Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP017527 Mannheimia haemolytica strain 1563 chromosome, complete genome 3 crisprs cas3,DEDDh,WYL,DinG,c2c9_V-U4,cas5,cas8c,cas7,cas4,cas1,cas2,PD-DExK,RT 7 18 11 1

Results visualization

1. NZ_CP017527
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017527_1 915040-915114 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017527_2 1332783-1332897 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP017527_3 1793502-1794404 TypeI NA
13 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,c2c9_V-U4

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP017527_3 3.1|1793534|36|NZ_CP017527|CRISPRCasFinder 1793534-1793569 36 NZ_CP017527.1 2677892-2677927 0 1.0
NZ_CP017527_3 3.2|1793602|34|NZ_CP017527|CRISPRCasFinder 1793602-1793635 34 NZ_CP017527.1 2671984-2672017 0 1.0
NZ_CP017527_3 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder 1793668-1793703 36 NZ_CP017527.1 1335936-1335971 0 1.0
NZ_CP017527_3 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder 1793736-1793770 35 NZ_CP017527.1 1335284-1335318 0 1.0
NZ_CP017527_3 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder 1793803-1793836 34 NZ_CP017527.1 1335587-1335620 0 1.0
NZ_CP017527_3 3.11|1794202|37|NZ_CP017527|CRISPRCasFinder 1794202-1794238 37 NZ_CP017527.1 1284449-1284485 0 1.0
NZ_CP017527_3 3.16|1793668|37|NZ_CP017527|PILER-CR 1793668-1793704 37 NZ_CP017527.1 1335936-1335972 0 1.0

1. spacer 3.1|1793534|36|NZ_CP017527|CRISPRCasFinder matches to position: 2677892-2677927, mismatch: 0, identity: 1.0

cctataacgagcaatggcattttgatctacggtaaa	CRISPR spacer
cctataacgagcaatggcattttgatctacggtaaa	Protospacer
************************************

2. spacer 3.2|1793602|34|NZ_CP017527|CRISPRCasFinder matches to position: 2671984-2672017, mismatch: 0, identity: 1.0

ttcttgaatacctccggagtcagttaagataagg	CRISPR spacer
ttcttgaatacctccggagtcagttaagataagg	Protospacer
**********************************

3. spacer 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder matches to position: 1335936-1335971, mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

4. spacer 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder matches to position: 1335284-1335318, mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

5. spacer 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder matches to position: 1335587-1335620, mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

6. spacer 3.11|1794202|37|NZ_CP017527|CRISPRCasFinder matches to position: 1284449-1284485, mismatch: 0, identity: 1.0

aggggcgtgtaccgcaatcaattttaattataaccaa	CRISPR spacer
aggggcgtgtaccgcaatcaattttaattataaccaa	Protospacer
*************************************

