTGCCATCATCTATA
ATTTCAATTCAACCTTTGTACGATTAACAG	ATTATCAGCACACACGGGGCTAGCACAGTTAATTAC
ATTTCAATTCAACCTTTGTACGATTAACAG	TTATTGATGGCCGGATTGGGGTTAGTAATTCAATGGA
ATTTCAATTCAACCTTTGTACGATTAACAG	CGCCGGATCAAAGTTCTGCGGCTTGTAGATCAGCAT
ATTTCAATTCAACCTTTGTACGATTAACAG	CAATACATTATGAAGATTGATTTGCCTACAGACTT
ATTTCAATTCAACCTTTGTACGATTAACAG	GAAATTAGGCATAAAGCCATTGAGGCTGCTTGCAATA
ATTTCAATTCAACCTTTGTACGATTAACAG	TCCTCATAGATGTAGTTGGCTGCCTGATTGAACTG
ATTTCAATTCAACCTTTGTACGATTAACAG	CCAGCATCTGGTTTTCTAACGTGGACCGCAAACCA
ATTTCAATTCAACCTTTGTACGATTAACAG	CGTCAACCATCATGACAACAAAGCCGCAAGAATTTT
ATTTCAATTCAACCTTTGTACGATTAACAG

>NZ_CP042431|2|1|777830-780622|PILER-CR
ATTTCAATTCAACTTTTGTACGATTGACAG	GGTACTTCTGCGCTCACTGCTTCCGCGACTATCCC
ATTTCAATTCAATCTTTGTACGATTAACAG	CAGGACGGTCAGCCGAAAGGATTCAAAAATACTGAA
ATTTCAATTCAACCTTTGTACGATTAACAG	GAAGAAACACAACGGAAAGAATGGCACAACTTACTC
ATTTCAATTCAACCTTTGTACGATTAACAG	CAAAGATGCTGTCCGGATCCTGGCAAACGTTCCTTC
ATTTCAATTCAACCTTTGTACTATTAACAG	CTGTATCATCGAGAGCGGCCTGCTGTGCAGTGGACAC
ATTTCAATTCAACCTTTGTACGATTAACAG	ATCATACAGGTTGTCCGGGATCTCGTTGCCAGTCCA
ATTTCAATTCAACCTTTGTACGATTAACAG	AGTGTCGGGTGCCATCGATGTATATACGGCTTCCAT
ATTTCAATTCAACCTTTGTACGATTAACAG	CAATATCGATGCGAATGTATAGTATCCTGCTGCTGG
ATTTCAATTCAACCTTTGTACGATTAACAG	AGAACATACTCAGCAGTGTTCATCTGGTTACTATC
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTATCACCCTACGCATCTCCACTTCTGAAACTTT
ATTTCAATTCAACCTTTGTACGATTAACAG	CTGACGGTGTCCAAAGTCTTGATCACGCTTTCAAA
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTACAAAGCCGGACGGCAATTCCGTATTAAAGCCC
ATTTCAATTCAACCTTTGTACGATTAACAG	TTCCGTTAATTAATAAGTAGCATCCATTTACCACC
ATTTCAATTCAACCTTTGTACGATTAACAG	GCTCTGGAATAAAGACGGAAAACTTACGCTCCGCAC
ATTTCAATTCAACCTTTGTACGATTAACAG	AGAACATACTCAGCAGTGTTCATCTGGTTACTATC
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTATCACCCTACGCATCTCCACTTCTGAAACTTT
ATTTCAATTCAACCTTTGTACGATTAACAG	CTGACGGTGTCCAAAGTCTTGATCACGCTTTCAAA
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTACAAAGCCGGACGGCAATTCCGTATTAAAGCCC
ATTTCAATTCAACCTTTGTACGATTTACAG	ATTGATGAGCCGCCAAGCAGGAAAGATAATCAAACG
ATTTCAATTCAACCTTTGTACGATTAACAG	CACATTGTTCGTAGAGAATTTGGTAAGCGATATCTC
ATTTCAATTCAACCTTTGTACGATTAACAG	GAGGAAGTGCTAACAGCCTGCAAGTCTTTGATGATCTC
ATTTCAATTCAACCTTTGTACGATTAACAG	AGGAAGTCCATTGGAAAGTGCCACCATTCAAACCAA
ATTTCAATTCAACCTTTGTACGATTAACAG	ATTGCTCTGCAGGCGCCCTGGTAATTGAGCTTTGCCA
ATTTCAATTCAACCTTTGTACGATTAACAG	CTGACCAAAGCGGATTTGGCTCAGTTTTTATTAATAC
ATTTCAATTCAACCTTTGTACGATTAACAG	CACCATTCAAGGACAGGCATTCAGCACAAGACCTG
ATTTCAATTCAACCTTTGTACGATTAACAG	TTTAAAGAAAAGAAAATGAGTCGTGTCGTTACTCA
ATTTCAATTCAACCTTTGTACGATTAACAG	GGAATCAATCGCCAGAAAAGGCAAGACAGGTCAATA
ATTTCAATTCAACCTTTGTACGATTAACAG	TCGCGCCGCCGAGCTGGATCACCAGGCCAATCTCTTT
ATTTCAATTCAACCTTTGTACGATTAACAG	GAAAGAAACCAGAAGAAGATAATTATTCTTTTTTTA
ATTTCAATTCAACCTTTGTACGATTAACAG	ACCCGCTTTTCCCTCCTGCAAGGAAAACCCTATTCT
ATTTCAATTCAACCTTTGTACGATTAACAG	CAGTTGGGGAAGTGGGATCAGAGATTGTTTCACAGA
ATTTCAATTCAACCTTTGTACGATTAACAG	CTTATTGCTGCATAGAAATAAAGTAGTTCTTTCA
ATTTCAATTCAACCTTTGTACGATTAACAG	CACTTAAACGACCTAAGTAATGAAAATTCAAAAA
ATTTCAATTCAACCTTTGTACGATTAACAG	TTCGCCCATACACGCTTGCCGCTGCCATCATCTATA
ATTTCAATTCAACCTTTGTACGATTAACAG	ATTATCAGCACACACGGGGCTAGCACAGTTAATTAC
ATTTCAATTCAACCTTTGTACGATTAACAG	TTATTGATGGCCGGATTGGGGTTAGTAATTCAATGGA
ATTTCAATTCAACCTTTGTACGATTAACAG	CGCCGGATCAAAGTTCTGCGGCTTGTAGATCAGCAT
ATTTCAATTCAACCTTTGTACGATTAACAG	CAATACATTATGAAGATTGATTTGCCTACAGACTT
ATTTCAATTCAACCTTTGTACGATTAACAG	GAAATTAGGCATAAAGCCATTGAGGCTGCTTGCAATA
ATTTCAATTCAACCTTTGTACGATTAACAG	TCCTCATAGATGTAGTTGGCTGCCTGATTGAACTG
ATTTCAATTCAACCTTTGTACGATTAACAG	CCAGCATCTGGTTTTCTAACGTGGACCGCAAACCA
ATTTCAATTCAACCTTTGTACGATTAACAG	CGTCAACCATCATGACAACAAAGCCGCAAGAATTTT
ATTTCAATTCAACCTTTGTACGATTAACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042431.1\|WP_147122039.1\|770757_771378_-\|DUF4974-domain-containing-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP042431.1\|WP_130542962.1\|791471_792302_-\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555
NZ_CP042431.1\|WP_130542971.1\|776440_776803_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379639
NZ_CP042431.1\|WP_130542969.1\|781099_782104_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
NZ_CP042431.1\|WP_130542966.1\|784945_785623_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273860
NZ_CP042431.1\|WP_147122037.1\|766832_767132_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042431.1\|WP_158643762.1\|771489_771732_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042431.1\|WP_130542967.1\|782648_784949_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP042431.1\|WP_130542970.1\|780834_781098_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP042431.1\|WP_130542968.1\|782141_782645_-\|Dna2/Cas4-domain-containing-protein	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP042431.1\|WP_130542976.1\|767142_770496_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP042431.1\|WP_130542963.1\|789974_791360_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl\|CDD\|235392
NZ_CP042431.1\|WP_130542973.1\|772731_773928_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP042431.1\|WP_130542964.1\|786661_788659_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042431.1\|WP_130542965.1\|785615_786644_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP042431.1\|WP_130543239.1\|788697_789480_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|187889
NZ_CP042431.1\|WP_130542978.1\|764856_765660_-\|DUF4843-domain-containing-protein	unknown	unknown	gnl\|CDD\|374383
NZ_CP042431.1\|WP_130542974.1\|772035_772632_-\|RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|274376
NZ_CP042431.1\|WP_130542972.1\|774044_776435_+\|immunoglobulin-domain-containing-protein	unknown	unknown	gnl\|CDD\|376100
NZ_CP042431.1\|WP_147122035.1\|765672_766743_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|185760

Protein	Function_ID	Function_description	E-value
NZ_CP042431.1\|WP_147122039.1\|770757_771378_-\|DUF4974-domain-containing-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	4.90539e-22
NZ_CP042431.1\|WP_130542971.1\|776440_776803_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379639	pfam14534, DUF4440, Domain of unknown function (DUF4440).	1.8112e-10
NZ_CP042431.1\|WP_130542969.1\|781099_782104_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.23221e-162
NZ_CP042431.1\|WP_130542965.1\|785615_786644_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	7.62984e-35
NZ_CP042431.1\|WP_130542966.1\|784945_785623_-\|hypothetical-protein	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	4.38673e-17
NZ_CP042431.1\|WP_130542967.1\|782648_784949_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	1.38141e-52
NZ_CP042431.1\|WP_130542970.1\|780834_781098_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.93896e-30
NZ_CP042431.1\|WP_130542968.1\|782141_782645_-\|Dna2/Cas4-domain-containing-protein	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	2.95656e-56
NZ_CP042431.1\|WP_130542976.1\|767142_770496_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	3.2289e-175
NZ_CP042431.1\|WP_130542963.1\|789974_791360_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl\|CDD\|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0
NZ_CP042431.1\|WP_130542973.1\|772731_773928_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	2.52736e-29
NZ_CP042431.1\|WP_130543239.1\|788697_789480_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187889	cd09759, Cas6_I-A, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	3.78079e-21
NZ_CP042431.1\|WP_130542962.1\|791471_792302_-\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	8.21948e-15
NZ_CP042431.1\|WP_130542978.1\|764856_765660_-\|DUF4843-domain-containing-protein	gnl\|CDD\|374383	pfam16132, DUF4843, Domain of unknown function (DUF4843). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various Bacteroides species. Distant homology analysis suggest distant relation between this family and other families of proteins with immunoglobulin-like folds, which are often involved in substrate binding. However, specific function of this family is unknown. There is distant homology to the Calx-beta family pfam03160.	1.25844e-56
NZ_CP042431.1\|WP_130542974.1\|772035_772632_-\|RNA-polymerase-sigma-70-factor	gnl\|CDD\|274376	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found primarily in the genus Bacteroides. This family appears to have resulted from a lineage-specific expansion as B. thetaiotaomicron VPI-5482, Bacteroides forsythus ATCC 43037, Bacteroides fragilis YCH46 and Bacteroides fragilis NCTC 9343 contain 25, 12, 24 and 23 members, respectively. There are currentlyonly two known members of this family outside of the Bacteroides, in Rhodopseudomonas and Bradyrhizobium.	8.80121e-43
NZ_CP042431.1\|WP_130542972.1\|774044_776435_+\|immunoglobulin-domain-containing-protein	gnl\|CDD\|376100	pfam18676, MBG_2, MBG domain (YGX type). This domain is found in a variety of bacterial extracellular proteins. This domain is related to the MBG domain (pfam17883). But it replaces the characteristic YDG motif close the N-terminus with a YGX motif.	3.06323e-17
NZ_CP042431.1\|WP_147122035.1\|765672_766743_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|185760	cd08977, SusD, starch binding outer membrane protein SusD. SusD-like proteins from Bacteroidetes, members of the human distal gut microbiota, are part of the starch utilization system (Sus). Sus is one of the large clusters of glycosyl hydrolases, called polysaccharide utilization loci (PULs), which play an important role in polysaccharide recognition and uptake, and it is needed for growth on amylose, amylopectin, pullulan, and maltooligosaccharides. SusD, together with SusC, a predicted beta-barrel porin, forms the minimum outer-membrane starch-binding complex. The adult human distal gut microbiota is essential for digestion of a large variety of dietary polysaccharides, for which humans lack the necessary glycosyl hydrolases.	9.24505e-18

