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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017523 Mannheimia haemolytica strain 1582 chromosome, complete genome 3 crisprs cas3,DEDDh,WYL,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,c2c9_V-U4,PD-DExK,RT 9 16 8 1

Results visualization

1. NZ_CP017523
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017523_1 890563-890637 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017523_2 1127083-1127157 Orphan NA
1 spacers
DinG

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017523_3 1656919-1658084 TypeI NA
17 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,c2c9_V-U4

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP017523_3 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR 1657749-1657785 37 NZ_CP017523.1 1524712-1524748 0 1.0
NZ_CP017523_3 3.15|1657883|36|NZ_CP017523|CRT,PILER-CR 1657883-1657918 36 NZ_CP017523.1 1275662-1275697 0 1.0
NZ_CP017523_3 3.22|1657284|34|NZ_CP017523|CRISPRCasFinder 1657284-1657317 34 NZ_CP017523.1 1583035-1583068 0 1.0
NZ_CP017523_3 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder 1657617-1657650 34 NZ_CP017523.1 1525064-1525097 0 1.0
NZ_CP017523_3 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder 1657683-1657717 35 NZ_CP017523.1 1525318-1525352 0 1.0
NZ_CP017523_3 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder 1657750-1657785 36 NZ_CP017523.1 1524713-1524748 0 1.0
NZ_CP017523_3 3.30|1657818|34|NZ_CP017523|CRISPRCasFinder 1657818-1657851 34 NZ_CP017523.1 1598260-1598293 0 1.0
NZ_CP017523_3 3.31|1657884|35|NZ_CP017523|CRISPRCasFinder 1657884-1657918 35 NZ_CP017523.1 1275662-1275696 0 1.0
NZ_CP017523_3 3.32|1657951|34|NZ_CP017523|CRISPRCasFinder 1657951-1657984 34 NZ_CP017523.1 2627437-2627470 0 1.0

1. spacer 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR matches to position: 1524712-1524748, mismatch: 0, identity: 1.0

ggtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
ggtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
*************************************

2. spacer 3.15|1657883|36|NZ_CP017523|CRT,PILER-CR matches to position: 1275662-1275697, mismatch: 0, identity: 1.0

gttgtttggatctcttaatcttgattcttgaaaaag	CRISPR spacer
gttgtttggatctcttaatcttgattcttgaaaaag	Protospacer
************************************

3. spacer 3.22|1657284|34|NZ_CP017523|CRISPRCasFinder matches to position: 1583035-1583068, mismatch: 0, identity: 1.0

ctctagcattaaaatccaatcggtaaacggtaaa	CRISPR spacer
ctctagcattaaaatccaatcggtaaacggtaaa	Protospacer
**********************************

4. spacer 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder matches to position: 1525064-1525097, mismatch: 0, identity: 1.0

cgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
cgcaagcattgcaccacggtaacaacggctgctg	Protospacer
**********************************

5. spacer 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder matches to position: 1525318-1525352, mismatch: 0, identity: 1.0

gcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
gcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
***********************************

6. spacer 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder matches to position: 1524713-1524748, mismatch: 0, identity: 1.0

gtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
gtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
************************************

7. spacer 3.30|1657818|34|NZ_CP017523|CRISPRCasFinder matches to position: 1598260-1598293, mismatch: 0, identity: 1.0

gcactagggcgagtgcagacgggcaagtgtcgga	CRISPR spacer
gcactagggcgagtgcagacgggcaagtgtcgga	Protospacer
**********************************

8. spacer 3.31|1657884|35|NZ_CP017523|CRISPRCasFinder matches to position: 1275662-1275696, mismatch: 0, identity: 1.0

ttgtttggatctcttaatcttgattcttgaaaaag	CRISPR spacer
ttgtttggatctcttaatcttgattcttgaaaaag	Protospacer
***********************************

9. spacer 3.32|1657951|34|NZ_CP017523|CRISPRCasFinder matches to position: 2627437-2627470, mismatch: 0, identity: 1.0