7. spacer 3.16|1793668|37|NZ_CP017527|PILER-CR matches to position: 1335936-1335972, mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP017527_2 2.1|1332811|59|NZ_CP017527|CRISPRCasFinder 1332811-1332869 59 NC_008201 Mannheimia phage phiMHaA1, complete genome 15663-15721 0 1.0
NZ_CP017527_2 2.1|1332811|59|NZ_CP017527|CRISPRCasFinder 1332811-1332869 59 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 15663-15721 0 1.0
NZ_CP017527_2 2.1|1332811|59|NZ_CP017527|CRISPRCasFinder 1332811-1332869 59 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 15663-15721 0 1.0
NZ_CP017527_2 2.1|1332811|59|NZ_CP017527|CRISPRCasFinder 1332811-1332869 59 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 15863-15921 0 1.0
NZ_CP017527_2 2.1|1332811|59|NZ_CP017527|CRISPRCasFinder 1332811-1332869 59 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 16092-16150 0 1.0
NZ_CP017527_2 2.1|1332811|59|NZ_CP017527|CRISPRCasFinder 1332811-1332869 59 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 15663-15721 0 1.0
NZ_CP017527_3 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder 1793668-1793703 36 NC_008201 Mannheimia phage phiMHaA1, complete genome 18740-18775 0 1.0
NZ_CP017527_3 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder 1793668-1793703 36 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18815-18850 0 1.0
NZ_CP017527_3 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder 1793668-1793703 36 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18780-18815 0 1.0
NZ_CP017527_3 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder 1793668-1793703 36 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18976-19011 0 1.0
NZ_CP017527_3 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder 1793668-1793703 36 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 19141-19176 0 1.0
NZ_CP017527_3 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder 1793668-1793703 36 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18740-18775 0 1.0
NZ_CP017527_3 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder 1793736-1793770 35 NC_008201 Mannheimia phage phiMHaA1, complete genome 18136-18170 0 1.0
NZ_CP017527_3 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder 1793736-1793770 35 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18136-18170 0 1.0
NZ_CP017527_3 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder 1793736-1793770 35 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18136-18170 0 1.0
NZ_CP017527_3 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder 1793736-1793770 35 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18336-18370 0 1.0
NZ_CP017527_3 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder 1793736-1793770 35 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18565-18599 0 1.0
NZ_CP017527_3 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder 1793736-1793770 35 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18136-18170 0 1.0
NZ_CP017527_3 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder 1793803-1793836 34 NC_008201 Mannheimia phage phiMHaA1, complete genome 18391-18424 0 1.0
NZ_CP017527_3 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder 1793803-1793836 34 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18466-18499 0 1.0
NZ_CP017527_3 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder 1793803-1793836 34 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18431-18464 0 1.0
NZ_CP017527_3 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder 1793803-1793836 34 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18627-18660 0 1.0
NZ_CP017527_3 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder 1793803-1793836 34 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18792-18825 0 1.0
NZ_CP017527_3 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder 1793803-1793836 34 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18391-18424 0 1.0
NZ_CP017527_3 3.8|1794002|34|NZ_CP017527|CRISPRCasFinder 1794002-1794035 34 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 19193-19226 0 1.0
NZ_CP017527_3 3.8|1794002|34|NZ_CP017527|CRISPRCasFinder 1794002-1794035 34 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 19018-19051 0 1.0
NZ_CP017527_3 3.11|1794202|37|NZ_CP017527|CRISPRCasFinder 1794202-1794238 37 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 27263-27299 0 1.0
NZ_CP017527_3 3.11|1794202|37|NZ_CP017527|CRISPRCasFinder 1794202-1794238 37 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 27371-27407 0 1.0
NZ_CP017527_3 3.16|1793668|37|NZ_CP017527|PILER-CR 1793668-1793704 37 NC_008201 Mannheimia phage phiMHaA1, complete genome 18740-18776 0 1.0
NZ_CP017527_3 3.16|1793668|37|NZ_CP017527|PILER-CR 1793668-1793704 37 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18815-18851 0 1.0
NZ_CP017527_3 3.16|1793668|37|NZ_CP017527|PILER-CR 1793668-1793704 37 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18780-18816 0 1.0
NZ_CP017527_3 3.16|1793668|37|NZ_CP017527|PILER-CR 1793668-1793704 37 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18976-19012 0 1.0
NZ_CP017527_3 3.16|1793668|37|NZ_CP017527|PILER-CR 1793668-1793704 37 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 19141-19177 0 1.0
NZ_CP017527_3 3.16|1793668|37|NZ_CP017527|PILER-CR 1793668-1793704 37 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18740-18776 0 1.0
NZ_CP017527_3 3.17|1793736|36|NZ_CP017527|PILER-CR 1793736-1793771 36 NC_008201 Mannheimia phage phiMHaA1, complete genome 18136-18171 1 0.972
NZ_CP017527_3 3.17|1793736|36|NZ_CP017527|PILER-CR 1793736-1793771 36 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18136-18171 1 0.972
NZ_CP017527_3 3.17|1793736|36|NZ_CP017527|PILER-CR 1793736-1793771 36 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18136-18171 1 0.972
NZ_CP017527_3 3.17|1793736|36|NZ_CP017527|PILER-CR 1793736-1793771 36 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18336-18371 1 0.972