>NZ_CP042431.1|WP_130542971.1|776440_776803_-|nuclear-transport-factor-2-family-protein
MQNIATTIDQFRAAVLDSNTTTLHQLLSDTLSYGHSDGHVEGKNDFIQKISDGTYKFLTMDLTAQTITETESFAIVRHELDAQTFDEQKAGEAHLYVLLVWTKYEDGWKLIARQAVKKLR
>NZ_CP042431.1|WP_130542972.1|774044_776435_+|immunoglobulin-domain-containing-protein
MRIFYLTTILVMFAHTWLNFENRNTNSSAIYNSTNETTVARTGGEWDDFTSCGFANAQSNSTTAVCVLCSIQDAANTTDSDTLNYSVLSIPLAAGSGSVQQQMIFPSVYAPGTNVKIMLEFPAQVVDATLLSALEISSFNGATSNNDAYLGNSSQLQITPVAGSTRLSVLFTAGAAFDRVQVKLRAGIVSALVKLNLYYARIYHEPPVISNTALEVCALTPVTLSATDAPGHFIEWTQEQAGGGSTIIGTGASINATGFTGSRTYYAQYVRSYDNCHTSPKTPVTITTIAAPQISLGPQSIQRQVNAAASFTIDVFNDDQLTYRWQSDAGSGFTDLTEGGSYENTATATLNIPAVAFSMNGYEYRCIISRCGQSDTSQAATLTITKLSQTISFVDQTNGSTVNVVYGDAAISGVANTTSSLAVAYQSSNTNVLSVNTTGSVSIKGAGTAVITASQAGDASYAPAQDISFTVQVGRKLLGITANTASKVYGTNDPPLTYSVSGLVNGDLESIITGGLKRDVGEDVSTYAIVQNTINAGNNYTIDYTGANFTITKASQVITWVQELEAGCNGINQITLTANSSSNLSVSYSVADNSIATVTGSTLTAAGPGSTSVTAGQAGDNNYLPATPVSIVFNNLRSSMIRQHWNDVLLFDNSGGEFVSWKWFKNNTEVSGQTQPYYSEKQSLHGTYYAIATDRAGNTLRTCPITISAGTAPVRNMRVYPNPAKAGNPVTVEINYPAGELQGARLVISHTNGTVVQEYNNVQPVMTIALPSSGQLFIVSIVLANGQRATVNVLAK
>NZ_CP042431.1|WP_130542973.1|772731_773928_+|TlpA-family-protein-disulfide-reductase
MKRIIFLICCFVPVCSLVAQSHKYALQFELKDFSLSTLPSLIVVVGGKDKSILKEVSGKKMELWIDSIVDYPMNVRVLYYPDCTSEMRKDIEADRIPRPSASANLFITDAVNPVIVKRDTIFLLQQNILQKKYQQLQDDIMVRVNQFNERTGNQLHQAYMATESQQEKDSIERLHDNMFKINAGRPNLDSVIMPCIQNNLNNVISLHAMSSYITQCRFFKFDIPGQTFQSFLHSMPAQLRQLRFWKELDEITKVIKSGRSLIGQKAPAFINLKDSSGKVVQLEQLKGKIVFVDFWASWCAPCMAQVPQLKAAYQKVKNNTVEFVGISLDESVNSWKQAIRNSQLNWINLTDLKGTNGLTAIQYKALLIPYNLLIDKNGVVVKENIPIEALEKTIEELL
>NZ_CP042431.1|WP_130542974.1|772035_772632_-|RNA-polymerase-sigma-70-factor
MRTSLYSSYSDEHLVVLLRNNDEEAFEEIYHRYWDKLLAIGYNHARNKELAEEIVHDVLLSLWNRRHQMEIDRLAAWLATAVKFSVFKSLTRENRRKDLLQQHSPETPSAAFDEEIIQAKFLKEYVDGLVAGLPEQCRLVFVYSRDHQLSTKEIATTLNLSPKTVESHLTRALKTLRNLLGNYRFFTLVTVIIQIFLK
>NZ_CP042431.1|WP_158643762.1|771489_771732_+|hypothetical-protein
MILVAPSCASNVLPAVSRRMVDPSPSVSVALLPPGRIGSGLVAVITAVSFGSVAGLLSVNQAAAPNSSNTDAAICQLRLR
>NZ_CP042431.1|WP_147122039.1|770757_771378_-|DUF4974-domain-containing-protein
MPDGTHAWLNAASVLRFPIAFTGSERKVQLSGEAYFDVAKNPAMPFIVEATDAHGRELNTVEVLGTGFNVNAYDNEPTVKTTLVEGKVKVSNGGGSQQSVILTHSMQSIYSHDRGAAGNFRLRQVDTDDVVAWKNGLFNFNNADIKTVMRQLARWYDVEVVYEGVLPNEKFDGEISRNSTLAEVFNILELSAIHFKVEGRKVTVMP
>NZ_CP042431.1|WP_130542976.1|767142_770496_-|SusC/RagA-family-TonB-linked-outer-membrane-protein
MRLTAMLLLAGCLQVSASGNAQKVSIHRENASLKKVFTDIKKQTGYLFFYNARLLNDAEPVTLSVKDVEMKDVLALVLKDQPLSFKIVNRTIVISAKRKDEPETTPLVTDTIPSGFIVTGVIVDDSTSRPIEGASVIIRGTNKGVATNNKGNFNIAVKLGAVLMISYVGYEPQTYTVRNASIIQVRLKQGAAKDPLANVVVTGYQLINKESFTGNAVTVSGEELRKVNPVNVLQSIQAFDPSFRVLENNLSGSNPNRLPNINLRGSTALPTSTGDILSRANLQSNVNMPTFILDGYEVSVEKIYDLDNSRIQSITLLKDAAATAVYGSRAANGVVVITTKQPRAGKLQVYYNGDFTVNAPDLTDYHLLNAEQKLEYERLAGLYNSVGERSTDMQEALYYRKKQNVVSGVNTYWLSQPLRVALGQKHTIYLEGGGNGIRYGLDLRYQAQPGVMKESTRDRYSVGVDLAYNPNTNFLFKNTLSVTQMNATQSPWGNFSDYVRMNPYYPKTDSLGNILQEVDSWLIDTRRNGADQYVTDVVLNPMYRSTQHSFDKNKYTEFIDAFSAEWNIADGIRLRGLFSLTKRKHTYDQFTSPGDNYYYFTAPDKLNERGSYTYANSDETYVDGNITLGYNKQVGDHFFNATLGANIRTATQDFTSFTAIGFPNDRFTNIGFAMGYAEGAAPGGFSTTERLGGTFISGNYTYKNKYLFDATLRSDGSSKFGTEKKIATFWSLGAGWNVHKEANFNSRIISMLKLRASTGKTGTVNFAPNMAKTTFNYWSDWYSTGMGSIVANYGNPALKWQQTINTDAGVDLGLFQDRIMISPRYYHKLTKGMLSDITLAPSTGFSFYKANLGDMLNEGFELNLKAAVIKTKEWMVNLNLNMARNTNKIILISNALKAYNDKVDEAQSSSYGSTPLVRYMEGQSLNTIYAVRSMGIDPQNGREIFLKKDGTYTYEWDVKDIVAVADNTPTADGFFGGSAAWKNFMLQVQFYTRFGGKDYNQTLVDRVENADPRYNVDSRVLGERWKKPGDIAKYKDIASTGSTMVSDRFVQRDNVLELSSVYLSYDFSKDFCKKLTMRNLRASFTMNDVYRWSSMTIERGLEYPFARSFTFSIQTSF
>NZ_CP042431.1|WP_147122037.1|766832_767132_-|hypothetical-protein
MQKYLIIIATLFLLASCNKWFDVKPEDQVTKDELFKTESGFMEALNGVYTACAMKNCMGLNCLPDCRKYWPRIFILNPTTGMGINKPPSTIIPIYVSFL
>NZ_CP042431.1|WP_147122035.1|765672_766743_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MNRQLVHGEALALRAYLHFDMLRLFAPSFASAPTGKAIPYVTTFSNQVTPMSTVTEALNSMVADLTAAKELLKPTDPILKGAYVVGYPSDTASKELVSPVLFQQNRRHRLNYYAVCGTLARVYLYLDKKQEALSNAKEVIDAKKFPFTKEQDFINADVKLKDRIMYPELVFCWYDNWHREKYAKRFETGFAGFYIKADAGDKLYEKGGVGGEDRRFKQWFNLINDNSMVRYELLKYKRDKETNRHPLVHPAIRLSELYYIAAEASWDTDPAKAQDYLNLVRAARGINVPVNTASKIVFMDELVKEVRKETYAEGQLFYLYKRLNRGILLETGATTPPSDKVFVLPLPNDELEYGQR
>NZ_CP042431.1|WP_130542978.1|764856_765660_-|DUF4843-domain-containing-protein
MKQVIFYTILIIFAGVACKKTPDFLYKAPLQNVYFDINPEDSVVYTFAYRPELGSDTVFLPVKLGGLRADSIRQFGVIVVDSNTTAQAGVHYEPFKENYSLPADSGVFRLPVILYNTDPSLQTQSVKLTLKLKPGAGLDTNINKLIKARVILSSKLEQPDWWNTWPLGTYSRIKHELFMIATGVTSMTKDGMDAPRNLFLVGRLNVMTADPFAWVNNNPDKGYVLTLRDDGNYDFFATSNPAKLILVRKDTGSGRFYFVDENGLDIN
>NZ_CP042431.1|WP_130542970.1|780834_781098_-|CRISPR-associated-endonuclease-Cas2
MYVILVYDIGEKRVGKMLKLCRQYLNWIQNSVFEGDITEVKLKELQQRAKSIMKVEEDSIIVFKSRDLKWLEKEIVGKEKNELTNFL
>NZ_CP042431.1|WP_130542969.1|781099_782104_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKTYYLFNAGRMSRKDNTLKFTPVDENGIEGQPKYIPVEGVSDFYCFGALDANSALYNFLGKEQIAVHFFDYYEHYTGSFMPKDYLLAGKMQIAQMKHYSNKTKRLTIARTFVEGATFNIIKNLRYYQSRGKDLAGLIEIIEGYCIQIQYATEIEMLMGIEGNIRQVYYTAFDTILNDFAMNGRSKQPPKNEVNALVSFGNMMCYSLCLGQIHHTQLNPTISFLHEPGYRRYSLALDLAEIFKPILVDRVIFKVLNKKEIQAKDFDVQVNSVVLKDTARKVFVRTFEERLSETIKHRSLNRNVSYKHLVKLECYKLTKHLLEMETYKPFKAWW
>NZ_CP042431.1|WP_130542968.1|782141_782645_-|Dna2/Cas4-domain-containing-protein
MQTTGTHIAYLHTCKRKLWLFANGIGMEHTSETVAEGKLIAETTYLDRARKYTELAIEGIKIDFYDAKNKVVHEVKKSDRVEEAHTAQVKYYLYILAKNGIDHLRAIVEYPKLKQREWVDWNDELLLIASKWEKDVQIIVNSESCPPVINARICKSCSYYELCYVDE
>NZ_CP042431.1|WP_130542967.1|782648_784949_-|CRISPR-associated-helicase-Cas3'
MSNHYFDRFFAKSDGVTTLEMHTRHVITAGKNLLQSLPLNTEEKIQWEEKLVRMAVLHDLGKIHKSFVGRLNGQNSGEIRHELVSLLFCINYLQLDDNELFAIATHHKGIVDTLSEMKGTLSIPQVSGYIEQWYELDKSIFEKENVQNWLNLFGLGMATIQQDLMKELPKNVKMFLNARYQKKVIQNWEQRKLFSLSRALLMAADHLGSARKENDIPKYKQLTIKDFQPNKAGILLPFRPFQEQLRRVTTDIILHAPTGSGKTEAALNWVFANQTENSRVFYLLPYTASINAMVSRLQKHYNEEVVTALHSKTLDFFYEQISQEYSNDKRDYQKLEREAKNRKSLSKELFYPVKVATLHQILKTSLKGKGWEFSLFDYKNALFIIDEFHTYDALLTGMLLATIKLFRKLFNAKFFFLSATIPEFMLQLIINEIYGGDQSKLIRPDRTKEQDRLVLDRKRHQLYCMNGATIENEISLIKSYLEDARSVLIIVNNVKTAQRLFKEIKFSGTVQLLHSGFNKRDRTEIEKAITNKDVSLRPQLLIATQAVEVSLDINYDIAFIENAPIDALIQRFGRINRGGEKRITPIDRDWDICNDTVPVYVFENSIGKTPFYDKKVLEDTWINLLKLNNCELGEDDLINVCNEVYKEGYNEVQQKDFVNGIKNSIINEFEEDWIAGHWRDWVGDVLTNNNQKIEVLCFNLIEEFQSKIAERRFLEANQLLVQVYRYEAEISKNRKPGETLVAINIKYDRNIGYYSIDKDLDEQFDI
>NZ_CP042431.1|WP_130542966.1|784945_785623_-|hypothetical-protein
MDKLLEIQLSGWTATPRLPFILSGNAICMHTPSYSLVLGIIGCCLGRVVHAGEVKLGFKYKYDTAAQDMETRHRLEFDGKRIKKHSKGTDAYMREFHTSPKLTVWIDRLDWKAYFDNPIGTPSLGRSQDILKIDKVTIVRVSKIEKGNLGGSLLPFTTGVQAGGQLVQLAEAYLENNEVGSGRTPLASKVFISIPHDNGAEIIFNNLYETKEEIPVSFYLHEFVK
>NZ_CP042431.1|WP_130542965.1|785615_786644_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MSKLNNITGALLIDATATFLNGAGLGVQEDKNRVIPKTYKEKINNRLEDVPYVSAQAWRRWLRDTTNEENNWNPSELRAVGKGSEKGTTNKISTELNPIEFPEDDLFGYMKAGDKTEESIQRTSPFKSSILKGIKNMRTINIDEAFVHLKEGTPLPYSTKFYSAHLEGFFNLEYYRLGVYDNLGSKQELSSEITKKHGEKFNQISLGGKFSRYELKNAEERRNTHAAGLLRGLAFLRGGAKQAAFGADVAPKVLILAGLLSANPIFNNLFIGTGEKPVLNIDLLIELSIDYKDKLATPIYVGFRKGYLQNEDEINERLKDGFVLASPVEIVNQFNKNHLTNG
>NZ_CP042431.1|WP_130542964.1|786661_788659_-|hypothetical-protein
MTIFKTYTGNAMLNNALMTIEALARLKSVSAITPSLLKELYHQVDLKETNKRLKNYTMLFTNNGPLHNNKGNDDRVYGSLFSTIVSNFESEGANICEISGLAFQTTFNEFYELALKEAGFSNKEIGSKDTNISRTWFPLIGSLGSDAQALPQAKFTVQIHPICIAVLQFLPLSALLYKRGILLVDSSNFELSREMVAQNTQTLSEKIQNISLKESVENVRDFSKGDYLLKALDILAEKEDFEETYSDLNMWSFSNSGTGANCEIDRIPNFLIRKLQRLYTNAKIDIELKGILAKNETAYSFIKSLEKNTDWSLLYPNVFGSGKKAIRYEGVSPEFMEAYYAEVGKTELLPTAKYIAGLIQQYKSKAFEKLLVKTDGWNDPEYKVELFRVLVKATEDNKWGLEQHIAILDNKDELPIKNTYYQFQKLIHYFTWKKVQSNTLPPIYVLNTKVLKACKWIISLIQKDDKVNAIKSNLTNPNENAKVGFNRIVFDALANTEIALEEVIEILYDEEYNYRKYGLNEVLRIFFSQTDQQEFEFENLKSNLNRDALLQNWIAKIKSFANDYRAYYFGRYQGSGNGGLPHNKFQKTIDPFIKENDNFYTLLIEAIFNTNQFIKEREHTKDDKWKMEDLMTNPLGNNNRNICVLAVKFLLKETSIKPLELSIIN
>NZ_CP042431.1|WP_130543239.1|788697_789480_-|CRISPR-associated-endoribonuclease-Cas6
MRFLITLTCQQTDLVIPINYQYPLSAVLYHIIARGDKDYASFLHQKGYGKGFKLFTFSQISCPFKIEGDRLKLLSQDLNFQVAFHLPQAMEPFVKGLFQCERIDIADKKSRTSFTVKSIESLPDPLQSVKELEIANIQVKPISPIVAGLQNEKGNYDFLSPDDARFKESLLYNWRNKIATCFDTQTASQALLMIDIILMKQPPKSRLMAIKADTREETKIRGWINFNLRVIAEKRFVKLLLNTGMGIYNSMGCGCIVKLD
>NZ_CP042431.1|WP_130542963.1|789974_791360_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MLGKLSGWDDTIVALATPSGVGAIGVIRLSGPTAFSIVNELFPSKNLLQQSSHTLHVGFIKDGEIALDEVVVALFKGPKSYTGEDVVEISCHGSPFIQEQVINACVSRGARLAKPGEFTQRAFLHGKLDLVQAEAVADLIASNTEASRKAALHNIRGGFSVVLQGLRERMLTFSALIELELDFSQEDVEFADRTQFFNLINEAERTVQHLLQSFQLGNVIKNGVQVAIIGKPNAGKSTLLNTLLNENRAIVSDIAGTTRDTIEETLNINGILFRLIDTAGIREHTSDVIESIGVEKSLEKMRQADVVVYLFDANEMSADELGTLVKDFKEQSIEFLLVGNKADKSSEESLLSTYASIDPKIFISAKSGWNVDELKDKLVEMVLHGSVQTEGTVVTNARHQHALQQVASSLSDIHRGLDDKIPGDLLALDIRRCLHYLGEITGEISNEDRLDYIFSKFCIGK
>NZ_CP042431.1|WP_130542962.1|791471_792302_-|energy-transducer-TonB
MEISNILTADVLDIIFDGKNKSYGAYELRKSYKRRMLLSLAGMLTIILFFIGTMLLANSKKERQATLMNVQDIELEKVNTEKEEVKPPPPPKPPEPPKQIATRIYTAPVISNEVRPEERPPENAELEEVKIGTQNIDGNPDDGTLAPPSMKGEGVSTGVIEEVVKKESDEPFMKVEIESSYPGGSEAWRRFLIKQLQRNYPQDAIDNGIQGTVIIQFIVDAEGNVSNVEALSGPEELRDAAIRVIQKSGKWIPAVQNKRHVKSYKKQPIGFLLANE

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Crispr_ID: NZ_CP042431_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042431_3

1943451-1943549

Orphan

Consensus_repeat	Method
TGAATATTTTATAAAAATGAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042431_3

>merge|NZ_CP042431|3|1943451-1943549|CRISPRCasFinder
TGAATATTTTATAAAAATGAACATAAGATCTGAAATTGTCGTATCTTGTTCAAATAATACAAATGTTCATGGTTCGTGAACATTTTATAAAAATGAACA

>NZ_CP042431|3|3|1943451-1943549|CRISPRCasFinder
TGAATATTTTATAAAAATGAACA	TAAGATCTGAAATTGTCGTATCTTGTTCAAATAATACAAATGTTCATGGTTCG
TGAACATTTTATAAAAATGAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042431.1\|WP_130542066.1\|1936962_1937448_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP042431.1\|WP_130542057.1\|1947224_1947728_-\|phenylacetate-CoA-oxygenase-subunit-PaaJ	unknown	unknown	gnl\|CDD\|131214
NZ_CP042431.1\|WP_130542059.1\|1945967_1946396_-\|hydroxyphenylacetyl-CoA-thioesterase-PaaI	unknown	unknown	gnl\|CDD\|131339
NZ_CP042431.1\|WP_130542056.1\|1947734_1948505_-\|phenylacetate-CoA-oxygenase-subunit-PaaC	unknown	unknown	gnl\|CDD\|368300
NZ_CP042431.1\|WP_158643814.1\|1935262_1936300_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226855
NZ_CP042431.1\|WP_130542072.1\|1930865_1931993_+\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|197318
NZ_CP042431.1\|WP_130542064.1\|1939864_1942279_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042431.1\|WP_130542055.1\|1948527_1948890_-\|1,2-phenylacetyl-CoA-epoxidase-subunit-B	unknown	unknown	gnl\|CDD\|237504
NZ_CP042431.1\|WP_130542054.1\|1948917_1949868_-\|1,2-phenylacetyl-CoA-epoxidase-subunit-A	unknown	unknown	gnl\|CDD\|184320
NZ_CP042431.1\|WP_130542063.1\|1942363_1943368_-\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237048
NZ_CP042431.1\|WP_130542053.1\|1950110_1951583_+\|glycoside-hydrolase-family-30-protein	unknown	unknown	gnl\|CDD\|307945
NZ_CP042431.1\|WP_130542061.1\|1944563_1945343_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227186
NZ_CP042431.1\|WP_130542067.1\|1936303_1936912_+\|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl\|CDD\|223200
NZ_CP042431.1\|WP_130542052.1\|1951679_1952762_-\|phenylacetate-CoA-oxygenase/reductase-subunit-PaaK	unknown	unknown	gnl\|CDD\|131215
NZ_CP042431.1\|WP_130542071.1\|1932061_1933555_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP042431.1\|WP_130542070.1\|1933597_1934560_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373352
NZ_CP042431.1\|WP_130542069.1\|1934562_1935240_-\|tRNA-(5-methylaminomethyl-2-thiouridine)(34)-methyltransferase-MnmD	unknown	unknown	gnl\|CDD\|226606
NZ_CP042431.1\|WP_130542065.1\|1937572_1939735_-\|S46-family-peptidase	unknown	unknown	gnl\|CDD\|371067
NZ_CP042431.1\|WP_130542060.1\|1945345_1945939_-\|transferase-hexapeptide-repeat-family-protein	unknown	unknown	gnl\|CDD\|100058
NZ_CP042431.1\|WP_130542058.1\|1946428_1947205_-\|2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA-isomerase	unknown	unknown	gnl\|CDD\|236163

Protein	Function_ID	Function_description	E-value
NZ_CP042431.1\|WP_130542066.1\|1936962_1937448_-\|hypothetical-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	4.94071e-07
NZ_CP042431.1\|WP_130542057.1\|1947224_1947728_-\|phenylacetate-CoA-oxygenase-subunit-PaaJ	gnl\|CDD\|131214	TIGR02159, Putative_12-phenylacetyl-CoA_epoxidase_subunit_D, phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. [Energy metabolism, Other].	7.2803e-62
NZ_CP042431.1\|WP_130542059.1\|1945967_1946396_-\|hydroxyphenylacetyl-CoA-thioesterase-PaaI	gnl\|CDD\|131339	TIGR02286, Acyl-coenzyme_A_thioesterase_PaaI, phenylacetic acid degradation protein PaaD. This member of the domain family TIGR00369 (which is, in turn, a member of the pfam03061 thioesterase superfamily) is nearly always found adjacent to other genes of the phenylacetic acid degradation pathway. Its function is currently unknown, but a role as a thioesterase is not inconsistent with the proposed overall pathway. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.	1.37035e-42
NZ_CP042431.1\|WP_130542056.1\|1947734_1948505_-\|phenylacetate-CoA-oxygenase-subunit-PaaC	gnl\|CDD\|368300	pfam05138, PaaA_PaaC, Phenylacetic acid catabolic protein. This family includes proteins such as PaaA and PaaC that are part of a catabolic pathway of phenylacetic acid. These proteins may form part of a dioxygenase complex.	5.19689e-121
NZ_CP042431.1\|WP_158643814.1\|1935262_1936300_+\|hypothetical-protein	gnl\|CDD\|226855	COG4447, COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor [General function prediction only].	2.5579e-09
NZ_CP042431.1\|WP_130542072.1\|1930865_1931993_+\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|197318	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps, proteins.	1.4959e-70
NZ_CP042431.1\|WP_130542067.1\|1936303_1936912_+\|DNA-3-methyladenine-glycosylase-2-family-protein	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	1.2004e-52
NZ_CP042431.1\|WP_130542055.1\|1948527_1948890_-\|1,2-phenylacetyl-CoA-epoxidase-subunit-B	gnl\|CDD\|237504	PRK13781, paaB, phenylacetate-CoA oxygenase subunit PaaB; Provisional.	1.49771e-65
NZ_CP042431.1\|WP_130542054.1\|1948917_1949868_-\|1,2-phenylacetyl-CoA-epoxidase-subunit-A	gnl\|CDD\|184320	PRK13778, paaA, phenylacetate-CoA oxygenase subunit PaaA; Provisional.	0
NZ_CP042431.1\|WP_130542063.1\|1942363_1943368_-\|GTPase-ObgE	gnl\|CDD\|237048	PRK12299, obgE, GTPase CgtA; Reviewed.	0
NZ_CP042431.1\|WP_130542053.1\|1950110_1951583_+\|glycoside-hydrolase-family-30-protein	gnl\|CDD\|307945	pfam02055, Glyco_hydro_30, Glycosyl hydrolase family 30 TIM-barrel domain.	5.68077e-80
NZ_CP042431.1\|WP_130542061.1\|1944563_1945343_+\|hypothetical-protein	gnl\|CDD\|227186	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction only].	5.77657e-23
NZ_CP042431.1\|WP_130542052.1\|1951679_1952762_-\|phenylacetate-CoA-oxygenase/reductase-subunit-PaaK	gnl\|CDD\|131215	TIGR02160, 12-phenylacetyl-CoA_epoxidase_subunit_E, phenylacetate-CoA oxygenase/reductase, PaaK subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. [Energy metabolism, Other].	3.08151e-155
NZ_CP042431.1\|WP_130542071.1\|1932061_1933555_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP042431.1\|WP_130542070.1\|1933597_1934560_+\|hypothetical-protein	gnl\|CDD\|373352	pfam14870, PSII_BNR, Photosynthesis system II assembly factor YCF48. YCF48 is one of several assembly factors of the photosynthesis system II. The photosynthesis system II occurs in Cyanobacteria that are Gram-negative bacteria performing oxygenic photosynthesis. One of the three membranes surrounding these bacteria is the inner thylakoid membrane (TM) system that is localized within the cell and houses the large pigment-protein complexes of the photosynthetic electron transfer chain, i.e. Photosystem (PS) II, PSI, the cytochrome b6f complex, and the ATP synthase. YCF48 is necessary for efficient assembly and repair of the PSII. YCF48 is found predominantly in the thykaloid membrane. It is a BNR repeat protein.	4.18782e-15
NZ_CP042431.1\|WP_130542069.1\|1934562_1935240_-\|tRNA-(5-methylaminomethyl-2-thiouridine)(34)-methyltransferase-MnmD	gnl\|CDD\|226606	COG4121, COG4121, Uncharacterized conserved protein [Function unknown].	4.88055e-31
NZ_CP042431.1\|WP_130542065.1\|1937572_1939735_-\|S46-family-peptidase	gnl\|CDD\|371067	pfam10459, Peptidase_S46, Peptidase S46. Dipeptidyl-peptidase 7 (DPP-7) is the best characterized member of this family. It is a serine peptidase that is located on the cell surface and is predicted to have two N-terminal transmembrane domains.	0
NZ_CP042431.1\|WP_130542060.1\|1945345_1945939_-\|transferase-hexapeptide-repeat-family-protein	gnl\|CDD\|100058	cd04745, LbH_paaY_like, paaY-like: This group is composed by uncharacterized proteins with similarity to the protein product of the E. coli paaY gene, which is part of the paa gene cluster responsible for phenylacetic acid degradation. Proteins in this group are expected to adopt the left-handed parallel beta-helix (LbH) structure. They contain imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Similarity to gamma carbonic anhydrase and Ferripyochelin Binding Protein (FBP) may suggest metal binding capacity.	3.66246e-87
NZ_CP042431.1\|WP_130542058.1\|1946428_1947205_-\|2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA-isomerase	gnl\|CDD\|236163	PRK08140, PRK08140, enoyl-CoA hydratase; Provisional.	2.15926e-133