ccttatcttaactgactccggaggtattcaagaa	CRISPR spacer
ccttatcttaactgactccggaggtattcaagaa	Protospacer
**********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP017523_3 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR 1657749-1657785 37 NC_008201 Mannheimia phage phiMHaA1, complete genome 18740-18776 0 1.0
NZ_CP017523_3 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR 1657749-1657785 37 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18815-18851 0 1.0
NZ_CP017523_3 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR 1657749-1657785 37 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18780-18816 0 1.0
NZ_CP017523_3 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR 1657749-1657785 37 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18976-19012 0 1.0
NZ_CP017523_3 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR 1657749-1657785 37 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 19141-19177 0 1.0
NZ_CP017523_3 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR 1657749-1657785 37 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18740-18776 0 1.0
NZ_CP017523_3 3.15|1657883|36|NZ_CP017523|CRT,PILER-CR 1657883-1657918 36 NC_028853 Mannheimia phage vB_MhS_535AP2, complete genome 11457-11492 0 1.0
NZ_CP017523_3 3.15|1657883|36|NZ_CP017523|CRT,PILER-CR 1657883-1657918 36 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 11457-11492 0 1.0
NZ_CP017523_3 3.15|1657883|36|NZ_CP017523|CRT,PILER-CR 1657883-1657918 36 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 11439-11474 0 1.0
NZ_CP017523_3 3.22|1657284|34|NZ_CP017523|CRISPRCasFinder 1657284-1657317 34 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 19193-19226 0 1.0
NZ_CP017523_3 3.22|1657284|34|NZ_CP017523|CRISPRCasFinder 1657284-1657317 34 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 19018-19051 0 1.0
NZ_CP017523_3 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder 1657617-1657650 34 NC_008201 Mannheimia phage phiMHaA1, complete genome 18391-18424 0 1.0
NZ_CP017523_3 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder 1657617-1657650 34 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18466-18499 0 1.0
NZ_CP017523_3 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder 1657617-1657650 34 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18431-18464 0 1.0
NZ_CP017523_3 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder 1657617-1657650 34 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18627-18660 0 1.0
NZ_CP017523_3 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder 1657617-1657650 34 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18792-18825 0 1.0
NZ_CP017523_3 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder 1657617-1657650 34 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18391-18424 0 1.0
NZ_CP017523_3 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder 1657683-1657717 35 NC_008201 Mannheimia phage phiMHaA1, complete genome 18136-18170 0 1.0
NZ_CP017523_3 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder 1657683-1657717 35 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18136-18170 0 1.0
NZ_CP017523_3 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder 1657683-1657717 35 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18136-18170 0 1.0
NZ_CP017523_3 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder 1657683-1657717 35 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18336-18370 0 1.0
NZ_CP017523_3 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder 1657683-1657717 35 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18565-18599 0 1.0
NZ_CP017523_3 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder 1657683-1657717 35 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18136-18170 0 1.0
NZ_CP017523_3 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder 1657750-1657785 36 NC_008201 Mannheimia phage phiMHaA1, complete genome 18740-18775 0 1.0
NZ_CP017523_3 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder 1657750-1657785 36 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18815-18850 0 1.0
NZ_CP017523_3 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder 1657750-1657785 36 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18780-18815 0 1.0
NZ_CP017523_3 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder 1657750-1657785 36 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18976-19011 0 1.0
NZ_CP017523_3 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder 1657750-1657785 36 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 19141-19176 0 1.0
NZ_CP017523_3 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder 1657750-1657785 36 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18740-18775 0 1.0
NZ_CP017523_3 3.30|1657818|34|NZ_CP017523|CRISPRCasFinder 1657818-1657851 34 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 3967-4000 0 1.0
NZ_CP017523_3 3.31|1657884|35|NZ_CP017523|CRISPRCasFinder 1657884-1657918 35 NC_028853 Mannheimia phage vB_MhS_535AP2, complete genome 11457-11491 0 1.0
NZ_CP017523_3 3.31|1657884|35|NZ_CP017523|CRISPRCasFinder 1657884-1657918 35 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 11457-11491 0 1.0
NZ_CP017523_3 3.31|1657884|35|NZ_CP017523|CRISPRCasFinder 1657884-1657918 35 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 11439-11473 0 1.0
NZ_CP017523_3 3.6|1657283|35|NZ_CP017523|CRT,PILER-CR 1657283-1657317 35 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 19192-19226 1 0.971
NZ_CP017523_3 3.6|1657283|35|NZ_CP017523|CRT,PILER-CR 1657283-1657317 35 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 19017-19051 1 0.971
NZ_CP017523_3 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR 1657616-1657650 35 NC_008201 Mannheimia phage phiMHaA1, complete genome 18391-18425 1 0.971
NZ_CP017523_3 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR 1657616-1657650 35 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18466-18500 1 0.971
NZ_CP017523_3 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR 1657616-1657650 35 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18431-18465 1 0.971
NZ_CP017523_3 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR 1657616-1657650 35 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18627-18661 1 0.971
NZ_CP017523_3 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR 1657616-1657650 35 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18792-18826 1 0.971
NZ_CP017523_3 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR 1657616-1657650 35 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18391-18425 1 0.971
NZ_CP017523_3 3.12|1657682|36|NZ_CP017523|CRT,PILER-CR 1657682-1657717 36 NC_008201 Mannheimia phage phiMHaA1, complete genome 18136-18171 1 0.972
NZ_CP017523_3 3.12|1657682|36|NZ_CP017523|CRT,PILER-CR 1657682-1657717 36 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18136-18171 1 0.972
NZ_CP017523_3 3.12|1657682|36|NZ_CP017523|CRT,PILER-CR 1657682-1657717 36 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18136-18171 1 0.972
NZ_CP017523_3 3.12|1657682|36|NZ_CP017523|CRT,PILER-CR 1657682-1657717 36 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18336-18371 1 0.972
NZ_CP017523_3 3.12|1657682|36|NZ_CP017523|CRT,PILER-CR 1657682-1657717 36 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18565-18600 1 0.972
NZ_CP017523_3 3.12|1657682|36|NZ_CP017523|CRT,PILER-CR 1657682-1657717 36 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18136-18171 1 0.972
NZ_CP017523_3 3.14|1657817|35|NZ_CP017523|CRT,PILER-CR 1657817-1657851 35 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 3966-4000 1 0.971
NZ_CP017523_1 1.1|890586|29|NZ_CP017523|CRISPRCasFinder 890586-890614 29 MH791397 UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome 22354-22382 5 0.828
NZ_CP017523_2 2.1|1127106|29|NZ_CP017523|CRISPRCasFinder 1127106-1127134 29 MH791397 UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome 22354-22382 5 0.828
NZ_CP017523_3 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder 1657617-1657650 34 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 19383-19416 6 0.824
NZ_CP017523_3 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder 1657617-1657650 34 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 19392-19425 6 0.824
NZ_CP017523_3 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR 1657616-1657650 35 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 19383-19417 7 0.8
NZ_CP017523_3 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR 1657616-1657650 35 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 19392-19426 7 0.8
NZ_CP017523_3 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder 1657683-1657717 35 HM144385 Brochothrix phage NF5, complete genome 32998-33032 10 0.714
NZ_CP017523_3 3.23|1657350|35|NZ_CP017523|CRISPRCasFinder 1657350-1657384 35 NC_014534 Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence 368774-368808 11 0.686
NZ_CP017523_3 3.25|1657483|34|NZ_CP017523|CRISPRCasFinder 1657483-1657516 34 NC_014533 Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence 710003-710036 11 0.676

1. spacer 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
ggtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
*************************************

2. spacer 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

ggtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
ggtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
*************************************

3. spacer 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
ggtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
*************************************

4. spacer 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

ggtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
ggtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
*************************************

5. spacer 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

ggtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
ggtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
*************************************

6. spacer 3.13|1657749|37|NZ_CP017523|CRT,PILER-CR matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

ggtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
ggtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
*************************************

7. spacer 3.15|1657883|36|NZ_CP017523|CRT,PILER-CR matches to NC_028853 (Mannheimia phage vB_MhS_535AP2, complete genome) position: , mismatch: 0, identity: 1.0

gttgtttggatctcttaatcttgattcttgaaaaag	CRISPR spacer
gttgtttggatctcttaatcttgattcttgaaaaag	Protospacer
************************************

8. spacer 3.15|1657883|36|NZ_CP017523|CRT,PILER-CR matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

gttgtttggatctcttaatcttgattcttgaaaaag	CRISPR spacer
gttgtttggatctcttaatcttgattcttgaaaaag	Protospacer
************************************

9. spacer 3.15|1657883|36|NZ_CP017523|CRT,PILER-CR matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 0, identity: 1.0

gttgtttggatctcttaatcttgattcttgaaaaag	CRISPR spacer
gttgtttggatctcttaatcttgattcttgaaaaag	Protospacer
************************************

10. spacer 3.22|1657284|34|NZ_CP017523|CRISPRCasFinder matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

ctctagcattaaaatccaatcggtaaacggtaaa	CRISPR spacer
ctctagcattaaaatccaatcggtaaacggtaaa	Protospacer
**********************************

11. spacer 3.22|1657284|34|NZ_CP017523|CRISPRCasFinder matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 0, identity: 1.0

ctctagcattaaaatccaatcggtaaacggtaaa	CRISPR spacer
ctctagcattaaaatccaatcggtaaacggtaaa	Protospacer
**********************************

12. spacer 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

cgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
cgcaagcattgcaccacggtaacaacggctgctg	Protospacer
**********************************

13. spacer 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

cgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
cgcaagcattgcaccacggtaacaacggctgctg	Protospacer
**********************************

14. spacer 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

cgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
cgcaagcattgcaccacggtaacaacggctgctg	Protospacer
**********************************

15. spacer 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

cgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
cgcaagcattgcaccacggtaacaacggctgctg	Protospacer
**********************************

16. spacer 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

cgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
cgcaagcattgcaccacggtaacaacggctgctg	Protospacer
**********************************

17. spacer 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

cgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
cgcaagcattgcaccacggtaacaacggctgctg	Protospacer
**********************************

18. spacer 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

gcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
gcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
***********************************

19. spacer 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

gcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
gcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
***********************************

20. spacer 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

gcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
gcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
***********************************

21. spacer 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

gcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
gcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
***********************************

22. spacer 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

gcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
gcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
***********************************

23. spacer 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

gcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
gcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
***********************************

24. spacer 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

gtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
gtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
************************************

25. spacer 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

gtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
gtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
************************************

26. spacer 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

gtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
gtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
************************************

27. spacer 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

gtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
gtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
************************************

28. spacer 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

gtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
gtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
************************************

29. spacer 3.29|1657750|36|NZ_CP017523|CRISPRCasFinder matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

gtgcaaactactccgataaccgaagtagcagcggtg	CRISPR spacer
gtgcaaactactccgataaccgaagtagcagcggtg	Protospacer
************************************

30. spacer 3.30|1657818|34|NZ_CP017523|CRISPRCasFinder matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

gcactagggcgagtgcagacgggcaagtgtcgga	CRISPR spacer
gcactagggcgagtgcagacgggcaagtgtcgga	Protospacer
**********************************

31. spacer 3.31|1657884|35|NZ_CP017523|CRISPRCasFinder matches to NC_028853 (Mannheimia phage vB_MhS_535AP2, complete genome) position: , mismatch: 0, identity: 1.0

ttgtttggatctcttaatcttgattcttgaaaaag	CRISPR spacer
ttgtttggatctcttaatcttgattcttgaaaaag	Protospacer
***********************************

32. spacer 3.31|1657884|35|NZ_CP017523|CRISPRCasFinder matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

ttgtttggatctcttaatcttgattcttgaaaaag	CRISPR spacer
ttgtttggatctcttaatcttgattcttgaaaaag	Protospacer
***********************************

33. spacer 3.31|1657884|35|NZ_CP017523|CRISPRCasFinder matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 0, identity: 1.0

ttgtttggatctcttaatcttgattcttgaaaaag	CRISPR spacer
ttgtttggatctcttaatcttgattcttgaaaaag	Protospacer
***********************************

34. spacer 3.6|1657283|35|NZ_CP017523|CRT,PILER-CR matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 1, identity: 0.971

cctctagcattaaaatccaatcggtaaacggtaaa	CRISPR spacer
actctagcattaaaatccaatcggtaaacggtaaa	Protospacer
 **********************************

35. spacer 3.6|1657283|35|NZ_CP017523|CRT,PILER-CR matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 1, identity: 0.971

cctctagcattaaaatccaatcggtaaacggtaaa	CRISPR spacer
actctagcattaaaatccaatcggtaaacggtaaa	Protospacer
 **********************************

36. spacer 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 1, identity: 0.971

gcgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
ccgcaagcattgcaccacggtaacaacggctgctg	Protospacer
 **********************************

37. spacer 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 1, identity: 0.971

gcgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
ccgcaagcattgcaccacggtaacaacggctgctg	Protospacer
 **********************************

38. spacer 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 1, identity: 0.971

gcgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
ccgcaagcattgcaccacggtaacaacggctgctg	Protospacer
 **********************************

39. spacer 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 1, identity: 0.971

gcgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
ccgcaagcattgcaccacggtaacaacggctgctg	Protospacer
 **********************************

40. spacer 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 1, identity: 0.971

gcgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
ccgcaagcattgcaccacggtaacaacggctgctg	Protospacer
 **********************************

41. spacer 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 1, identity: 0.971

gcgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
ccgcaagcattgcaccacggtaacaacggctgctg	Protospacer
 **********************************

42. spacer 3.12|1657682|36|NZ_CP017523|CRT,PILER-CR matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 1, identity: 0.972

ggcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
agcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
.***********************************

43. spacer 3.12|1657682|36|NZ_CP017523|CRT,PILER-CR matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 1, identity: 0.972

ggcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
agcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
.***********************************

44. spacer 3.12|1657682|36|NZ_CP017523|CRT,PILER-CR matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 1, identity: 0.972

ggcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
agcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
.***********************************

45. spacer 3.12|1657682|36|NZ_CP017523|CRT,PILER-CR matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 1, identity: 0.972

ggcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
agcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
.***********************************

46. spacer 3.12|1657682|36|NZ_CP017523|CRT,PILER-CR matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 1, identity: 0.972

ggcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
agcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
.***********************************

47. spacer 3.12|1657682|36|NZ_CP017523|CRT,PILER-CR matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 1, identity: 0.972

ggcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
agcgtttatcagcatctgctcgtgttactgtgccac	Protospacer
.***********************************

48. spacer 3.14|1657817|35|NZ_CP017523|CRT,PILER-CR matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 1, identity: 0.971

ggcactagggcgagtgcagacgggcaagtgtcgga	CRISPR spacer
agcactagggcgagtgcagacgggcaagtgtcgga	Protospacer
.**********************************

49. spacer 1.1|890586|29|NZ_CP017523|CRISPRCasFinder matches to MH791397 (UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome) position: , mismatch: 5, identity: 0.828

agacctgatactaatctagggtataaaga	CRISPR spacer
aaacctcataataatctagggtataaggc	Protospacer
*.**** *** ***************.* 

50. spacer 2.1|1127106|29|NZ_CP017523|CRISPRCasFinder matches to MH791397 (UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome) position: , mismatch: 5, identity: 0.828

tctttataccctagattagtatcaggtct	CRISPR spacer
gccttataccctagattattatgaggttt	Protospacer
 *.*************** *** ****.*

51. spacer 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 6, identity: 0.824

cgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
cgcaagcactgcaccacggtagcaacggctagaa	Protospacer
********.************.********.  .

52. spacer 3.27|1657617|34|NZ_CP017523|CRISPRCasFinder matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 6, identity: 0.824

cgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
cgcaagcactgcaccacggtagcaacggctagaa	Protospacer
********.************.********.  .

53. spacer 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 7, identity: 0.8

gcgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
ccgcaagcactgcaccacggtagcaacggctagaa	Protospacer
 ********.************.********.  .

54. spacer 3.11|1657616|35|NZ_CP017523|CRT,PILER-CR matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 7, identity: 0.8

gcgcaagcattgcaccacggtaacaacggctgctg	CRISPR spacer
ccgcaagcactgcaccacggtagcaacggctagaa	Protospacer
 ********.************.********.  .

55. spacer 3.28|1657683|35|NZ_CP017523|CRISPRCasFinder matches to HM144385 (Brochothrix phage NF5, complete genome) position: , mismatch: 10, identity: 0.714

gcgtttatcagcatctgctcgtgttactgtgccac	CRISPR spacer
ataattatcaacatctggtcgtgttactggtcgat	Protospacer
... ******.****** ***********  * *.

56. spacer 3.23|1657350|35|NZ_CP017523|CRISPRCasFinder matches to NC_014534 (Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence) position: , mismatch: 11, identity: 0.686

tttaattaataaaatagctttagctttagatttaa	CRISPR spacer
ccaatctaataaaataattttagctttagatcggg	Protospacer
.. * .**********..*************. ..

57. spacer 3.25|1657483|34|NZ_CP017523|CRISPRCasFinder matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 11, identity: 0.676

tatcatttatcgcccgaaaaatccaaaaatcgca	CRISPR spacer
acaagcttatcgcccaaaaaatccaacaataaaa	Protospacer
    ..*********.********** *** . *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 43941 : 51268 10 Mannheimia_phage(80.0%) tail,transposase NA
DBSCAN-SWA_2 533837 : 591633 61 Burkholderia_phage(19.05%) plate,tail,tRNA,transposase NA
DBSCAN-SWA_3 1035463 : 1042248 9 Mycobacterium_phage(16.67%) NA NA
DBSCAN-SWA_4 1223103 : 1322654 117 Mannheimia_phage(85.0%) integrase,tRNA,terminase,tail,protease,capsid,transposase attL 1222889:1222907|attR 1245034:1245052
DBSCAN-SWA_5 1467134 : 1643674 199 Mannheimia_phage(89.93%) transposase,integrase,tRNA,head,terminase,tail,portal,capsid,holin,plate attL 1606390:1606449|attR 1643673:1644874
DBSCAN-SWA_6 1800864 : 1811182 14 Mannheimia_phage(50.0%) NA NA
DBSCAN-SWA_7 1814415 : 1821359 9 Mannheimia_phage(60.0%) tail NA
DBSCAN-SWA_8 2254624 : 2262779 12 Synechococcus_phage(16.67%) integrase,terminase attL 2257830:2257889|attR 2263195:2263268
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP017523.1|WP_006250250.1|1633987_1634218_-|hypothetical-protein 1633987_1634218_- 76 aa aa NA NA NA 1467134-1643674 yes