NZ_CP017527_3 3.17|1793736|36|NZ_CP017527|PILER-CR 1793736-1793771 36 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18565-18600 1 0.972
NZ_CP017527_3 3.17|1793736|36|NZ_CP017527|PILER-CR 1793736-1793771 36 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18136-18171 1 0.972
NZ_CP017527_3 3.18|1793803|35|NZ_CP017527|PILER-CR 1793803-1793837 35 NC_008201 Mannheimia phage phiMHaA1, complete genome 18391-18425 1 0.971
NZ_CP017527_3 3.18|1793803|35|NZ_CP017527|PILER-CR 1793803-1793837 35 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18466-18500 1 0.971
NZ_CP017527_3 3.18|1793803|35|NZ_CP017527|PILER-CR 1793803-1793837 35 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18431-18465 1 0.971
NZ_CP017527_3 3.18|1793803|35|NZ_CP017527|PILER-CR 1793803-1793837 35 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18627-18661 1 0.971
NZ_CP017527_3 3.18|1793803|35|NZ_CP017527|PILER-CR 1793803-1793837 35 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18792-18826 1 0.971
NZ_CP017527_3 3.18|1793803|35|NZ_CP017527|PILER-CR 1793803-1793837 35 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18391-18425 1 0.971
NZ_CP017527_3 3.21|1794002|35|NZ_CP017527|PILER-CR 1794002-1794036 35 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 19192-19226 1 0.971
NZ_CP017527_3 3.21|1794002|35|NZ_CP017527|PILER-CR 1794002-1794036 35 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 19017-19051 1 0.971
NZ_CP017527_3 3.24|1794202|38|NZ_CP017527|PILER-CR 1794202-1794239 38 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 27262-27299 1 0.974
NZ_CP017527_3 3.24|1794202|38|NZ_CP017527|PILER-CR 1794202-1794239 38 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 27370-27407 1 0.974
NZ_CP017527_1 1.1|915063|29|NZ_CP017527|CRISPRCasFinder 915063-915091 29 MH791397 UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome 22354-22382 5 0.828
NZ_CP017527_3 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder 1793803-1793836 34 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 19383-19416 6 0.824
NZ_CP017527_3 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder 1793803-1793836 34 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 19392-19425 6 0.824
NZ_CP017527_3 3.29|1793657|48|NZ_CP017527|CRT 1793657-1793704 48 NC_008201 Mannheimia phage phiMHaA1, complete genome 18729-18776 6 0.875
NZ_CP017527_3 3.29|1793657|48|NZ_CP017527|CRT 1793657-1793704 48 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18804-18851 6 0.875
NZ_CP017527_3 3.29|1793657|48|NZ_CP017527|CRT 1793657-1793704 48 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18769-18816 6 0.875
NZ_CP017527_3 3.29|1793657|48|NZ_CP017527|CRT 1793657-1793704 48 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18965-19012 6 0.875
NZ_CP017527_3 3.29|1793657|48|NZ_CP017527|CRT 1793657-1793704 48 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 19130-19177 6 0.875
NZ_CP017527_3 3.29|1793657|48|NZ_CP017527|CRT 1793657-1793704 48 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18729-18776 6 0.875
NZ_CP017527_3 3.34|1793991|46|NZ_CP017527|CRT 1793991-1794036 46 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 19192-19237 6 0.87
NZ_CP017527_3 3.34|1793991|46|NZ_CP017527|CRT 1793991-1794036 46 NC_028743 Mannheimia phage vB_MhS_587AP2, complete genome 19017-19062 6 0.87
NZ_CP017527_3 3.18|1793803|35|NZ_CP017527|PILER-CR 1793803-1793837 35 NC_047750 Mannheimia phage vB_MhM_1127AP1, complete genome 19383-19417 7 0.8
NZ_CP017527_3 3.18|1793803|35|NZ_CP017527|PILER-CR 1793803-1793837 35 NC_028898 Mannheimia phage vB_MhM_587AP1, complete genome 19392-19426 7 0.8
NZ_CP017527_3 3.37|1794191|49|NZ_CP017527|CRT 1794191-1794239 49 KP137439 Mannheimia phage vB_MhS_3927AP1, complete genome 27262-27310 7 0.857
NZ_CP017527_3 3.37|1794191|49|NZ_CP017527|CRT 1794191-1794239 49 NC_028956 Mannheimia phage vB_MhS_1152AP2, complete genome 27370-27418 7 0.857
NZ_CP017527_3 3.30|1793725|47|NZ_CP017527|CRT 1793725-1793771 47 NC_008201 Mannheimia phage phiMHaA1, complete genome 18125-18171 8 0.83
NZ_CP017527_3 3.30|1793725|47|NZ_CP017527|CRT 1793725-1793771 47 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18125-18171 8 0.83
NZ_CP017527_3 3.30|1793725|47|NZ_CP017527|CRT 1793725-1793771 47 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18125-18171 8 0.83
NZ_CP017527_3 3.30|1793725|47|NZ_CP017527|CRT 1793725-1793771 47 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18325-18371 8 0.83
NZ_CP017527_3 3.30|1793725|47|NZ_CP017527|CRT 1793725-1793771 47 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18554-18600 8 0.83
NZ_CP017527_3 3.30|1793725|47|NZ_CP017527|CRT 1793725-1793771 47 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18125-18171 8 0.83
NZ_CP017527_3 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder 1793736-1793770 35 HM144385 Brochothrix phage NF5, complete genome 32998-33032 10 0.714
NZ_CP017527_3 3.31|1793792|46|NZ_CP017527|CRT 1793792-1793837 46 NC_008201 Mannheimia phage phiMHaA1, complete genome 18380-18425 10 0.783
NZ_CP017527_3 3.31|1793792|46|NZ_CP017527|CRT 1793792-1793837 46 DQ426905 Bacteriophage phi-MhaA1-BAA410, complete genome 18455-18500 10 0.783
NZ_CP017527_3 3.31|1793792|46|NZ_CP017527|CRT 1793792-1793837 46 KP137432 Mannheimia phage vB_MhM_535AP1, complete genome 18420-18465 10 0.783
NZ_CP017527_3 3.31|1793792|46|NZ_CP017527|CRT 1793792-1793837 46 JN255163 Mannheimia phage vB_MhM_1152AP, complete genome 18616-18661 10 0.783
NZ_CP017527_3 3.31|1793792|46|NZ_CP017527|CRT 1793792-1793837 46 KP137438 Mannheimia phage vB_MhM_2256AP1, complete genome 18781-18826 10 0.783
NZ_CP017527_3 3.31|1793792|46|NZ_CP017527|CRT 1793792-1793837 46 DQ426904 Bacteriophage phi-MhaA1-PHL101, complete genome 18380-18425 10 0.783
NZ_CP017527_3 3.7|1793935|35|NZ_CP017527|CRISPRCasFinder 1793935-1793969 35 NC_014534 Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence 368774-368808 11 0.686

1. spacer 2.1|1332811|59|NZ_CP017527|CRISPRCasFinder matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

acctaaaaagctccctgttattgtcattaaaagcaaaatggatttatttagtgcaacaa	CRISPR spacer
acctaaaaagctccctgttattgtcattaaaagcaaaatggatttatttagtgcaacaa	Protospacer
***********************************************************

2. spacer 2.1|1332811|59|NZ_CP017527|CRISPRCasFinder matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

acctaaaaagctccctgttattgtcattaaaagcaaaatggatttatttagtgcaacaa	CRISPR spacer
acctaaaaagctccctgttattgtcattaaaagcaaaatggatttatttagtgcaacaa	Protospacer
***********************************************************

3. spacer 2.1|1332811|59|NZ_CP017527|CRISPRCasFinder matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

acctaaaaagctccctgttattgtcattaaaagcaaaatggatttatttagtgcaacaa	CRISPR spacer
acctaaaaagctccctgttattgtcattaaaagcaaaatggatttatttagtgcaacaa	Protospacer
***********************************************************

4. spacer 2.1|1332811|59|NZ_CP017527|CRISPRCasFinder matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

acctaaaaagctccctgttattgtcattaaaagcaaaatggatttatttagtgcaacaa	CRISPR spacer
acctaaaaagctccctgttattgtcattaaaagcaaaatggatttatttagtgcaacaa	Protospacer
***********************************************************

5. spacer 2.1|1332811|59|NZ_CP017527|CRISPRCasFinder matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

acctaaaaagctccctgttattgtcattaaaagcaaaatggatttatttagtgcaacaa	CRISPR spacer
acctaaaaagctccctgttattgtcattaaaagcaaaatggatttatttagtgcaacaa	Protospacer
***********************************************************

6. spacer 2.1|1332811|59|NZ_CP017527|CRISPRCasFinder matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

acctaaaaagctccctgttattgtcattaaaagcaaaatggatttatttagtgcaacaa	CRISPR spacer
acctaaaaagctccctgttattgtcattaaaagcaaaatggatttatttagtgcaacaa	Protospacer
***********************************************************

7. spacer 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

8. spacer 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

9. spacer 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

10. spacer 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

11. spacer 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

12. spacer 3.3|1793668|36|NZ_CP017527|CRISPRCasFinder matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcac	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcac	Protospacer
************************************

13. spacer 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

14. spacer 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

15. spacer 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

16. spacer 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

17. spacer 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

18. spacer 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgc	Protospacer
***********************************

19. spacer 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

20. spacer 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

21. spacer 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

22. spacer 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

23. spacer 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

24. spacer 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcg	Protospacer
**********************************

25. spacer 3.8|1794002|34|NZ_CP017527|CRISPRCasFinder matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

tttaccgtttaccgattggattttaatgctagag	CRISPR spacer
tttaccgtttaccgattggattttaatgctagag	Protospacer
**********************************

26. spacer 3.8|1794002|34|NZ_CP017527|CRISPRCasFinder matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 0, identity: 1.0

tttaccgtttaccgattggattttaatgctagag	CRISPR spacer
tttaccgtttaccgattggattttaatgctagag	Protospacer
**********************************

27. spacer 3.11|1794202|37|NZ_CP017527|CRISPRCasFinder matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 0, identity: 1.0

aggggcgtgtaccgcaatcaattttaattataaccaa	CRISPR spacer
aggggcgtgtaccgcaatcaattttaattataaccaa	Protospacer
*************************************

28. spacer 3.11|1794202|37|NZ_CP017527|CRISPRCasFinder matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 0, identity: 1.0

aggggcgtgtaccgcaatcaattttaattataaccaa	CRISPR spacer
aggggcgtgtaccgcaatcaattttaattataaccaa	Protospacer
*************************************

29. spacer 3.16|1793668|37|NZ_CP017527|PILER-CR matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

30. spacer 3.16|1793668|37|NZ_CP017527|PILER-CR matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

31. spacer 3.16|1793668|37|NZ_CP017527|PILER-CR matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

32. spacer 3.16|1793668|37|NZ_CP017527|PILER-CR matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

33. spacer 3.16|1793668|37|NZ_CP017527|PILER-CR matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

34. spacer 3.16|1793668|37|NZ_CP017527|PILER-CR matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 0, identity: 1.0

caccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
caccgctgctacttcggttatcggagtagtttgcacc	Protospacer
*************************************

35. spacer 3.17|1793736|36|NZ_CP017527|PILER-CR matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 1, identity: 0.972

gtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgct	Protospacer
***********************************.

36. spacer 3.17|1793736|36|NZ_CP017527|PILER-CR matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 1, identity: 0.972

gtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgct	Protospacer
***********************************.

37. spacer 3.17|1793736|36|NZ_CP017527|PILER-CR matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 1, identity: 0.972

gtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgct	Protospacer
***********************************.

38. spacer 3.17|1793736|36|NZ_CP017527|PILER-CR matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 1, identity: 0.972

gtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgct	Protospacer
***********************************.

39. spacer 3.17|1793736|36|NZ_CP017527|PILER-CR matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 1, identity: 0.972

gtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgct	Protospacer
***********************************.

40. spacer 3.17|1793736|36|NZ_CP017527|PILER-CR matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 1, identity: 0.972

gtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
gtggcacagtaacacgagcagatgctgataaacgct	Protospacer
***********************************.

41. spacer 3.18|1793803|35|NZ_CP017527|PILER-CR matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
********************************** 

42. spacer 3.18|1793803|35|NZ_CP017527|PILER-CR matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 1, identity: 0.971

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
********************************** 

43. spacer 3.18|1793803|35|NZ_CP017527|PILER-CR matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
********************************** 

44. spacer 3.18|1793803|35|NZ_CP017527|PILER-CR matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 1, identity: 0.971

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
********************************** 

45. spacer 3.18|1793803|35|NZ_CP017527|PILER-CR matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 1, identity: 0.971

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
********************************** 

46. spacer 3.18|1793803|35|NZ_CP017527|PILER-CR matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 1, identity: 0.971

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
cagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
********************************** 

47. spacer 3.21|1794002|35|NZ_CP017527|PILER-CR matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 1, identity: 0.971

tttaccgtttaccgattggattttaatgctagagg	CRISPR spacer
tttaccgtttaccgattggattttaatgctagagt	Protospacer
********************************** 

48. spacer 3.21|1794002|35|NZ_CP017527|PILER-CR matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 1, identity: 0.971

tttaccgtttaccgattggattttaatgctagagg	CRISPR spacer
tttaccgtttaccgattggattttaatgctagagt	Protospacer
********************************** 

49. spacer 3.24|1794202|38|NZ_CP017527|PILER-CR matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 1, identity: 0.974

aggggcgtgtaccgcaatcaattttaattataaccaag	CRISPR spacer
aggggcgtgtaccgcaatcaattttaattataaccaat	Protospacer
************************************* 

50. spacer 3.24|1794202|38|NZ_CP017527|PILER-CR matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 1, identity: 0.974

aggggcgtgtaccgcaatcaattttaattataaccaag	CRISPR spacer
aggggcgtgtaccgcaatcaattttaattataaccaat	Protospacer
************************************* 

51. spacer 1.1|915063|29|NZ_CP017527|CRISPRCasFinder matches to MH791397 (UNVERIFIED: Enterococcus phage EfsSzw-1, complete genome) position: , mismatch: 5, identity: 0.828

agacctgatactaatctagggtataaaga	CRISPR spacer
aaacctcataataatctagggtataaggc	Protospacer
*.**** *** ***************.* 

52. spacer 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 6, identity: 0.824

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
ttctagccgttgctaccgtggtgcagtgcttgcg	Protospacer
.  .********.************.********

53. spacer 3.5|1793803|34|NZ_CP017527|CRISPRCasFinder matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 6, identity: 0.824

cagcagccgttgttaccgtggtgcaatgcttgcg	CRISPR spacer
ttctagccgttgctaccgtggtgcagtgcttgcg	Protospacer
.  .********.************.********

54. spacer 3.29|1793657|48|NZ_CP017527|CRT matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 6, identity: 0.875

----cgaattgaaaccaccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
gtcaccattt----ccaccgctgctacttcggttatcggagtagtttgcacc	Protospacer
    * * **    **************************************

55. spacer 3.29|1793657|48|NZ_CP017527|CRT matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 6, identity: 0.875

----cgaattgaaaccaccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
gtcaccattt----ccaccgctgctacttcggttatcggagtagtttgcacc	Protospacer
    * * **    **************************************

56. spacer 3.29|1793657|48|NZ_CP017527|CRT matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 6, identity: 0.875

----cgaattgaaaccaccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
gtcaccattt----ccaccgctgctacttcggttatcggagtagtttgcacc	Protospacer
    * * **    **************************************

57. spacer 3.29|1793657|48|NZ_CP017527|CRT matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 6, identity: 0.875

----cgaattgaaaccaccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
gtcaccattt----ccaccgctgctacttcggttatcggagtagtttgcacc	Protospacer
    * * **    **************************************

58. spacer 3.29|1793657|48|NZ_CP017527|CRT matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 6, identity: 0.875

----cgaattgaaaccaccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
gtcaccattt----ccaccgctgctacttcggttatcggagtagtttgcacc	Protospacer
    * * **    **************************************

59. spacer 3.29|1793657|48|NZ_CP017527|CRT matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 6, identity: 0.875

----cgaattgaaaccaccgctgctacttcggttatcggagtagtttgcacc	CRISPR spacer
gtcaccattt----ccaccgctgctacttcggttatcggagtagtttgcacc	Protospacer
    * * **    **************************************

60. spacer 3.34|1793991|46|NZ_CP017527|CRT matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 6, identity: 0.87

----tgaattgaaactttaccgtttaccgattggattttaatgctagagg	CRISPR spacer
agcgtgattt----ctttaccgtttaccgattggattttaatgctagagt	Protospacer
    *** **    *********************************** 

61. spacer 3.34|1793991|46|NZ_CP017527|CRT matches to NC_028743 (Mannheimia phage vB_MhS_587AP2, complete genome) position: , mismatch: 6, identity: 0.87

----tgaattgaaactttaccgtttaccgattggattttaatgctagagg	CRISPR spacer
agcgtgattt----ctttaccgtttaccgattggattttaatgctagagt	Protospacer
    *** **    *********************************** 

62. spacer 3.18|1793803|35|NZ_CP017527|PILER-CR matches to NC_047750 (Mannheimia phage vB_MhM_1127AP1, complete genome) position: , mismatch: 7, identity: 0.8

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
ttctagccgttgctaccgtggtgcagtgcttgcgg	Protospacer
.  .********.************.******** 

63. spacer 3.18|1793803|35|NZ_CP017527|PILER-CR matches to NC_028898 (Mannheimia phage vB_MhM_587AP1, complete genome) position: , mismatch: 7, identity: 0.8

cagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
ttctagccgttgctaccgtggtgcagtgcttgcgg	Protospacer
.  .********.************.******** 

64. spacer 3.37|1794191|49|NZ_CP017527|CRT matches to KP137439 (Mannheimia phage vB_MhS_3927AP1, complete genome) position: , mismatch: 7, identity: 0.857

tgaattgaaacaggggcgtgtaccgcaatcaattttaattataaccaag	CRISPR spacer
ttaatattttcaggggcgtgtaccgcaatcaattttaattataaccaat	Protospacer
* ***     ************************************** 

65. spacer 3.37|1794191|49|NZ_CP017527|CRT matches to NC_028956 (Mannheimia phage vB_MhS_1152AP2, complete genome) position: , mismatch: 7, identity: 0.857

tgaattgaaacaggggcgtgtaccgcaatcaattttaattataaccaag	CRISPR spacer
ttaatattttcaggggcgtgtaccgcaatcaattttaattataaccaat	Protospacer
* ***     ************************************** 

66. spacer 3.30|1793725|47|NZ_CP017527|CRT matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 8, identity: 0.83

cgaattgaaacgtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
ctacggcattcgtggcacagtaacacgagcagatgctgataaacgct	Protospacer
* *    *  ************************************.

67. spacer 3.30|1793725|47|NZ_CP017527|CRT matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 8, identity: 0.83

cgaattgaaacgtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
ctacggcattcgtggcacagtaacacgagcagatgctgataaacgct	Protospacer
* *    *  ************************************.

68. spacer 3.30|1793725|47|NZ_CP017527|CRT matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 8, identity: 0.83

cgaattgaaacgtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
ctacggcattcgtggcacagtaacacgagcagatgctgataaacgct	Protospacer
* *    *  ************************************.

69. spacer 3.30|1793725|47|NZ_CP017527|CRT matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 8, identity: 0.83

cgaattgaaacgtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
ctacggcattcgtggcacagtaacacgagcagatgctgataaacgct	Protospacer
* *    *  ************************************.

70. spacer 3.30|1793725|47|NZ_CP017527|CRT matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 8, identity: 0.83

cgaattgaaacgtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
ctacggcattcgtggcacagtaacacgagcagatgctgataaacgct	Protospacer
* *    *  ************************************.

71. spacer 3.30|1793725|47|NZ_CP017527|CRT matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 8, identity: 0.83

cgaattgaaacgtggcacagtaacacgagcagatgctgataaacgcc	CRISPR spacer
ctacggcattcgtggcacagtaacacgagcagatgctgataaacgct	Protospacer
* *    *  ************************************.

72. spacer 3.4|1793736|35|NZ_CP017527|CRISPRCasFinder matches to HM144385 (Brochothrix phage NF5, complete genome) position: , mismatch: 10, identity: 0.714

gtggcacagtaacacgagcagatgctgataaacgc	CRISPR spacer
atcgaccagtaacacgaccagatgttgataattat	Protospacer
.* *  *********** ******.****** ...

73. spacer 3.31|1793792|46|NZ_CP017527|CRT matches to NC_008201 (Mannheimia phage phiMHaA1, complete genome) position: , mismatch: 10, identity: 0.783

cgaattgaaaccagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
gctaccttttccagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
   *..    *********************************** 

74. spacer 3.31|1793792|46|NZ_CP017527|CRT matches to DQ426905 (Bacteriophage phi-MhaA1-BAA410, complete genome) position: , mismatch: 10, identity: 0.783

cgaattgaaaccagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
gctaccttttccagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
   *..    *********************************** 

75. spacer 3.31|1793792|46|NZ_CP017527|CRT matches to KP137432 (Mannheimia phage vB_MhM_535AP1, complete genome) position: , mismatch: 10, identity: 0.783

cgaattgaaaccagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
gctaccttttccagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
   *..    *********************************** 

76. spacer 3.31|1793792|46|NZ_CP017527|CRT matches to JN255163 (Mannheimia phage vB_MhM_1152AP, complete genome) position: , mismatch: 10, identity: 0.783

cgaattgaaaccagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
gctaccttttccagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
   *..    *********************************** 

77. spacer 3.31|1793792|46|NZ_CP017527|CRT matches to KP137438 (Mannheimia phage vB_MhM_2256AP1, complete genome) position: , mismatch: 10, identity: 0.783

cgaattgaaaccagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
gctaccttttccagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
   *..    *********************************** 

78. spacer 3.31|1793792|46|NZ_CP017527|CRT matches to DQ426904 (Bacteriophage phi-MhaA1-PHL101, complete genome) position: , mismatch: 10, identity: 0.783

cgaattgaaaccagcagccgttgttaccgtggtgcaatgcttgcgc	CRISPR spacer
gctaccttttccagcagccgttgttaccgtggtgcaatgcttgcgg	Protospacer
   *..    *********************************** 

79. spacer 3.7|1793935|35|NZ_CP017527|CRISPRCasFinder matches to NC_014534 (Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence) position: , mismatch: 11, identity: 0.686

ttaaatctaaagctaaagctattttattaattaaa	CRISPR spacer
cccgatctaaagctaaaattattttattagattgg	Protospacer
.. .*************..**********. * ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 44670 : 51997 10 Mannheimia_phage(80.0%) transposase,tail NA
DBSCAN-SWA_2 575271 : 659230 93 Mannheimia_phage(17.02%) transposase,tail,protease,plate,tRNA,head NA
DBSCAN-SWA_3 915326 : 971291 59 Mannheimia_phage(26.67%) transposase,integrase attL 938163:938178|attR 972192:972207
DBSCAN-SWA_4 1071137 : 1077922 9 Mycobacterium_phage(16.67%) NA NA
DBSCAN-SWA_5 1269155 : 1360714 107 Mannheimia_phage(88.46%) portal,terminase,transposase,tail,integrase,capsid,plate,tRNA,head,holin attL 1338095:1338111|attR 1363619:1363635
DBSCAN-SWA_6 1526123 : 1623278 116 Mannheimia_phage(89.16%) terminase,transposase,tail,protease,integrase,tRNA attL 1615325:1615343|attR 1632094:1632112
DBSCAN-SWA_7 1628851 : 1637261 9 Mannheimia_phage(60.0%) tail NA
DBSCAN-SWA_8 1640494 : 1650811 14 Mannheimia_phage(50.0%) NA NA
DBSCAN-SWA_9 1728216 : 1843952 112 Mannheimia_phage(45.9%) portal,terminase,transposase,tail,integrase,tRNA,holin attL 1730275:1730333|attR 1853871:1853929
DBSCAN-SWA_10 1853929 : 1861181 12 Mannheimia_phage(75.0%) transposase,integrase attL 1846855:1846868|attR 1856134:1856147
DBSCAN-SWA_11 2296112 : 2304267 12 Synechococcus_phage(16.67%) terminase,integrase attL 2299318:2299377|attR 2304683:2304756
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP017527.1|WP_006250250.1|1280515_1280746_-|hypothetical-protein 1280515_1280746_- 76 aa aa NA NA NA 1269155-1360714 yes