>NZ_CP042431.1|WP_130542063.1|1942363_1943368_-|GTPase-ObgE
MEKSNFVDQIRIFCRSGHGGAGSKHFMRTKFNPQAGPDGGDGGRGGHIILRGNKNLWTLLHLRYYKNVLAENGEGGSGNNCTGRSGKDIIIEVPLGTVARDEETDELEAEILEDGQEIVWIRGGRGGLGNARFATPTNQAPEHAQPGEPGIEAWKVLELKVLADVGLVGFPNAGKSTLLSVISAAKPKIADYAFTTLTPQLGMVEYRGSQSFCVADLPGIIEGAAEGKGLGHRFLRHIERNSILLFVLPADSNDHMKEFQVLLNELEQYNPELLHKQFVIAVSKSDLLDDELKEAVSKELPQNVPHVFISAATNQGLSELKDLLWRTLNEPQQN
>NZ_CP042431.1|WP_130542064.1|1939864_1942279_-|hypothetical-protein
MLNRIKRIAGGLQYIGLRFLVFLSHLLKSFWLFFPGIIFVILAIWCFWILGQGKDLIIAFSENHEAKAFFLIAIGFWIYVTWFSSRIIATLKLRKQQEHLLKLIKTHPSAQTEKKIENVTYFELPVNWLNLWPKLIGYAGLLAIEVAVLQSPALGSNAISPGKALWYFLPGIGISIGLDRIVEKFALKNSPKQRLVFNCLLAAFLLASALVIIIPSSDILYLLWALLFLHAVYLFYINLRSRKKENGEDEKDSMFHRFMFRIMDWVRIPRKEIGYFQWFNLICIIGLGIYCAAFISLHTAKMIGPFPFVLLAFAVLGGIGNIVAAFSVKLSVNFHVLLILVALLVGSRETHFVRTKSFDNPANKGIYHQRQDILTYFSNWVNSRGAAIDSTKGKYPLYFVLANGGASRSGYWTASVLGKLEDTTEGLPSQFSKHLFCLSGTSGGGVGVATFFSLLHERKKLDSNLNVSYLRSARSFLEKDFLTFTLSHMLGPDYLKYIFHINNRTLPDRAGALEQTLEEDSHDIPDSLKPSMATPMSELLSIGDSACPLPVLCINTTRMQDGNPGVVTNIKMSKQIFNNRVDVLEALNDTLDMRLSTASILGARFPYISPAGRIDQVIPGKQRVNQNDSMLIHYFVDGGYFDNSGAGVVQEMIRAILLQSSTIKDSTFRKRVAKLEFTILHITNSPTGVAALNTVPPLRNDLLSPMLTIMGAYDMQTTVNDKRLENFLTDISDDGICAGAKYIPIHLYKDTEEKREDRKKGNKSKEAPYSMNWFISKMTLNRMDDRLTNQPNLNKMIKELTSTQ
>NZ_CP042431.1|WP_130542065.1|1937572_1939735_-|S46-family-peptidase
MKKFLVTIVLCCSLLRGMADEGMWLPMLLGQQVYNDMVKRGLKLTKEQLYSVNKASLKDAIIIFGGFCTGEIVSNEGLIFTNHHCGYDAIATASTVTANYLKEGFWAKTKQQEIPSAGLYADFLTKIEDVTAEVNAALSDLSGAERLAKQNAVIAEINKRYSDASKNIIGKVSPMFKGNQFLVFVYQRYNDIRLVGAPPESIGKYGGDTDNWEWPRHTGDFSVFRVYMGKDGASGEYSPGNVPLKPKHFLPVSLKGVKDGDYAMIYGYPGSTNRYESSMGVKQKTDIANPSIVNLRDMRLKYMLEEMKKDPATRLALASDYASIANYWKFFDGEAKQLLKYDVYGQKKAAEAKFQQWANGKSEYANIFSEWSKVYDNWRPYSKHQIYLNEGIMGSPLMGFAASLQQVENAIVKKGSSADISKAIEAAKEARAEFLKSENRVSDQNILGAALKMFYTNIDKNQHPIGFYDGVKGSFGSLDDDATYKKYAANVFNNTMLLNDSKWNAFTSNPDATVLQADPAYATASAFMKNWQGKYLPLFMQFNSRNSELGRLYLKGVLAMDTVKAKKMYPDATFTMRVSFGNVKSYSPADAVKYDYVTTMKGVLEKYKPGDYEFDLPAKLMELAKNKDYGQYADPVRKDLVVGFITTNDITGGNSGSPVIDANGNLIGLAFDGNYEALSHKIQFDPVFNRTICVDVRYVLWCIDKLGGASNIIKELKLVR
>NZ_CP042431.1|WP_130542066.1|1936962_1937448_-|hypothetical-protein
METSTTTDLLHDLEDEITYLPAPKGMRLVNFIIDMIVVTIINSVIGGMIQMMIFAAFISDIRTGSDFDLTYPIGLTIAIWVIQVGLFLSYYVIFEKMMNGRTVGKLVSGTMAVRKDGGLLTWKNVILRSLCRLIPLEFILAIFMEPLHDTLTGTVVVKKTL
>NZ_CP042431.1|WP_130542067.1|1936303_1936912_+|DNA-3-methyladenine-glycosylase-2-family-protein
MSYTIHLSKDKRFKKLMDGREPFVLKKRKDIPVYLCASIMSQQLSTKVADVIYNRFLALYGGKTPNPQQIIDTKPETLRSIGLSNAKVTYVQNVARFAIEQGLDLKTLNKMSNEEVVAYLTQIKGVGKWTAEMLLMFALGREDVFSPDDLGLQNAMISIYKLDREDKKAFREKLLSISAKWSPYRTYACLHLWHWKDNTPLK
>NZ_CP042431.1|WP_158643814.1|1935262_1936300_+|hypothetical-protein
MQQCQKNNIFNPLMNNCMVNGFKALLFVTVTGIMAASCVKGDNPIQRYEDPRNQGQGGVPVLGPGWSKVTIPLNSYDVVFVNDTLGFLASFRDGVYRSTNGGETWTRTNAQKSDYVNLFFLNEKYGWAVSVTKDIAKTTDSGKTWATTNTSYEFRDVFFRDENNGYASTYQGLIKTTDGGVTWALVPNAPKDVTSVYFIDEQNGFCGTEANGYRQTTDGGSSFTPVNGLPNEVFTTQFFKGTDAQKGVVVGSDGYVNKTTNNGATWTKGPKIKGDYFDFNFKDIDNGFVMTINNVFKVEGNTVTNVLFRPAADRNVHFWECDFNADLTRGWVVYNGGELYRYVKP
>NZ_CP042431.1|WP_130542069.1|1934562_1935240_-|tRNA-(5-methylaminomethyl-2-thiouridine)(34)-methyltransferase-MnmD
MERQIIPTADGSVTISIPASGITYHSKHGAIQESMHVFIGAGLHYILAKGITHNPLRILEMGFGTGLNALLVLQESIRTGSSVHYETIEAFPLENVVYTRLNYCDQLQAPELQPQFLRLHESAWDITHTVTDRFSFLKRNTTLEKFNSPGLFDLIFYDAFAPSAQPELWTEDVFRKLFDLLNPGGILTTYCSKGDVRRAMLAAGFTVEKIPGPPGKREMVRAGKA
>NZ_CP042431.1|WP_130542070.1|1933597_1934560_+|hypothetical-protein
MMIFRKAWLYYAFAGIILMYACSDKENDSDLLNPKSLFAKGWDSVHIGTRPIYDIQFPDPLIGFFVGNDVYKSIDGGKTWNQLNAQPTYYEGYQYASFPNVLNGWVVGYDGSIIRTNDGGKNWMKLQFSPKLLKTGKPFQIRFLDQYTGFIICDSGLLKSSDGGTTWAKVCSTLAGSALFFIDEQNGWIAEKDGILRTTDGINFTKTIVGKRFPSIFFLNKLDGFALDNSGTVFETNDGGVTWRLKHKVDVGEFAQDIQFFDKDNGYVSGTDGVAKISGMNVTSVVHAPDLWLYEMYFFNQDRGFVGSAFNTLIRFNAPK
>NZ_CP042431.1|WP_130542071.1|1932061_1933555_+|cysteine--tRNA-ligase
MSELKVLNSYTRQKEVFTPITPGHVGMYVCGPTVSGESHLGHARPFITFDVIYRYLLHLGYKVRYVRNITDAGHFEEEGRAAEDKISSKAVLEKLEPMELVQKYTNLFHWAMLQFNNLEPSIEPTATGHIVEQIEMIKAIIEAGYAYEVNGSVYFDVKKYAEHYPYGKLSGRVLDEQLETTRELDGQDEKRDKADFALWKAAPPEHIMRWVSPWGEGFPGWHIECSAMATKYLGGQFDIHGGGMDLQFPHHESEIAQSTICNKEVPARYWLHNNMITVNGKKMGKSYNNQIKLTEMFTGTHPLLEQAYSPMTIRFFILQTHYRSTLDFGNEALQAAEKGLKRLWEAYENLQKIEIPGNDAQPDVALNKKVNDLLSEMDDNMNDDFNTAKVLANIFEIVPVVNSIKDKHIPVTALSIATLERLKKYLHDYLESIFGLRSENEADNGKLSGVLDLLIDIRKDARSRKDYATSDKIRNQLQELGILLKDEKDGSVGYTFQ
>NZ_CP042431.1|WP_130542072.1|1930865_1931993_+|endonuclease/exonuclease/phosphatase-family-protein
MAIRTFARRFFIVSNVITVAVFLMACANVFLHPDKWWFIAILGLTFPFLLLLTLIFLVGWSLVRSRWIFLSLGALVLGYSNIRALVGFHFASGFQEAKKENTIRILTWNVKWFDEQTRENGRESHRREMLEFIRNENADVLCFQEYFEPGPLGPYSNYKEIRKMGYPYFYRVIDYGKEGAKTEMGSAIFSKYPILDSSRTIFKGPPRLRGAESLISCDLDVNGQTIRVFTTHLQSVLLQKKDYRDISIIRNAEDSIVEASRSLIRKLRMAYSQRGNQVDIVRNKLDSCPHPEIICGDFNDVPNSYTYFRIRGNRRDAFMEKEGGLGRTFSNISPTLRIDYIMPDKQFEVVQYKRKLLPYSDHYPVIADLRLGSGK
>NZ_CP042431.1|WP_130542061.1|1944563_1945343_+|hypothetical-protein
MQTSIIATPVLDMLNAFQKIVQKLEIDFYIVGAIARDIRLSANQGMMPKRQTKDVDIALFISSESQFNQLKEELLATGEFTAHPTEAIKLFFKQSIEVDLLPFGEIENKAREAKLEKPRLFVMDVPGFWEILPYAEAFDINGVEGLKVCTLEGLVLLKLIANDDTPSRIKDITDIEHIVSVYFELCMEDIFSHHADAAELYPTTANNYMELAASRIIGRKIRGILDQSEDLQKRILSILNKRTTGELWQAMANGMQDIE
>NZ_CP042431.1|WP_130542060.1|1945345_1945939_-|transferase-hexapeptide-repeat-family-protein
MIYAFKGFIPVIHESAFIHPQAAVTGNVIIGKNVYVGPGAAIRGDWGGIVIEDGCNVQENCTIHMFPGVTVLLKENAHIGHGAIIHGASIGKNCLIGMNSVIMDDVELGDECIVGALTMIKANEKFPARSLIVGNPGKVIKEVSDEMISWKTTGTALYQALPGEMRESWEAVEPLREIPANRPSQESLYKTWNELKK
>NZ_CP042431.1|WP_130542059.1|1945967_1946396_-|hydroxyphenylacetyl-CoA-thioesterase-PaaI
MNNDIRARQIAEKLLENDPFSQWLGIQIIDVKEGYCKLQMTLRAEMLNGFGITHGGIVFSFADSALAFSCNNRNNLSLAQDNSINFFKPSKAGDVLIAEAKELHNGRSTGLYLITIHNQQGEQVALFKGTCFRTGKVLFEGM
>NZ_CP042431.1|WP_130542058.1|1946428_1947205_-|2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA-isomerase
MSTILFTINEGVGVITLHRPDKLNSFNREMSLALQDTLDECADNPAIRAVYITGAGKGFSAGQDLSEIVGASALSMKQILSEHFNPIVERIRQLPKPVVAAVNGVAAGAGANIALCCDIVVAAQSASFIQAFSKIGLIPDSGGTFFLPRLIGWQKASALSMLGDKIQATEAEQMGMIYKVIPDEGFGSATLQLATTLAQMPTRGLALTKQALNQSFANNYSQQLELEDKLQQEAGDTDDYREGVNAFIEKRPPVFKGK
>NZ_CP042431.1|WP_130542057.1|1947224_1947728_-|phenylacetate-CoA-oxygenase-subunit-PaaJ
MSNVTDISTRQVWELLEAVTDPEVPVLTILDLGIVRDVKVENGTVTVVITPTYSGCPAMDVISMSIRMQLLSHGYKQVNISQVLSPAWTTDWMSEAGKEKLRAYGIAPPNPTQSVCSMELFADDEAVQCPHCSSWNTRRISEFGSTACKSLFQCNDCHEPFDYFKCH
>NZ_CP042431.1|WP_130542056.1|1947734_1948505_-|phenylacetate-CoA-oxygenase-subunit-PaaC
MQQTLINYSLYLADNSLILAQRNAEWCGHGPILEQDIALTNISLDLLGQARSFYQYAAQLINTDNPSATPASEDSLAYLRDVYNFRNCLITELPNGDWGQTILRQFFFSSWQFLLYQQMKLSSDQTLAAIAEKSLKEVTYHLRWSSEWVIRLGDGTEESHNKMTKALEELWSFTGEIFEPAPFEKAAVEAGFGIDPVSLKDAWMQKVTEILQEATLTVPAPRWMQTGGKEGKHSEHLGFVLAEMQFLQRAYPNATW
>NZ_CP042431.1|WP_130542055.1|1948527_1948890_-|1,2-phenylacetyl-CoA-epoxidase-subunit-B
MNINITKYYYGDIPEEKGGGNAAQTESSANWPLWEVFIRSKQGLDHKHVGSLHATDAQMAIENARDVYTRRMEGISIWVVESKYIHASNPDDAEAFYEPANDKVYRHPTFYDLPDEVKHM
>NZ_CP042431.1|WP_130542054.1|1948917_1949868_-|1,2-phenylacetyl-CoA-epoxidase-subunit-A
MSVQELEKIFQQKIDQEIKIEPKDWMPDAYRKTLVRQISQHAHSEIIGMLPEGNWITRAPSLKRKAILLAKVQDEAGHGLYLYAATETLGTSREQTMDDLISGKAKYSSIFNYPTLTWGDIGAVGWLVDGAAILNQVMLCRTSYGPYSRANIRICKEESFHQRQGFEILLVLSQGTPEQKAICQDAINRWWWPSLMMFGPKDGESTHSEQSTIWKIKRKSNDELRQQFVNMIAEQVKILGMTLPDPDLKYNEATKNYDFGEIDWNEFWNVVKGNGPCNKQRLDTRRKAHENGAWVRAAAEAHAAKRAARKQQQQVA
>NZ_CP042431.1|WP_130542053.1|1950110_1951583_+|glycoside-hydrolase-family-30-protein
MKFCILTVVVLGMASCQQNSQPQEKKTGGDSSTINMEGVRATVFTTADSSNFRLSVTDTIAFKAFGQPLESQPCVFVDPSTSFQTMVGIGGALTDASAETFAKLPKDKQQQFLTAYFSDKDGIGYTMARTNIHSCDFSSAPYTYVKEKDSSLSSFSIAHDLQFRVPFIQQAIAAAGGNLPLFASPWSPPAWMKDNNDLLHGGKLLPAYYQSWANYYVKFIQAYEKEKIPIWGLSIQNEPMARQRWESCIYTAEEERDFLKNYLGPTLEKAGMNDKKIIAWDHNRDLLYQRASTVLNDPDAAKYLWGIGFHWYETWTGGDPQFLNLQRVHEQYPSTNLIFTEGCNGPFNRNQINQWQWGEIYGRNMINDFNNGTCAWTDWNILLDETGGPNHVQNFCFAPVHADTKTGELIFMNAYYYIGHFSKFVKPGAKRIISSSSRSELLTTAFKNADGKMVVVVMNDSGKRIPYHLWIGGKAAELVSLPHSIVTIQW
>NZ_CP042431.1|WP_130542052.1|1951679_1952762_-|phenylacetate-CoA-oxygenase/reductase-subunit-PaaK
MATHFHSLTIADIRKETPECISVVFDIPESLKEAYSFRHGQNITLKSVVDGEELRRSYSICSSPGDKELRIAIKKMQDGRFSTWANATLKKGDILEVLPPTGKFYTELDPAHKKHYLAFAAGSGITPILSIIKTTLAIEPNSSFTLVYGNRNRGSIIFKEQLEALKNVFMSRFVVHHILSREKTDAAINYGRINAEKGKQLAAKLIDIHAIDDFFLCGPEEMIFEMKDWLEQEGIDKKKVHFELFTTPGQKAGTQKSAEEKAAFTGKVSKVTVKVDGIAFDFDLPYDGDPLLDAALKQGADLPFACKGGVCATCRAKVVEGAVSMDNNYALEPDELEGGFVLTCQSHPRSEKVIVDFDAR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042431_2	2.36\|779902\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779902-779935	34	CP022676	Bacillus megaterium strain SR7 plasmid p2, complete sequence	3204-3237	9	0.735
NZ_CP042431_2	2.36\|779902\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779902-779935	34	CP022676	Bacillus megaterium strain SR7 plasmid p2, complete sequence	13111-13144	9	0.735
NZ_CP042431_2	2.36\|779902\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779902-779935	34	CP022677	Bacillus megaterium strain SR7 plasmid p3, complete sequence	399-432	9	0.735
NZ_CP042431_2	2.36\|779902\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779902-779935	34	CP022678	Bacillus megaterium strain SR7 plasmid p4, complete sequence	1242-1275	9	0.735
NZ_CP042431_2	2.36\|779902\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779902-779935	34	CP022679	Bacillus megaterium strain SR7 plasmid p5, complete sequence	755-788	9	0.735
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP011655	Citrobacter freundii strain CAV1741 plasmid pCAV1741-110, complete sequence	52304-52337	9	0.735
NZ_CP042431_2	2.28\|779374\|37\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779374-779410	37	NZ_CP014235	Moraxella osloensis strain CCUG 350 plasmid unnamed4, complete sequence	64863-64899	10	0.73
NZ_CP042431_2	2.28\|779374\|37\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779374-779410	37	NZ_AP017382	Moraxella osloensis strain KMC41 plasmid pMOSL1, complete sequence	62686-62722	10	0.73
NZ_CP042431_2	2.28\|779374\|37\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779374-779410	37	NZ_CP024188	Moraxella osloensis strain TT16 plasmid p3, complete sequence	35556-35592	10	0.73
NZ_CP042431_2	2.28\|779374\|37\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779374-779410	37	NZ_CP024179	Moraxella osloensis strain YHS plasmid pYHS3, complete sequence	35904-35940	10	0.73
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP025894	Escherichia coli strain 503025 plasmid p503025_100, complete sequence	9837-9870	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP025868	Escherichia coli strain 504211 plasmid p504211_100, complete sequence	52278-52311	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP034755	Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p1, complete sequence	81729-81762	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	93505-93538	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP025870	Escherichia coli strain 503829 plasmid p503829_100, complete sequence	23997-24030	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029647	Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence	84637-84670	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_005815	Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, complete sequence	78644-78677	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP014707	Salmonella enterica subsp. enterica serovar Anatum strain USMARC-1735 plasmid pSAN1-1735, complete sequence	24917-24950	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP009714	Yersinia pestis Pestoides F plasmid pMT, complete sequence	70040-70073	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP009722	Yersinia pestis strain Shasta plasmid pMT, complete sequence	49388-49421	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP045259	Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pMT, complete sequence	25828-25861	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_003385	Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence	23429-23462	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_014022	Yersinia pestis Z176003 plasmid pMT1, complete sequence	72315-72348	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_017266	Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pMT, complete sequence	70681-70714	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP010386	Enterobacter hormaechei subsp. xiangfangensis strain 34399 plasmid p34399-121.660kb, complete sequence	63001-63034	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP033694	Yersinia pestis strain FDAARGOS_602 plasmid unnamed1, complete sequence	42645-42678	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_009378	Yersinia pestis Pestoides F plasmid MT, complete sequence	77749-77782	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP046272	Enterobacter hormaechei strain E70 plasmid pE70-A, complete sequence	24669-24702	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_006323	Yersinia pestis plasmid pG8786, complete sequence	75829-75862	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP045146	Yersinia pestis strain SCPM-O-B-6899 (231) plasmid pMT, complete sequence	25823-25856	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP045164	Yersinia pestis strain SCPM-O-B-6291 (C-25) plasmid pMT, complete sequence	25829-25862	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP045155	Yersinia pestis strain SCPM-O-B-5935 (I-1996) plasmid pMT, complete sequence	25828-25861	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP045159	Yersinia pestis subsp. pestis bv. Medievalis strain SCPM-O-B-6530 plasmid pMT, complete sequence	26539-26572	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP006746	Yersinia pestis 8787 plasmid pMT1, complete sequence	123862-123895	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP045150	Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pMT, complete sequence	25828-25861	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP032183	Citrobacter freundii strain AR_0116 plasmid unnamed5, complete sequence	98760-98793	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_017155	Yersinia pestis D106004 plasmid pMT1, complete sequence	72313-72346	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_017158	Yersinia pestis D182038 plasmid pMT1, complete sequence	74108-74141	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029859	Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence	94011-94044	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029847	Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence	18773-18806	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029916	Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence	63590-63623	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_004835	Yersinia pestis strain KIM5 plasmid pMT1, complete sequence	72380-72413	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029893	Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence	90799-90832	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP006760	Yersinia pestis 1413 plasmid pMT, complete sequence	123862-123895	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029876	Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence	82392-82425	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029884	Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence	66018-66051	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029849	Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence	70221-70254	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029929	Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence	27410-27443	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029865	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence	41516-41549	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP042573	Enterobacter hormaechei strain E5 plasmid pE5_002, complete sequence	23491-23524	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_LT883154	Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2	93399-93432	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP006752	Yersinia pestis 3067 plasmid pMT1, complete sequence	4939-4972	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_AP019819	Enterobacter hormaechei subsp. hoffmannii strain OIPH-N069 plasmid pN069_2, complete sequence	36663-36696	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_008118	Yersinia pestis Nepal516 plasmid pMT, complete sequence	72313-72346	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_AP014953	Klebsiella oxytoca strain JKo3 plasmid pKO_JKo3_2, complete sequence	25440-25473	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP016275	Yersinia pestis strain Cadman plasmid pMT1, complete sequence	938-971	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029891	Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence	79164-79197	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029898	Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence	81724-81757	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_AP018351	Enterobacter hormaechei strain TUM10695 plasmid pMTY10695_IncFIB, complete sequence	34135-34168	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP009904	Yersinia pestis Antiqua plasmid pMT, complete sequence	19270-19303	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029921	Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence	54329-54362	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP009989	Yersinia pestis strain Nicholisk 41 plasmid 1, complete sequence	86056-86089	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP010021	Yersinia pestis str. Pestoides B plasmid pMT, complete sequence	67295-67328	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP031722	Enterobacter hormaechei strain WCHEH020038 plasmid p1_020038, complete sequence	24668-24701	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP053193	Enterobacter hormaechei strain EGYMCRVIM plasmid pMS-37c, complete sequence	25900-25933	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP025883	Escherichia coli strain 503440 plasmid p503440_100, complete sequence	40917-40950	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_KY515226	Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence	12812-12845	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_LT904880	Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3	40464-40497	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_LT904895	Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2	78569-78602	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP009490	Yersinia pestis strain PBM19 plasmid pMT1, complete sequence	69848-69881	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_LT904853	Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2	48271-48304	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP009702	Yersinia pestis strain Harbin35 plasmid unnamed1, complete sequence	84197-84230	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP009784	Yersinia pestis strain El Dorado plasmid pMT, complete sequence	91279-91312	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP033700	Yersinia pestis strain FDAARGOS_601 plasmid unnamed3	15184-15217	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP033700	Yersinia pestis strain FDAARGOS_601 plasmid unnamed3	111653-111686	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_003134	Yersinia pestis CO92 plasmid pMT1, complete sequence	81125-81158	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP006790	Yersinia pestis 2944 plasmid pMT, complete sequence	76675-76708	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP006749	Yersinia pestis 3770 plasmid pMT1, complete sequence	106626-106659	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP006756	Yersinia pestis 1522 plasmid pMT, complete sequence	13124-13157	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	MN178640	Kluyvera cryocrescens strain SCW13 plasmid pSCW13-2, complete sequence	108907-108940	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	113855-113888	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_004838	Yersinia pestis KIM10+ plasmid pMT-1, complete sequence	76909-76942	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP033692	Yersinia pestis strain FDAARGOS_603 plasmid unnamed3, complete sequence	78077-78110	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP033693	Yersinia pestis strain FDAARGOS_603 plasmid unnamed4	33168-33201	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029961	Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence	16297-16330	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029857	Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence	63812-63845	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP021897	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0050 plasmid unitig_2_pilon, complete sequence	12512-12545	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP006779	Yersinia pestis 1412 plasmid pMT, complete sequence	65622-65655	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP027605	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed1, complete sequence	26187-26220	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	CP053410	Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence	106607-106640	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029905	Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence	76843-76876	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029851	Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence	90322-90355	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP019891	Enterobacter hormaechei strain FRM plasmid unnamed2, complete sequence	2338-2371	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP044336	Enterobacter hormaechei strain AKB48 plasmid unnamed1, complete sequence	29810-29843	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029889	Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence	64083-64116	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP019709	Yersinia pestis strain 195/P plasmid pMT1, complete sequence	90129-90162	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029951	Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence	93401-93434	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029867	Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence	79373-79406	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP029901	Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence	79016-79049	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP009841	Yersinia pestis A1122 plasmid pMT, complete sequence	22482-22515	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NZ_CP009843	Yersinia pestis strain Dodson plasmid pMT, complete sequence	21394-21427	10	0.706
NZ_CP042431_2	2.37\|779966\|34\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779966-779999	34	NC_018843	Salmonella phage SSU5, complete genome	42082-42115	10	0.706
NZ_CP042431_2	2.3\|777728\|36\|NZ_CP042431\|CRISPRCasFinder,CRT	777728-777763	36	NC_019765	Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence	21548-21583	11	0.694
NZ_CP042431_2	2.32\|779637\|37\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779637-779673	37	NZ_CP048642	Streptomyces aureoverticillatus strain HN6 plasmid unnamed, complete sequence	33969-34005	11	0.703
NZ_CP042431_2	2.32\|779637\|37\|NZ_CP042431\|CRISPRCasFinder,CRT,PILER-CR	779637-779673	37	NZ_CP040761	Paracoccus sp. 2251 plasmid unnamed5, complete sequence	16778-16814	11	0.703

1. spacer 2.36|779902|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to CP022676 (Bacillus megaterium strain SR7 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.735

cttattgctgcatagaaataaagtagttctttca	CRISPR spacer
gtttgctttacatagaaataaagtagctttttca	Protospacer
 **  . .*.****************.*.*****

2. spacer 2.36|779902|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to CP022676 (Bacillus megaterium strain SR7 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.735

cttattgctgcatagaaataaagtagttctttca	CRISPR spacer
gtttgctttacatagaaataaagtagctttttca	Protospacer
 **  . .*.****************.*.*****

3. spacer 2.36|779902|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to CP022677 (Bacillus megaterium strain SR7 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.735

cttattgctgcatagaaataaagtagttctttca	CRISPR spacer
gtttgctttacatagaaataaagtagctttttca	Protospacer
 **  . .*.****************.*.*****

4. spacer 2.36|779902|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to CP022678 (Bacillus megaterium strain SR7 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.735

cttattgctgcatagaaataaagtagttctttca	CRISPR spacer
gtttgctttacatagaaataaagtagctttttca	Protospacer
 **  . .*.****************.*.*****

5. spacer 2.36|779902|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to CP022679 (Bacillus megaterium strain SR7 plasmid p5, complete sequence) position: , mismatch: 9, identity: 0.735

cttattgctgcatagaaataaagtagttctttca	CRISPR spacer
gtttgctttacatagaaataaagtagctttttca	Protospacer
 **  . .*.****************.*.*****

6. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011655 (Citrobacter freundii strain CAV1741 plasmid pCAV1741-110, complete sequence) position: , mismatch: 9, identity: 0.735

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgaagtaa	Protospacer
 . ********* *********.****  *. **

7. spacer 2.28|779374|37|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014235 (Moraxella osloensis strain CCUG 350 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.73

ctgaccaaagcggatttggctcagttt----ttattaatac	CRISPR spacer
ttgaccaaagcggattttgctccgtttggcgatgtca----	Protospacer
.**************** **** ****     *.*.*

8. spacer 2.28|779374|37|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017382 (Moraxella osloensis strain KMC41 plasmid pMOSL1, complete sequence) position: , mismatch: 10, identity: 0.73

ctgaccaaagcggatttggctcagttt----ttattaatac	CRISPR spacer
ttgaccaaagcggattttgctccgtttggcgatgtca----	Protospacer
.**************** **** ****     *.*.*

9. spacer 2.28|779374|37|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024188 (Moraxella osloensis strain TT16 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.73

ctgaccaaagcggatttggctcagttt----ttattaatac	CRISPR spacer
ttgaccaaagcggattttgctccgtttggcgatgtca----	Protospacer
.**************** **** ****     *.*.*

10. spacer 2.28|779374|37|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024179 (Moraxella osloensis strain YHS plasmid pYHS3, complete sequence) position: , mismatch: 10, identity: 0.73

ctgaccaaagcggatttggctcagttt----ttattaatac	CRISPR spacer
ttgaccaaagcggattttgctccgtttggcgatgtca----	Protospacer
.**************** **** ****     *.*.*

11. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

12. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

13. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034755 (Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

14. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

15. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

16. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029647 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_217186 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

17. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_005815 (Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

18. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014707 (Salmonella enterica subsp. enterica serovar Anatum strain USMARC-1735 plasmid pSAN1-1735, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

19. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009714 (Yersinia pestis Pestoides F plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

20. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009722 (Yersinia pestis strain Shasta plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

21. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045259 (Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

22. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_003385 (Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

23. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_014022 (Yersinia pestis Z176003 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

24. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_017266 (Yersinia pestis biovar Medievalis str. Harbin 35 plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

25. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010386 (Enterobacter hormaechei subsp. xiangfangensis strain 34399 plasmid p34399-121.660kb, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

26. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033694 (Yersinia pestis strain FDAARGOS_602 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

27. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_009378 (Yersinia pestis Pestoides F plasmid MT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

28. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046272 (Enterobacter hormaechei strain E70 plasmid pE70-A, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

29. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_006323 (Yersinia pestis plasmid pG8786, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

30. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045146 (Yersinia pestis strain SCPM-O-B-6899 (231) plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

31. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045164 (Yersinia pestis strain SCPM-O-B-6291 (C-25) plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

32. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045155 (Yersinia pestis strain SCPM-O-B-5935 (I-1996) plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

33. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045159 (Yersinia pestis subsp. pestis bv. Medievalis strain SCPM-O-B-6530 plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

34. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006746 (Yersinia pestis 8787 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

35. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045150 (Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

36. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032183 (Citrobacter freundii strain AR_0116 plasmid unnamed5, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

37. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_017155 (Yersinia pestis D106004 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

38. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_017158 (Yersinia pestis D182038 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

39. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029859 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_285138 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

40. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029847 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_273110 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

41. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029916 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_202113 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

42. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_004835 (Yersinia pestis strain KIM5 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

43. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029893 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_252143 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

44. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006760 (Yersinia pestis 1413 plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

45. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029876 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_227128 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

46. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029884 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_268186 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

47. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029849 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_211126 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

48. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029929 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_216103 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

49. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029865 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228157 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

50. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042573 (Enterobacter hormaechei strain E5 plasmid pE5_002, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

51. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT883154 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12148 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

52. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006752 (Yersinia pestis 3067 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

53. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019819 (Enterobacter hormaechei subsp. hoffmannii strain OIPH-N069 plasmid pN069_2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

54. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_008118 (Yersinia pestis Nepal516 plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

55. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014953 (Klebsiella oxytoca strain JKo3 plasmid pKO_JKo3_2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

56. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016275 (Yersinia pestis strain Cadman plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

57. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029891 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_253155 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

58. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029898 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_213147 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

59. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018351 (Enterobacter hormaechei strain TUM10695 plasmid pMTY10695_IncFIB, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

60. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009904 (Yersinia pestis Antiqua plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

61. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029921 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_282186 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

62. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009989 (Yersinia pestis strain Nicholisk 41 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

63. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010021 (Yersinia pestis str. Pestoides B plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

64. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031722 (Enterobacter hormaechei strain WCHEH020038 plasmid p1_020038, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

65. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053193 (Enterobacter hormaechei strain EGYMCRVIM plasmid pMS-37c, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

66. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

67. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

68. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT904880 (Salmonella enterica subsp. enterica serovar Typhi strain ty3-193 genome assembly, plasmid: 3) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

69. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT904895 (Salmonella enterica subsp. enterica serovar Typhi strain ERL12960 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

70. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009490 (Yersinia pestis strain PBM19 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

71. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT904853 (Salmonella enterica subsp. enterica serovar Typhi strain TY585 genome assembly, plasmid: 2) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

72. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009702 (Yersinia pestis strain Harbin35 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

73. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009784 (Yersinia pestis strain El Dorado plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

74. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033700 (Yersinia pestis strain FDAARGOS_601 plasmid unnamed3) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

75. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033700 (Yersinia pestis strain FDAARGOS_601 plasmid unnamed3) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

76. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_003134 (Yersinia pestis CO92 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

77. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006790 (Yersinia pestis 2944 plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

78. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006749 (Yersinia pestis 3770 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

79. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006756 (Yersinia pestis 1522 plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

80. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to MN178640 (Kluyvera cryocrescens strain SCW13 plasmid pSCW13-2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

81. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

82. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_004838 (Yersinia pestis KIM10+ plasmid pMT-1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

83. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033692 (Yersinia pestis strain FDAARGOS_603 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

84. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033693 (Yersinia pestis strain FDAARGOS_603 plasmid unnamed4) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

85. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029961 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_251131 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

86. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029857 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_286126 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

87. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021897 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0050 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

88. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006779 (Yersinia pestis 1412 plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

89. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027605 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0093 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

90. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

91. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029905 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_231186 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

92. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029851 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_203125 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

93. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019891 (Enterobacter hormaechei strain FRM plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

94. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044336 (Enterobacter hormaechei strain AKB48 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

95. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029889 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_294172 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

96. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019709 (Yersinia pestis strain 195/P plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

97. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029951 (Salmonella enterica subsp. enterica serovar Typhi strain 311189_205186 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

98. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029867 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_228140 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

99. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029901 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_232188 plasmid pHCM2, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

100. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009841 (Yersinia pestis A1122 plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

101. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009843 (Yersinia pestis strain Dodson plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

102. spacer 2.37|779966|34|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NC_018843 (Salmonella phage SSU5, complete genome) position: , mismatch: 10, identity: 0.706

cacttaaacgacctaagtaatgaaaattcaaaaa	CRISPR spacer
agattaaacgacataagtaatggaaatgacgtaa	Protospacer
 . ********* *********.****   . **

103. spacer 2.3|777728|36|NZ_CP042431|CRISPRCasFinder,CRT matches to NC_019765 (Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence) position: , mismatch: 11, identity: 0.694

acagtcggcattgttaataatcgcttccttgatgat	CRISPR spacer
acagtcgacatttttaataatcgctttcacagcttg	Protospacer
*******.**** *************.* ....

104. spacer 2.32|779637|37|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048642 (Streptomyces aureoverticillatus strain HN6 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

tcgcgccgccgagctggatcaccaggc------caatctcttt	CRISPR spacer
ccgcgcggccgagctggagcaccaggcagccgagaag------	Protospacer
.***** *********** ********       **

105. spacer 2.32|779637|37|NZ_CP042431|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040761 (Paracoccus sp. 2251 plasmid unnamed5, complete sequence) position: , mismatch: 11, identity: 0.703

tcgcgccgccgagctggatcaccaggccaatctcttt	CRISPR spacer
ccgcgccgtcgcgctggatcaccaggcgatagcccgc	Protospacer
.*******.** *************** *   .*. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2403324 : 2411874

uncultured_virus(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_130541719.1\|2403324_2404353_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	9.2e-07	26.8
WP_130541718.1\|2404418_2405120_-	response regulator transcription factor	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	27.6
WP_130541717.1\|2405249_2405621_+	co-chaperone GroES	A0A221S2Y9	uncultured_virus	6.2e-06	31.0
WP_130541716.1\|2405693_2406104_-	hypothetical protein	NA	NA	NA	NA
WP_130541715.1\|2406278_2407841_+	DUF853 family protein	A0A248XCZ8	Klebsiella_phage	1.0e-70	38.6
WP_130541714.1\|2407837_2409745_-	RecQ family ATP-dependent DNA helicase	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	3.1e-69	44.4
WP_130541713.1\|2409750_2411874_-	cadmium-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.6e-90	32.6

DBSCAN-SWA_2

7648882 : 7660893

Hokovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_130543680.1\|7648882_7651318_-	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	8.6e-221	44.3
WP_130543679.1\|7652148_7653123_+	ribonucleoside-diphosphate reductase	A0A0G3G497	Raccoon_poxvirus	1.9e-126	70.3
WP_130543678.1\|7653175_7655563_+	ribonucleoside-diphosphate reductase subunit alpha	G4YAV1	Emiliania_huxleyi_virus	6.7e-303	67.3
WP_158644182.1\|7656115_7656292_-	hypothetical protein	NA	NA	NA	NA
WP_130543677.1\|7656362_7657298_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.7e-15	27.7
WP_130543676.1\|7657316_7658372_-	response regulator	W8CYM9	Bacillus_phage	9.1e-18	37.2
WP_130543675.1\|7658496_7660893_+	HAD-IC family P-type ATPase	A0A218MNH6	uncultured_virus	1.6e-41	24.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP042431

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection