CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP034366	Pantoea sp. CCBC3-3-1 plasmid unnamed3, complete sequence	0 crisprs	NA	0	0	3	0
NZ_CP034363	Pantoea sp. CCBC3-3-1 chromosome, complete genome	3 crisprs	DEDDh,DinG,csa3,cas3,RT	1	2	7	2
NZ_CP034364	Pantoea sp. CCBC3-3-1 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP034365	Pantoea sp. CCBC3-3-1 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP034363_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034363_1

566310-566599

Orphan

Consensus_repeat	Method
GCAGCAAAAAAGCAGATGACTGTCCACGACACTCTCTATGAAAAGAAAGCGGCTT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP034363_1

>merge|NZ_CP034363|1|566310-566599|PILER-CR
GCAGCAAAAAAGCAGATGACTGTCCACGACACTCTCTATGAAAAGAAAGCGGCTTACCGGTCAGCTTCACACTCATTCAACAAAAACCCCGCTTCGGCGGGGTTTTTGTTATGCGCGGCAGCAAAAAAGCAGATGACTGTCCACGACACTCTCTATGAAAAGAAAGCGGCTTGCCGGTCAGCTTCACACTCATTCAACAAAAAACCCCGCTCCGGCGGGGTTTTTGTTATGCGCAGCAGCAAAAAAGCAGATGACTGTCCACGACACTCTCTATGAAAAGAAAGCGGCTT

>NZ_CP034363|1|1|566310-566599|PILER-CR
GCAGCAAAAAAGCAGATGACTGTCCACGACACTCTCTATGAAAAGAAAGCGGCTT	ACCGGTCAGCTTCACACTCATTCAACAAAAACCCCGCTTCGGCGGGGTTTTTGTTATGCGCG
GCAGCAAAAAAGCAGATGACTGTCCACGACACTCTCTATGAAAAGAAAGCGGCTT	GCCGGTCAGCTTCACACTCATTCAACAAAAAACCCCGCTCCGGCGGGGTTTTTGTTATGCGCA
GCAGCAAAAAAGCAGATGACTGTCCACGACACTCTCTATGAAAAGAAAGCGGCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034363.1\|WP_147194643.1\|571017_571410_-\|DoxX-family-membrane-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP034363.1\|WP_168199584.1\|570523_570886_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034363.1\|WP_147194598.1\|555572_556217_+\|DUF4310-family-protein	unknown	unknown	gnl\|CDD\|132618
NZ_CP034363.1\|WP_147194628.1\|566714_567065_-\|toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|226679
NZ_CP034363.1\|WP_147194604.1\|557353_558475_+\|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase	unknown	unknown	gnl\|CDD\|273623
NZ_CP034363.1\|WP_147194601.1\|556236_557370_+\|amidohydrolase/deacetylase-family-metallohydrolase	unknown	unknown	gnl\|CDD\|236423
NZ_CP034363.1\|WP_147194614.1\|561301_561874_-\|divisome-associated-lipoprotein-YraP	unknown	unknown	gnl\|CDD\|182907
NZ_CP034363.1\|WP_147194619.1\|562507_562900_-\|YraN-family-protein	unknown	unknown	gnl\|CDD\|237119
NZ_CP034363.1\|WP_147194611.1\|559311_561222_+\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|226234
NZ_CP034363.1\|WP_147194655.1\|572668_573040_-\|DUF1090-family-protein	unknown	unknown	gnl\|CDD\|368932
NZ_CP034363.1\|WP_147194616.1\|561884_562475_-\|DnaA-initiator-associating-protein-DiaA	unknown	unknown	gnl\|CDD\|182811
NZ_CP034363.1\|WP_147194625.1\|564995_565853_+\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|184956
NZ_CP034363.1\|WP_147194646.1\|571645_571927_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372871
NZ_CP034363.1\|WP_147194607.1\|558471_559212_+\|oxo-acid-lyase	unknown	unknown	gnl\|CDD\|188342
NZ_CP034363.1\|WP_147194622.1\|562857_564933_-\|penicillin-binding-protein-activator	unknown	unknown	gnl\|CDD\|225649
NZ_CP034363.1\|WP_147194635.1\|567416_568121_-\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP034363.1\|WP_147194649.1\|571926_572319_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227681
NZ_CP034363.1\|WP_147194641.1\|569179_570166_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223512
NZ_CP034363.1\|WP_147194638.1\|568246_569152_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176122
NZ_CP034363.1\|WP_147194652.1\|572320_572626_-\|DUF883-family-protein	unknown	unknown	gnl\|CDD\|226941

Protein	Function_ID	Function_description	E-value
NZ_CP034363.1\|WP_147194643.1\|571017_571410_-\|DoxX-family-membrane-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	3.65163e-26
NZ_CP034363.1\|WP_147194598.1\|555572_556217_+\|DUF4310-family-protein	gnl\|CDD\|132618	TIGR03579, EF_0833, conserved hypothetical protein EF_0833/AHA_3914. Members of this family of relatively rare proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.	6.7652e-100
NZ_CP034363.1\|WP_147194628.1\|566714_567065_-\|toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|226679	COG4226, HicB, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	3.33669e-38
NZ_CP034363.1\|WP_147194604.1\|557353_558475_+\|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase	gnl\|CDD\|273623	TIGR01437, selA_rel, uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP034363.1\|WP_147194601.1\|556236_557370_+\|amidohydrolase/deacetylase-family-metallohydrolase	gnl\|CDD\|236423	PRK09237, PRK09237, amidohydrolase/deacetylase family metallohydrolase.	0
NZ_CP034363.1\|WP_147194614.1\|561301_561874_-\|divisome-associated-lipoprotein-YraP	gnl\|CDD\|182907	PRK11023, PRK11023, divisome-associated lipoprotein YraP.	3.12557e-108
NZ_CP034363.1\|WP_147194619.1\|562507_562900_-\|YraN-family-protein	gnl\|CDD\|237119	PRK12497, PRK12497, YraN family protein.	8.28612e-53
NZ_CP034363.1\|WP_147194611.1\|559311_561222_+\|PRD-domain-containing-protein	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	6.40456e-64
NZ_CP034363.1\|WP_147194655.1\|572668_573040_-\|DUF1090-family-protein	gnl\|CDD\|368932	pfam06476, DUF1090, Protein of unknown function (DUF1090). This family consists of several bacterial proteins of unknown function and is known as YqjC in E. coli.	1.08988e-26
NZ_CP034363.1\|WP_147194616.1\|561884_562475_-\|DnaA-initiator-associating-protein-DiaA	gnl\|CDD\|182811	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional.	1.41737e-140
NZ_CP034363.1\|WP_147194625.1\|564995_565853_+\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl\|CDD\|184956	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional.	0
NZ_CP034363.1\|WP_147194646.1\|571645_571927_-\|hypothetical-protein	gnl\|CDD\|372871	pfam13997, YqjK, YqjK-like protein. The YqjK-like protein family includes the E. coli YqjK protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. There is a single completely conserved residue R that may be functionally important.	1.82269e-23
NZ_CP034363.1\|WP_147194607.1\|558471_559212_+\|oxo-acid-lyase	gnl\|CDD\|188342	TIGR03581, EF_0839, conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown. [Hypothetical proteins, Conserved].	6.38745e-142
NZ_CP034363.1\|WP_147194622.1\|562857_564933_-\|penicillin-binding-protein-activator	gnl\|CDD\|225649	COG3107, LppC, Putative lipoprotein [General function prediction only].	1.21463e-117
NZ_CP034363.1\|WP_147194635.1\|567416_568121_-\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	9.09795e-58
NZ_CP034363.1\|WP_147194649.1\|571926_572319_-\|hypothetical-protein	gnl\|CDD\|227681	COG5393, COG5393, Predicted membrane protein [Function unknown].	3.453e-50
NZ_CP034363.1\|WP_147194641.1\|569179_570166_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP034363.1\|WP_147194638.1\|568246_569152_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176122	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold. HupR, a member of the LysR family, activates hupA transcription under low-iron conditions in the presence of hemin. The expression of many iron-uptake genes, such as hupA, is regulated at the transcriptional level by iron and an iron-binding repressor protein called Fur (ferric uptake regulation). Under iron-abundant conditions with heme, the active Fur repressor protein represses transcription of the iron-uptake gene hupA, and prevents transcriptional activation via HupR. Under low-iron conditions with heme, the Fur repressor is inactive and transcription of the hupA is allowed. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.37012e-50
NZ_CP034363.1\|WP_147194652.1\|572320_572626_-\|DUF883-family-protein	gnl\|CDD\|226941	COG4575, ElaB, Uncharacterized conserved protein [Function unknown].	8.03406e-38

>NZ_CP034363.1|WP_147194625.1|564995_565853_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MKQREEISASTLYIVPTPIGNLGDITQRALTVLSSVDLIAAEDTRHTGLLLQHFAINARLFALHDHNEQQKAETLLAKLRDGQSIALVSDAGTPLINDPGYHLVRLCRDAGINVVPLPGACAAITALSAAGLPSDRFCYEGFLPAKSKGRCDTLRALEQESRTLIFYESTHRLLESLQDMVAVWGEARYVVLAREITKTWESIYGAPVGELLAWVQEDENRRKGEMVLIVEGYHAQEDALPPEALRTLALLQKELPLKKAAQLTAEIHDVKKNALYKYALEQQEG
>NZ_CP034363.1|WP_147194622.1|562857_564933_-|penicillin-binding-protein-activator
MLPSKVIHNKAGRNLAVLLAALIFAGCSGQGPQTPQADVQAAATGTSDSYLQQMQQSSDDNKVDWQLLAIRALLNEGKIPQANDQFASLPQQLSDTQRQEALLLQAQLKIAQQDLNGAGQLLQKVDTASLSKDQQARYLQLQINSSQGRPSLALLRAYIAQEPLLTTPADKQKNIDATWQALVQMTPDQINSLVINADENTLQGWLDLLNVYKANSSDPDMLKAGISDWQTRYPYNPAAKMLPTALTQVQNFQQASTAKIALLLPLSGQAQIFANAIKKGFDDARNGTLTQNGTVQPAAAAQPAIGSAAAPVQAPTQAGGENSAAPADANAAVSPSASPDAAATPASTPEPAAPAAQNANVAQTAAPSSSTQVQVYDTGSQPVDQVLAQAQKDGATLVVGPLIKNNVEQLASVQTPLNILALNEPESVQNHPNLCYFALSPEDEARDAAHHMWDQGKRSPLLMVPRSALGDRVNKAFATEWQKLGGSTVLQQQFGSTGELKQGINSGAGLRLTGTPVTLQQPPQQPQDANVTGQPPVQPAPVSDSGNVDSVYIVATQDEMALIKPMISMRVSSRSMVQIYASSRSYQAGSGPDFRLEMEGVQFSDAPLLSGNNPALLQQAAKNFNNDYSLVRLYAMGVDAWTLANHFSEVRQLPGFQIQGETGNLSATTDCVINRKLTWSQYRQGQIVPAS
>NZ_CP034363.1|WP_147194619.1|562507_562900_-|YraN-family-protein
MEPVSSGTNRSGILSRQQTGAGYEQQARRLLEQAGLTFVAANVRFRVGEIDLIMRDKTTWVFVEVRYRRNALFGGAAASVTRSKQLKLLKAAAFWLNGRRTSFESADCRFDVIAITGTQIDWLPNAFTAE
>NZ_CP034363.1|WP_147194616.1|561884_562475_-|DnaA-initiator-associating-protein-DiaA
MLERIKVCFTESIQTQIAAAEALPDAISRAAMTIVQSLLNGNKILSCGNGTSSANAQHFAASMINRFETERPSLPAIALSADNVLLTAIGNDRLHDEVYAKQVRALGHAGDILLAISTRGNSRDIVKAVEAAVTRDMTIIALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDA
>NZ_CP034363.1|WP_147194614.1|561301_561874_-|divisome-associated-lipoprotein-YraP
MKVFSAMAVVITALMLQGCVAAVIGSAAVATKSATDPRTVGTQVDDGTLELRVSNALSKDQQIKNDAHIVPTAYQGKVLLTGQAPTADIASRAKQIAVGVDGATEVYNEIRTGSKASFGTASSDTWITTKVRSNLLSSDQVKSSNVKVTTENGEVFLLGLVTNEEAKAAADIASRVSGVQHVTTAFTILK
>NZ_CP034363.1|WP_147194611.1|559311_561222_+|PRD-domain-containing-protein
MRFPNLRLAQLFELLQNETLPQDELARHFAVTTRTVRTDITALNELLAAHGARFVLNRGAGYQLKVDDRDRYNQLQCQTASPLRIPRTSAARVNYLLTRFLTSAFALKLEDLADEWFVSRATLQSDMAEVREKLSRYHLVIETKPRYGMKLFGSEVAIRTCLTDLLYHIAREDTDDPLLNLEALNSGILDTLQPLLHQCFSRFSIKMSDDSEFYLRLYCAVAVRRISEGYPLSDFSAEDVDRDVRAAARHIVNLLRPMTGKAISSSEEAYLRVNIAARRTEDIAASVISPDDGESLVNYILSYVNTHYNFDLQNDPQLRADLLTHIKTMITRVRYQIAIPNPLLGNIKQHYPLAYDVTLAAVASWSKYTPYNISENEIGFLVLHIGVGLERHYNVGYQRHPKVLLVCDTGNSTVRMIQAMLMRKYPQIIVSNIVSQREYEQQVAIDEDFVISTVRLSEKGKPVVVMAPFPTEYQLEQLGKLVLVDRTRPYMLEKFFDAGHFRIIDRPMTQTELFSVLCDQLEREGVVDKQFYASVEEREAIVSTLLGEGIALPHSLGLMAKKTVVYTVLAPHGIRWGDETACVIFLLAISKTEYEEAMAIYDLFVTFMRERAMTRLRGCEDFAGFKAVAMDCLSRL
>NZ_CP034363.1|WP_147194607.1|558471_559212_+|oxo-acid-lyase
MKLTPNFYRDRVCLNVLAGSKENARDIWQAAEGHVLVGVLSKNYDSVTRAVDDMRDYAALIDNALSVGLGAGDPNQSAMVSSIAAAVQPQHVNQVFTGVATSRALLGQDQTVVNGLISPTGTPGQVKISTGPRSSQAPDGVVPIETAIALLKDMGGSSVKYFPMGGLQAIDEFKAVAQACAQQDFWLEPTGGIDLQNYEAILTIALEAGVSKIIPHIYSSIIDKETGCTRADDVSKLLTMTKKLTG
>NZ_CP034363.1|WP_147194604.1|557353_558475_+|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase
MSSIYEKYGLKQVINASGRMTILGVSTPAADVVETVNYGLNHYFEMKDLVNKTGAYIAGLLGSEDAVVVSCASAGIAQSVAAVIVKDDDWLLENLHAAPLTVPHDIVVPKGHNVNFGAPVGTMVAMGGGRLVEAGYANECSAEQLSAAVTPQTAAVMYIKSHHCVQKSHLSVKQAAEVARRHGVPLIVDAAAEEDLQCYYREGADLVIYSGAKAIEGPTSGLVMGRKEPVAWVKRQSMGIGRAMKVGKEGILGLTQAIENYLRLEKASGAQMVEKMTPFIDSLNAIHGISARVVWDAAGRDIARTEIHFDEATLGRTTTEVVQALKTGDIAIYFRGYKANEGLVEVDVRSVSPSQLEIIATQINRLLSQGNPA
>NZ_CP034363.1|WP_147194601.1|556236_557370_+|amidohydrolase/deacetylase-family-metallohydrolase
MFDLIIRRARLADGSLTTIAIHDGKIAALGEPQGQATQEIDLAGRYWLSAGWIDSHVHCYPKSPIYHDEADRIGVETGVTTVVDAGSTGADDVDDFYQLTRTANTQVHALLNIARTGIVTQNELADMQQIDKASVRAAVQRLPGFIIGIKARMSSSVVGANGIQPLIGAKEIQQENGNLPLMVHIGNNPPDLDEIAELLGQGDIITHCYNGKPNRILTPAGELRASVAKAIKRGVRLDVGHGSASFSFEVARVAIAQGILPHTISSDIYCRNRLNGPVYTLAHVMSKFFSVGMTLPQIIACVTRHAAEGLRLHNKGKLAVGFDADLTLFDLSEAACVFTDSEGKSEAGEKQLVPLAAMVKGKWFITDEGKKHHVFDL
>NZ_CP034363.1|WP_147194598.1|555572_556217_+|DUF4310-family-protein
MEASKSGFWYADWSFPIFVGLLSAGVFAGTHMYYVYGLGAFNEVAFVSMLRAGMETGVYGAVAAFGASFLFARIIEGSLVGILDIGGAIQTGIGLGVPALLLGAGIVFPVANFAASLATGLLLGLAIGYVIILARKFTINNSDSTYGADVMMGAGNSSGRFLGPLIILSAMAASIPIGLGSLIGALLFYLWNKPITGGAILGAMLLGAIFPVAL
>NZ_CP034363.1|WP_147194628.1|566714_567065_-|toxin-antitoxin-system-HicB-family-antitoxin
MSKTNFFEIAGQPAVVSFVPELNAMRGKFLGLSGYCDFVADSVEGLKREGEISLSEYLNDCREAGIDPYVRQEKTKTFTLRYNESFAEKLTQAAAEKGKSLNAFIIEILEAQLSLI
>NZ_CP034363.1|WP_147194635.1|567416_568121_-|pirin-family-protein
MITSRTAQECGKADYGWLQARYTFSFGHYFDPQLMGYASLRVLNQEVLTPGASFQPRTYPKVDVLNLILQGEAEYRDSDGNHVIARQGEALLFATQPTISYSEHNLSKDRPLTRMQLWLDACPERENAAVQRMTVDEHARHTLMASPDGQKGSLQLRQQVWIHHLLLEPGESYTVELHGSRAYLQSIHGSLSAVTHSEAEEKLICGDGAFIREEQSVTLRADTPLRALVIDLPV
>NZ_CP034363.1|WP_147194638.1|568246_569152_+|LysR-family-transcriptional-regulator
MAKDRALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALIPCEYLFPLIDKLADKANTQISLVTEVLAGAWERLEQGRADIVIAPDMHFRASSEINTRKLYSIMSVIVASPGHPIHDEPEPLSEVSRVKYRGIAVADTARERPVLTVQLLDKQQRLTVSSIEDKHRALLAGLGVASMPYPMVEKDIAEGRLRVVSPEYTKEVDIIMAWRRDSMGEAKAWCLREIPKLLAKRHSL
>NZ_CP034363.1|WP_147194641.1|569179_570166_-|glutathione-S-transferase-family-protein
MGQLIDGVWHDNWYDTKSTGGRFKRSESVWRNWVTADGSAGPTGKSGFRAEADRYHLYVSLACPWAHRTLLMRTLKGLESLIAVSVVHPLMLENGWTFDEDFAAATGDSLYQNDFLYQLYLHADKNYTGRVTVPVLWDKQQNTIVSNESADILRMFNSAFDAVGARAGDFYPADLRGKIDEVNSWVYDTVNNGVYKAGFATSQAAYDEAVTALFHSLERLEQMLGQHRYLTGDRLTEADLRLWTTLVRFDPVYVTHFKCDKHRIGDYLNLNGFLREIYQLPGVAETVNLAHIRHHYYHSHKTINPSGVISTGPAFDWDEPHGRDARFR
>NZ_CP034363.1|WP_168199584.1|570523_570886_-|hypothetical-protein
METSGSTLKISRRFKNIFMAEMHNQDDFLAAICDMALIPTLTIPTIPDPILLMALTISSSRILPMPEPSVPPAVVASVVKPPAEVPKSTIPPIALPILLPKSAKNRHLKQLQLPECLTRA
>NZ_CP034363.1|WP_147194643.1|571017_571410_-|DoxX-family-membrane-protein
MKKSEDVGFLVARILLPVLFIVAGWGKITGYAGTQQYMEAMGVPGFFLPLTILLEFGGGLAILFGFLTRFTAIATAIFTLITALVFHTNFSVDGNSINFMKNLSIAGGYLLLFITGPGAYSIDRIWRKKS
>NZ_CP034363.1|WP_147194646.1|571645_571927_-|hypothetical-protein
MSRERNERKAELLRQIHQQRLDLSINTKYWLESTARYDRGWLTVVSLRRYFAVGSGLMAIWSVRNPRFITRWAKRGLGAWSTWRMVRNFLPNR
>NZ_CP034363.1|WP_147194649.1|571926_572319_-|hypothetical-protein
MADYQQSQGPGKGVVNIGQRIITTLVGIVETRVRLAVVELEEEKANLIQMLIMIGLTMLFTAFGLMSLMVLIIWAVDAQYRLMAIGITTAVLFALAIIFGLWTLAKSRRSTLLNATRKELKSDRKLLEDE
>NZ_CP034363.1|WP_147194652.1|572320_572626_-|DUF883-family-protein
MSKDTTSEHLRAELKNLADTLEEVLSNTGEKSKNELDKLRSKAQSALKDTRARLGDSGDRIAQTSREVADHADVYVRENPWTSVGIGAAIGVVLGVLLTRR
>NZ_CP034363.1|WP_147194655.1|572668_573040_-|DUF1090-family-protein
MKYRILGLSLLTLTTFAQAAESLCLQKEQDIQHEIDLARQHDNQRRVTGLERALTEARAGCTDAKLRDNHQVKIKEHQQKVDERQKELDQEKADGDDSKKIAKREQKLAEAKRELKEVLAAPY

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Crispr_ID: NZ_CP034363_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034363_2

867663-867996

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

5 spacers

The CRISPR arrays of NZ_CP034363_2

>merge|NZ_CP034363|2|867663-867996|CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCACATGCGTGGGGATAAACCGATGCCGACCTCGTGGAATCCATTATCGCCCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGTTAGGCAGTTCAAGGAAACGGCAAGAGATGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCTCGACTCCGGCGAGAAAATTGGTGCGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGATACAATAATACCCTATCCTCCATACCTTCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCATATAGCCCGGCTGGCGGTCGCCCGGTGCGTGTTCCCTGCGCCAGCGGGGATAAACCG

>NZ_CP034363|2|1|867663-867996|CRISPRCasFinder
GTGTTCCCCACATGCGTGGGGATAAACCG	ATGCCGACCTCGTGGAATCCATTATCGCCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGTTAGGCAGTTCAAGGAAACGGCAAGAGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCTCGACTCCGGCGAGAAAATTGGTGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATACAATAATACCCTATCCTCCATACCTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCATATAGCCCGGCTGGCGGTCGCCCGGTGC
GTGTTCCCTGCGCCAGCGGGGATAAACCG

>NZ_CP034363|2|1|867663-867996|CRT
GTGTTCCCCACATGCGTGGGGATAAACCG	ATGCCGACCTCGTGGAATCCATTATCGCCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGTTAGGCAGTTCAAGGAAACGGCAAGAGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCTCGACTCCGGCGAGAAAATTGGTGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATACAATAATACCCTATCCTCCATACCTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCATATAGCCCGGCTGGCGGTCGCCCGGTGC
GTGTTCCCTGCGCCAGCGGGGATAAACCG

>NZ_CP034363|2|2|867724-867996|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGTTAGGCAGTTCAAGGAAACGGCAAGAGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCTCGACTCCGGCGAGAAAATTGGTGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATACAATAATACCCTATCCTCCATACCTTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCATATAGCCCGGCTGGCGGTCGCCCGGTGC
GTGTTCCCTGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034363.1\|WP_147195291.1\|878223_879513_-\|glycoside-hydrolase-family-28-protein	unknown	unknown	gnl\|CDD\|227721
NZ_CP034363.1\|WP_147195263.1\|855465_855729_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034363.1\|WP_147200517.1\|860320_861085_+\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879
NZ_CP034363.1\|WP_147195273.1\|863905_865801_+\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP034363.1\|WP_147195281.1\|871202_872201_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381302
NZ_CP034363.1\|WP_147195269.1\|858459_859815_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182324
NZ_CP034363.1\|WP_147195286.1\|876571_877381_+\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|365866
NZ_CP034363.1\|WP_168199590.1\|868320_868527_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367029
NZ_CP034363.1\|WP_147195271.1\|861228_863892_+\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP034363.1\|WP_147195265.1\|855838_856825_-\|family-43-glycosylhydrolase	unknown	unknown	gnl\|CDD\|226449
NZ_CP034363.1\|WP_147195267.1\|856821_858234_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225121
NZ_CP034363.1\|WP_147195283.1\|872994_875592_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP034363.1\|WP_147195279.1\|870194_871103_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176163
NZ_CP034363.1\|WP_147195260.1\|854515_855370_+\|beta-lactamase-regulator-AmpE	unknown	unknown	gnl\|CDD\|374997
NZ_CP034363.1\|WP_147195288.1\|877724_878087_+\|UPF0231-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP034363.1\|WP_168199670.1\|865983_867408_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP034363.1\|WP_147195293.1\|880705_881383_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP034363.1\|WP_147195285.1\|875736_876093_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034363.1\|WP_147195257.1\|853946_854510_+\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP034363.1\|WP_147195277.1\|869034_869997_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|368098

Protein	Function_ID	Function_description	E-value
NZ_CP034363.1\|WP_147195291.1\|878223_879513_-\|glycoside-hydrolase-family-28-protein	gnl\|CDD\|227721	COG5434, PGU1, Endopygalactorunase [Cell envelope biogenesis, outer membrane].	7.96271e-59
NZ_CP034363.1\|WP_147200517.1\|860320_861085_+\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	2.65381e-170
NZ_CP034363.1\|WP_147195273.1\|863905_865801_+\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP034363.1\|WP_147195281.1\|871202_872201_+\|aldo/keto-reductase	gnl\|CDD\|381302	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR). Schizosaccharomyces pombe aldo-keto reductase YakC is a founding member of aldo-keto reductase family 13 member A1 (AKR13A1). It catalyzes the reversible reduction of ketones to the respective alcohols using NADP(+) as a hydride donor. Rauvolfia serpentina PR is a founding member of aldo-keto reductase family 13 member D1 (AKR13D1). It catalyzes the NADPH-dependent reduction of the aldehyde perakine to yield the alcohol raucaffrinoline in the biosynthetic pathway of ajmaline in Rauvolfia, a key step in indole alkaloid biosynthesis. This family also includes Arabidopsis thaliana aldo-keto reductases, ALKR1-6.	5.3893e-171
NZ_CP034363.1\|WP_147195269.1\|858459_859815_-\|amino-acid-permease	gnl\|CDD\|182324	PRK10238, PRK10238, aromatic amino acid transporter AroP.	0
NZ_CP034363.1\|WP_147195286.1\|876571_877381_+\|trypsin-like-serine-protease	gnl\|CDD\|365866	pfam00089, Trypsin, Trypsin.	3.24641e-07
NZ_CP034363.1\|WP_168199590.1\|868320_868527_-\|hypothetical-protein	gnl\|CDD\|367029	pfam02311, AraC_binding, AraC-like ligand binding domain. This family represents the arabinose-binding and dimerization domain of the bacterial gene regulatory protein AraC. The domain is found in conjunction with the helix-turn-helix (HTH) DNA-binding motif pfam00165. This domain is distantly related to the Cupin domain pfam00190.	0.000159511
NZ_CP034363.1\|WP_147195271.1\|861228_863892_+\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP034363.1\|WP_147195265.1\|855838_856825_-\|family-43-glycosylhydrolase	gnl\|CDD\|226449	COG3940, COG3940, Predicted beta-xylosidase [General function prediction only].	2.30446e-177
NZ_CP034363.1\|WP_147195267.1\|856821_858234_-\|MFS-transporter	gnl\|CDD\|225121	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].	4.90209e-176
NZ_CP034363.1\|WP_147195283.1\|872994_875592_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP034363.1\|WP_147195279.1\|870194_871103_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176163	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 5. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.67537e-86
NZ_CP034363.1\|WP_147195260.1\|854515_855370_+\|beta-lactamase-regulator-AmpE	gnl\|CDD\|374997	pfam17113, AmpE, Regulatory signalling modulator protein AmpE. AmpE is a family of bacterial regulatory proteins. AmpE in conjunction with AmpD sense the effect of beta-lactam on peptidoglycan synthesis and relay this signal to AmpR. AmpR regulates the production of beta-lactamase.	1.10885e-170
NZ_CP034363.1\|WP_168199670.1\|865983_867408_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP034363.1\|WP_147195293.1\|880705_881383_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.88446e-46
NZ_CP034363.1\|WP_147195288.1\|877724_878087_+\|UPF0231-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	3.62732e-65
NZ_CP034363.1\|WP_147195257.1\|853946_854510_+\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	2.18545e-133
NZ_CP034363.1\|WP_147195277.1\|869034_869997_-\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|368098	pfam04754, Transposase_31, Putative transposase, YhgA-like. This family of putative transposases includes the YhgA sequence from Escherichia coli and several prokaryotic homologs.	2.19783e-112

>NZ_CP034363.1|WP_168199670.1|865983_867408_+|dihydrolipoyl-dehydrogenase
MSTEIKTQVVVLGAGPAGYSAAFRAADLGLETVIVERFSTLGGVCLNVGCIPSKALLHVAKVIEEAKALEEHGIVFGKPQTDINKIRSWKEKVINQLTGGLSGMAKGRKVNVVTGLGKFTGANTLVVEGEEGTTTINFDNAVIAAGSRPIQLPFIPHEDPRVWDSTDALELKEVPERLLVMGGGIIGLEMATVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKQFNLMLETKVTAVEAKDDGIYVSMEGKKAPAEPQRYDAVLVAIGRVPNGKGLDAGKAGVEVDDRGFIRVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAVVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIFEGSITDLPNAKAKKK
>NZ_CP034363.1|WP_147195273.1|863905_865801_+|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MAIEIKVPDIGADEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPSPEAGVVKEIKIATGDKVETGSLIMIFESADGAATEAAPAKAEEKKEAAQPQTASAENKEVNVPDIGSDEVEVTEILVKVGDTVEAEQSLITVEGDKASMEVPAPFAGTVKEIKIGTGDKVSTGSLIMIFETTGSAPTAEAKPEVKEEAAATPAAASGAKDVEVPDIGGDEVEVTEIMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGTVKEIKIATGDKVSTGSLIMVFEVEGAAPAAAPAAKKEDAAPAPKQAAAAPAPAPAKAESKGDFTENDAYVHATPVIRRLAREFGVNLAKVKGSGRKGRILKEDVQAYVKDAVKRAETAPAAAAGGGLPGMLPWPKVDFSKFGEIEEVELGRIQKISGANLSRNWIVIPHVTQHDKADITEVEAFRKQQNDEAAKKKLDLKITPLVFIMKAAAKALEEFPRFNSSLSEDGQKLTLKKYINIGVAVDTPNGLVVPVFKDVNKKGIIELSNELSVISKKARDGKLTASDMQGGCFTISSLGGIGGTSFTPIVNAPEVAILGVSKSSMEPVWNGKEFVPRLMLPLSLSFDHRVIDGAAGARFAAYIATIMADIRRLVM
>NZ_CP034363.1|WP_147195271.1|861228_863892_+|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSERLHNDVDPIETRDWLQAIESVIREEGVERAQFLIDQVMSEARKNGVKVAAGAGASNYVNSIAVEDEPDYPGNTSLERRIRSAIRWNAIMTVLRASKKDLELGGHMSSFQSSATIYEVCFNHFFRARSEKDGGDLVYFQGHISPGVYARAFLEGRLTEEQMNNFRQEVHGKGLSSYPHPKLMPDFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTAQQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFIINCNLQRLDGPVTGNGKIINELAGIFGGAGWEVIKVIWGARWDELLRKDTSGKLVQLMNETVDGDYQTFKSRDGAYVREHFFGRYPETAELVKDMTDDEIWALNRGGHDPKKIYAALKKAQDTKGKPVVILAHTIKGYGMGDTAEGKNIAHQVKKMNMDGVRYIRDRFNVPVDDANIENLPYITFDKASEEYKYLHGQREKLGGYLPTRQPNFSEKLEMPALEDFRQLLDEQNKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLVGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLVRMYGDAQENIYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVRDAAQILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPTDEPRVPYVAQIMNDAPAVASTDYMKLFAEQIRTFMPASDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGELAKRGEIDKNVVAEAITKFNIDADKVNPRLA
>NZ_CP034363.1|WP_147200517.1|860320_861085_+|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MAYSKIRQPKLSDAIEQQLESLIMEGTLRPGEKLLPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGGGTFVQTSLWQSLSDPLVELLAGHPESQFDLLETRHALEGIAAYYAALRGTDDDIERIRHCHVQIQTAQDSGDLDAEADAVMQYQIAVTEAAHNVVLLHLLRSMGPMLKQNVRQNFELLYSRREMLAKVGGHRARIFEAIVAREPEKAREASHRHLAFIEEILLDRSREQSRRERSLRRLQQRKE
>NZ_CP034363.1|WP_147195269.1|858459_859815_-|amino-acid-permease
MEQQQGEMLKRGLKNRHIQLIALGGAVGTGLFLGIAQTIKMAGPSVLLGYAIGGFIAFLIMRQLGEMIVEEPVAGSFSHFAYKYWGNFAGFASGWNYWVLYVLVAMAELTAVGNYIQVWYPQFPSWAAAAIFFVLINAINLSSVKIFGEMEFWLAIVKVVAVVAMIVFGCWLLFSGNGGPDAAVSNIWAIGGFFPHGVGGLVMAMAIIMFSFGGLELVGITAAEADNPEKSIPQATNQVIWRILIFYVGSIIVLLSLYPWTKVTEHSSPFVMIFHDLGETLAANILNLVFLTAALSVYNSCVYSNSRMLYGLARQGNGPKALLKVDRRGVPYVALGFSALTTAICVLVNYLMPGEALNLFMALVVSALVINWAMISYAHLKFRRKKDQQGVQTRFKAMLYPAGNWICLLFMVAILVIMALTPGMAISVWLIPVWVAVLAVGYAVKNRMQKA
>NZ_CP034363.1|WP_147195267.1|856821_858234_-|MFS-transporter
MKGMALSVKEKIGYGMGDAGCNMIGGAIMLFLNYFYTDVYGLAPALVGVLLLSVRVIDAVTDPIMGAIADRTQSRWGRFRPWLLWISLPYVLFSVLMFTTPDWSYDNKVIYAFATYFLMSLTYTAINIPYCSLGGVITNDPGERVSCQSYRFVMVGVATLILSLSLLPLAEWFGGEDRARGYQMAMSVLAFIGLCMFLFCFATVRERIHPAVPSNSDLKSDLRDVWKNDQWVRILLLTFCNVCPGFIRMAATMYYVTWVMGQSTHFATLFISLGVVGMMLGSTLAKILTDRWCKLKVFFWTNIVLALFSSGFYFLDPHATVLVVVMYFLLNILHQIPSPLHWSLMADVDDYGEWKTGKRITGISFSGNLFFLKVGLAVAGAMVGFLLSYYGYNAGAKTQSPVAINGIVLLFTVIPGVGYLITAGVVRLLKVDRPTMQKIQLELEQRRHNFRELNDYHHGKAPVKPEGTEA
>NZ_CP034363.1|WP_147195265.1|855838_856825_-|family-43-glycosylhydrolase
MSTSHWAVPLIEQRADPFILLHDNYYYFIASVPEYDRLELRRSETLAALVQAEPVVIWQKPDRGEMSELIWAPELHRIDSTWVIYFAAAPTREIKDGLFQHRMFALTCTADDPLTGEWRECGRVETPLNSFSLDATHFVHQGKNWYLWAQKDPAIPGNSNLYLAELANPWSLKSKPVMLSRPEYDWECVGFSVNEGPAVIRHGNRLFVSYSASATDENYCMGLLWIDIDADPMAANNWQKSPVPVFKTSRENRQFGPGHNSFTVAETGEDVLVYHARNYTEIEGDPLYDPNRHTCIKTFSWDNDGMPVFGIPPANAPSGESKKADEID
>NZ_CP034363.1|WP_147195263.1|855465_855729_-|hypothetical-protein
MRELSVMEIENVSGAGVFADMTTWMGSTAGDFIGSSIGSLVAIPVISTVVSKATGYVGKQIGSFIGSAFGNWVEGWFSSTDNSHASA
>NZ_CP034363.1|WP_147195260.1|854515_855370_+|beta-lactamase-regulator-AmpE
MTLFSLLLVLGWERLFKSGEHWQLDHHLSKVFRRQQRFSMGRTLAMMLIAMALVALCLLALKGLFFGLLQLLFWIGVGLLCIGAGSVRLHYHAYLKAASRNDIDAHTALAEELTLIHGLPIECNEREYLCELQNALLWINYRFYLAPLFWFVVGGAWGPVLLVGYAFLRAWQSWMARHHTPLERSQSGVDALLHCIDWIPVRLVGVAYALLGHGERALPAWFASLGDRHTSQYQVLTRLAQFSLARDLHTDKVETPRIAVALAKKVSLVIVVVVALLTIYGTLV
>NZ_CP034363.1|WP_147195257.1|853946_854510_+|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MQLQAGWLTGVRRVPSPHFNERPLLETPTLLVIHNISLPPGEFGGPWIDDLFMGTLDPSAHPYFAGIAHLRVSAHCLIRRDGEIVQYVPFHLRAWHAGVSRYQEREACNDFSIGIELEGTDCLAYTDEQYQALQNVTQLLAEHYPQIAENITGHSDIAPERKTDPGPAFDWVRYRAGLRSGNVTKQE
>NZ_CP034363.1|WP_168199590.1|868320_868527_-|hypothetical-protein
MHDEYVISANLSGIEEIWLAGKTSNVESGQVILYNPGTIQTSRFDNKDVEFISIHPPQSVLKKFGRGR
>NZ_CP034363.1|WP_147195277.1|869034_869997_-|Rpn-family-recombination-promoting-nuclease/putative-transposase
MSDRKAKGRRNASPTPHDLAFKQFLTHPATARDFMQLHLPAELQAVCDFSTLKLESGSFVEETLRPYFSDVLYSLKTTTGDDGYVHVLIEHQSTPDRHMAFRLLRYAVAAMQRHLDAGHKKLPLVIPVLFYTGKRTPYPYSTRWLDEFNHPGLAGKLYGGEFPLVDVTVISDDEIMGHRSMAALTLLQKHIHRRDLAELLDRLATLLLREPVTGQQLTSLINYLIQTGETADAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGLEKGLEKGIQLGEKRGIEKGKLEVASTMLQNGLDRNTIMKMTGLTEDDLAQIRH
>NZ_CP034363.1|WP_147195279.1|870194_871103_-|LysR-family-transcriptional-regulator
MKSRATLQELEIFTAIARHRNFRKAAEERNVTPSTLSHTISNLEQRIGVRLLNRTTRSVSLTEAGQAFLQRIEPTIQDLSLAVDELNDWRIAPRGTLRLNLPRSAEALYLRTVLLPFRERYPDIALEVTTSDGLINIVETGFDAGVRFGEAIPQDMVAIPFGPRLQGAVIASPDFIERFGVPQHPLELVDFPCIQRRFPSGINYKWEFCENGRPLNIAVAGGLTLDSDYIMIEAVGAGAGLAFVIRDLVRSKLKSGELVEVLADFAAPSEGFSLYYPSRKYHSTALSCFIAWLRAFNRACES
>NZ_CP034363.1|WP_147195281.1|871202_872201_+|aldo/keto-reductase
MKRRTLGHQGLEVSAIGLGCMGMTFAYGKSDEQQAINTLHRAFDLGVDFLDTAEVYGPFDNEELLAKALKGRKEQIKVATKFGFNILPQGEGWERIKGVNSQPANIRKVAETSLKRLNIEAIDLFYQHRPDPVVPVEEVMATLADLVREGKILHVGLSEVSSETLRRAHAIHPVSALQSEYSLWSRDVERDVLATCQQLNIGFVPYSPLGRGFLTGKLAAPSTLDERDYRRTLPRFQPDALAHNEKLVGQLGEMAAGYNSTTAQLALAWVLAKWQHIVPIPGARKIAHLEDNCRAADIVLMAEDVALLDQLFSPENIAGERYSETEFALVER
>NZ_CP034363.1|WP_147195283.1|872994_875592_+|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAQGIVPKPLDASQMAALVELLKNPPAGEEEFLSDLLINRVPPGVDEAAYVKAGFLAAVAKGEATSPLVTPEKAIELLGTMQGGYNIHPLIDALDDEKLAPIAAKALSHTLLMFDSFYDVEEKAKAGNPHAQKILQSWADAEWYLSRPELAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNDREGIEPNEPGNVGPIRQIEALQAKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPYVPNKKGGGVVLGNNIAPIFFNTMEDAGALPIEVDVQNLNMGDVIDIWPYKGEVKNHETGEVLANFSLKTDVLLDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVATSTRGYSLAQKMVGRACGTEGVRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVSTHHTLPDFIMNRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMEPGITLRDLVHAIPLYAIKAGLLTVEKKGKKNIFSGRILEIEGLPDLKVEQAFELSDASAERSAAGCTIKLGKDPIIEYLNSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLADPQLLEGDADAEYAAVIEIDLAEIKEPILCAPNDPDDARLLSDVQGEKIDEVFIGSCMTNIGHFRAAGKLLDSHKGQLPTRLWVAPPTKMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVQDGATVVSTSTRNFPNRLGTGANVYLASAELAAVSSLLGKLPTPDEYQQFMNQVDKTAVDTYRYLNFDQLAQYTDKADGVIFQTAV
>NZ_CP034363.1|WP_147195285.1|875736_876093_-|hypothetical-protein
MKFNVILAVTTCLFSSIPLTSLADTQCGPFHLQSSAEGKVSSVNGVKVRKQKIDFLARKEDYNNVSMRWIVAATKFQGDYAMHYVKQKGKPTLDVEIVRSSRSGIRISGSYDCEKKDQ
>NZ_CP034363.1|WP_147195286.1|876571_877381_+|trypsin-like-serine-protease
MKIKTIISGSGIILCLLIPFSGTARAENIKFSDSAIKAEGHCNPGDDIHTLFPSGYSLPSVVMIYVNDSSGKPVDWGTGTFISPDKILTAGHVAYNMQQYQKKGKKVYITAGLHEPEPGTAYEIKSIAIHPEMNLDTSDHDIAVITTTKNYPTRTYPITEITADLPDAFFGSVSYPSGLIEKIGKFNQYTARFKIDGHLYSSAVALTKCLTYGGESGAALIGYQNDSPLNGKIVGVLSSGSGDHPGDPTTLTYYTTLSGSNYKFITDNL
>NZ_CP034363.1|WP_147195288.1|877724_878087_+|UPF0231-family-protein
MEYEFLRDITGGVKVRMSMGHEAVGHWFNEEAADNLALLDEVEAAVAEVKGSERQWQRVGREYTIWLDEEEVIIRANLLSIEGDEMEEGMSYYDEESLCFCGVEDFLAVIAAYRAFLQGR
>NZ_CP034363.1|WP_147195291.1|878223_879513_-|glycoside-hydrolase-family-28-protein
MAVLNVLDFDAVPDATTLSTQAIQRAIDRAAPGDSVLIPAGRFLTGSLFLKSHMTLELAEGAVLLGSQQLVDYRRIETRIAGIDMPWPAAIININQCRNVKVTGAGTVDGQGAVWWHRFWGDDEKSGVLAEYSEQGLRWVVDYECERPRNVVVYQSDEVELSGFTSRESGFWNIHLCYSKHVILQNVKVSNSTGPSTDGIDIDSCQHVRVERCMVSCNDDNICVKSGRGAEAQTLARKASEIIIRDCELHKGSGITLGSETSGGIEKVIIEHNRFFGTGVGFRIKSARNRGGFIRDIIVRHLTLKDVCYPFMMQLNWFPQYSYGQKISDDRPLHWRKLSEGVEGIEGLTRLENITISHITSQLTQPQNFSRAFFIEGAAECPIKNLTFSHLHLQAQEFGKIAGVTHLRFEQVNVDAPAMTLTENDTYER
>NZ_CP034363.1|WP_147195293.1|880705_881383_-|SDR-family-oxidoreductase
MNRHALVTGASSGIGAAVTDKLLAEGWRVTGLSRTAVKRDNPHFASRSVDLFDTAALKQTLATLPPVDAIIHAAGMMTAAQLGELDDGVSEQLWHLHIRVAEILANELVAQLPKGGRIVLLGSRTSTGAAGRSQYVSTKSAMKGMVRSWAAELAPRGITANIVAPGATETPMLTKPGRESSPPKLPPIGRYIQPQEVAALVSFLLSPTADAMTGQELVLCGGASL

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Crispr_ID: NZ_CP034363_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034363_3

2302069-2302175

Orphan

Consensus_repeat	Method
ACAGGACATCGGTAGCAGTCATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP034363_3

>merge|NZ_CP034363|3|2302069-2302175|CRISPRCasFinder
ACAGGACATCGGTAGCAGTCATCAGAGCCTCCTTTGGAAAGTGCGGTTCGGCAGTTCAGTGGCGCCAATAGGGAATGGGTGAGACAGGACATCGGTAACAGTCATCA

>NZ_CP034363|3|2|2302069-2302175|CRISPRCasFinder
ACAGGACATCGGTAGCAGTCATCA	GAGCCTCCTTTGGAAAGTGCGGTTCGGCAGTTCAGTGGCGCCAATAGGGAATGGGTGAG
ACAGGACATCGGTAACAGTCATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034363.1\|WP_147197779.1\|2310807_2311317_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP034363.1\|WP_147197773.1\|2307874_2309026_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349919
NZ_CP034363.1\|WP_147197748.1\|2292758_2294078_-\|NtaA/DmoA-family-FMN-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|274819
NZ_CP034363.1\|WP_168199617.1\|2302480_2302732_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034363.1\|WP_147200595.1\|2303896_2304823_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|223787
NZ_CP034363.1\|WP_147197757.1\|2298241_2298910_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224922
NZ_CP034363.1\|WP_147197746.1\|2289779_2290013_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034363.1\|WP_147197755.1\|2297222_2298245_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|236863
NZ_CP034363.1\|WP_147197775.1\|2309034_2309856_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP034363.1\|WP_168199616.1\|2290129_2292541_-\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	unknown	unknown	gnl\|CDD\|274418
NZ_CP034363.1\|WP_147197771.1\|2307020_2307860_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|379203
NZ_CP034363.1\|WP_147197777.1\|2309874_2310798_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223836
NZ_CP034363.1\|WP_147197753.1\|2295978_2296938_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP034363.1\|WP_147197760.1\|2298924_2299737_+\|methionine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270315
NZ_CP034363.1\|WP_147197770.1\|2305922_2306975_+\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|107204
NZ_CP034363.1\|WP_147197766.1\|2302876_2303884_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223673
NZ_CP034363.1\|WP_147197762.1\|2300019_2300400_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP034363.1\|WP_147197768.1\|2305128_2305911_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224041
NZ_CP034363.1\|WP_147197751.1\|2294637_2295639_-\|MsnO8-family-LLM-class-oxidoreductase	unknown	unknown	gnl\|CDD\|274646
NZ_CP034363.1\|WP_147197749.1\|2294074_2294641_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP034363.1\|WP_147197779.1\|2310807_2311317_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.05614e-12
NZ_CP034363.1\|WP_147197773.1\|2307874_2309026_-\|amidohydrolase	gnl\|CDD\|349919	cd05669, M20_Acy1_YxeP-like, M20 Peptidase aminoacyclase-1 YxeP-like proteins, including YxeP, YtnL, YjiB and HipO2. Peptidase M20 family, aminoacyclase-1 YxeP-like subfamily including YxeP, YtnL, YjiB and HipO2, most of which have not been well characterized to date. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity; substrates include indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as in the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine). ACY1 appears to physically interact with Sphingosine kinase type 1 (SphK1) and may influence its physiological functions; SphK1 and its product sphingosine-1-phosphate have been shown to promote cell growth and inhibit apoptosis of tumor cells. Strong expression of the human gene and its mouse ortholog Acy1 in brain, liver, and kidney suggest a role of the enzyme in amino acid metabolism of these organs.	0
NZ_CP034363.1\|WP_147197748.1\|2292758_2294078_-\|NtaA/DmoA-family-FMN-dependent-monooxygenase	gnl\|CDD\|274819	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP034363.1\|WP_147200595.1\|2303896_2304823_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|223787	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism].	1.33513e-34
NZ_CP034363.1\|WP_147197766.1\|2302876_2303884_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	1.1324e-37
NZ_CP034363.1\|WP_147197771.1\|2307020_2307860_-\|VOC-family-protein	gnl\|CDD\|379203	pfam13468, Glyoxalase_3, Glyoxalase-like domain. This domain is related to the Glyoxalase domain pfam00903.	1.08348e-35
NZ_CP034363.1\|WP_147197755.1\|2297222_2298245_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|236863	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional.	9.66058e-166
NZ_CP034363.1\|WP_147197775.1\|2309034_2309856_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	8.92475e-138
NZ_CP034363.1\|WP_168199616.1\|2290129_2292541_-\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	gnl\|CDD\|274418	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.	0
NZ_CP034363.1\|WP_147197777.1\|2309874_2310798_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.57496e-63
NZ_CP034363.1\|WP_147197753.1\|2295978_2296938_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	5.00762e-115
NZ_CP034363.1\|WP_147197760.1\|2298924_2299737_+\|methionine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270315	cd13597, PBP2_lipoprotein_Tp32, The substrate-binding domain of the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum binds L-methionine; the type 2 periplasmic-binding protein fold. This group includes the lipoprotein Tp32, a periplasmic component of a methionine uptake transporter system, and its closely related homologs. The Tp32 has both structural and sequential homology to the MetQ family of substrate-binding protein, and thus it belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea.	2.6354e-102
NZ_CP034363.1\|WP_147197770.1\|2305922_2306975_+\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|107204	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.	3.01987e-114
NZ_CP034363.1\|WP_147197757.1\|2298241_2298910_+\|ABC-transporter-permease-subunit	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	2.27405e-97
NZ_CP034363.1\|WP_147197762.1\|2300019_2300400_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	7.26595e-31
NZ_CP034363.1\|WP_147197768.1\|2305128_2305911_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	2.04639e-118
NZ_CP034363.1\|WP_147197751.1\|2294637_2295639_-\|MsnO8-family-LLM-class-oxidoreductase	gnl\|CDD\|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	1.19181e-103
NZ_CP034363.1\|WP_147197749.1\|2294074_2294641_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	0.000486762

>NZ_CP034363.1|WP_147197762.1|2300019_2300400_-|helix-turn-helix-transcriptional-regulator
MSKEVLELPLNVTVTRPILEHIANKWTVLILNVLCMQPVRFNDLKRRLDGITHKALSEALKRLERNGLVSRKVLPTQPVGVEYTITDLGSSLREPFSALYNWSLANGSAMERAQRAYDTSRKDGGL
>NZ_CP034363.1|WP_147197760.1|2298924_2299737_+|methionine-ABC-transporter-substrate-binding-protein
MKKTLTLLAAATLGALSLSAWADTLTVGASNVPHAEILEQAKPVLAKQGIDLEIKPFQDYILPNTALASRDIDANYFQHVPYLNSVLKDHADDKSYDFVSAGAIHIEPIGIYSKKYKSLKDLPQNGKVIMRDAVAEEGRILTIFEKEGVIKLKPGVSKVDARISDIVENPKHLKFLANVEGALLPQMYNNDEGDAVVINANYAIDAGLDPVKDPIAVESGENNPYANIITVHRGDENKPDIKALVTVLHSKQIQDWIRTKYKGAVIPVNN
>NZ_CP034363.1|WP_147197757.1|2298241_2298910_+|ABC-transporter-permease-subunit
MIESLFPHLKLDQLWAATCETLYMTALSGVATFVLGILLGLALFLTARGGLFQNRAVYSVISVLVNVFRSIPFIILIVLLIPFTKTLIGTILGADAALPALIVGAAPFYARLVEIGLREVDKGVIEASRSMGARMSTLIFRVLLPESSPALVSGITVTLIALVSYSAMAGVIGAGGLGNLAYLEGFQRNHSDVTLVATVMILVIVFIIQFLGDVLTTRLDKR
>NZ_CP034363.1|WP_147197755.1|2297222_2298245_+|ATP-binding-cassette-domain-containing-protein
MIVLRNVSRTFHGSAGPIKAVDDVSLKVDQGQIYGIIGYSGAGKSTLIRLLNGLEKPTSGSVTIAGKDIAQAKGEALRTARLKISMVFQHFNLLWSRTVSENIAFSLQIAGAPKAAIKARVKELIELVGLNGKEDTYPANLSGGQKQRVGIARALANNPEVLLCDEATSALDPQTTDAILDLLLDINRKLQLTIVLITHEMHVVRKICHRVAVMEAGRIVEEGEVLSVFTHPQMPITRQFVKQTTEYSSADTPFNPALVDYSAGNVLKLTFVGQNTRQPIVGELTLKYALPFNILHGKMTQTANGNLGELWLQVAASNSQLESILADLHAHAITTEVVTK
>NZ_CP034363.1|WP_147197753.1|2295978_2296938_+|Rpn-family-recombination-promoting-nuclease/putative-transposase
MAKTNGKRQKGFSGTPHDSAFKWFLTQPDIAKDFMALHLPAELQSICDLNTLKLESGSFVEESLRLCYSDILYSVKTTEGNGYIHVLIEHQSTPDRHMGFRLLRYAVAAMQRHLDAGYSQLPLVIPILFYTGRQSPYPYSTNWLAEFDNPALAEKIYTASFALVDVTVIPDDDIMSHRSMAALTLLQKHIYQRDLIDMVNRLADVLLNGYLTGQQLVSLINYLIQAGEASNAKIFIRELAQRLPQHKDELMTIAQQLEQAGIEKGIEKGIQLGEQRGIEKGRKEEALKIAQAMLKNGLERATILKLTDLTEGDLAQIHH
>NZ_CP034363.1|WP_147197751.1|2294637_2295639_-|MsnO8-family-LLM-class-oxidoreductase
MGYRLSLLEKSPVDGQEGAAAALQRTLALAQSAERWGFHRFWLSEHHNNPQLAISSPEITIAWILAQTRRIRVGSGGVMLQHYSPFKVAENFNQLASLAPGRVDLGVGKAPGGLPLSTRELQQGIPGADFPARLQQLTNWLLSPAAANEPDSPIVTPVPPEPAERFLLGASVATARLAAESGWQFVFAAQLNGSEEEISSAIGTYHRLSHGRKALLAVPVVVADSKEQAEDLLGPRQQFRLTDAEGHHVSVGSLEQAEAWIRQSGGGPHDIEERPSLVLTGTTAQVHRQLATLQARYGIDEFVIDTPISNATARLASLTALASGYDVLSGATL
>NZ_CP034363.1|WP_147197749.1|2294074_2294641_-|GNAT-family-N-acetyltransferase
MNRIRLAREDEAPQLHALLQRAYASLLKHNIHFTITRASVEDVLAVIRRESTFVLETERGLTATITVRMPWLAAENDPARWPFIHWFAVDETAKTQGYGSQIIRYAEEDFLRDTLKSPAVYLATAIRHPWLTSLYEQRGYQPFHYRVNPLGVELVYMKKDLKLAVNSFTPSQPSPDLCVKRARSGGLA
>NZ_CP034363.1|WP_147197748.1|2292758_2294078_-|NtaA/DmoA-family-FMN-dependent-monooxygenase
MNRQLHLGAIIQGASGNMSAWRHPDAVADASINVQFCQQLARKAEQGKFDLLFVADGLYITEKSIPHFLNRFEPITLLSALSLVTKHIGLVATLSTSYSEPFTVARQFASLDHLSGGRAGWNVVTSPLEGSAKNFSRLVHPEHDERYRIAAEFVTVVKGLWDSWEGDAFIRNKQTGQFFAPEKMHTLNHQGDYYHVQGPLNVGRTPQGRPIVFQAGASDRGKAFAAQAADAIYTRQETPELAKAYADDVRRQRVANGGKPESILLFQGISVIIGESLEEAERRYQQTAQLVTLEQALDYLGRYFEHHDFSQYDPEAPFPDIGDLGSNSFRSTTDTIKKQAAERSLTLRQVALEAATPRPTFLGTAKDVADGLAHWFTTGAADGFIVRGGTPTSFDDFVDQVVPILQQRGLYRTEYAGATLRENLGLTEPENQFVAKQGE
>NZ_CP034363.1|WP_168199616.1|2290129_2292541_-|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family
MLKKLFTFSSLTGIVVGLFGLAFLLLGGWLAALGGSPWYLLFGAGFLLSGILIVRRQAAGIWLYLLSFIVCLIWSLWEVGLDGWQLMPRLFALAVLGVWCSMPWVTRPVMAAQGQHRVGTLAGVVYIVTLAGIFYAGWHITGQRFVHRESLPAAGSQNSDASDRNNDWQHYGRTAAGQRFSPLTQITPANVSQLQPAWTFHTGDNLRKGEDKAGREFNFEVTPVKVNDTLYICTPHREVIALDATTGHTRWKFDPKADTSANEYLACRGVAYSKTVDDRICPEKIITTTSDARMVALNAQTGQPCPSFGQNGFVSLTDHLGEVPPGFHFITSQPMVMEGRIVLGGWIYDNQSTGEPSGVVRAYDVNSGQLDWAWDMGRTPQNAPLKPGEVYTRGTPNGWGTYTADEKLGLIYIPLGNATPDYYGAHRRSFDEKYSSSLVALDIHTGEERWHFQTVHHDVWDFDLPVGPTLVDLPGKNGDTVPALVQTTKMGKLFLLDRRTGKPLAQVNEKPVPTSPSLPGERLSPTQPDPAGMPELSPPDLKETDMWGATPVDQLICRIQFHRYRYQGQYTPPAEGTSIAYPAFDGVMDWYGGSVDPQRHLLIANTSYIPFTMQMMKADEAVKEGLMKNWAGWGSKQSYPKPKEFAVGPEYGTPWAAVVKPWLTALGAPCSAPPWGKLVAIDLNTRKIAWERPAGTTRDMNIFGTHTNAPLPTGIFMMGGNIITRSGLIFMAATADNYLRAFDEESGQELWRARLPAGGQATPMTYIGDDGRQYVVIAAGGHGGLGTTTGDALVAYALPARGN
>NZ_CP034363.1|WP_147197746.1|2289779_2290013_+|hypothetical-protein
MLKMIKSLFASPERLLNAMSRNDVQEAKDDGERILIDEDGCASVNLNSQEVHEDFSRHVEMLKRAKRTPGGTDRAEE
>NZ_CP034363.1|WP_168199617.1|2302480_2302732_+|hypothetical-protein
MDVFNLEGRSLQLEIKIRWYGGQRYQKDVIEKNSEASSKAGADKACSADFFSQRQTGLPLFSLSHTVYHYRPDMLRDEAFSHL
>NZ_CP034363.1|WP_147197766.1|2302876_2303884_-|ABC-transporter-permease-subunit
MSSETLDHLNPARQEQPVLTPTLLLAIVAWWALAALMIVWPDKQVGFAPPRFVNETHHLFVFFASVLSVAALVSKAGLRLLADPLRRGARWLVALAVLIGIWELVTAKLALLPPPFFAPPRALIEAYATDWPRLGDSVLNSLRLLALGFLFGSLSGFVTGVAIGWSRGLGYWVHPVLRFLGPVPSTALLPLALYFFPSSFSAAIFLIALATWFPVTVLTWSGVSSVDSRYYDVARTLGASNLFLILRVAVPASLPHVFVGLFMGLGASFSVLVAAEMMGVKSGLGWYLQWAQGWAAYANMYGALIVMAVLFSSVITLLFSVRDRTLAWQRNGVKW
>NZ_CP034363.1|WP_147200595.1|2303896_2304823_-|ABC-transporter-substrate-binding-protein
MTTVKLAWGQTAVCQAPISVALQQGFFKKYGLNVEPVNFSGPTDALLQAIATGQADGGIGMALRWLKPLEQGFDVDLTVGTHGGCMRLLAPKNAGINSVKDLVGKSVAVTDQASPIRNFFAIQLAKQGIDPDKQVNWVQYPADLFGEALRKGEVQALATDDPQGWLIKHHDGLIEVDNNLNGEYKNLTCCVLGLRGSLVRDNPQVARAITQAIVDAQQWTADHPAETAKIFAPFVPGQVPIEDITAMLSEHTHHHHSTGDQLRKEVAIYVNELKTINVIRPDTDARLFAEHYVPELLPASHTQHHAMA
>NZ_CP034363.1|WP_147197768.1|2305128_2305911_+|ATP-binding-cassette-domain-containing-protein
MSVAETLSPATGLALEINNVSHAFYLEGKTLPVLDNVSLQVRPGEFVALLGPSGCGKSTLLRLVAGLEAPAAGEITEDGSALHGPDPSRVVVFQDPTLYPWRSVWRNVALGLETRGKITDEGRQRVDRILQKVGLSQFANAWPHQLSGGMAQRAALARALVNRPRLLILDEPLGKLDSLTRIRMQQELVALWRDQQFSALMVTHDVEEALLMADRVVIFSPRPARIIETIQVSLPWPRRRDDPRLIQLRTQALELLGAES
>NZ_CP034363.1|WP_147197770.1|2305922_2306975_+|pyridoxal-phosphate-dependent-enzyme
MMTIHNGLNELVGQTPLLRLNGFIRQFQLPAELIAKLEYFNPNHSIKDRIALGMVEEAERDGRLKPGMTLVDTTSGNTGIGLAAIAAAKGYKFRVYLHDKLSAERFAVLQAFGAEIIPFSQVPGFDKIIEESDGDFVAAAGWLAENVILKEPNICFTGQLTNPANPQTHYRTTGPEIWQQTAGDIDLLVASVGTGGTLSGTGRYLKEQNPAIRLIGVEPGEYSIPDIDNPDTREITGVHAFSHVLPERVPLTLDRELCDEAFAVESWQAVATAREVAASDGVLVGESSGAVLYAAREIARRPENAGKRIVAILADSGLTYLSTGLFDPTVTPEALKNAALLRHAQPEPVG
>NZ_CP034363.1|WP_147197771.1|2307020_2307860_-|VOC-family-protein
MSALAPVLDHAVINVADRLDEAATLFRRLGFQLTARGNHSLGSSNHLAVLGENYLELLGYEPGAADLRKAIWTSPPGLNGLVWKTQNADEVWQHLRERGLESDQPEQFYRPVTLPDGQEKQARFCTVRLKNGAVANGRSFFCQHLTPDAVWQHAWQRHPNGAANITDFVIAASDPFFAAEVYSQLFGAEWIKRTEGGAELAAGVARIRFLKPEAVLAEYGSLPGDFDGSPRMAALGIRTTSAERLRVSLMAGDIPFTPVNGACQVKAEHAFNLALRFWC
>NZ_CP034363.1|WP_147197773.1|2307874_2309026_-|amidohydrolase
MNFDSQLIAWRRELHQHPELSGEEFATTARIRQWLEQQAIREIDYGLKTGVVAEIGSGEALIALRADIDALPIEEATDRPFRSSTAGVMHACGHDLHSSVMLGAAQLLKAKEKQLAGRVRLLFQPAEEIFTGANQLLEAGVLQGVQAIFGMHNAPEYPLGTLRTRGGAFYANVDRFTLRVTGKGAHAARPQEGVDAIVVASSIVTALQTLPSRTYSSLESVVVSVARISGGNTWNVLPQTVELEGTVRTHNDRIRQQIPQKIRQIIDGVSAALGAQAELIWQPGPPALVNTPAWATFCLDVATDSGYRAERAELQMGGEDFAFYLQQIPGAFVSIGSASPFGLHHPGFDPDEALLAPAARYFSQLAERALANITAQTRQTTSV
>NZ_CP034363.1|WP_147197775.1|2309034_2309856_-|ATP-binding-cassette-domain-containing-protein
MSEAFELYPQHRDVRPLPETRQGRIDISNISKRYGAFTALDNVSLTIEPGTVNVILGPSGSGKSTLLRTINHLERVDEGFIQIDGEYVGYRQKGDRLYELKERAILKQRIQVGYVFQSFNLFPHLTVLDNIIEAPVVHGLFTRKQAIERAYDLLDTVGLRDKALAWPRQLSGGQQQRIAIARALALNPKVMLFDEPTSALDPELVGEVLEVIKKLAKSGVTLVVVTHEIGFARQVADRVVFMVDGKIVESGSAEQVLTRPAHHRTQRFLERVI
>NZ_CP034363.1|WP_147197777.1|2309874_2310798_-|ABC-transporter-permease-subunit
MTFKTLSRPQIASQHHARLTVVPARYPLRLLGALFSLFILLGIIESVATNPRWEWQVFAQWFFDPTILGGLGRTLLLTLLGTVFGCVIGTGLALARLSKSWLLNALAWGYIWLFRSLPLLLVLIILYNFSYLYDNLSVGIPFTSLTFFSYSTTDLLDQFSVAVLGLSLVQAAYTAEIIRGGIAGVDHGQYEAAAALGLPPSRRTFRIILPQALRAILPTGFNEVISLAKGTSIVYVLSMPELFYTVQVLYNRTQQVIPLLMVASVWYLLITTVLSVIQHYVERYFSRGVLRQSSPGRFAFFRRTARA
>NZ_CP034363.1|WP_147197779.1|2310807_2311317_-|GNAT-family-N-acetyltransferase
MIEETFVHTRPDDPLIEPIIEGLFAEYRARYGDYFGEQEEEPLDYYAPPDGAFIVLLRHETPIAMGAFKRYDAQTAELKRIWTHPSMRRQGLAQKVLLELERLAALQGYSDLFLTTGFRQPEAVRLYLAQGYLPQFDPLADPEIYSRPPYDGRLPFIKTLLTQPVQRSA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP034363_2	2.1\|867692\|32\|NZ_CP034363\|CRISPRCasFinder,CRT	867692-867723	32	NZ_CP034363.1	1265487-1265518	1	0.969

1. spacer 2.1|867692|32|NZ_CP034363|CRISPRCasFinder,CRT matches to position: 1265487-1265518, mismatch: 1, identity: 0.969

atgccgacctcgtggaatccattatcgcccgg	CRISPR spacer
atgccgaccttgtggaatccattatcgcccgg	Protospacer
**********.*********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP034363_2	2.4\|867875\|32\|NZ_CP034363\|CRISPRCasFinder,CRT,PILER-CR	867875-867906	32	CP008939	Candidatus Caedibacter acanthamoebae plasmid Plasmid_00003, complete sequence	13504-13535	8	0.75
NZ_CP034363_2	2.5\|867936\|32\|NZ_CP034363\|CRISPRCasFinder,CRT,PILER-CR	867936-867967	32	NC_016115	Streptomyces pratensis ATCC 33331 plasmid pSFLA02, complete sequence	32421-32452	9	0.719
NZ_CP034363_2	2.5\|867936\|32\|NZ_CP034363\|CRISPRCasFinder,CRT,PILER-CR	867936-867967	32	NC_016110	Streptomyces pratensis ATCC 33331 plasmid pSFLA01, complete sequence	68196-68227	9	0.719
NZ_CP034363_2	2.5\|867936\|32\|NZ_CP034363\|CRISPRCasFinder,CRT,PILER-CR	867936-867967	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	719297-719328	9	0.719

1. spacer 2.4|867875|32|NZ_CP034363|CRISPRCasFinder,CRT,PILER-CR matches to CP008939 (Candidatus Caedibacter acanthamoebae plasmid Plasmid_00003, complete sequence) position: , mismatch: 8, identity: 0.75

gatacaataataccctatcctcca------taccttcc	CRISPR spacer
gataaaataataccctattctccaacaaagta------	Protospacer
**** *************.*****      **

2. spacer 2.5|867936|32|NZ_CP034363|CRISPRCasFinder,CRT,PILER-CR matches to NC_016115 (Streptomyces pratensis ATCC 33331 plasmid pSFLA02, complete sequence) position: , mismatch: 9, identity: 0.719

---tgcatatagcccggctggcggtcgcccggtgc	CRISPR spacer
gtccgcg---ggcccggctgaccgtcgcccggtgt	Protospacer
   .**.   .*********.* ***********.

3. spacer 2.5|867936|32|NZ_CP034363|CRISPRCasFinder,CRT,PILER-CR matches to NC_016110 (Streptomyces pratensis ATCC 33331 plasmid pSFLA01, complete sequence) position: , mismatch: 9, identity: 0.719

---tgcatatagcccggctggcggtcgcccggtgc	CRISPR spacer
gtccgcg---ggcccggctgaccgtcgcccggtgt	Protospacer
   .**.   .*********.* ***********.

4. spacer 2.5|867936|32|NZ_CP034363|CRISPRCasFinder,CRT,PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 9, identity: 0.719

tgcatatagcccggctggcggtcgcccggtgc	CRISPR spacer
accatatagcccggcagccggtcgcgcagccg	Protospacer
  ************* * ******* *.*.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1179949 : 1187261

Bacillus_virus(33.33%)

protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147195795.1\|1179949_1180573_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	3.8e-64	63.4
WP_147195797.1\|1180656_1181931_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	7.3e-131	56.1
WP_147195799.1\|1182051_1182639_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A248SJ97	Salicola_phage	2.3e-26	35.4
WP_147195801.1\|1182946_1184221_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.8e-130	58.1
WP_147195804.1\|1184412_1186767_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.5e-225	53.3
WP_147195806.1\|1186988_1187261_+	DNA-binding protein HU-beta	A3E2K9	Sodalis_phage	3.5e-22	59.6

DBSCAN-SWA_2

1237450 : 1302472

Edwardsiella_phage(12.07%)

protease,terminase,holin,tRNA,integrase,tail,capsid

attL 1270815:1270839|attR 1305170:1305194

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147195895.1\|1237450_1238098_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_147195898.1\|1238068_1238755_+	ABC transporter ATP-binding protein	A0A2H4UU96	Bodo_saltans_virus	5.5e-08	27.4
WP_147195900.1\|1238751_1241169_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_147195902.1\|1241327_1241987_+	acyl-homoserine-lactone synthase	NA	NA	NA	NA
WP_147200537.1\|1241948_1242692_-	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_147195904.1\|1243113_1244193_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_147195906.1\|1244189_1244699_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_147195908.1\|1244845_1245571_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_147195910.1\|1245570_1246065_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_147195912.1\|1246298_1247687_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.4e-45	33.7
WP_147195915.1\|1247792_1248005_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_147195918.1\|1248004_1248871_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	3.1e-32	37.0
WP_147195921.1\|1249145_1250309_-\|integrase	tyrosine-type recombinase/integrase	G8C7S0	Escherichia_phage	6.6e-187	79.3
WP_147195924.1\|1250203_1250533_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_147195926.1\|1250571_1251120_-	hypothetical protein	R4W375	Alteromonas_phage	1.4e-14	29.7
WP_147195930.1\|1251341_1251551_-	hypothetical protein	A0A2H4IYB3	uncultured_Caudovirales_phage	5.9e-14	53.0
WP_147195932.1\|1251620_1251863_-	hypothetical protein	NA	NA	NA	NA
WP_147195934.1\|1252100_1252325_-	hypothetical protein	NA	NA	NA	NA
WP_147195936.1\|1252439_1253297_-	phosphoadenosine phosphosulfate reductase family protein	I6R0S6	Salmonella_phage	1.3e-139	76.1
WP_147200538.1\|1253336_1254017_-	YqaJ viral recombinase family protein	A0A0P0ZBV6	Stx2-converting_phage	1.6e-113	84.5
WP_147195938.1\|1254016_1254952_-	recombinase RecT	F1C5B8	Cronobacter_phage	2.8e-135	75.1
WP_147195940.1\|1254951_1255266_-	hypothetical protein	NA	NA	NA	NA
WP_147195942.1\|1255369_1255501_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q9AZ26	Salmonella_phage	4.7e-09	71.4
WP_147195944.1\|1255630_1255918_+	hypothetical protein	NA	NA	NA	NA
WP_147195946.1\|1255910_1256183_-	hypothetical protein	NA	NA	NA	NA
WP_147195948.1\|1256856_1257099_-	hypothetical protein	A0A077KC43	Edwardsiella_phage	1.2e-05	44.2
WP_147195950.1\|1257477_1258107_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	6.6e-32	37.9
WP_147195952.1\|1258206_1258422_+	helix-turn-helix domain-containing protein	Q716D6	Shigella_phage	2.6e-17	64.8
WP_147195953.1\|1258531_1258807_+	hypothetical protein	A0A220NRS4	Escherichia_phage	1.7e-32	83.7
WP_147195955.1\|1258841_1259672_+	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	1.4e-122	82.4
WP_147195957.1\|1259668_1260487_+	replication protein	K7PGT1	Enterobacteria_phage	3.6e-62	61.7
WP_147195959.1\|1260483_1261245_+	replication protein	A0A0F6TJ71	Escherichia_coli_O157_typing_phage	1.1e-84	59.0
WP_147195961.1\|1261305_1261680_+	DUF4884 domain-containing protein	Q333I1	Escherichia_virus	4.9e-11	52.9
WP_147195963.1\|1261676_1261955_+	hypothetical protein	NA	NA	NA	NA
WP_147195965.1\|1261951_1262131_+	hypothetical protein	NA	NA	NA	NA
WP_147195969.1\|1262134_1262581_+	hypothetical protein	A0A2I7R9W3	Vibrio_phage	9.7e-14	34.2
WP_147200539.1\|1262580_1262955_+	ASCH domain-containing protein	A0A1S6L2Y8	Erwinia_phage	2.0e-28	48.4
WP_147195973.1\|1262963_1263551_+	S-adenosylmethionine-binding protein	Q858E6	Salmonella_phage	4.2e-89	79.7
WP_147195975.1\|1263547_1263835_+	hypothetical protein	NA	NA	NA	NA
WP_147195978.1\|1263818_1263989_+	NinE family protein	I6RSI9	Salmonella_phage	4.7e-09	57.1
WP_168199597.1\|1263985_1264183_+	hypothetical protein	NA	NA	NA	NA
WP_147195982.1\|1264377_1264953_+	recombination protein NinG	A0A2R2Z332	Escherichia_phage	5.2e-36	44.9
WP_147195984.1\|1265122_1265737_+	hypothetical protein	F1C5D0	Cronobacter_phage	2.8e-35	39.2
WP_147195988.1\|1266029_1266236_-	hypothetical protein	NA	NA	NA	NA
WP_147195990.1\|1266521_1266698_+	addiction module toxin, HicA family	A0A0M3LQ86	Mannheimia_phage	2.0e-10	51.7
WP_147195992.1\|1266744_1267152_+	type II toxin-antitoxin system HicB family antitoxin	F1C593	Cronobacter_phage	5.7e-61	88.1
WP_147200540.1\|1267380_1267731_+\|holin	phage holin, lambda family	NA	NA	NA	NA
WP_147195994.1\|1267717_1268155_+	glycoside hydrolase family protein	Q5G8R3	Enterobacteria_phage	3.6e-45	61.4
WP_168199598.1\|1268443_1268740_+	peptidase	A0A1W6JP52	Morganella_phage	9.3e-05	44.6
WP_147196001.1\|1268743_1268980_+	hypothetical protein	A0A291LBC4	Klebsiella_phage	1.1e-24	67.5
WP_147196003.1\|1269254_1270142_+	hypothetical protein	NA	NA	NA	NA
WP_147196005.1\|1270149_1270401_+	hypothetical protein	NA	NA	NA	NA
WP_147196007.1\|1270390_1270771_+	hypothetical protein	NA	NA	NA	NA
1270815:1270839	attL	NA	NA	NA	NA
WP_147196009.1\|1270898_1271345_-	hypothetical protein	NA	NA	NA	NA
WP_147196011.1\|1271365_1271938_+\|terminase	terminase small subunit	A0A2H4J480	uncultured_Caudovirales_phage	3.8e-63	72.9
WP_147196014.1\|1271939_1273598_+\|terminase	phage terminase large subunit	H9C191	Pectobacterium_phage	5.4e-243	73.2
WP_147196017.1\|1273598_1275131_+	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	2.4e-104	45.6
WP_147200541.1\|1275183_1275870_+\|capsid	minor capsid protein	H9C0V1	Aeromonas_phage	2.4e-64	56.2
WP_147196020.1\|1275882_1277196_+	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	1.6e-67	41.5
WP_147196023.1\|1277199_1277685_+	hypothetical protein	A0A219YBF2	Aeromonas_phage	1.3e-32	49.4
WP_147196025.1\|1277684_1278719_+	DUF2184 domain-containing protein	Q6UJ19	Burkholderia_virus	4.3e-81	47.4
WP_147196028.1\|1278722_1279049_+	hypothetical protein	A0A1X9SFA9	Acinetobacter_phage	8.7e-12	44.1
WP_147196030.1\|1279051_1279495_+	DUF4054 domain-containing protein	Q2NPC6	Xanthomonas_phage	5.3e-20	45.6
WP_147196032.1\|1279497_1280073_+	hypothetical protein	A0A2I7QSG8	Vibrio_phage	7.9e-16	31.9
WP_147196034.1\|1280069_1280447_+	hypothetical protein	A0A077KAW7	Edwardsiella_phage	5.1e-24	45.5
WP_147200542.1\|1280554_1280983_+	hypothetical protein	A0A077KC88	Edwardsiella_phage	6.3e-10	34.2
WP_147196036.1\|1280983_1282462_+	DUF3383 family protein	I2GUE7	Acinetobacter_phage	3.2e-69	34.8
WP_147200543.1\|1282577_1282919_+	hypothetical protein	NA	NA	NA	NA
WP_147196046.1\|1282927_1283323_+	hypothetical protein	H9C0W7	Aeromonas_phage	3.5e-15	44.3
WP_147196048.1\|1283337_1283535_+	transglycosylase	H9C0W8	Aeromonas_phage	6.2e-05	48.9
WP_147196050.1\|1283534_1285385_+	hypothetical protein	A0A193GYI3	Enterobacter_phage	1.1e-18	30.9
WP_147196052.1\|1285387_1286191_+	hypothetical protein	A0A077KGW3	Edwardsiella_phage	4.5e-25	41.0
WP_147196054.1\|1286190_1286502_+	hypothetical protein	NA	NA	NA	NA
WP_147196056.1\|1286498_1287356_+	hypothetical protein	A0A077KC17	Edwardsiella_phage	2.1e-49	38.5
WP_147196058.1\|1287355_1288051_+	oxidoreductase	A0A077KAY0	Edwardsiella_phage	9.2e-35	38.0
WP_147196060.1\|1288040_1288511_-	hypothetical protein	NA	NA	NA	NA
WP_147196061.1\|1288622_1288982_+	hypothetical protein	Q6UIX8	Burkholderia_virus	4.7e-11	34.7
WP_147196063.1\|1288989_1290228_+	hypothetical protein	A0A077KGW9	Edwardsiella_phage	4.4e-104	49.8
WP_147196066.1\|1290224_1290899_+	DUF2612 domain-containing protein	A0A2R3UAM9	Myoviridae_environmental_samples	4.1e-40	38.3
WP_147196068.1\|1292207_1292636_+\|tail	tail fiber assembly protein	F1BUK2	Cronobacter_phage	1.1e-09	55.9
WP_147196070.1\|1292663_1294034_-	DUF2142 domain-containing protein	NA	NA	NA	NA
WP_147196072.1\|1294261_1294519_+	hypothetical protein	A0A1V0E5L9	Salmonella_phage	2.7e-16	53.0
WP_147196074.1\|1294868_1296083_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	5.5e-120	53.4
WP_147196077.1\|1296153_1296876_+	hypothetical protein	NA	NA	NA	NA
WP_147196079.1\|1297093_1297291_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_147200544.1\|1297290_1297710_+	hypothetical protein	A0A1W6JPH9	Morganella_phage	1.0e-28	49.7
WP_147196081.1\|1297723_1298311_+	antirepressor protein	A0A1W6JPH8	Morganella_phage	2.2e-58	59.4
WP_147200545.1\|1298442_1299018_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_147196083.1\|1299010_1299343_+	transcriptional regulator	NA	NA	NA	NA
WP_147196085.1\|1299339_1299696_+	hypothetical protein	A0A1W6JPD8	Morganella_phage	4.7e-27	52.7
WP_147196087.1\|1299688_1302472_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	4.6e-287	56.3
1305170:1305194	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1964420 : 1974022

Tupanvirus(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147197260.1\|1964420_1966349_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.0e-128	37.3
WP_071995442.1\|1966352_1966904_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	1.7e-15	32.5
WP_004157374.1\|1966998_1967196_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_147197262.1\|1967237_1967594_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_147197267.1\|1967914_1968898_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	2.2e-34	37.6
WP_147197269.1\|1968913_1971301_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	6.6e-08	27.1
WP_004157378.1\|1971305_1971605_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	5.5e-13	40.0
WP_147197271.1\|1971717_1972701_+	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_147197273.1\|1972744_1973290_+	glutathione peroxidase	A0A1S7DLQ4	Molluscum_contagiosum_virus	2.0e-13	38.2
WP_147197275.1\|1973290_1974022_+	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	2.0e-08	26.8

DBSCAN-SWA_4

2649653 : 2755307

110

Erwinia_phage(50.0%)

protease,portal,terminase,tRNA,lysis,head,plate,integrase,tail,capsid

attL 2646285:2646303|attR 2747287:2747305

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2646285:2646303	attL	NA	NA	NA	NA
WP_147198337.1\|2649653_2650355_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_147198339.1\|2650421_2652332_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	2.6e-92	33.5
WP_147198341.1\|2652439_2652736_-	hypothetical protein	NA	NA	NA	NA
WP_147198343.1\|2652787_2653207_-	DUF4186 family protein	NA	NA	NA	NA
WP_147198345.1\|2653338_2653683_+	RidA family protein	NA	NA	NA	NA
WP_147198347.1\|2653696_2654731_-	hypothetical protein	NA	NA	NA	NA
WP_147198348.1\|2654733_2654964_-	YoaH family protein	NA	NA	NA	NA
WP_147198349.1\|2655073_2656438_+	aminodeoxychorismate synthase component 1	A0A0B5J984	Pandoravirus	1.6e-43	32.3
WP_147198350.1\|2656427_2657000_+	CoA pyrophosphatase	NA	NA	NA	NA
WP_147198351.1\|2657333_2658698_+	L-serine ammonia-lyase	NA	NA	NA	NA
WP_147198352.1\|2658949_2660530_+	EAL domain-containing protein	NA	NA	NA	NA
WP_147198353.1\|2660571_2662131_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	3.6e-39	44.0
WP_147198354.1\|2662438_2663290_-	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA
WP_001062678.1\|2663451_2663661_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	1.6e-22	78.1
WP_147198355.1\|2664357_2665356_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_147198356.1\|2665377_2665647_-	hypothetical protein	NA	NA	NA	NA
WP_147198357.1\|2665884_2666121_+	hypothetical protein	NA	NA	NA	NA
WP_147198358.1\|2666156_2666948_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_147198359.1\|2667135_2668506_+	MFS transporter	NA	NA	NA	NA
WP_147198360.1\|2668602_2669484_-\|protease	protease HtpX	NA	NA	NA	NA
WP_147198361.1\|2669754_2671785_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	4.7e-87	33.9
WP_147198362.1\|2671804_2672485_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_147198363.1\|2672581_2673082_-	GAF domain-containing protein	NA	NA	NA	NA
WP_147198364.1\|2673308_2674553_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_147198365.1\|2674521_2677155_+	MCE family protein	NA	NA	NA	NA
WP_147198366.1\|2677393_2678833_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_147198367.1\|2678836_2679484_-	serine/threonine-protein phosphatase	Q8HA16	Enterobacteria_phage	8.8e-56	49.8
WP_147198368.1\|2680143_2681340_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_147198369.1\|2681536_2682991_-	xylulokinase	NA	NA	NA	NA
WP_147198370.1\|2683018_2684338_-	xylose isomerase	NA	NA	NA	NA
WP_147198371.1\|2684700_2686191_+	D-xylose transporter XylE	NA	NA	NA	NA
WP_147198372.1\|2686255_2686456_-	hypothetical protein	NA	NA	NA	NA
WP_147198373.1\|2686749_2686995_+	two-component-system connector protein YcgZ	NA	NA	NA	NA
WP_147198374.1\|2687175_2687565_+	VOC family protein	NA	NA	NA	NA
WP_147198375.1\|2687698_2689345_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.2e-10	44.8
WP_147198376.1\|2689396_2689870_-	hypothetical protein	NA	NA	NA	NA
WP_147198377.1\|2690943_2691600_+	hypothetical protein	NA	NA	NA	NA
WP_147198378.1\|2692738_2693581_-	phage repressor protein CI	Q6K1G0	Salmonella_virus	4.0e-77	49.8
WP_147198379.1\|2693695_2694097_+	hypothetical protein	NA	NA	NA	NA
WP_147198380.1\|2694128_2694518_+	hypothetical protein	A0A1S6L008	Salmonella_phage	1.9e-37	61.9
WP_147198381.1\|2694582_2694789_+	hypothetical protein	F1BUS0	Erwinia_phage	5.1e-10	52.9
WP_147198382.1\|2694994_2695186_+	hypothetical protein	F1BUR9	Erwinia_phage	5.4e-14	63.5
WP_147198383.1\|2695613_2696714_+	hypothetical protein	NA	NA	NA	NA
WP_147198384.1\|2696716_2697439_+	hypothetical protein	NA	NA	NA	NA
WP_147198385.1\|2697851_2698259_+	hypothetical protein	NA	NA	NA	NA
WP_147198386.1\|2698414_2699095_+	hypothetical protein	NA	NA	NA	NA
WP_147198387.1\|2699128_2700154_-\|portal	phage portal protein	F1BUR7	Erwinia_phage	3.6e-181	89.8
WP_147198388.1\|2700146_2700326_-	hypothetical protein	NA	NA	NA	NA
WP_147198389.1\|2700325_2702083_-\|terminase	terminase ATPase subunit family protein	F1BUR2	Erwinia_phage	0.0e+00	96.1
WP_147198390.1\|2702221_2703070_+\|capsid	GPO family capsid scaffolding protein	F1BUR1	Erwinia_phage	2.1e-113	78.1
WP_147198391.1\|2703095_2704190_+\|capsid	phage major capsid protein, P2 family	F1BUQ8	Erwinia_phage	6.0e-174	85.4
WP_147198392.1\|2704193_2704862_+\|terminase	terminase endonuclease subunit	F1BUQ7	Erwinia_phage	1.3e-91	78.8
WP_147198393.1\|2704951_2705416_+\|head	head completion/stabilization protein	F1BUQ6	Erwinia_phage	7.6e-62	77.9
WP_147198394.1\|2705412_2705616_+\|tail	phage tail protein	F1BUQ5	Erwinia_phage	7.7e-27	83.6
WP_147198395.1\|2705621_2705843_+	hypothetical protein	F1BUQ4	Erwinia_phage	1.4e-29	87.3
WP_147198396.1\|2705829_2706336_+	glycoside hydrolase family protein	A0A218M4K3	Erwinia_phage	3.0e-59	67.9
WP_147198397.1\|2706332_2706782_+\|lysis	LysB family phage lysis regulatory protein	F1BUQ1	Erwinia_phage	1.3e-50	73.8
WP_147198398.1\|2706856_2707324_+\|tail	phage tail protein	F1BUP9	Erwinia_phage	8.8e-66	81.0
WP_147198399.1\|2707320_2707767_+	phage virion morphogenesis protein	F1BUP7	Erwinia_phage	6.9e-52	74.5
WP_147198400.1\|2707772_2708333_+	hypothetical protein	NA	NA	NA	NA
WP_147198401.1\|2708341_2709670_+	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA
WP_147198402.1\|2709764_2710355_+\|plate	phage baseplate assembly protein V	F1BUP5	Erwinia_phage	2.2e-82	79.0
WP_147198403.1\|2710354_2710702_+\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	8.8e-47	79.8
WP_147198404.1\|2710703_2711612_+\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	1.0e-139	88.1
WP_147198405.1\|2711604_2712213_+\|tail	phage tail protein I	F1BUP2	Erwinia_phage	1.7e-98	83.5
WP_147198406.1\|2712209_2713274_+\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	1.1e-100	58.5
WP_147198407.1\|2713273_2713864_+\|tail	tail fiber assembly protein	K7P870	Enterobacteria_phage	5.9e-35	45.7
WP_147198408.1\|2713935_2715264_-	hypothetical protein	NA	NA	NA	NA
WP_147198409.1\|2715530_2716700_+\|tail	phage tail sheath protein	F1BUU3	Erwinia_phage	1.6e-201	90.2
WP_147198410.1\|2716712_2717222_+\|tail	phage major tail tube protein	F1BUU2	Erwinia_phage	5.4e-77	81.2
WP_147198411.1\|2717276_2717555_+\|tail	phage tail assembly protein	F1BUU0	Erwinia_phage	2.7e-30	75.6
WP_125287881.1\|2717587_2717710_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	4.8e-08	68.6
WP_147198412.1\|2717702_2720162_+\|tail	phage tail tape measure protein	S4TP64	Salmonella_phage	1.6e-166	58.8
WP_147198413.1\|2720163_2720679_+\|tail	phage tail protein	F1BUT6	Erwinia_phage	2.0e-66	79.2
WP_147198414.1\|2720675_2721839_+	phage late control D family protein	Q6K1G4	Salmonella_virus	4.2e-149	69.4
WP_147198415.1\|2721932_2722151_+	transcriptional regulator	F1BUT0	Erwinia_phage	3.9e-32	86.1
WP_147198416.1\|2722193_2722955_-	hypothetical protein	NA	NA	NA	NA
WP_147198417.1\|2723163_2724213_+\|integrase	tyrosine-type recombinase/integrase	A0A0M4S6G4	Salmonella_phage	5.3e-119	60.2
WP_147198418.1\|2724559_2724898_-	DUF2511 domain-containing protein	NA	NA	NA	NA
WP_147198419.1\|2724950_2725832_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_147198420.1\|2725833_2726199_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_147198421.1\|2726360_2726591_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.4e-16	60.3
WP_147198422.1\|2726673_2727417_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_147198423.1\|2727444_2728107_+	exodeoxyribonuclease X	NA	NA	NA	NA
WP_147200615.1\|2728103_2730167_-	prolyl oligopeptidase family serine peptidase	F2Y2S5	Organic_Lake_phycodnavirus	3.1e-14	23.3
WP_147198424.1\|2730321_2730975_-	DUF533 domain-containing protein	NA	NA	NA	NA
WP_147198425.1\|2731209_2732049_+	TIM barrel protein	NA	NA	NA	NA
WP_147198426.1\|2732186_2732558_-	DNA damage-inducible SOS regulon protein	NA	NA	NA	NA
WP_147198427.1\|2732698_2733877_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_147198428.1\|2734118_2734760_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_147198429.1\|2734979_2736455_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	7.1e-77	36.1
WP_147200616.1\|2736830_2737697_+	transcriptional regulator HexR	NA	NA	NA	NA
WP_147198430.1\|2737808_2739251_+	pyruvate kinase	NA	NA	NA	NA
WP_147198431.1\|2739377_2740613_+	MdfA family multidrug efflux MFS transporter	NA	NA	NA	NA
WP_147198432.1\|2740681_2741650_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_147198433.1\|2741781_2743113_-	murein DD-endopeptidase MepM	A0A7K9	Microcystis_virus	9.7e-17	46.3
WP_147198434.1\|2743125_2744073_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_147198435.1\|2744150_2744903_+	zinc ABC transporter ATP-binding protein ZnuC	A0A2H4PQG7	Staphylococcus_phage	4.3e-14	30.8
WP_147198436.1\|2744899_2745685_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_147198437.1\|2745822_2746827_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	1.4e-07	24.3
WP_147198438.1\|2746835_2747453_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
2747287:2747305	attR	NA	NA	NA	NA
WP_147198439.1\|2747524_2748049_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	1.0e-09	33.3
WP_147198440.1\|2748089_2748833_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_147198441.1\|2749031_2749466_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_147198442.1\|2749465_2751262_-\|tRNA	aspartate--tRNA ligase	A0A2K9L3L6	Tupanvirus	1.1e-10	27.3
WP_147198443.1\|2751539_2752103_+	hydrolase	NA	NA	NA	NA
WP_147198444.1\|2752197_2753022_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	1.2e-54	76.4
WP_147198445.1\|2753112_2753508_+	hypothetical protein	NA	NA	NA	NA
WP_147198446.1\|2753601_2754342_+	carboxy-S-adenosyl-L-methionine synthase CmoA	A0A1B0XTP2	Freshwater_phage	1.0e-15	30.6
WP_147198447.1\|2754338_2755307_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA

DBSCAN-SWA_5

2858483 : 2887372

Enterobacteria_phage(34.62%)

protease,portal,terminase,holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147198534.1\|2858483_2859263_-\|tail	tail fiber domain-containing protein	H8ZJ71	Ostreococcus_tauri_virus	5.0e-05	28.9
WP_147198535.1\|2859898_2860747_-\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	1.4e-106	72.4
WP_147198536.1\|2860758_2862063_-\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	1.2e-218	86.2
WP_147198537.1\|2862062_2863793_-\|terminase	terminase large subunit	K7PKT2	Enterobacteria_phage	7.8e-285	79.4
WP_147198538.1\|2863792_2864266_-\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	1.7e-69	77.7
WP_147198539.1\|2864440_2864821_-	HNH endonuclease	A0A1B5FP94	Escherichia_phage	1.8e-48	76.3
WP_147198540.1\|2864876_2865134_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_147198542.1\|2865648_2866572_-	hypothetical protein	H2DE35	Erwinia_phage	1.8e-25	31.1
WP_147198543.1\|2866612_2866858_-	hypothetical protein	NA	NA	NA	NA
WP_168199628.1\|2867002_2867176_-	hypothetical protein	NA	NA	NA	NA
WP_147200622.1\|2867217_2867367_+	KTSC domain-containing protein	NA	NA	NA	NA
WP_147198544.1\|2867458_2868034_-	hypothetical protein	A0A0H4IQ87	Shigella_phage	5.6e-62	63.2
WP_147198546.1\|2868476_2868911_-	Rz lytic protein	NA	NA	NA	NA
WP_147198547.1\|2868907_2869333_-	glycoside hydrolase family protein	A0A0B5KZG2	Acinetobacter_phage	5.4e-38	61.1
WP_147198548.1\|2869316_2869670_-\|holin	phage holin, lambda family	NA	NA	NA	NA
WP_147198549.1\|2870682_2871450_-	antitermination protein	K7P7B9	Enterobacteria_phage	4.8e-85	63.0
WP_147198550.1\|2871446_2872025_-	recombination protein NinG	A0A0P0ZG59	Escherichia_phage	2.8e-37	45.7
WP_147198551.1\|2872017_2872329_-	hypothetical protein	NA	NA	NA	NA
WP_147198552.1\|2872711_2873155_-	hypothetical protein	I6PD71	Cronobacter_phage	4.9e-50	62.7
WP_147198553.1\|2873402_2873705_-	hypothetical protein	NA	NA	NA	NA
WP_147198554.1\|2873908_2874115_-	hypothetical protein	A0A2H4J1E7	uncultured_Caudovirales_phage	1.2e-06	44.8
WP_147198555.1\|2874111_2874804_-	DNA replication protein	A0A077KCC8	Edwardsiella_phage	4.3e-61	54.9
WP_147198556.1\|2874800_2875751_-	replication protein	Q9ZWY3	Enterobacteria_phage	3.5e-45	67.7
WP_147198557.1\|2875747_2876578_-	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	2.8e-115	79.6
WP_147198558.1\|2876612_2876885_-	hypothetical protein	I6RSP4	Salmonella_phage	2.7e-19	66.2
WP_147198559.1\|2876995_2877199_-	Cro/Cl family transcriptional regulator	K7PLQ6	Enterobacteria_phage	1.6e-08	49.2
WP_147198560.1\|2877300_2878008_+	helix-turn-helix domain-containing protein	A4KWS0	Enterobacteria_phage	1.7e-76	62.1
WP_147198561.1\|2878117_2879242_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_147198562.1\|2879238_2879739_+	DUF4411 family protein	NA	NA	NA	NA
WP_147198563.1\|2879897_2880254_+	hypothetical protein	G0ZNF1	Cronobacter_phage	2.9e-53	89.8
WP_147198564.1\|2880644_2880893_+	hypothetical protein	NA	NA	NA	NA
WP_147198565.1\|2880973_2881291_-	hypothetical protein	NA	NA	NA	NA
WP_147198566.1\|2881535_2881877_-	anti-adapter protein IraP	NA	NA	NA	NA
WP_168199629.1\|2882103_2882271_+	hypothetical protein	NA	NA	NA	NA
WP_147198567.1\|2882267_2882555_+	host nuclease inhibitor GamL	NA	NA	NA	NA
WP_147198568.1\|2882554_2883373_+	exodeoxyribonuclease VIII	E5AGE0	Erwinia_phage	1.4e-135	81.2
WP_147198569.1\|2883369_2884293_+	recombinase RecT	A0A193GYL3	Enterobacter_phage	2.6e-114	66.9
WP_147198570.1\|2884475_2884697_+	hypothetical protein	NA	NA	NA	NA
WP_147198571.1\|2884864_2885266_+	hypothetical protein	A0A2P1MXE8	Escherichia_phage	2.4e-11	35.7
WP_147198572.1\|2885249_2885480_+	hypothetical protein	NA	NA	NA	NA
WP_147198573.1\|2885469_2885769_+	hypothetical protein	G8C7K8	Escherichia_phage	3.1e-32	64.9
WP_147198574.1\|2885805_2886054_+	DUF1233 family excisionase	Q859D3	Escherichia_coli_phage	3.5e-13	49.3
WP_147198575.1\|2886085_2887372_+	DUF3596 domain-containing protein	Q6HA01	Enterobacteria_phage	1.8e-116	51.6

DBSCAN-SWA_6

3170403 : 3186225

Enterobacteria_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147198805.1\|3170403_3173916_-	glycosyltransferase	Q854P7	Mycobacterium_phage	5.0e-12	38.5
WP_147198806.1\|3173912_3175259_-	ATP-binding cassette domain-containing protein	F2Y302	Organic_Lake_phycodnavirus	3.0e-05	25.7
WP_147198807.1\|3175248_3176067_-	ABC transporter permease	NA	NA	NA	NA
WP_147198808.1\|3176067_3176610_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	58.7
WP_147198809.1\|3176638_3177511_-	glucose-1-phosphate thymidylyltransferase RfbA	A0A291LA53	Escherichia_phage	1.1e-104	63.1
WP_147198810.1\|3177557_3178442_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.8e-25	32.6
WP_147198811.1\|3178441_3179521_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.2e-99	51.9
WP_147198812.1\|3180065_3181079_-	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	1.8e-76	45.0
WP_147198813.1\|3181126_3182023_-	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	7.4e-45	40.3
WP_147198814.1\|3182448_3183678_-	colanic acid biosynthesis glycosyltransferase WcaL	NA	NA	NA	NA
WP_147198815.1\|3184002_3186225_-	amylovoran biosynthesis protein AmsF	W8CZM5	Erwinia_phage	1.9e-126	42.2

DBSCAN-SWA_7

3691103 : 3708337

uncultured_Caudovirales_phage(65.0%)

tail,lysis,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147199240.1\|3691103_3691934_+	benzoate transporter	A7IXE3	Paramecium_bursaria_Chlorella_virus	1.1e-26	32.3
WP_147199242.1\|3691990_3692374_-	hypothetical protein	NA	NA	NA	NA
WP_147199244.1\|3692375_3693359_-	hypothetical protein	A9YX14	Burkholderia_phage	6.3e-13	51.2
WP_147199246.1\|3693361_3693928_-	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	1.2e-45	50.3
WP_147199248.1\|3693924_3695127_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	5.3e-131	63.0
WP_147199250.1\|3695126_3695477_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	1.4e-36	63.2
WP_147199252.1\|3695473_3696130_-	translation initiation factor IF-2	A0A2H4J8H6	uncultured_Caudovirales_phage	1.5e-63	66.3
WP_147199254.1\|3696182_3697205_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	3.6e-80	47.0
WP_147199256.1\|3697201_3697510_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	1.6e-20	47.4
WP_147199257.1\|3697509_3698067_-	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	3.6e-42	55.5
WP_147199260.1\|3698066_3699713_-\|tail	phage tail tape measure protein	A0A2H4J9N7	uncultured_Caudovirales_phage	8.9e-04	56.8
WP_147199261.1\|3699702_3699855_-	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	4.1e-17	80.0
WP_147199263.1\|3699890_3700316_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.9e-39	64.9
WP_147199265.1\|3700319_3700760_-	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	6.8e-44	63.7
WP_147199267.1\|3700770_3701922_-	DUF3383 family protein	A0A2H4J8G4	uncultured_Caudovirales_phage	2.0e-151	70.0
WP_147199270.1\|3701925_3702471_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	5.1e-33	40.9
WP_147199272.1\|3702502_3702946_-\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	1.5e-14	37.7
WP_147199275.1\|3703019_3704843_-	amylovoran biosynthesis protein AmsF	A0A1S6L3G8	Erwinia_phage	8.3e-136	42.3
WP_147199278.1\|3704895_3705333_-	glycoside hydrolase family protein	Q5G8R3	Enterobacteria_phage	3.0e-44	62.8
WP_147199281.1\|3705322_3705667_-\|holin	holin	NA	NA	NA	NA
WP_147199284.1\|3705828_3706608_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_147199287.1\|3707122_3707497_-	antitermination protein	B6SCZ7	Bacteriophage	2.1e-30	53.3
WP_147199289.1\|3707659_3708337_+	helix-turn-helix domain-containing protein	Q9T1U7	Acyrthosiphon_pisum_secondary_endosymbiont_phage	3.8e-54	46.4

Anti-CRISPR protein detection

Acr_ID: NZ_CP034363.1|WP_147195988.1|1266029_1266236_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP034363.1|WP_147195963.1|1261676_1261955_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP034363.1|WP_147195988.1|1266029_1266236_-|hypothetical-protein

1266029_1266236_-

68 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|72	0.5652173913043478	1	1.0

1237450-1302472

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP034363_2	Orphan	2.1\|867692\|32\|NZ_CP034363\|CRISPRCasFinder,CRT	867692-867723	32	1265487-1265518	1

1. spacer 2.1|867692|32|NZ_CP034363|CRISPRCasFinder,CRT matches to NZ_CP034363 position: 1265487-1265518, mismatch: 1

atgccgacctcgtggaatccattatcgcccgg	CRISPR spacer
atgccgaccttgtggaatccattatcgcccgg	Protospacer
**********.*********************

NZ_CP034363.1|WP_147195963.1|1261676_1261955_+|hypothetical-protein

1261676_1261955_+

92 aa aa

1237450-1302472

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP034363_2	Orphan	2.1\|867692\|32\|NZ_CP034363\|CRISPRCasFinder,CRT	867692-867723	32	1265487-1265518	1

1. spacer 2.1|867692|32|NZ_CP034363|CRISPRCasFinder,CRT matches to NZ_CP034363 position: 1265487-1265518, mismatch: 1

atgccgacctcgtggaatccattatcgcccgg	CRISPR spacer
atgccgaccttgtggaatccattatcgcccgg	Protospacer
**********.*********************

2. NZ_CP034366

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 60241

Escherichia_phage(55.88%)

portal,tail,plate,lysis,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147200766.1\|239_521_+	hypothetical protein	NA	NA	NA	NA
WP_147200767.1\|529_751_+	hypothetical protein	Q71T91	Escherichia_phage	2.2e-11	47.0
WP_147200768.1\|737_1283_+	hypothetical protein	A0A1B0V872	Salmonella_phage	3.1e-38	53.7
WP_147200769.1\|1460_1727_+	hypothetical protein	NA	NA	NA	NA
WP_147200770.1\|1726_2641_+	recombination-associated protein RdgC	Q71TA1	Escherichia_phage	1.8e-78	51.6
WP_147200771.1\|2650_5284_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1B0V7P0	Salmonella_phage	2.7e-212	47.9
WP_147200772.1\|5326_6127_+	hypothetical protein	NA	NA	NA	NA
WP_147200773.1\|6139_6733_-	hypothetical protein	NA	NA	NA	NA
WP_147200774.1\|6782_7265_-	hypothetical protein	NA	NA	NA	NA
WP_147200775.1\|7400_8204_+	hypothetical protein	NA	NA	NA	NA
WP_168199687.1\|8203_8488_+	alanine racemase	Q71TL3	Escherichia_phage	2.2e-27	59.1
WP_147200776.1\|8490_9252_+	hypothetical protein	Q71TL4	Escherichia_phage	5.7e-14	35.5
WP_147200777.1\|9248_9716_+	hypothetical protein	NA	NA	NA	NA
WP_147200778.1\|10120_11830_+	hypothetical protein	Q1MVJ5	Enterobacteria_phage	1.0e-199	59.9
WP_147200779.1\|11885_13484_+	hypothetical protein	Q1MVJ6	Enterobacteria_phage	2.6e-178	60.0
WP_147200780.1\|13494_14220_+	hypothetical protein	NA	NA	NA	NA
WP_147200781.1\|14266_14845_+	hypothetical protein	Q1MVJ8	Enterobacteria_phage	1.3e-47	51.9
WP_147200782.1\|14860_15355_+\|plate	baseplate protein	Q1MVJ9	Enterobacteria_phage	1.6e-49	59.0
WP_168199688.1\|15494_16004_-	VapA/VapB family virulence-associated protein	NA	NA	NA	NA
WP_147200784.1\|16410_16980_+	hypothetical protein	Q1MVL0	Enterobacteria_phage	1.3e-47	52.7
WP_147200785.1\|16982_17579_+\|tail	phage tail protein	Q71TN8	Escherichia_phage	4.9e-45	46.4
WP_147200786.1\|17581_18454_+	morphogenetic protein	Q71TC9	Escherichia_phage	1.8e-64	44.8
WP_147200787.1\|18542_21905_+	hypothetical protein	A0A222YXR4	Escherichia_phage	2.6e-74	38.5
WP_147200788.1\|21913_22258_+	hypothetical protein	Q71TP1	Escherichia_phage	6.1e-24	47.7
WP_147200789.1\|22257_23682_+	bleomycin hydrolase	Q71TP2	Escherichia_phage	1.9e-151	58.5
WP_147200790.1\|23692_24802_+\|tail	phage tail protein	A0A077SLH5	Escherichia_phage	1.1e-63	53.8
WP_147200791.1\|24798_25236_+\|tail	phage tail protein	Q71TD4	Escherichia_phage	1.5e-27	48.9
WP_147200862.1\|25970_26477_+\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	1.5e-31	50.3
WP_147200792.1\|26476_27082_+\|tail	tail fiber assembly protein	Q9MCR5	Enterobacteria_phage	6.3e-48	53.6
WP_147200863.1\|27526_27694_+	LydA	NA	NA	NA	NA
WP_147200793.1\|27690_28131_+\|lysis	lysis protein	A0A077SK09	Escherichia_phage	2.2e-26	42.9
WP_147200794.1\|28123_28759_+	odaE	A0A222YXB2	Escherichia_phage	6.0e-17	34.4
WP_147200795.1\|28748_31865_+	hypothetical protein	A0A1B0V7H1	Salmonella_phage	9.9e-12	55.4
WP_147200796.1\|31861_32254_+	ddrA	NA	NA	NA	NA
WP_147200797.1\|32305_33913_+	hypothetical protein	A0A1B0VFX4	Salmonella_phage	5.1e-20	30.1
WP_147200798.1\|33912_34242_+	hypothetical protein	NA	NA	NA	NA
WP_147200799.1\|34272_34599_-	hypothetical protein	NA	NA	NA	NA
WP_147200800.1\|34804_35290_+	glycoside hydrolase family protein	S4TUB1	Salmonella_phage	1.7e-56	66.2
WP_147200801.1\|35613_36501_+	protein RepA	J9Q7H0	Salmonella_phage	1.0e-70	49.0
WP_147200802.1\|37162_38425_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_147200803.1\|38421_39312_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_147200804.1\|39308_40376_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_168199689.1\|40383_41502_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_147200864.1\|41556_42207_-	iron-containing redox enzyme family protein	NA	NA	NA	NA
WP_168199690.1\|42281_43211_-	EamA family transporter	NA	NA	NA	NA
WP_147200807.1\|44058_44607_-	hypothetical protein	NA	NA	NA	NA
WP_147200808.1\|44621_45596_-	hypothetical protein	NA	NA	NA	NA
WP_168199691.1\|45592_45748_-	hypothetical protein	NA	NA	NA	NA
WP_147200809.1\|45994_47044_-\|head	head processing protein	Q71TR6	Escherichia_phage	1.0e-77	46.4
WP_147200810.1\|47054_48767_-\|portal	phage portal protein	Q71TR7	Escherichia_phage	3.8e-167	55.0
WP_147200811.1\|48842_55610_+	N-6 DNA methylase	A0A077SK04	Escherichia_phage	0.0e+00	46.7
WP_147200812.1\|55654_56083_+	olxA	A0A222YZ35	Escherichia_phage	9.3e-30	49.3
WP_147200813.1\|56093_56357_+	hypothetical protein	NA	NA	NA	NA
WP_168199692.1\|56538_56709_+	hypothetical protein	NA	NA	NA	NA
WP_147200814.1\|56764_57007_+	HigA family addiction module antidote protein	NA	NA	NA	NA
WP_147200815.1\|57026_57272_+	hypothetical protein	NA	NA	NA	NA
WP_147200816.1\|57255_57846_+	VRR-NUC domain-containing protein	A0A1B0VBR8	Salmonella_phage	1.2e-32	52.1
WP_147200817.1\|57983_58388_+	hypothetical protein	NA	NA	NA	NA
WP_147200818.1\|58434_58983_+	norphogenetic protein	Q1MVG9	Enterobacteria_phage	2.2e-47	47.8
WP_147200819.1\|58943_59546_+	norphogenetic protein	A0A077SK52	Escherichia_phage	7.6e-70	65.9
WP_147200865.1\|59542_60241_+	hypothetical protein	A0A077SLK3	Escherichia_phage	2.8e-68	56.5

DBSCAN-SWA_2

65266 : 85684

Escherichia_phage(41.67%)

terminase,integrase

attL 69105:69121|attR 88239:88255

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147200826.1\|65266_65689_+	hypothetical protein	A9YWV9	Burkholderia_phage	6.6e-36	59.5
WP_168199694.1\|65688_65844_+	hypothetical protein	NA	NA	NA	NA
WP_147200827.1\|66200_66599_+	hypothetical protein	A0A077SLR3	Escherichia_phage	1.8e-11	39.4
WP_147200828.1\|66583_67354_+	hypothetical protein	NA	NA	NA	NA
WP_147200866.1\|67678_67909_+	hypothetical protein	H6WRY1	Salmonella_phage	2.5e-21	68.4
WP_147200829.1\|67924_68152_-	hypothetical protein	NA	NA	NA	NA
WP_147200830.1\|68148_68934_-	hypothetical protein	NA	NA	NA	NA
69105:69121	attL	NA	NA	NA	NA
WP_147200831.1\|69195_70266_+	hypothetical protein	NA	NA	NA	NA
WP_147200832.1\|70265_70475_+	hypothetical protein	NA	NA	NA	NA
WP_168199695.1\|70555_70714_+	hypothetical protein	NA	NA	NA	NA
WP_147200833.1\|70749_71028_+	hypothetical protein	H6W8B9	Escherichia_phage	1.4e-05	39.4
WP_168199696.1\|71030_71204_+	hypothetical protein	NA	NA	NA	NA
WP_168199697.1\|71203_71374_+	hypothetical protein	NA	NA	NA	NA
WP_147200834.1\|71525_72296_+	hypothetical protein	NA	NA	NA	NA
WP_147200835.1\|72763_73192_+	translesion error-prone DNA polymerase V autoproteolytic subunit	F1C5A6	Cronobacter_phage	1.9e-27	52.2
WP_147200867.1\|73195_74470_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	9.5e-147	60.9
WP_147200836.1\|74710_74971_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5NR91	Burkholderia_phage	1.6e-08	41.9
WP_147200837.1\|75138_75513_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_147200838.1\|75514_76156_+	hypothetical protein	NA	NA	NA	NA
WP_147200839.1\|76799_77297_-	hypothetical protein	NA	NA	NA	NA
WP_147200840.1\|77298_78393_-	ParM/StbA family protein	A0A222YXF2	Escherichia_phage	4.5e-12	23.6
WP_147200841.1\|78599_79787_+	hypothetical protein	Q5QBP3	Enterobacteria_phage	8.1e-23	25.8
WP_147200842.1\|79767_81264_+\|terminase	terminase	A0A077SK57	Escherichia_phage	1.5e-188	64.2
WP_147200843.1\|81282_82155_-	hypothetical protein	NA	NA	NA	NA
WP_168199698.1\|83069_83396_+	hypothetical protein	P79672	Haemophilus_phage	9.3e-06	32.1
WP_147200845.1\|83940_84198_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_147200846.1\|84401_84635_+	hypothetical protein	NA	NA	NA	NA
WP_168199699.1\|84655_85684_+\|integrase	tyrosine-type recombinase/integrase	A0A077SLE7	Escherichia_phage	1.6e-75	42.9
88239:88255	attR	NA	NA	NA	NA

DBSCAN-SWA_3

90024 : 95204

Escherichia_phage(50.0%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_147200855.1\|90024_90669_+	recombinase	Q5QBN4	Enterobacteria_phage	2.2e-38	62.5
WP_147200856.1\|91045_91504_+	hypothetical protein	A0A218M4J4	Erwinia_phage	8.5e-05	32.9
WP_147200857.1\|91497_91824_+	DUF1493 family protein	NA	NA	NA	NA
WP_147200858.1\|92232_92877_+	maturation control protein	Q71TG2	Escherichia_phage	9.7e-47	43.5
WP_147200868.1\|92960_93230_+	hypothetical protein	Q38620	Escherichia_phage	1.5e-17	54.9
WP_147200869.1\|93225_94434_+\|tail	phage tail protein	Q1MVH4	Enterobacteria_phage	2.3e-89	57.7
WP_147200870.1\|94949_95204_+\|tail	phage tail protein	Q71TJ9	Escherichia_phage	2.0e-24	59.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP034363

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

2. NZ_CP034366

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection